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Search of human proteins with 22325372
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|22325372 hypothetical protein LOC138716 [Homo sapiens]
(163 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|22325372 hypothetical protein LOC138716 [Homo sapiens] 336 6e-93
gi|22325370 hypothetical protein LOC138716 [Homo sapiens] 336 6e-93
gi|93277074 ribonuclease P 25kDa subunit [Homo sapiens] 132 2e-31
gi|148727370 immediate early response 5-like [Homo sapiens] 34 0.064
gi|7657693 zinc finger protein 324 [Homo sapiens] 34 0.064
gi|15812178 zinc finger protein 36, C3H type-like 2 [Homo sapiens] 31 0.54
gi|239746480 PREDICTED: hypothetical protein XP_002343771 [Homo ... 30 0.71
gi|4504379 leucine-rich repeat-containing G protein-coupled rece... 30 0.92
gi|30089935 transmembrane protein 132A isoform a [Homo sapiens] 30 0.92
gi|30089937 transmembrane protein 132A isoform b [Homo sapiens] 30 0.92
gi|40254834 kinesin family member 1C [Homo sapiens] 30 1.2
gi|144922631 tigger transposable element derived 5 [Homo sapiens] 29 1.6
gi|18079216 CASK interacting protein 1 [Homo sapiens] 29 2.1
gi|18252045 ADAM metallopeptidase domain 33 isoform alpha prepro... 29 2.1
gi|24041040 ADAM metallopeptidase domain 33 isoform beta preprop... 29 2.1
gi|33457336 chromosome 14 open reading frame 4 [Homo sapiens] 29 2.1
gi|21359873 polo-like kinase 1 [Homo sapiens] 28 2.7
gi|37622341 zinc finger protein 42 isoform 2 [Homo sapiens] 28 2.7
gi|37622345 zinc finger protein 42 isoform 1 [Homo sapiens] 28 2.7
gi|7669528 neuregulin 2 isoform 2 [Homo sapiens] 28 2.7
gi|7669532 neuregulin 2 isoform 4 [Homo sapiens] 28 2.7
gi|7669530 neuregulin 2 isoform 3 [Homo sapiens] 28 2.7
gi|4758832 neuregulin 2 isoform 1 [Homo sapiens] 28 2.7
gi|122937496 WAS/WASL interacting protein family, member 3 [Homo... 28 2.7
gi|156071470 hyperpolarization activated cyclic nucleotide-gated... 28 3.5
gi|21541824 transducin-like enhancer protein 1 [Homo sapiens] 28 3.5
gi|56676337 transmembrane protein 28 [Homo sapiens] 28 3.5
gi|166158925 endothelial cell growth factor 1 (platelet-derived)... 28 4.6
gi|4503445 endothelial cell growth factor 1 (platelet-derived) p... 28 4.6
gi|166158922 endothelial cell growth factor 1 (platelet-derived)... 28 4.6
>gi|22325372 hypothetical protein LOC138716 [Homo sapiens]
Length = 163
Score = 336 bits (861), Expect = 6e-93
