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Search of human proteins with 222418574
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|222418574 hypothetical protein LOC728591 isoform d [Homo
sapiens]
(112 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|222418576 hypothetical protein LOC728591 isoform d [Homo sapi... 224 1e-59
gi|222418574 hypothetical protein LOC728591 isoform d [Homo sapi... 224 1e-59
gi|222418565 hypothetical protein LOC728591 isoform a [Homo sapi... 224 1e-59
gi|222418570 hypothetical protein LOC728591 isoform b [Homo sapi... 157 2e-39
gi|222418567 hypothetical protein LOC728591 isoform b [Homo sapi... 157 2e-39
gi|222418572 hypothetical protein LOC728591 isoform c [Homo sapi... 150 2e-37
gi|148746195 trichohyalin [Homo sapiens] 37 0.003
gi|4885583 Rho-associated, coiled-coil containing protein kinase... 36 0.006
gi|68161546 misshapen/NIK-related kinase isoform 4 [Homo sapiens] 36 0.006
gi|24850117 misshapen/NIK-related kinase isoform 2 [Homo sapiens] 36 0.006
gi|27436917 misshapen/NIK-related kinase isoform 3 [Homo sapiens] 36 0.006
gi|7657335 misshapen/NIK-related kinase isoform 1 [Homo sapiens] 36 0.006
gi|109255234 centrosomal protein 290kDa [Homo sapiens] 36 0.008
gi|21735548 centrosomal protein 2 [Homo sapiens] 35 0.013
gi|30581135 structural maintenance of chromosomes 1A [Homo sapiens] 35 0.013
gi|14211893 lipopolysaccaride-specific response 5-like protein [... 33 0.037
gi|64085252 hypothetical protein LOC145508 [Homo sapiens] 33 0.037
gi|17865632 mitochondrial tumor suppressor 1 isoform 5 [Homo sap... 33 0.049
gi|50348611 mitochondrial tumor suppressor 1 isoform 1 [Homo sap... 33 0.049
gi|50348617 mitochondrial tumor suppressor 1 isoform 2 [Homo sap... 33 0.049
gi|50348626 mitochondrial tumor suppressor 1 isoform 4 [Homo sap... 33 0.049
gi|115527082 myosin, heavy chain 1, skeletal muscle, adult [Homo... 33 0.049
gi|150010558 myosin, heavy polypeptide 15 [Homo sapiens] 33 0.064
gi|62821790 leucine zipper protein 2 [Homo sapiens] 32 0.11
gi|33946313 ninein isoform 4 [Homo sapiens] 32 0.11
gi|33946321 ninein isoform 5 [Homo sapiens] 32 0.11
gi|148536871 ninein isoform 1 [Homo sapiens] 32 0.11
gi|148536869 ninein isoform 2 [Homo sapiens] 32 0.11
gi|22538387 A-kinase anchor protein 9 isoform 2 [Homo sapiens] 32 0.14
gi|22538393 A-kinase anchor protein 9 isoform 3 [Homo sapiens] 32 0.14
>gi|222418576 hypothetical protein LOC728591 isoform d [Homo
sapiens]
