Guide to the Human Genome
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Name: HBS1L Sequence: fasta or formatted (632aa) NCBI GI: 223633995
Description:

Hsp70 subfamily B suppressor 1-like protein isoform 3

Referenced in:

Translation Factors

Other entries for this name:
alt prot [642aa] Hsp70 subfamily B suppressor 1-like protein isoform 2
alt prot [684aa] Hsp70 subfamily B suppressor 1-like protein isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.4         34           2
 C cysteine            1.9         12           1
 D aspartate           7.8         49           3
 E glutamate           6.0         38           2
 F phenylalanine       4.0         25           1
 G glycine             2.8         18           1
 H histidine           1.9         12           1
 I isoleucine          4.0         25           3
 K lysine              8.1         51           3
 L leucine            10.9         69           2
 M methionine          0.6          4           1
 N asparagine          6.2         39           2
 P proline             4.7         30           2
 Q glutamine           4.0         25           1
 R arginine            3.8         24           2
 S serine             15.3         97           3
 T threonine           4.4         28           2
 V valine              5.5         35           2
 W tryptophan          0.2          1           1
 Y tyrosine            2.5         16           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   Hsp70 subfamily B suppressor 1-like protein isoform... 
HBS1L                 0.219   Hsp70 subfamily B suppressor 1-like protein isoform 1...
HBS1L                 0.133   Hsp70 subfamily B suppressor 1-like protein isoform...
DSPP                  0.015   dentin sialophosphoprotein preproprotein 
PCLO                  0.012   piccolo isoform 2 
PCLO                  0.012   piccolo isoform 1 
CCDC18                0.012   sarcoma antigen NY-SAR-41 
ATXN7L1               0.012   ataxin 7-like 1 isoform 1 
ATXN7L1               0.012   ataxin 7-like 1 isoform 3 
ZNF839                0.008   zinc finger protein 839 
ANKRD20A3             0.007   ankyrin repeat domain 20 family, member A3 
ANKRD20A2             0.007   ankyrin repeat domain 20 family, member A2 
ANKRD20A1             0.007   ankyrin repeat domain 20 family, member A1 
ANKRD20A4             0.007   ankyrin repeat domain 20 family, member A4 
LHX2                  0.007   LIM homeobox protein 2 
IL23R                 0.006   interleukin 23 receptor precursor 
ZNF423                0.006   zinc finger protein 423 
KIF16B                0.006   kinesin-like motor protein C20orf23 
ZCCHC2                0.006   zinc finger, CCHC domain containing 2 
CCDC88A               0.006   coiled-coil domain containing 88A isoform 2 
CCDC88A               0.006   coiled-coil domain containing 88A isoform 1 
UBE4B                 0.006   ubiquitination factor E4B isoform 2 
UBE4B                 0.006   ubiquitination factor E4B isoform 1 
BRCA1                 0.006   breast cancer 1, early onset isoform 2 
TLR8                  0.006   toll-like receptor 8 
BRCA1                 0.006   breast cancer 1, early onset isoform 3 
BRCA1                 0.006   breast cancer 1, early onset isoform 1 
UTRN                  0.006   utrophin 
ANAPC1                0.006   anaphase promoting complex subunit 1 
KRT26                 0.006   keratin 26 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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