Identities = 163/163 (100%), Positives = 163/163 (100%)
Query: 1 MEHYRKAGSVELPAPSPMPQLPPDTLEMRVRDGSKIRNLLGLALGRLEGGSARHVVFSGS 60
MEHYRKAGSVELPAPSPMPQLPPDTLEMRVRDGSKIRNLLGLALGRLEGGSARHVVFSGS
Sbjct: 1 MEHYRKAGSVELPAPSPMPQLPPDTLEMRVRDGSKIRNLLGLALGRLEGGSARHVVFSGS 60
Query: 61 GRAAGKAVSCAEIVKRRVPGLHQLTKLRFLQTEDSWVPASPDTGLDPLTVRRHVPAVWVL 120
GRAAGKAVSCAEIVKRRVPGLHQLTKLRFLQTEDSWVPASPDTGLDPLTVRRHVPAVWVL
Sbjct: 61 GRAAGKAVSCAEIVKRRVPGLHQLTKLRFLQTEDSWVPASPDTGLDPLTVRRHVPAVWVL 120
Query: 121 LSRDPLDPNECGYQPPGAPPGLGSMPSSSCGPRSRRRARDTRS 163
LSRDPLDPNECGYQPPGAPPGLGSMPSSSCGPRSRRRARDTRS
Sbjct: 121 LSRDPLDPNECGYQPPGAPPGLGSMPSSSCGPRSRRRARDTRS 163
>gi|22325370 hypothetical protein LOC138716 [Homo sapiens]
Length = 163
Score = 336 bits (861), Expect = 6e-93
Identities = 163/163 (100%), Positives = 163/163 (100%)
Query: 1 MEHYRKAGSVELPAPSPMPQLPPDTLEMRVRDGSKIRNLLGLALGRLEGGSARHVVFSGS 60
MEHYRKAGSVELPAPSPMPQLPPDTLEMRVRDGSKIRNLLGLALGRLEGGSARHVVFSGS
Sbjct: 1 MEHYRKAGSVELPAPSPMPQLPPDTLEMRVRDGSKIRNLLGLALGRLEGGSARHVVFSGS 60
Query: 61 GRAAGKAVSCAEIVKRRVPGLHQLTKLRFLQTEDSWVPASPDTGLDPLTVRRHVPAVWVL 120
GRAAGKAVSCAEIVKRRVPGLHQLTKLRFLQTEDSWVPASPDTGLDPLTVRRHVPAVWVL
Sbjct: 61 GRAAGKAVSCAEIVKRRVPGLHQLTKLRFLQTEDSWVPASPDTGLDPLTVRRHVPAVWVL 120
Query: 121 LSRDPLDPNECGYQPPGAPPGLGSMPSSSCGPRSRRRARDTRS 163
LSRDPLDPNECGYQPPGAPPGLGSMPSSSCGPRSRRRARDTRS
Sbjct: 121 LSRDPLDPNECGYQPPGAPPGLGSMPSSSCGPRSRRRARDTRS 163
>gi|93277074 ribonuclease P 25kDa subunit [Homo sapiens]
Length = 199
Score = 132 bits (331), Expect = 2e-31
Identities = 73/172 (42%), Positives = 99/172 (57%), Gaps = 18/172 (10%)
Query: 1 MEHYRKAGSVELPA----------PSPMPQLPPDTLEMRVRDGSKIRNLLGLALGRLEGG 50
ME++RK S E PA P L P + MRV++GSKIRNL+ A +
Sbjct: 1 MENFRKVRSEEAPAGCGAEGGGPGSGPFADLAPGAVHMRVKEGSKIRNLMAFATASMAQP 60
Query: 51 SARHVVFSGSGRAAGKAVSCAEIVKRRVPGLHQLTKLRFLQTEDSW--VPASPDTGLDP- 107
+ R +VFSG GRA K V+CAEI+KRR+ GLHQ+T+LR+ + W +P P G P
Sbjct: 61 ATRAIVFSGCGRATTKTVTCAEILKRRLAGLHQVTRLRYRSVREVWQSLPPGPTQGQTPG 120
Query: 108 -----LTVRRHVPAVWVLLSRDPLDPNECGYQPPGAPPGLGSMPSSSCGPRS 154
L+V ++VP + +LLS+D LDP + GYQPP PG S P++ RS
Sbjct: 121 EPAASLSVLKNVPGLAILLSKDALDPRQPGYQPPNPHPGPSSPPAAPASKRS 172
>gi|148727370 immediate early response 5-like [Homo sapiens]
Length = 404
Score = 33.9 bits (76), Expect = 0.064
Identities = 19/51 (37%), Positives = 22/51 (43%)
Query: 104 GLDPLTVRRHVPAVWVLLSRDPLDPNECGYQPPGAPPGLGSMPSSSCGPRS 154
G PL + PA L RDP P C P APP + P +S P S
Sbjct: 181 GPAPLPLPLPPPAPAALCPRDPRAPAACSAPPGAAPPAAAASPPASPAPAS 231
