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Search of human proteins with 223278366
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|223278366 protein associated with topoisomerase II homolog 2
[Homo sapiens]
(543 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|223278366 protein associated with topoisomerase II homolog 2 ... 1100 0.0
gi|189217919 protein associated with topoisomerase II homolog 1 ... 267 2e-71
gi|17975763 myelin transcription factor 1 [Homo sapiens] 45 1e-04
gi|155030232 proline, glutamic acid and leucine rich protein 1 [... 45 2e-04
gi|86262149 zinc finger and BTB domain containing 7C [Homo sapiens] 44 5e-04
gi|56711320 hypothetical protein LOC145407 [Homo sapiens] 44 5e-04
gi|94536805 splicing factor YT521-B isoform 2 [Homo sapiens] 43 6e-04
gi|72534750 splicing factor YT521-B isoform 1 [Homo sapiens] 43 6e-04
gi|100816397 MYST histone acetyltransferase (monocytic leukemia)... 42 0.001
gi|210032580 SET domain containing 1B [Homo sapiens] 42 0.001
gi|45331217 zinc finger protein 526 [Homo sapiens] 42 0.001
gi|94536860 hypothetical protein LOC138724 isoform B [Homo sapiens] 42 0.001
gi|22035677 AT rich interactive domain 4B isoform 1 [Homo sapiens] 42 0.001
gi|4758178 dynein, cytoplasmic 1, intermediate chain 1 isoform a... 42 0.002
gi|55953110 retinoblastoma protein-binding zinc finger protein i... 42 0.002
gi|20336260 retinoblastoma protein-binding zinc finger protein i... 42 0.002
gi|20336258 retinoblastoma protein-binding zinc finger protein i... 42 0.002
gi|169210053 PREDICTED: hypothetical protein [Homo sapiens] 41 0.002
gi|239744307 PREDICTED: similar to hCG1991922 [Homo sapiens] 41 0.002
gi|4885193 AT rich interactive domain 3A (BRIGHT- like) protein ... 41 0.002
gi|58761548 tau tubulin kinase 1 [Homo sapiens] 41 0.002
gi|158420731 chromodomain helicase DNA binding protein 3 isoform... 41 0.003
gi|48255889 protein kinase C substrate 80K-H isoform 1 [Homo sap... 40 0.004
gi|239749996 PREDICTED: similar to hCG1991922 [Homo sapiens] 40 0.005
gi|195546902 suppressor of Ty 5 homolog isoform b [Homo sapiens] 40 0.005
gi|195546900 suppressor of Ty 5 homolog isoform a [Homo sapiens] 40 0.005
gi|161169023 suppressor of Ty 5 homolog isoform a [Homo sapiens] 40 0.005
gi|20149524 suppressor of Ty 5 homolog isoform a [Homo sapiens] 40 0.005
gi|57242757 calsyntenin 1 isoform 1 [Homo sapiens] 40 0.005
gi|57242755 calsyntenin 1 isoform 2 [Homo sapiens] 40 0.005
>gi|223278366 protein associated with topoisomerase II homolog 2
[Homo sapiens]
Length = 543
Score = 1100 bits (2846), Expect = 0.0
Identities = 543/543 (100%), Positives = 543/543 (100%)
Query: 1 MNCLEGPGKTCGPLASEEELVSACQLEKEEENEGEEEEEEEDEEDLDPDLDPDLEEEEND 60
MNCLEGPGKTCGPLASEEELVSACQLEKEEENEGEEEEEEEDEEDLDPDLDPDLEEEEND
Sbjct: 1 MNCLEGPGKTCGPLASEEELVSACQLEKEEENEGEEEEEEEDEEDLDPDLDPDLEEEEND 60
Query: 61 LGDPAVLGAVHNTQRALLSSPGVKAPGMLGMSLASLHFLWQTLDYLSPIPFWPTFPSTSS 120
LGDPAVLGAVHNTQRALLSSPGVKAPGMLGMSLASLHFLWQTLDYLSPIPFWPTFPSTSS
Sbjct: 61 LGDPAVLGAVHNTQRALLSSPGVKAPGMLGMSLASLHFLWQTLDYLSPIPFWPTFPSTSS 120
Query: 121 PAQHFGPRLPSPDPTLFCSLLTSWPPRFSHLTQLHPRHQRILQQQQHSQTPSPPAKKPWS 180
PAQHFGPRLPSPDPTLFCSLLTSWPPRFSHLTQLHPRHQRILQQQQHSQTPSPPAKKPWS
Sbjct: 121 PAQHFGPRLPSPDPTLFCSLLTSWPPRFSHLTQLHPRHQRILQQQQHSQTPSPPAKKPWS 180
Query: 181 QQPDPYANLMTRKEKDWVIKVQMVQLQSAKPRLDDYYYQEYYQKLEKKQADEELLGRRNR 240
QQPDPYANLMTRKEKDWVIKVQMVQLQSAKPRLDDYYYQEYYQKLEKKQADEELLGRRNR
Sbjct: 181 QQPDPYANLMTRKEKDWVIKVQMVQLQSAKPRLDDYYYQEYYQKLEKKQADEELLGRRNR 240
Query: 241 VESLKLVTPYIPKAEAYESVVRIEGSLGQVAVSTCFSPRRAIDAVPHGTQEQDIEAASSQ 300
VESLKLVTPYIPKAEAYESVVRIEGSLGQVAVSTCFSPRRAIDAVPHGTQEQDIEAASSQ
Sbjct: 241 VESLKLVTPYIPKAEAYESVVRIEGSLGQVAVSTCFSPRRAIDAVPHGTQEQDIEAASSQ 300
Query: 301 RLRVLYRIEKMFLQLLEIEEGWKYRPPPPCFSEQQSNQVEKLFQTLKTQEQNNLEEAADG 360
RLRVLYRIEKMFLQLLEIEEGWKYRPPPPCFSEQQSNQVEKLFQTLKTQEQNNLEEAADG
Sbjct: 301 RLRVLYRIEKMFLQLLEIEEGWKYRPPPPCFSEQQSNQVEKLFQTLKTQEQNNLEEAADG 360
Query: 361 FLQVLSVRKGKALVARLLPFLPQDQAVTILLAITHHLPLLVRRDVADQALQMLFKPLGKC 420
FLQVLSVRKGKALVARLLPFLPQDQAVTILLAITHHLPLLVRRDVADQALQMLFKPLGKC
Sbjct: 361 FLQVLSVRKGKALVARLLPFLPQDQAVTILLAITHHLPLLVRRDVADQALQMLFKPLGKC 420
