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Name: LGALS13 Sequence: fasta or formatted (139aa) NCBI GI: 7019497
Description:

galectin-13

Referenced in:

Lectin Families
Ovary, Uterus and Placenta

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             0.7          1           1
 C cysteine            2.9          4           1
 D aspartate           6.5          9           1
 E glutamate           5.8          8           2
 F phenylalanine       7.2         10           1
 G glycine             5.0          7           1
 H histidine           3.6          5           1
 I isoleucine          8.6         12           2
 K lysine              3.6          5           1
 L leucine             5.0          7           1
 M methionine          3.6          5           1
 N asparagine          4.3          6           1
 P proline             5.8          8           2
 Q glutamine           2.9          4           1
 R arginine            5.0          7           2
 S serine              7.9         11           2
 T threonine           3.6          5           2
 V valine             12.2         17           2
 W tryptophan          0.7          1           1
 Y tyrosine            5.0          7           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   galectin-13 
LOC148003             0.695   PREDICTED: similar to lectin, galactoside-binding, ...
LOC148003             0.695   PREDICTED: similar to lectin, galactoside-binding, s...
LOC148003             0.692   PREDICTED: similar to lectin, galactoside-binding, s...
LOC148003             0.680   PREDICTED: similar to lectin, galactoside-binding, ...
LOC148003             0.680   PREDICTED: similar to lectin, galactoside-binding, ...
LOC148003             0.677   PREDICTED: similar to lectin, galactoside-binding, ...
LGALS14               0.647   lectin, galactoside-binding, soluble, 14 isoform 1 [H...
LGALS14               0.613   lectin, galactoside-binding, soluble, 14 isoform 2 [...
CLC                   0.459   Charcot-Leyden crystal protein 
LOC400696             0.395   hypothetical protein LOC400696 
LGALS4                0.177   galectin-4 
LGALS9                0.169   galectin-9 isoform long 
LGALS9                0.165   galectin-9 isoform short 
LGALS9B               0.154   galectin-9 like 
LGALS9C               0.154   galectin 9 like 
LGALS7                0.135   galectin-7 
LGALS7B               0.135   galectin-7B 
LGALS8                0.098   galectin-8 isoform a 
LGALS8                0.098   galectin-8 isoform b 
LGALS8                0.098   galectin-8 isoform b 
LGALS8                0.098   galectin-8 isoform a 
LGALS3                0.098   galectin 3 
LGALS12               0.075   lectin, galactoside-binding, soluble, 12 isoform 3 ...
LGALS12               0.075   lectin, galactoside-binding, soluble, 12 isoform 1 ...
LGALS12               0.075   lectin, galactoside-binding, soluble, 12 isoform 2 [...
LGALS12               0.064   lectin, galactoside-binding, soluble, 12 isoform 5 ...
LGALS12               0.064   lectin, galactoside-binding, soluble, 12 isoform 4 ...
LGALS1                0.030   galectin-1 
HSPC159               0.026   hypothetical protein LOC29094 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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