>gi|7657693 zinc finger protein 324 [Homo sapiens]
Length = 553
Score = 33.9 bits (76), Expect = 0.064
Identities = 20/53 (37%), Positives = 24/53 (45%), Gaps = 7/53 (13%)
Query: 93 EDSWVPASPDTGLDPLTVRRHVPAVWVLLSRDPLDPNECGYQP---PGAPPGL 142
E+ WVP+ DT L T RR P W L D + G P P PPG+
Sbjct: 57 EEPWVPSGTDTTLSRTTYRRRNPGSWSLTE----DRDVSGEWPRAFPDTPPGM 105
>gi|15812178 zinc finger protein 36, C3H type-like 2 [Homo sapiens]
Length = 494
Score = 30.8 bits (68), Expect = 0.54
Identities = 18/58 (31%), Positives = 27/58 (46%)
Query: 97 VPASPDTGLDPLTVRRHVPAVWVLLSRDPLDPNECGYQPPGAPPGLGSMPSSSCGPRS 154
V A+P +G P +RRH + L+ P C + PGA G +++ GP S
Sbjct: 40 VAAAPSSGFAPGFLRRHSASNLHALAHPAPSPGSCSPKFPGAANGSSCGSAAAGGPTS 97
>gi|239746480 PREDICTED: hypothetical protein XP_002343771 [Homo
sapiens]
Length = 130
Score = 30.4 bits (67), Expect = 0.71
Identities = 17/58 (29%), Positives = 26/58 (44%), Gaps = 1/58 (1%)
Query: 107 PLTVRRHVPAVWVLLSRDPLDPNECGYQPPGAPPGLGSMPSSSCG-PRSRRRARDTRS 163
P P+ W L S P P C +PP + G++P+++C R + RD S
Sbjct: 38 PAAATTAAPSAWGLSSNIPSGPAGCAPRPPTSFSLPGALPTTTCAKARENLQLRDVLS 95
>gi|4504379 leucine-rich repeat-containing G protein-coupled
receptor 5 [Homo sapiens]
Length = 907
Score = 30.0 bits (66), Expect = 0.92
Identities = 25/86 (29%), Positives = 36/86 (41%), Gaps = 11/86 (12%)
Query: 71 AEIVKRRVPGLHQLTKLRFLQTEDSWVPASPDTGLDPLTV-------RRHVPAVWVLLSR 123
++++ +P L L +LR +++P TGL L V RHVP + R
Sbjct: 79 SQLLPNPLPSLRFLEELRLAGNALTYIPKGAFTGLYSLKVLMLQNNQLRHVPTEALQNLR 138
Query: 124 D----PLDPNECGYQPPGAPPGLGSM 145
LD N Y PP GL S+
Sbjct: 139 SLQSLRLDANHISYVPPSCFSGLHSL 164
>gi|30089935 transmembrane protein 132A isoform a [Homo sapiens]
Length = 1024
Score = 30.0 bits (66), Expect = 0.92
Identities = 19/52 (36%), Positives = 24/52 (46%), Gaps = 4/52 (7%)
Query: 101 PDTGLDPLTVRRHVPAVWVLLSRDPLD-PNECGYQPPGAPPGLGSMPSSSCG 151
PD+ DP + + H WV L D + + Q PG P G GS P S G
Sbjct: 882 PDSATDPTSPQPHN---WVWLGTDQEELSRQLDRQSPGPPKGEGSCPCESGG 930
>gi|30089937 transmembrane protein 132A isoform b [Homo sapiens]
Length = 1023
Score = 30.0 bits (66), Expect = 0.92
Identities = 19/52 (36%), Positives = 24/52 (46%), Gaps = 4/52 (7%)
Query: 101 PDTGLDPLTVRRHVPAVWVLLSRDPLD-PNECGYQPPGAPPGLGSMPSSSCG 151
PD+ DP + + H WV L D + + Q PG P G GS P S G
Sbjct: 881 PDSATDPTSPQPHN---WVWLGTDQEELSRQLDRQSPGPPKGEGSCPCESGG 929
>gi|40254834 kinesin family member 1C [Homo sapiens]
Length = 1103
Score = 29.6 bits (65), Expect = 1.2