Query: 421 ISHLTLHELLQGLQGLTLLPPGSSERPVTVVLQNQFGISLLYALLSHGEQLVSLHSSLEE 480
ISHLTLHELLQGLQGLTLLPPGSSERPVTVVLQNQFGISLLYALLSHGEQLVSLHSSLEE
Sbjct: 421 ISHLTLHELLQGLQGLTLLPPGSSERPVTVVLQNQFGISLLYALLSHGEQLVSLHSSLEE 480
Query: 481 PNSDHTAWTDMVVLIAWEIAQMPTASLAEPLAFPSNLLPLFCHHVDKQLVQQLEARMEFA 540
PNSDHTAWTDMVVLIAWEIAQMPTASLAEPLAFPSNLLPLFCHHVDKQLVQQLEARMEFA
Sbjct: 481 PNSDHTAWTDMVVLIAWEIAQMPTASLAEPLAFPSNLLPLFCHHVDKQLVQQLEARMEFA 540
Query: 541 WIY 543
WIY
Sbjct: 541 WIY 543
>gi|189217919 protein associated with topoisomerase II homolog 1
[Homo sapiens]
Length = 770
Score = 267 bits (683), Expect = 2e-71
Identities = 175/506 (34%), Positives = 267/506 (52%), Gaps = 40/506 (7%)
Query: 66 VLGAVHNTQRALLSSPGVKAPGMLGMSLASLH---FLWQTLDYLSPIPFWPTF----PST 118
+LG + S + PG +G LA+++ + L P P + F PS
Sbjct: 266 LLGGAQLQPGRMSPSQFARVPGFVGSPLAAMNPKLLQGRVGQMLPPAPGFRAFFSAPPSA 325
Query: 119 SSPAQHFGPRLPSPDPTLFCSLLTSWPPRFS-HLTQLHPRHQRIL---QQQQHSQ----- 169
+ P Q P P P L L S P F T LHP+H+R+L QQQ SQ
Sbjct: 326 TPPPQQHPP---GPGPHL--QNLRSQAPMFRPDTTHLHPQHRRLLHQRQQQNRSQHRNLN 380
Query: 170 ----TPSPPAKKPWSQQPDPYANLMTRKEKDWVIKVQMVQLQSAKPRLDDYYYQEYYQKL 225
S + + DPYANLM ++EKDWV K+QM+QLQS P LDD+YYQ Y++KL
Sbjct: 381 GAGDRGSHRSSHQDHLRKDPYANLMLQREKDWVSKIQMMQLQSTDPYLDDFYYQNYFEKL 440
Query: 226 EKKQADEELLGRRNRVESLKLVTPYIPKAEAYESVVRIEGSLGQVAVSTCFSPRRAIDAV 285
EK A EE+ G + E KL+TP + K E V+ EGSLG++ VS+ +PR+ IDAV
Sbjct: 441 EKLSAAEEIQGDGPKKERTKLITPQVAKLEHAYKPVQFEGSLGKLTVSSVNNPRKMIDAV 500
Query: 286 PHGTQEQD---IEAASSQRLRVLYRIEKMFLQLLEIEEGWK-----YRPPPPCFSEQQSN 337
E D + +R + L IEK + LL++E+ + P + + +
Sbjct: 501 VTSRSEDDETKEKQVRDKRRKTLVIIEKTYSLLLDVEDYERRYLLSLEEERPALMDDRKH 560
Query: 338 QVEKLFQTLKTQEQNNLEEAADGFLQVLSVRKGKALVARLLPFLPQDQAVTILLAITHHL 397
++ ++ L+ + + D F+Q++ +RKGK +VAR+LPFL +QA IL+ +L
Sbjct: 561 KICSMYDNLRGKLPGQERPSDDHFVQIMCIRKGKRMVARILPFLSTEQAADILMTTARNL 620
Query: 398 PLLVRRDVADQALQMLFKPLGKCISHLTLHELLQGLQGLTLLP-----PGSSERPVTVVL 452
P L+++D D+ L L P + HL + L+ L LP P S +T VL
Sbjct: 621 PFLIKKDAQDEVLPCLLSPFSLLLYHLPSVSITSLLRQLMNLPQSAATPALSNPHLTAVL 680
Query: 453 QNQFGISLLYALLSHGEQLVSLHSSLEEPNSDHTAWTDMVVLIAWEIAQMPTASLAEPLA 512
QN+FG+SLL LLS GE L S + E ++ + WT+++ + E+ ++P A+LA+P++
Sbjct: 681 QNKFGLSLLLILLSRGEDLQSSDPATE--STQNNQWTEVMFMATRELLRIPQAALAKPIS 738
Query: 513 FPSNLLPLFCHHVDKQLVQQLEARME 538
P+NL+ LF +VD+Q + LE +++
Sbjct: 739 IPTNLVSLFSRYVDRQKLNLLETKLQ 764
>gi|17975763 myelin transcription factor 1 [Homo sapiens]
Length = 1121
Score = 45.4 bits (106), Expect = 1e-04
Identities = 24/70 (34%), Positives = 40/70 (57%)
Query: 17 EEELVSACQLEKEEENEGEEEEEEEDEEDLDPDLDPDLEEEENDLGDPAVLGAVHNTQRA 76
EEE + E++EE E EEEEEEE+EE+ + + + + EEEE + P V+ + +
Sbjct: 262 EEEEEEEEEEEEDEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEAAPDVIFQEDTSHTS 321
Query: 77 LLSSPGVKAP 86
+P ++ P
Sbjct: 322 AQKAPELRGP 331
Score = 43.9 bits (102), Expect = 4e-04
Identities = 24/56 (42%), Positives = 35/56 (62%)
Query: 5 EGPGKTCGPLASEEELVSACQLEKEEENEGEEEEEEEDEEDLDPDLDPDLEEEEND 60
E K G L+ EEE + E+EEE + EEEEEEE+EE+ + + + + EEEE +
Sbjct: 246 EESSKQKGILSHEEEDEEEEEEEEEEEEDEEEEEEEEEEEEEEEEEEEEEEEEEEE 301
Score = 43.5 bits (101), Expect = 5e-04
Identities = 23/46 (50%), Positives = 30/46 (65%)
Query: 15 ASEEELVSACQLEKEEENEGEEEEEEEDEEDLDPDLDPDLEEEEND 60
ASEE L EEE+E EEEEEEE+EED + + + + EEEE +
Sbjct: 244 ASEESSKQKGILSHEEEDEEEEEEEEEEEEDEEEEEEEEEEEEEEE 289
Score = 29.6 bits (65), Expect = 7.4
Identities = 15/48 (31%), Positives = 27/48 (56%)
Query: 13 PLASEEELVSACQLEKEEENEGEEEEEEEDEEDLDPDLDPDLEEEEND 60
P + E+ +K + EE+EEEE+EE+ + + + + EEEE +
Sbjct: 237 PQSLEDAASEESSKQKGILSHEEEDEEEEEEEEEEEEDEEEEEEEEEE 284
>gi|155030232 proline, glutamic acid and leucine rich protein 1
[Homo sapiens]
Length = 1130
Score = 45.1 bits (105), Expect = 2e-04
Identities = 25/56 (44%), Positives = 36/56 (64%), Gaps = 2/56 (3%)
Query: 5 EGPGKTCGPLASEEEL--VSACQLEKEEENEGEEEEEEEDEEDLDPDLDPDLEEEE 58
EG GP A EE+L ++ ++EEE E EEEEEEE+EE+ + D + + E+EE
Sbjct: 863 EGTPGGGGPPALEEDLTVININSSDEEEEEEEEEEEEEEEEEEEEEDFEEEEEDEE 918
Score = 36.6 bits (83), Expect = 0.060
Identities = 21/45 (46%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
Query: 15 ASEEELVSACQLEKEEENEGEEEEE-EEDEEDLDPDLDPDLEEEE 58
+S+EE + E+EEE E EEEE+ EE+EED + + + EEEE
