Guide to the Human Genome
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Name: SLCO3A1 Sequence: fasta or formatted (692aa) NCBI GI: 222831573
Description:

solute carrier organic anion transporter family, member 3A1 isoform 2

Referenced in:

Solute Carrier Families

Other entries for this name:
alt prot [710aa] solute carrier organic anion transporter family, member 3A1 isofo...
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.1         56           2
 C cysteine            4.8         33           1
 D aspartate           3.3         23           2
 E glutamate           4.3         30           1
 F phenylalanine       5.3         37           2
 G glycine             9.5         66           3
 H histidine           1.2          8           1
 I isoleucine          5.8         40           2
 K lysine              3.6         25           6
 L leucine            12.0         83           3
 M methionine          2.2         15           2
 N asparagine          3.3         23           3
 P proline             5.5         38           3
 Q glutamine           3.0         21           2
 R arginine            3.6         25           2
 S serine              8.2         57           2
 T threonine           5.8         40           3
 V valine              6.2         43           2
 W tryptophan          0.9          6           2
 Y tyrosine            3.3         23           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   solute carrier organic anion transporter family, me... 
SLCO3A1               0.961   solute carrier organic anion transporter family, me...
SLCO1C1               0.281   solute carrier organic anion transporter family, memb...
SLCO2A1               0.280   solute carrier organic anion transporter family, me...
SLCO1C1               0.273   solute carrier organic anion transporter family, me...
SLCO5A1               0.269   solute carrier organic anion transporter family, me...
SLCO1B3               0.268   solute carrier organic anion transporter family, memb...
SLCO1A2               0.265   organic anion transporting polypeptide A 
SLCO1A2               0.265   organic anion transporting polypeptide A 
SLCO1B1               0.260   solute carrier organic anion transporter family, me...
SLCO2B1               0.260   solute carrier organic anion transporter family, me...
SLCO2B1               0.260   solute carrier organic anion transporter family, memb...
SLCO1C1               0.252   solute carrier organic anion transporter family, me...
SLCO4C1               0.241   solute carrier organic anion transporter family, mem...
SLCO4A1               0.236   solute carrier organic anion transporter family memb...
LST-3TM12             0.229   liver-specific organic anion transporter 3TM12 [Hom...
SLCO5A1               0.221   solute carrier organic anion transporter family, me...
SLCO1C1               0.216   solute carrier organic anion transporter family, me...
SLCO5A1               0.213   solute carrier organic anion transporter family, me...
SLCO2B1               0.194   solute carrier organic anion transporter family, me...
SLCO6A1               0.147   solute carrier organic anion transporter family, mem...
RECK                  0.009   RECK protein precursor 
KRTAP10-8             0.008   keratin associated protein 10-8 
CPAMD8                0.007   C3 and PZP-like, alpha-2-macroglobulin domain conta...
AGRN                  0.007   agrin 
TMEFF1                0.006   transmembrane protein with EGF-like and two follista...
LOC732428             0.006   PREDICTED: keratin-associated protein 9-2-like 2-li...
KRTAP10-2             0.006   keratin associated protein 10-2 
KRTAP10-1             0.006   keratin associated protein 10-1 
KRTAP10-10            0.006   keratin associated protein 10-10 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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