Identities = 33/112 (29%), Positives = 45/112 (40%), Gaps = 11/112 (9%)
Query: 44 LGRLEGGSARHVVFSGSGRAAGKAVSCAEIVKRRVPGLHQLTKLRFLQTEDSWVPASPDT 103
+G EGG A GSG + + AE+ R + KL + E +S D
Sbjct: 807 VGEEEGGGA------GSGGGSEEGARGAEVEDLRA----HIDKLTGILQEVKLQNSSKDR 856
Query: 104 GLDPLTVRRHVPAVWVLLSRDPLDPNECGYQPPGAPPGLGSMPSSSCGPRSR 155
L L R + L++D D NE G + P APP GS + P R
Sbjct: 857 ELQALRDRMLRMERVIPLAQDHEDENEEGGEVPWAPPE-GSEAAEEAAPSDR 907
>gi|144922631 tigger transposable element derived 5 [Homo sapiens]
Length = 593
Score = 29.3 bits (64), Expect = 1.6
Identities = 17/50 (34%), Positives = 21/50 (42%), Gaps = 5/50 (10%)
Query: 116 AVWVLLSRDPLDPNECGYQ-----PPGAPPGLGSMPSSSCGPRSRRRARD 160
A W+ L D P C + PP APP S+PS+ G A D
Sbjct: 481 AEWLHLDDDGGPPEGCREEVGPALPPAAPPAPASLPSAMGGGEDEEEATD 530
>gi|18079216 CASK interacting protein 1 [Homo sapiens]
Length = 1431
Score = 28.9 bits (63), Expect = 2.1
Identities = 37/161 (22%), Positives = 54/161 (33%), Gaps = 28/161 (17%)
Query: 6 KAGSVELPAPSP-----------MPQLPPDTLEMRVRDGSKIRNLLGLALGRLEGGSARH 54
+AG ELP P P +P LPP E R + S +
Sbjct: 1185 QAGPPELPPPPPPAEPPPTDLAHLPPLPPPEGEARKPAKPPV--------------SPKP 1230
Query: 55 VVFSGSGRAAGKAVSCAEIVKRRVPGLHQLTKLRFLQTEDSWVPASPDTGLDPLTVRRHV 114
V+ + G ++ V PG ++ + S P P T P+ +
Sbjct: 1231 VLTQPVPKLQGSPTPTSKKVPLPGPGSPEVKRAHGTPPPVSPKPPPPPTAPKPVKAVAGL 1290
Query: 115 PAVWVLLSRDPL---DPNECGYQPPGAPPGLGSMPSSSCGP 152
P+ S P P +PPG PP LG+ P+ P
Sbjct: 1291 PSGSAGPSPAPSPARQPPAALAKPPGTPPSLGASPAKPPSP 1331
>gi|18252045 ADAM metallopeptidase domain 33 isoform alpha
preproprotein [Homo sapiens]
Length = 813
Score = 28.9 bits (63), Expect = 2.1
Identities = 16/34 (47%), Positives = 20/34 (58%), Gaps = 5/34 (14%)
Query: 131 CGYQPPGAPPGLGSMPSSSCGP--RSRRRARDTR 162
CG++ PG G+ S+P GP R RR AR TR
Sbjct: 179 CGHRDPGNKAGMTSLPG---GPQSRGRREARRTR 209
>gi|24041040 ADAM metallopeptidase domain 33 isoform beta
preproprotein [Homo sapiens]
Length = 787
Score = 28.9 bits (63), Expect = 2.1
Identities = 16/34 (47%), Positives = 20/34 (58%), Gaps = 5/34 (14%)
Query: 131 CGYQPPGAPPGLGSMPSSSCGP--RSRRRARDTR 162
CG++ PG G+ S+P GP R RR AR TR
Sbjct: 179 CGHRDPGNKAGMTSLPG---GPQSRGRREARRTR 209
>gi|33457336 chromosome 14 open reading frame 4 [Homo sapiens]
Length = 796
Score = 28.9 bits (63), Expect = 2.1
Identities = 15/34 (44%), Positives = 17/34 (50%)
Query: 114 VPAVWVLLSRDPLDPNECGYQPPGAPPGLGSMPS 147
+P V LSR P P G PP AP G G+ S