Sbjct: 885 SSDEEEEEEEEEEEEEEEEEEEEEDFEEEEEDEEEYFEEEEEEEE 929
Score = 36.6 bits (83), Expect = 0.060
Identities = 20/48 (41%), Positives = 31/48 (64%), Gaps = 3/48 (6%)
Query: 17 EEELVSACQLEKEEENEGEEEEEE---EDEEDLDPDLDPDLEEEENDL 61
EEE + E+EE+ E EEE+EE E+EE+ + + + + EEEE +L
Sbjct: 895 EEEEEEEEEEEEEEDFEEEEEDEEEYFEEEEEEEEEFEEEFEEEEGEL 942
Score = 35.0 bits (79), Expect = 0.18
Identities = 17/35 (48%), Positives = 25/35 (71%)
Query: 27 EKEEENEGEEEEEEEDEEDLDPDLDPDLEEEENDL 61
E+EEE E EEE EE+E +L+ + + + EEEE +L
Sbjct: 923 EEEEEEEEFEEEFEEEEGELEEEEEEEDEEEEEEL 957
Score = 34.7 bits (78), Expect = 0.23
Identities = 20/44 (45%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Query: 17 EEELVSACQLEKEEENEGEEEEEEEDEEDLDPDLDPDLEEEEND 60
EEE + ++EE E EEEEEEE EE+ + + + +LEEEE +
Sbjct: 906 EEEDFEEEEEDEEEYFEEEEEEEEEFEEEFEEE-EGELEEEEEE 948
Score = 33.1 bits (74), Expect = 0.67
Identities = 19/42 (45%), Positives = 26/42 (61%)
Query: 17 EEELVSACQLEKEEENEGEEEEEEEDEEDLDPDLDPDLEEEE 58
EE+ + E+EEE E EEE EEE+ E + + + D EEEE
Sbjct: 914 EEDEEEYFEEEEEEEEEFEEEFEEEEGELEEEEEEEDEEEEE 955
Score = 32.7 bits (73), Expect = 0.87
Identities = 17/33 (51%), Positives = 23/33 (69%)
Query: 27 EKEEENEGEEEEEEEDEEDLDPDLDPDLEEEEN 59
E EEE E EE E EE+EE+ D + + +LEE E+
Sbjct: 930 EFEEEFEEEEGELEEEEEEEDEEEEEELEEVED 962
Score = 31.6 bits (70), Expect = 1.9
Identities = 15/31 (48%), Positives = 21/31 (67%)
Query: 17 EEELVSACQLEKEEENEGEEEEEEEDEEDLD 47
EEE + E+ E E EEEE+EE+EE+L+
Sbjct: 928 EEEFEEEFEEEEGELEEEEEEEDEEEEEELE 958
Score = 30.0 bits (66), Expect = 5.6
Identities = 17/39 (43%), Positives = 24/39 (61%)
Query: 17 EEELVSACQLEKEEENEGEEEEEEEDEEDLDPDLDPDLE 55
EEE + E+EE EEEEEE++EE+ + + DLE
Sbjct: 926 EEEEEFEEEFEEEEGELEEEEEEEDEEEEEELEEVEDLE 964
>gi|86262149 zinc finger and BTB domain containing 7C [Homo sapiens]
Length = 619
Score = 43.5 bits (101), Expect = 5e-04
Identities = 48/170 (28%), Positives = 77/170 (45%), Gaps = 24/170 (14%)
Query: 27 EKEEENEGEEEEEEEDEEDLDPDLDPDLEEEENDLGDPAVLG-------AVHNTQRALLS 79
+ +E+++ EE+EEEE+EE+ D D D + ++ +L DP + H T++A
Sbjct: 143 DDDEDDDDEEDEEEEEEEEEDDDDDTEDFADQENLPDPQDISCHQSPSKTDHLTEKAYSD 202
Query: 80 SP-------GVKAPGMLGM----SLASLHFLWQTLDYLSPIPFWPTFPSTSSPAQHFGPR 128
+P +PG LG+ S+ SL L + L + IP PS S A F P
Sbjct: 203 TPRDFPDSFQAGSPGHLGVIRDFSIESL--LRENLYPKANIP--DRRPSLSPFAPDFFPH 258
Query: 129 LPSPDPTLFCSLLTSWPPRFSHLTQLHPRHQRILQQQQHSQTPSPPAKKP 178
L D F L P S L ++++I ++++ P PP P
Sbjct: 259 LWPGDFGAFAQLPEQ--PMDSGPLDLVIKNRKIKEEEKEELPPPPPPPFP 306
>gi|56711320 hypothetical protein LOC145407 [Homo sapiens]
Length = 774
Score = 43.5 bits (101), Expect = 5e-04
Identities = 25/82 (30%), Positives = 45/82 (54%), Gaps = 2/82 (2%)
Query: 9 KTCGPLASEEELVSACQLEKEEENEGEEEEEEEDEEDLDPDLDPDLEEEENDLGDPAVLG 68
+T P + ++ L++ E EG+E+E+EEDEED D + + + E+EE+ D G
Sbjct: 587 RTVVPSITRVNTAASYGLDQLESEEGQEDEDEEDEEDEDEEEEDEEEDEEDKDADSLDEG 646
Query: 69 AVHNTQRALLSSPGV--KAPGM 88
+T+ + PG+ + PG+
Sbjct: 647 LDGDTELPGFTLPGITSQEPGL 668
>gi|94536805 splicing factor YT521-B isoform 2 [Homo sapiens]
Length = 709
Score = 43.1 bits (100), Expect = 6e-04
Identities = 24/46 (52%), Positives = 31/46 (67%), Gaps = 1/46 (2%)
Query: 15 ASEEELVSACQLEKEEENEGEEEEEEEDEEDLDPDLDPDLEEEEND 60
A E+E V E+EEE E EEEEEEE+EE+ + D + D +EE ND
Sbjct: 219 AEEDEEVDEDGEEEEEEEEEEEEEEEEEEEEYEQD-ERDQKEEGND 263
Score = 35.8 bits (81), Expect = 0.10
Identities = 20/58 (34%), Positives = 35/58 (60%), Gaps = 2/58 (3%)
Query: 17 EEELVSACQLEKEEENEGEEEEEEEDEEDLDPDLDPDLEEEENDLGDPAVLGAVHNTQ 74
+EE+ + ++E + +GEEEEEEE+EE + + + + EE E D D G ++T+
Sbjct: 212 DEEVEEDAEEDEEVDEDGEEEEEEEEEE--EEEEEEEEEEYEQDERDQKEEGNDYDTR 267
Score = 32.7 bits (73), Expect = 0.87
Identities = 18/45 (40%), Positives = 26/45 (57%)
Query: 16 SEEELVSACQLEKEEENEGEEEEEEEDEEDLDPDLDPDLEEEEND 60
+EEE V E EE E EE+EE DE+ + + + + EEEE +
Sbjct: 200 NEEEGVEEDVEEDEEVEEDAEEDEEVDEDGEEEEEEEEEEEEEEE 244
Score = 32.3 bits (72), Expect = 1.1
Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Query: 6 GPGKTCGPLASEEELVSACQLEKEE-ENEGEEEEEEEDEEDLDPDLDPDLEEEEND 60
G G S +E + + E+E E + EE+EE E++ + D ++D D EEEE +
Sbjct: 180 GSDHETGSSGSSDEQGNNTENEEEGVEEDVEEDEEVEEDAEEDEEVDEDGEEEEEE 235
