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Name: LOC148003 Sequence: fasta or formatted (172aa) NCBI GI: 169214331
Description:

PREDICTED: similar to lectin, galactoside-binding, soluble, 14

Referenced in:

Lectin Families

Other entries for this name:
alt prot [172aa] PREDICTED: similar to lectin, galactoside-binding, soluble, 14
alt prot [142aa] PREDICTED: similar to lectin, galactoside-binding, soluble, 14 is...
alt mRNA [172aa] PREDICTED: similar to lectin, galactoside-binding, soluble, 14 is...
alt prot [142aa] PREDICTED: similar to lectin, galactoside-binding, soluble, 14 is...
alt prot [142aa] PREDICTED: similar to lectin, galactoside-binding, soluble, 14 is...
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             1.7          3           1
 C cysteine            2.9          5           1
 D aspartate           4.1          7           1
 E glutamate           7.0         12           2
 F phenylalanine       4.1          7           1
 G glycine             5.2          9           1
 H histidine           4.7          8           1
 I isoleucine          6.4         11           2
 K lysine              3.5          6           1
 L leucine             9.9         17           1
 M methionine          3.5          6           1
 N asparagine          5.2          9           2
 P proline             5.2          9           2
 Q glutamine           1.7          3           1
 R arginine            7.0         12           2
 S serine              7.0         12           2
 T threonine           1.7          3           1
 V valine             12.2         21           2
 W tryptophan          1.7          3           1
 Y tyrosine            5.2          9           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: similar to lectin, galactoside-binding, ... 
LOC148003             1.000   PREDICTED: similar to lectin, galactoside-binding, ...
LOC148003             0.988   PREDICTED: similar to lectin, galactoside-binding, ...
LOC148003             0.774   PREDICTED: similar to lectin, galactoside-binding, ...
LOC148003             0.774   PREDICTED: similar to lectin, galactoside-binding, s...
LOC148003             0.759   PREDICTED: similar to lectin, galactoside-binding, s...
LGALS14               0.634   lectin, galactoside-binding, soluble, 14 isoform 2 [...
LGALS13               0.539   galectin-13 
LGALS14               0.440   lectin, galactoside-binding, soluble, 14 isoform 1 [H...
CLC                   0.354   Charcot-Leyden crystal protein 
LOC400696             0.274   hypothetical protein LOC400696 
LGALS9B               0.131   galectin-9 like 
LGALS9                0.128   galectin-9 isoform long 
LGALS4                0.125   galectin-4 
LGALS9C               0.125   galectin 9 like 
LGALS9                0.119   galectin-9 isoform short 
LGALS7                0.119   galectin-7 
LGALS7B               0.119   galectin-7B 
LGALS8                0.092   galectin-8 isoform a 
LGALS8                0.092   galectin-8 isoform b 
LGALS8                0.092   galectin-8 isoform b 
LGALS8                0.092   galectin-8 isoform a 
LGALS3                0.074   galectin 3 
LGALS12               0.071   lectin, galactoside-binding, soluble, 12 isoform 3 ...
LGALS12               0.071   lectin, galactoside-binding, soluble, 12 isoform 2 [...
LGALS12               0.065   lectin, galactoside-binding, soluble, 12 isoform 1 ...
LGALS12               0.057   lectin, galactoside-binding, soluble, 12 isoform 5 ...
LGALS12               0.057   lectin, galactoside-binding, soluble, 12 isoform 4 ...
HSPC159               0.030   hypothetical protein LOC29094 
LGALS1                0.015   galectin-1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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