Sbjct: 507 LPTALVSLSRAPSAPPGTGALPPAAPSGRGAAAS 540
>gi|21359873 polo-like kinase 1 [Homo sapiens]
Length = 603
Score = 28.5 bits (62), Expect = 2.7
Identities = 18/43 (41%), Positives = 21/43 (48%), Gaps = 6/43 (13%)
Query: 121 LSRDPLDPNECGYQ---PPGAP---PGLGSMPSSSCGPRSRRR 157
L+R P DP + G PGAP P +P PRSRRR
Sbjct: 10 LARAPADPGKAGVPGVAAPGAPAAAPPAKEIPEVLVDPRSRRR 52
>gi|37622341 zinc finger protein 42 isoform 2 [Homo sapiens]
Length = 734
Score = 28.5 bits (62), Expect = 2.7
Identities = 15/35 (42%), Positives = 15/35 (42%)
Query: 124 DPLDPNECGYQPPGAPPGLGSMPSSSCGPRSRRRA 158
DP P PPGAP G P S C RRA
Sbjct: 464 DPPGPGAKPPAPPGAPEPPGPFPCSECRESFARRA 498
>gi|37622345 zinc finger protein 42 isoform 1 [Homo sapiens]
Length = 734
Score = 28.5 bits (62), Expect = 2.7
Identities = 15/35 (42%), Positives = 15/35 (42%)
Query: 124 DPLDPNECGYQPPGAPPGLGSMPSSSCGPRSRRRA 158
DP P PPGAP G P S C RRA
Sbjct: 464 DPPGPGAKPPAPPGAPEPPGPFPCSECRESFARRA 498
>gi|7669528 neuregulin 2 isoform 2 [Homo sapiens]
Length = 844
Score = 28.5 bits (62), Expect = 2.7
Identities = 13/30 (43%), Positives = 16/30 (53%)
Query: 130 ECGYQPPGAPPGLGSMPSSSCGPRSRRRAR 159
EC PP P G+ +S GPR RR+R
Sbjct: 712 ECAPPPPPRPRARGASRRTSAGPRRWRRSR 741
>gi|7669532 neuregulin 2 isoform 4 [Homo sapiens]
Length = 852
Score = 28.5 bits (62), Expect = 2.7
Identities = 13/30 (43%), Positives = 16/30 (53%)
Query: 130 ECGYQPPGAPPGLGSMPSSSCGPRSRRRAR 159
EC PP P G+ +S GPR RR+R
Sbjct: 720 ECAPPPPPRPRARGASRRTSAGPRRWRRSR 749
>gi|7669530 neuregulin 2 isoform 3 [Homo sapiens]
Length = 858
Score = 28.5 bits (62), Expect = 2.7
Identities = 13/30 (43%), Positives = 16/30 (53%)
Query: 130 ECGYQPPGAPPGLGSMPSSSCGPRSRRRAR 159
EC PP P G+ +S GPR RR+R
Sbjct: 726 ECAPPPPPRPRARGASRRTSAGPRRWRRSR 755
>gi|4758832 neuregulin 2 isoform 1 [Homo sapiens]
Length = 850
Score = 28.5 bits (62), Expect = 2.7
Identities = 13/30 (43%), Positives = 16/30 (53%)
Query: 130 ECGYQPPGAPPGLGSMPSSSCGPRSRRRAR 159
EC PP P G+ +S GPR RR+R
Sbjct: 718 ECAPPPPPRPRARGASRRTSAGPRRWRRSR 747
>gi|122937496 WAS/WASL interacting protein family, member 3 [Homo
sapiens]
Length = 483
Score = 28.5 bits (62), Expect = 2.7
Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 2/34 (5%)
Query: 121 LSRDPLDPNECGYQPPGAPPGLGSMPSSSCGPRS 154
L +P P + +PP PP L P +SC PR+
Sbjct: 275 LKAEPASPAQDAQEPPAPPPPL--PPYASCSPRA 306
>gi|156071470 hyperpolarization activated cyclic nucleotide-gated
potassium channel 2 [Homo sapiens]
Length = 889
Score = 28.1 bits (61), Expect = 3.5