Score = 32.3 bits (72), Expect = 1.1
Identities = 15/40 (37%), Positives = 23/40 (57%)
Query: 27 EKEEENEGEEEEEEEDEEDLDPDLDPDLEEEENDLGDPAV 66
E+EEE E EEE E+++ + + D D E +D G +V
Sbjct: 239 EEEEEEEEEEEYEQDERDQKEEGNDYDTRSEASDSGSESV 278
Score = 30.8 bits (68), Expect = 3.3
Identities = 13/44 (29%), Positives = 29/44 (65%)
Query: 17 EEELVSACQLEKEEENEGEEEEEEEDEEDLDPDLDPDLEEEEND 60
EE++ ++E++ E + E +E+ E+EE+ + + + + EEEE +
Sbjct: 206 EEDVEEDEEVEEDAEEDEEVDEDGEEEEEEEEEEEEEEEEEEEE 249
>gi|72534750 splicing factor YT521-B isoform 1 [Homo sapiens]
Length = 727
Score = 43.1 bits (100), Expect = 6e-04
Identities = 24/46 (52%), Positives = 31/46 (67%), Gaps = 1/46 (2%)
Query: 15 ASEEELVSACQLEKEEENEGEEEEEEEDEEDLDPDLDPDLEEEEND 60
A E+E V E+EEE E EEEEEEE+EE+ + D + D +EE ND
Sbjct: 219 AEEDEEVDEDGEEEEEEEEEEEEEEEEEEEEYEQD-ERDQKEEGND 263
Score = 35.8 bits (81), Expect = 0.10
Identities = 20/58 (34%), Positives = 35/58 (60%), Gaps = 2/58 (3%)
Query: 17 EEELVSACQLEKEEENEGEEEEEEEDEEDLDPDLDPDLEEEENDLGDPAVLGAVHNTQ 74
+EE+ + ++E + +GEEEEEEE+EE + + + + EE E D D G ++T+
Sbjct: 212 DEEVEEDAEEDEEVDEDGEEEEEEEEEE--EEEEEEEEEEYEQDERDQKEEGNDYDTR 267
Score = 32.7 bits (73), Expect = 0.87
Identities = 18/45 (40%), Positives = 26/45 (57%)
Query: 16 SEEELVSACQLEKEEENEGEEEEEEEDEEDLDPDLDPDLEEEEND 60
+EEE V E EE E EE+EE DE+ + + + + EEEE +
Sbjct: 200 NEEEGVEEDVEEDEEVEEDAEEDEEVDEDGEEEEEEEEEEEEEEE 244
Score = 32.3 bits (72), Expect = 1.1
Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Query: 6 GPGKTCGPLASEEELVSACQLEKEE-ENEGEEEEEEEDEEDLDPDLDPDLEEEEND 60
G G S +E + + E+E E + EE+EE E++ + D ++D D EEEE +
Sbjct: 180 GSDHETGSSGSSDEQGNNTENEEEGVEEDVEEDEEVEEDAEEDEEVDEDGEEEEEE 235
Score = 32.3 bits (72), Expect = 1.1
Identities = 15/40 (37%), Positives = 23/40 (57%)
Query: 27 EKEEENEGEEEEEEEDEEDLDPDLDPDLEEEENDLGDPAV 66
E+EEE E EEE E+++ + + D D E +D G +V
Sbjct: 239 EEEEEEEEEEEYEQDERDQKEEGNDYDTRSEASDSGSESV 278
Score = 30.8 bits (68), Expect = 3.3
Identities = 13/44 (29%), Positives = 29/44 (65%)
Query: 17 EEELVSACQLEKEEENEGEEEEEEEDEEDLDPDLDPDLEEEEND 60
EE++ ++E++ E + E +E+ E+EE+ + + + + EEEE +
Sbjct: 206 EEDVEEDEEVEEDAEEDEEVDEDGEEEEEEEEEEEEEEEEEEEE 249
>gi|100816397 MYST histone acetyltransferase (monocytic leukemia) 4
[Homo sapiens]
Length = 2073
Score = 42.4 bits (98), Expect = 0.001
Identities = 19/35 (54%), Positives = 28/35 (80%)
Query: 27 EKEEENEGEEEEEEEDEEDLDPDLDPDLEEEENDL 61
E+EEE+E EEEEEEE+EED + + + + EEEE ++
Sbjct: 1072 EEEEEDEEEEEEEEEEEEDEEEEEEEEEEEEEENI 1106
Score = 42.0 bits (97), Expect = 0.001
Identities = 19/34 (55%), Positives = 26/34 (76%)
Query: 27 EKEEENEGEEEEEEEDEEDLDPDLDPDLEEEEND 60
E+EEE E EEEEEEE+EE+ D + + + EEEE +
Sbjct: 1070 EEEEEEEDEEEEEEEEEEEEDEEEEEEEEEEEEE 1103
Score = 40.8 bits (94), Expect = 0.003
Identities = 22/50 (44%), Positives = 32/50 (64%), Gaps = 7/50 (14%)
Query: 15 ASEEELVSACQLEKEEENEGEEEEEEEDEEDLDPDLDPDLEEEENDLGDP 64
+SEEE E+EE+ E EEEEEEE+E++ + + + + EEEEN P
Sbjct: 1068 SSEEE-------EEEEDEEEEEEEEEEEEDEEEEEEEEEEEEEENIQSSP 1110
Score = 40.0 bits (92), Expect = 0.005
Identities = 25/68 (36%), Positives = 37/68 (54%), Gaps = 15/68 (22%)
Query: 9 KTCGPLAS--------EEELVSACQLEKEEENEGEEEEEEEDEE-------DLDPDLDPD 53
+TC P++ E++L+ + E+EEE E EEEEEEE EE + DPD
Sbjct: 1328 ETCAPVSPNTSPGEKPEDDLIKPEEEEEEEEEEEEEEEEEEGEEEEGGGNVEKDPDGAKS 1387
Query: 54 LEEEENDL 61
E+EE ++
Sbjct: 1388 QEKEEPEI 1395
Score = 39.7 bits (91), Expect = 0.007
Identities = 20/49 (40%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Query: 13 PLASEE-ELVSACQLEKEEENEGEEEEEEEDEEDLDPDLDPDLEEEEND 60
P+ E +L+ + EEE E E+EEEEE+EE+ + D + + EEEE +
Sbjct: 1053 PVTGERGQLLELSKESSEEEEEEEDEEEEEEEEEEEEDEEEEEEEEEEE 1101
Score = 39.3 bits (90), Expect = 0.009
Identities = 19/42 (45%), Positives = 28/42 (66%)
Query: 19 ELVSACQLEKEEENEGEEEEEEEDEEDLDPDLDPDLEEEEND 60
EL E+EEE + EEEEEEE+EE+ + + + + EEEE +
Sbjct: 1063 ELSKESSEEEEEEEDEEEEEEEEEEEEDEEEEEEEEEEEEEE 1104
Score = 32.3 bits (72), Expect = 1.1
Identities = 17/43 (39%), Positives = 26/43 (60%)
Query: 17 EEELVSACQLEKEEENEGEEEEEEEDEEDLDPDLDPDLEEEEN 59
E+E + E+EE+ E EEEEEEE+EE+ P L + ++
Sbjct: 1076 EDEEEEEEEEEEEEDEEEEEEEEEEEEEENIQSSPPRLTKPQS 1118
>gi|210032580 SET domain containing 1B [Homo sapiens]
