Guide to the Human Genome
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Name: SLC2A4 Sequence: fasta or formatted (509aa) NCBI GI: 4507011
Description:

glucose transporter 4

Referenced in:

Solute Carrier Families

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.6         44           3
 C cysteine            0.6          3           1
 D aspartate           1.2          6           1
 E glutamate           5.1         26           1
 F phenylalanine       5.3         27           2
 G glycine            10.4         53           2
 H histidine           0.8          4           1
 I isoleucine          6.7         34           2
 K lysine              1.6          8           1
 L leucine            15.5         79           4
 M methionine          2.4         12           1
 N asparagine          2.6         13           2
 P proline             5.9         30           2
 Q glutamine           4.5         23           2
 R arginine            4.5         23           2
 S serine              7.1         36           2
 T threonine           5.1         26           2
 V valine              8.1         41           2
 W tryptophan          1.4          7           1
 Y tyrosine            2.8         14           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   glucose transporter 4 
SLC2A1                0.637   solute carrier family 2 (facilitated glucose transp...
SLC2A3                0.552   solute carrier family 2 (facilitated glucose transpor...
SLC2A14               0.534   glucose transporter 14 
SLC2A2                0.512   solute carrier family 2 (facilitated glucose transpor...
SLC2A5                0.374   solute carrier family 2 (facilitated glucose/fructose...
SLC2A7                0.369   intestinal facilitative glucose transporter 7 [Homo...
SLC2A9                0.325   solute carrier family 2, member 9 protein isoform 2 ...
SLC2A9                0.325   solute carrier family 2, member 9 protein isoform 1 ...
SLC2A11               0.300   glucose transporter protein 10 isoform a 
SLC2A11               0.297   glucose transporter protein 10 isoform c 
SLC2A11               0.297   glucose transporter protein 10 isoform b 
SLC2A8                0.172   solute carrier family 2 (facilitated glucose transpo...
SLC2A6                0.141   solute carrier family 2 (facilitated glucose transp...
SLC2A5                0.140   solute carrier family 2 (facilitated glucose/fructo...
SLC2A6                0.134   solute carrier family 2 (facilitated glucose transp...
SLC2A13               0.131   solute carrier family 2 (facilitated glucose transp...
SLC2A12               0.109   solute carrier family 2 (facilitated glucose transpo...
SLC2A10               0.086   solute carrier family 2 member 10 
SLC22A23              0.036   solute carrier family 22, member 23 isoform a [Homo...
SLC22A7               0.033   solute carrier family 22 member 7 isoform a 
SLC22A8               0.032   solute carrier family 22 member 8 
SLC22A7               0.032   solute carrier family 22 member 7 isoform b 
SVOPL                 0.031   SVOP-like isoform 1 
SLC22A5               0.027   solute carrier family 22 member 5 
SLC22A4               0.026   solute carrier family 22 member 4 
SLC22A15              0.025   solute carrier family 22, member 15 
SLC22A3               0.025   solute carrier family 22 member 3 
SLC22A2               0.025   solute carrier family 22 member 2 
SVOP                  0.025   SV2 related protein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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