Identities = 15/40 (37%), Positives = 20/40 (50%), Gaps = 3/40 (7%)
Query: 125 PLDPNECGYQPPGAPPGLGSMPSSSC---GPRSRRRARDT 161
P P G PP PP ++P + GPR R R+RD+
Sbjct: 41 PAPPPGPGPAPPQHPPRAEALPPEAADEGGPRGRLRSRDS 80
>gi|21541824 transducin-like enhancer protein 1 [Homo sapiens]
Length = 770
Score = 28.1 bits (61), Expect = 3.5
Identities = 12/20 (60%), Positives = 13/20 (65%)
Query: 125 PLDPNECGYQPPGAPPGLGS 144
PL P+ G QPPG PP GS
Sbjct: 142 PLTPHPSGLQPPGIPPLGGS 161
>gi|56676337 transmembrane protein 28 [Homo sapiens]
Length = 472
Score = 28.1 bits (61), Expect = 3.5
Identities = 14/31 (45%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
Query: 123 RDPLDPNECGYQPPGAPPGLGSMPSSSCGPR 153
R P+ P PP PPG S P +CGPR
Sbjct: 88 RQPVPPRAVLPLPP-PPPGEPSAPPGTCGPR 117
>gi|166158925 endothelial cell growth factor 1 (platelet-derived)
precursor [Homo sapiens]
Length = 482
Score = 27.7 bits (60), Expect = 4.6
Identities = 13/29 (44%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Query: 8 GSVELPAPSPMPQLPPDTLEMRVRDGSKI 36
GS LP PSP P+ P+ + M+ RDG ++
Sbjct: 22 GSQGLPDPSPEPKQLPELIRMK-RDGGRL 49
>gi|4503445 endothelial cell growth factor 1 (platelet-derived)
precursor [Homo sapiens]
Length = 482
Score = 27.7 bits (60), Expect = 4.6
Identities = 13/29 (44%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Query: 8 GSVELPAPSPMPQLPPDTLEMRVRDGSKI 36
GS LP PSP P+ P+ + M+ RDG ++
Sbjct: 22 GSQGLPDPSPEPKQLPELIRMK-RDGGRL 49
>gi|166158922 endothelial cell growth factor 1 (platelet-derived)
precursor [Homo sapiens]
Length = 482
Score = 27.7 bits (60), Expect = 4.6
Identities = 13/29 (44%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Query: 8 GSVELPAPSPMPQLPPDTLEMRVRDGSKI 36
GS LP PSP P+ P+ + M+ RDG ++
Sbjct: 22 GSQGLPDPSPEPKQLPELIRMK-RDGGRL 49
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.136 0.421
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,365,524
Number of Sequences: 37866
Number of extensions: 448595
Number of successful extensions: 2352
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 36
Number of HSP's that attempted gapping in prelim test: 2307
Number of HSP's gapped (non-prelim): 76
length of query: 163
length of database: 18,247,518
effective HSP length: 94
effective length of query: 69
effective length of database: 14,688,114
effective search space: 1013479866
effective search space used: 1013479866
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.