Length = 1923
Score = 42.4 bits (98), Expect = 0.001
Identities = 23/50 (46%), Positives = 29/50 (58%)
Query: 17 EEELVSACQLEKEEENEGEEEEEEEDEEDLDPDLDPDLEEEENDLGDPAV 66
EE+ + E+E E EE EEEE+EED D D D +E END D A+
Sbjct: 1034 EEDEKESLSEEQESTEEEEEAEEEEEEEDDDDDDSDDRDESENDDEDTAL 1083
Score = 30.0 bits (66), Expect = 5.6
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 3/53 (5%)
Query: 14 LASEEELVSACQLEKEEENEGEEEEEEEDEEDLDPDLDPDL---EEEENDLGD 63
L+ E+E + +EEE E ++++++ D+ D + D D E E D GD
Sbjct: 1041 LSEEQESTEEEEEAEEEEEEEDDDDDDSDDRDESENDDEDTALSEASEKDEGD 1093
Score = 29.6 bits (65), Expect = 7.4
Identities = 19/69 (27%), Positives = 36/69 (52%), Gaps = 5/69 (7%)
Query: 15 ASEEELVSACQLEKEEENEGEEEEEEEDE---EDLDPDLDPDLEEEENDLGDPAVLGAVH 71
++EEE + E+EEE++ +++ ++ DE +D D L E++E D + + V
Sbjct: 1047 STEEE--EEAEEEEEEEDDDDDDSDDRDESENDDEDTALSEASEKDEGDSDEEETVSIVT 1104
Query: 72 NTQRALLSS 80
+ A SS
Sbjct: 1105 SKAEATSSS 1113
Score = 29.6 bits (65), Expect = 7.4
Identities = 20/50 (40%), Positives = 24/50 (48%), Gaps = 10/50 (20%)
Query: 27 EKEEENEGEEEEEEEDEEDL----------DPDLDPDLEEEENDLGDPAV 66
E EEE EEEEEE+EE++ D + D EE G PAV
Sbjct: 1133 EDEEEVVAREEEEEEEEEEMVAEESMASAGPEDFEQDGEEAALAPGAPAV 1182
>gi|45331217 zinc finger protein 526 [Homo sapiens]
Length = 670
Score = 42.4 bits (98), Expect = 0.001
Identities = 24/43 (55%), Positives = 30/43 (69%), Gaps = 1/43 (2%)
Query: 26 LEKEEENEGEEEEEEEDEEDLDPDLDPDLEEEENDLGDPAVLG 68
LEKEE N G EEEEE+DEED + D + + EE ++GD AV G
Sbjct: 223 LEKEERN-GLEEEEEDDEEDEEDDEEMEDEEAMAEVGDDAVGG 264
>gi|94536860 hypothetical protein LOC138724 isoform B [Homo
sapiens]
Length = 1044
Score = 42.0 bits (97), Expect = 0.001
Identities = 26/65 (40%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Query: 2 NCLEGPGKTCGPLASEEELVS-ACQLEKEEENEGEEEEEEEDEEDLDPDLDPDLEEEEND 60
+C + PG PL + C+ + E E EGEEEEE EDE LDP L P +E
Sbjct: 34 SCFQSPGNLELPLLHRVAFLDHLCKQKSEVEEEGEEEEEGEDEASLDP-LKPCSPTKEAP 92
Query: 61 LGDPA 65
G+ A
Sbjct: 93 TGEQA 97
>gi|22035677 AT rich interactive domain 4B isoform 1 [Homo sapiens]
Length = 1312
Score = 42.0 bits (97), Expect = 0.001
Identities = 24/54 (44%), Positives = 33/54 (61%), Gaps = 2/54 (3%)
Query: 15 ASEEELVSACQLEKEEENEGEE--EEEEEDEEDLDPDLDPDLEEEENDLGDPAV 66
A EE+ S + KEE+ + EE EEEEE+EE+ D D D + EEEE + P +
Sbjct: 520 AEEEKAKSGDETNKEEDEDDEEAEEEEEEEEEEEDEDDDDNNEEEEFECYPPGM 573
Score = 36.6 bits (83), Expect = 0.060
Identities = 17/47 (36%), Positives = 28/47 (59%)
Query: 17 EEELVSACQLEKEEENEGEEEEEEEDEEDLDPDLDPDLEEEENDLGD 63
+E L + E+E+ G+E +EEDE+D + + + + EEEE D D
Sbjct: 511 DESLNIKVEAEEEKAKSGDETNKEEDEDDEEAEEEEEEEEEEEDEDD 557
Score = 35.8 bits (81), Expect = 0.10
Identities = 15/40 (37%), Positives = 28/40 (70%)
Query: 22 SACQLEKEEENEGEEEEEEEDEEDLDPDLDPDLEEEENDL 61
S+ + E+EEE E +E+E+E++ + + +++P EE EN L
Sbjct: 274 SSSEAEEEEEEEDDEKEKEDNSSEEEEEIEPFPEERENFL 313
Score = 31.6 bits (70), Expect = 1.9
Identities = 13/35 (37%), Positives = 23/35 (65%)
Query: 27 EKEEENEGEEEEEEEDEEDLDPDLDPDLEEEENDL 61
E +E++ E EEEE+EED + + + + EEE ++
Sbjct: 268 ELKEDSSSSEAEEEEEEEDDEKEKEDNSSEEEEEI 302
Score = 29.3 bits (64), Expect = 9.6
Identities = 13/40 (32%), Positives = 25/40 (62%)
Query: 12 GPLASEEELVSACQLEKEEENEGEEEEEEEDEEDLDPDLD 51
G ++EE + E+EEE E EEE+E++D+ + + + +
Sbjct: 528 GDETNKEEDEDDEEAEEEEEEEEEEEDEDDDDNNEEEEFE 567
>gi|4758178 dynein, cytoplasmic 1, intermediate chain 1 isoform a
[Homo sapiens]
Length = 645
Score = 41.6 bits (96), Expect = 0.002
Identities = 28/102 (27%), Positives = 52/102 (50%), Gaps = 6/102 (5%)
Query: 25 QLEKEEENEGEEEEEEEDEEDLDPDLDPDLEEEENDLGDPAVLGAVHNTQRALLSSPGVK 84
+LE++++ + EE++ +E+ + D+++++ + D + L ALL S G+
Sbjct: 10 ELERKKQRLAQIREEKKRKEEERKKKEADMQQKKEPVQDDSDLDRKRRETEALLQSIGIS 69
Query: 85 APGMLGMSLASLHFL-WQT--LDYLSPIPFWPTFPSTSSPAQ 123
L + LHFL W T YL P P P+ S S+P++
Sbjct: 70 PEPPL---VQPLHFLTWDTCYFHYLVPTPMSPSSKSVSTPSE 108
>gi|55953110 retinoblastoma protein-binding zinc finger protein
isoform c [Homo sapiens]
Length = 1481
Score = 41.6 bits (96), Expect = 0.002
Identities = 25/72 (34%), Positives = 35/72 (48%), Gaps = 9/72 (12%)
Query: 4 LEGPGKTCGPLASEEELVSACQLEKEEENEGEEEEEEEDEEDLDPDLDPDLEEE------ 57
L P P +E + A E + E EEEEEEEDEE+ + D D +LE+E
Sbjct: 38 LATPAPAWEPQPEPDERLEAAACEVNDLGEEEEEEEEEDEEEEEDDDDDELEDEGEEEAS 97
Query: 58 ---ENDLGDPAV 66
EN + +P +
Sbjct: 98 MPNENSVKEPEI 109
>gi|20336260 retinoblastoma protein-binding zinc finger protein
isoform b [Homo sapiens]
Length = 1682
Score = 41.6 bits (96), Expect = 0.002
Identities = 25/72 (34%), Positives = 35/72 (48%), Gaps = 9/72 (12%)
Query: 4 LEGPGKTCGPLASEEELVSACQLEKEEENEGEEEEEEEDEEDLDPDLDPDLEEE------ 57
L P P +E + A E + E EEEEEEEDEE+ + D D +LE+E
Sbjct: 239 LATPAPAWEPQPEPDERLEAAACEVNDLGEEEEEEEEEDEEEEEDDDDDELEDEGEEEAS 298
Query: 58 ---ENDLGDPAV 66
EN + +P +
Sbjct: 299 MPNENSVKEPEI 310
>gi|20336258 retinoblastoma protein-binding zinc finger protein
isoform a [Homo sapiens]
Length = 1718
Score = 41.6 bits (96), Expect = 0.002
Identities = 25/72 (34%), Positives = 35/72 (48%), Gaps = 9/72 (12%)
Query: 4 LEGPGKTCGPLASEEELVSACQLEKEEENEGEEEEEEEDEEDLDPDLDPDLEEE------ 57
L P P +E + A E + E EEEEEEEDEE+ + D D +LE+E
Sbjct: 239 LATPAPAWEPQPEPDERLEAAACEVNDLGEEEEEEEEEDEEEEEDDDDDELEDEGEEEAS 298
Query: 58 ---ENDLGDPAV 66
EN + +P +
Sbjct: 299 MPNENSVKEPEI 310
>gi|169210053 PREDICTED: hypothetical protein [Homo sapiens]
Length = 185
Score = 41.2 bits (95), Expect = 0.002
Identities = 21/47 (44%), Positives = 31/47 (65%)
Query: 14 LASEEELVSACQLEKEEENEGEEEEEEEDEEDLDPDLDPDLEEEEND 60
L EEE V + E EEE + EE+EE+E+EE+ + + + D EEEE +
Sbjct: 116 LPVEEEEVEEEEEEVEEEEKEEEKEEDEEEEEKEEEKEEDEEEEEKE 162
Score = 36.6 bits (83), Expect = 0.060
Identities = 17/46 (36%), Positives = 31/46 (67%)
Query: 13 PLASEEELVSACQLEKEEENEGEEEEEEEDEEDLDPDLDPDLEEEE 58
P+ EE ++E+EE+ E +EE+EEE+E++ + + D + EE+E
Sbjct: 117 PVEEEEVEEEEEEVEEEEKEEEKEEDEEEEEKEEEKEEDEEEEEKE 162
Score = 35.4 bits (80), Expect = 0.13
Identities = 20/42 (47%), Positives = 26/42 (61%)
Query: 19 ELVSACQLEKEEENEGEEEEEEEDEEDLDPDLDPDLEEEEND 60
E SA Q EE E EEEEEE +EE+ + + + D EEEE +
Sbjct: 108 EECSAQQGLPVEEEEVEEEEEEVEEEEKEEEKEEDEEEEEKE 149
Score = 33.9 bits (76), Expect = 0.39
Identities = 16/34 (47%), Positives = 23/34 (67%)
Query: 27 EKEEENEGEEEEEEEDEEDLDPDLDPDLEEEEND 60
E+EEE E E+EE+EE+EE ++ + EEE D
Sbjct: 143 EEEEEKEEEKEEDEEEEEKEGKKMEEEKVEEEID 176
Score = 30.8 bits (68), Expect = 3.3
Identities = 17/45 (37%), Positives = 26/45 (57%)
Query: 17 EEELVSACQLEKEEENEGEEEEEEEDEEDLDPDLDPDLEEEENDL 61
EEE + E EEE E EEE+EE++EE+ + E+ E ++
Sbjct: 131 EEEEKEEEKEEDEEEEEKEEEKEEDEEEEEKEGKKMEEEKVEEEI 175
Score = 30.8 bits (68), Expect = 3.3
Identities = 12/24 (50%), Positives = 20/24 (83%)
Query: 27 EKEEENEGEEEEEEEDEEDLDPDL 50
E+EEE EG++ EEE+ EE++D ++
Sbjct: 156 EEEEEKEGKKMEEEKVEEEIDTEI 179
Score = 29.3 bits (64), Expect = 9.6
Identities = 15/49 (30%), Positives = 29/49 (59%), Gaps = 7/49 (14%)
Query: 17 EEELVSACQLEKEEENEGEEEEEEE-------DEEDLDPDLDPDLEEEE 58
+EE + E+E+E E EE+EEEE +EE ++ ++D +++ +
Sbjct: 135 KEEEKEEDEEEEEKEEEKEEDEEEEEKEGKKMEEEKVEEEIDTEIQRTQ 183
>gi|239744307 PREDICTED: similar to hCG1991922 [Homo sapiens]
Length = 486
Score = 41.2 bits (95), Expect = 0.002
Identities = 19/49 (38%), Positives = 32/49 (65%)
Query: 15 ASEEELVSACQLEKEEENEGEEEEEEEDEEDLDPDLDPDLEEEENDLGD 63
A+ +V A + +K++E E EE+EE++EE+ D D D + +E+E D D
Sbjct: 306 AANNGVVKAAKSKKKKEEEENEEDEEDEEEEKDEDEDEEDDEDEEDGDD 354
Score = 36.2 bits (82), Expect = 0.079
Identities = 16/34 (47%), Positives = 24/34 (70%)
Query: 27 EKEEENEGEEEEEEEDEEDLDPDLDPDLEEEEND 60
E+EE E EE+EEEE +ED D + D D E+ +++
Sbjct: 322 EEEENEEDEEDEEEEKDEDEDEEDDEDEEDGDDE 355
Score = 35.0 bits (79), Expect = 0.18
Identities = 14/33 (42%), Positives = 25/33 (75%)
Query: 27 EKEEENEGEEEEEEEDEEDLDPDLDPDLEEEEN 59
E EE+ E EEEE++EDE++ D + + D ++E++
Sbjct: 325 ENEEDEEDEEEEKDEDEDEEDDEDEEDGDDEQS 357
Score = 33.5 bits (75), Expect = 0.51
Identities = 16/33 (48%), Positives = 24/33 (72%)
Query: 17 EEELVSACQLEKEEENEGEEEEEEEDEEDLDPD 49
EEE + E+EE++E E+EE++EDEED D +
Sbjct: 323 EEENEEDEEDEEEEKDEDEDEEDDEDEEDGDDE 355
>gi|4885193 AT rich interactive domain 3A (BRIGHT- like) protein
[Homo sapiens]
Length = 593
Score = 41.2 bits (95), Expect = 0.002
Identities = 24/61 (39%), Positives = 38/61 (62%), Gaps = 6/61 (9%)
Query: 5 EGPGKT-CGPLASEEELVSACQLEKEEENEGEEEEEEEDEEDLDPDLDPDLEEEENDLGD 63
EGPG+ +AS+E++ + E+ EE+ GE+EEEEE++ + D + EE+E LG
Sbjct: 107 EGPGEEHFEDMASDEDMKPKWEEEEMEEDLGEDEEEEEEDYE-----DEEEEEDEEGLGP 161
Query: 64 P 64
P
Sbjct: 162 P 162
>gi|58761548 tau tubulin kinase 1 [Homo sapiens]
Length = 1321
Score = 41.2 bits (95), Expect = 0.002
Identities = 21/58 (36%), Positives = 36/58 (62%)
Query: 13 PLASEEELVSACQLEKEEENEGEEEEEEEDEEDLDPDLDPDLEEEENDLGDPAVLGAV 70
PLA + + + E+EEE + EEEEE+E+EE+ + + + + EEEE + + A A+
Sbjct: 721 PLAPVQPQANGKEEEEEEEEDEEEEEEDEEEEEEEEEEEEEEEEEEEEEEEAAAAVAL 778
Score = 41.2 bits (95), Expect = 0.002
Identities = 19/44 (43%), Positives = 29/44 (65%)
Query: 27 EKEEENEGEEEEEEEDEEDLDPDLDPDLEEEENDLGDPAVLGAV 70
E+E+E E EE+EEEE+EE+ + + + + EEEE + LG V
Sbjct: 738 EEEDEEEEEEDEEEEEEEEEEEEEEEEEEEEEEEAAAAVALGEV 781
Score = 35.0 bits (79), Expect = 0.18
Identities = 16/40 (40%), Positives = 25/40 (62%)
Query: 21 VSACQLEKEEENEGEEEEEEEDEEDLDPDLDPDLEEEEND 60
V ++ + + EEEEEEEDEE+ + D + + EEEE +
Sbjct: 720 VPLAPVQPQANGKEEEEEEEEDEEEEEEDEEEEEEEEEEE 759
>gi|158420731 chromodomain helicase DNA binding protein 3 isoform
3 [Homo sapiens]
Length = 2059
Score = 40.8 bits (94), Expect = 0.003
Identities = 27/70 (38%), Positives = 36/70 (51%), Gaps = 4/70 (5%)
Query: 13 PLASEEELVSACQLEKEEENEGEEEEEEEDEEDLDPDLDPDLEEEENDLGDPAVLGAVHN 72
PL EEE + +EEE E EE +EEE+EE D D + +++E LG G H+
Sbjct: 4 PLRDEEEEEEEMVVSEEEEEEEEEGDEEEEEEVEAADEDDEEDDDEGVLG----RGPGHD 59
Query: 73 TQRALLSSPG 82
R S PG
Sbjct: 60 RGRDRHSPPG 69
Score = 29.6 bits (65), Expect = 7.4
Identities = 17/39 (43%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Query: 8 GKTCGPLASEEELVSACQLEKEE-ENEGEEEEEEEDEED 45
GK P +E + + E+EE E EGEEE E+E+E+D
Sbjct: 475 GKWSCPHCEKEGVQWEAKEEEEEYEEEGEEEGEKEEEDD 513
>gi|48255889 protein kinase C substrate 80K-H isoform 1 [Homo
sapiens]
Length = 528
Score = 40.4 bits (93), Expect = 0.004
Identities = 23/48 (47%), Positives = 25/48 (52%), Gaps = 6/48 (12%)
Query: 5 EGPGKTCGPLASEEELVSACQLEKEEENEGEEEEEEEDEEDLDPDLDP 52
E P P EEE E+EEE E EEEEEEED E+ P L P
Sbjct: 303 EQPPVPSSPTEEEEEE------EEEEEEEAEEEEEEEDSEEAPPPLSP 344
Score = 33.1 bits (74), Expect = 0.67
Identities = 17/40 (42%), Positives = 24/40 (60%)
Query: 13 PLASEEELVSACQLEKEEENEGEEEEEEEDEEDLDPDLDP 52
P + + S+ E+EEE E EEEE EE+EE+ D + P
Sbjct: 300 PKEEQPPVPSSPTEEEEEEEEEEEEEAEEEEEEEDSEEAP 339
Score = 32.7 bits (73), Expect = 0.87
Identities = 16/33 (48%), Positives = 21/33 (63%)
Query: 22 SACQLEKEEENEGEEEEEEEDEEDLDPDLDPDL 54
S + E+EEE E EEE EEE+EE+ + P L
Sbjct: 310 SPTEEEEEEEEEEEEEAEEEEEEEDSEEAPPPL 342
Score = 29.6 bits (65), Expect = 7.4
Identities = 15/32 (46%), Positives = 19/32 (59%)
Query: 33 EGEEEEEEEDEEDLDPDLDPDLEEEENDLGDP 64
E EEEEEEE+EE + + + D EE L P
Sbjct: 314 EEEEEEEEEEEEAEEEEEEEDSEEAPPPLSPP 345
>gi|239749996 PREDICTED: similar to hCG1991922 [Homo sapiens]
Length = 487
Score = 40.0 bits (92), Expect = 0.005
Identities = 20/49 (40%), Positives = 33/49 (67%), Gaps = 3/49 (6%)
Query: 15 ASEEELVSACQLEK---EEENEGEEEEEEEDEEDLDPDLDPDLEEEEND 60
A+ +V A + +K EEENE +EE+EEE++++ D D + D +EE+ D
Sbjct: 306 AANNGVVKAAKSKKKKEEEENEEDEEDEEEEKDEEDEDEEDDEDEEDGD 354
Score = 37.7 bits (86), Expect = 0.027
Identities = 17/37 (45%), Positives = 26/37 (70%)
Query: 27 EKEEENEGEEEEEEEDEEDLDPDLDPDLEEEENDLGD 63
+K+EE E EE+EE+E+EE + D D + +E+E D D
Sbjct: 319 KKKEEEENEEDEEDEEEEKDEEDEDEEDDEDEEDGDD 355
Score = 37.0 bits (84), Expect = 0.046
Identities = 16/34 (47%), Positives = 25/34 (73%)
Query: 27 EKEEENEGEEEEEEEDEEDLDPDLDPDLEEEEND 60
E+E E + E+EEEE+DEED D + D D E+ +++
Sbjct: 323 EEENEEDEEDEEEEKDEEDEDEEDDEDEEDGDDE 356
Score = 33.5 bits (75), Expect = 0.51
Identities = 15/30 (50%), Positives = 22/30 (73%)
Query: 27 EKEEENEGEEEEEEEDEEDLDPDLDPDLEE 56
E EE+ E E++EE+EDEED + + D D E+
Sbjct: 328 EDEEDEEEEKDEEDEDEEDDEDEEDGDDEQ 357
Score = 32.0 bits (71), Expect = 1.5
Identities = 12/32 (37%), Positives = 25/32 (78%)
Query: 28 KEEENEGEEEEEEEDEEDLDPDLDPDLEEEEN 59
+E+E + EEE++EEDE++ D + + D ++E++
Sbjct: 327 EEDEEDEEEEKDEEDEDEEDDEDEEDGDDEQS 358
>gi|195546902 suppressor of Ty 5 homolog isoform b [Homo sapiens]
Length = 1083
Score = 40.0 bits (92), Expect = 0.005
Identities = 24/44 (54%), Positives = 28/44 (63%), Gaps = 7/44 (15%)
Query: 17 EEELVSACQLEKEEENEGEEEEEEEDEEDLDPDLDPDLEEEEND 60
+EE SA EKEEE E EEEEEEE+E D + EEEE+D
Sbjct: 27 DEERRSAAGSEKEEEPEDEEEEEEEEEYD-------EEEEEEDD 63
Score = 32.0 bits (71), Expect = 1.5
Identities = 13/29 (44%), Positives = 22/29 (75%)
Query: 32 NEGEEEEEEEDEEDLDPDLDPDLEEEEND 60
+E EEE E+E+EE+ + + D + EEE++D
Sbjct: 36 SEKEEEPEDEEEEEEEEEYDEEEEEEDDD 64
Score = 31.2 bits (69), Expect = 2.5
Identities = 15/29 (51%), Positives = 21/29 (72%)
Query: 16 SEEELVSACQLEKEEENEGEEEEEEEDEE 44
SE+E + E+EEE E +EEEEEED++
Sbjct: 36 SEKEEEPEDEEEEEEEEEYDEEEEEEDDD 64
>gi|195546900 suppressor of Ty 5 homolog isoform a [Homo sapiens]
Length = 1087
Score = 40.0 bits (92), Expect = 0.005
Identities = 24/44 (54%), Positives = 28/44 (63%), Gaps = 7/44 (15%)
Query: 17 EEELVSACQLEKEEENEGEEEEEEEDEEDLDPDLDPDLEEEEND 60
+EE SA EKEEE E EEEEEEE+E D + EEEE+D
Sbjct: 27 DEERRSAAGSEKEEEPEDEEEEEEEEEYD-------EEEEEEDD 63
Score = 32.0 bits (71), Expect = 1.5
Identities = 13/29 (44%), Positives = 22/29 (75%)
Query: 32 NEGEEEEEEEDEEDLDPDLDPDLEEEEND 60
+E EEE E+E+EE+ + + D + EEE++D
Sbjct: 36 SEKEEEPEDEEEEEEEEEYDEEEEEEDDD 64
Score = 31.2 bits (69), Expect = 2.5
Identities = 15/29 (51%), Positives = 21/29 (72%)
Query: 16 SEEELVSACQLEKEEENEGEEEEEEEDEE 44
SE+E + E+EEE E +EEEEEED++
Sbjct: 36 SEKEEEPEDEEEEEEEEEYDEEEEEEDDD 64
>gi|161169023 suppressor of Ty 5 homolog isoform a [Homo sapiens]
Length = 1087
Score = 40.0 bits (92), Expect = 0.005
Identities = 24/44 (54%), Positives = 28/44 (63%), Gaps = 7/44 (15%)
Query: 17 EEELVSACQLEKEEENEGEEEEEEEDEEDLDPDLDPDLEEEEND 60
+EE SA EKEEE E EEEEEEE+E D + EEEE+D
Sbjct: 27 DEERRSAAGSEKEEEPEDEEEEEEEEEYD-------EEEEEEDD 63
Score = 32.0 bits (71), Expect = 1.5
Identities = 13/29 (44%), Positives = 22/29 (75%)
Query: 32 NEGEEEEEEEDEEDLDPDLDPDLEEEEND 60
+E EEE E+E+EE+ + + D + EEE++D
Sbjct: 36 SEKEEEPEDEEEEEEEEEYDEEEEEEDDD 64
Score = 31.2 bits (69), Expect = 2.5
Identities = 15/29 (51%), Positives = 21/29 (72%)
Query: 16 SEEELVSACQLEKEEENEGEEEEEEEDEE 44
SE+E + E+EEE E +EEEEEED++
Sbjct: 36 SEKEEEPEDEEEEEEEEEYDEEEEEEDDD 64
>gi|20149524 suppressor of Ty 5 homolog isoform a [Homo sapiens]
Length = 1087
Score = 40.0 bits (92), Expect = 0.005
Identities = 24/44 (54%), Positives = 28/44 (63%), Gaps = 7/44 (15%)
Query: 17 EEELVSACQLEKEEENEGEEEEEEEDEEDLDPDLDPDLEEEEND 60
+EE SA EKEEE E EEEEEEE+E D + EEEE+D
Sbjct: 27 DEERRSAAGSEKEEEPEDEEEEEEEEEYD-------EEEEEEDD 63
Score = 32.0 bits (71), Expect = 1.5
Identities = 13/29 (44%), Positives = 22/29 (75%)
Query: 32 NEGEEEEEEEDEEDLDPDLDPDLEEEEND 60
+E EEE E+E+EE+ + + D + EEE++D
Sbjct: 36 SEKEEEPEDEEEEEEEEEYDEEEEEEDDD 64
Score = 31.2 bits (69), Expect = 2.5
Identities = 15/29 (51%), Positives = 21/29 (72%)
Query: 16 SEEELVSACQLEKEEENEGEEEEEEEDEE 44
SE+E + E+EEE E +EEEEEED++
Sbjct: 36 SEKEEEPEDEEEEEEEEEYDEEEEEEDDD 64
>gi|57242757 calsyntenin 1 isoform 1 [Homo sapiens]
Length = 981
Score = 40.0 bits (92), Expect = 0.005
Identities = 22/55 (40%), Positives = 32/55 (58%), Gaps = 2/55 (3%)
Query: 10 TCGPLASEEELVSACQLEKEEENEGEEEEEEEDEEDLDPDLDPDLEEEENDLGDP 64
T P+ + E+ S+ E+EEE E EE E+ E+E+D+ EEEE + GDP
Sbjct: 911 TVNPMETYEDQHSS--EEEEEEEEEEESEDGEEEDDITSAESESSEEEEGEQGDP 963
>gi|57242755 calsyntenin 1 isoform 2 [Homo sapiens]
Length = 971
Score = 40.0 bits (92), Expect = 0.005
Identities = 22/55 (40%), Positives = 32/55 (58%), Gaps = 2/55 (3%)
Query: 10 TCGPLASEEELVSACQLEKEEENEGEEEEEEEDEEDLDPDLDPDLEEEENDLGDP 64
T P+ + E+ S+ E+EEE E EE E+ E+E+D+ EEEE + GDP
Sbjct: 901 TVNPMETYEDQHSS--EEEEEEEEEEESEDGEEEDDITSAESESSEEEEGEQGDP 953
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.133 0.399
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 24,413,649
Number of Sequences: 37866
Number of extensions: 1288861
Number of successful extensions: 24944
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 470
Number of HSP's successfully gapped in prelim test: 163
Number of HSP's that attempted gapping in prelim test: 12634
Number of HSP's gapped (non-prelim): 6035
length of query: 543
length of database: 18,247,518
effective HSP length: 107
effective length of query: 436
effective length of database: 14,195,856
effective search space: 6189393216
effective search space used: 6189393216
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.