Length = 112
Score = 224 bits (570), Expect = 1e-59
Identities = 112/112 (100%), Positives = 112/112 (100%)
Query: 1 MPVESLNTLLKQLEEEKKTLESQVKYYALKLEQESKAYQKINNERRTYLAEMSQGSGLHQ 60
MPVESLNTLLKQLEEEKKTLESQVKYYALKLEQESKAYQKINNERRTYLAEMSQGSGLHQ
Sbjct: 1 MPVESLNTLLKQLEEEKKTLESQVKYYALKLEQESKAYQKINNERRTYLAEMSQGSGLHQ 60
Query: 61 VSKRQQVDQLPRMQENLVKTGRYNPAKQKTVSAKRGPVKKITRPNHLPELHP 112
VSKRQQVDQLPRMQENLVKTGRYNPAKQKTVSAKRGPVKKITRPNHLPELHP
Sbjct: 61 VSKRQQVDQLPRMQENLVKTGRYNPAKQKTVSAKRGPVKKITRPNHLPELHP 112
>gi|222418574 hypothetical protein LOC728591 isoform d [Homo
sapiens]
Length = 112
Score = 224 bits (570), Expect = 1e-59
Identities = 112/112 (100%), Positives = 112/112 (100%)
Query: 1 MPVESLNTLLKQLEEEKKTLESQVKYYALKLEQESKAYQKINNERRTYLAEMSQGSGLHQ 60
MPVESLNTLLKQLEEEKKTLESQVKYYALKLEQESKAYQKINNERRTYLAEMSQGSGLHQ
Sbjct: 1 MPVESLNTLLKQLEEEKKTLESQVKYYALKLEQESKAYQKINNERRTYLAEMSQGSGLHQ 60
Query: 61 VSKRQQVDQLPRMQENLVKTGRYNPAKQKTVSAKRGPVKKITRPNHLPELHP 112
VSKRQQVDQLPRMQENLVKTGRYNPAKQKTVSAKRGPVKKITRPNHLPELHP
Sbjct: 61 VSKRQQVDQLPRMQENLVKTGRYNPAKQKTVSAKRGPVKKITRPNHLPELHP 112
>gi|222418565 hypothetical protein LOC728591 isoform a [Homo
sapiens]
Length = 214
Score = 224 bits (570), Expect = 1e-59
Identities = 112/112 (100%), Positives = 112/112 (100%)
Query: 1 MPVESLNTLLKQLEEEKKTLESQVKYYALKLEQESKAYQKINNERRTYLAEMSQGSGLHQ 60
MPVESLNTLLKQLEEEKKTLESQVKYYALKLEQESKAYQKINNERRTYLAEMSQGSGLHQ
Sbjct: 103 MPVESLNTLLKQLEEEKKTLESQVKYYALKLEQESKAYQKINNERRTYLAEMSQGSGLHQ 162
Query: 61 VSKRQQVDQLPRMQENLVKTGRYNPAKQKTVSAKRGPVKKITRPNHLPELHP 112
VSKRQQVDQLPRMQENLVKTGRYNPAKQKTVSAKRGPVKKITRPNHLPELHP
Sbjct: 163 VSKRQQVDQLPRMQENLVKTGRYNPAKQKTVSAKRGPVKKITRPNHLPELHP 214
>gi|222418570 hypothetical protein LOC728591 isoform b [Homo
sapiens]
Length = 139
Score = 157 bits (396), Expect = 2e-39
Identities = 80/80 (100%), Positives = 80/80 (100%)
Query: 1 MPVESLNTLLKQLEEEKKTLESQVKYYALKLEQESKAYQKINNERRTYLAEMSQGSGLHQ 60
MPVESLNTLLKQLEEEKKTLESQVKYYALKLEQESKAYQKINNERRTYLAEMSQGSGLHQ
Sbjct: 1 MPVESLNTLLKQLEEEKKTLESQVKYYALKLEQESKAYQKINNERRTYLAEMSQGSGLHQ 60
Query: 61 VSKRQQVDQLPRMQENLVKT 80
VSKRQQVDQLPRMQENLVKT
Sbjct: 61 VSKRQQVDQLPRMQENLVKT 80
>gi|222418567 hypothetical protein LOC728591 isoform b [Homo
sapiens]
Length = 139
Score = 157 bits (396), Expect = 2e-39
Identities = 80/80 (100%), Positives = 80/80 (100%)
Query: 1 MPVESLNTLLKQLEEEKKTLESQVKYYALKLEQESKAYQKINNERRTYLAEMSQGSGLHQ 60
MPVESLNTLLKQLEEEKKTLESQVKYYALKLEQESKAYQKINNERRTYLAEMSQGSGLHQ
Sbjct: 1 MPVESLNTLLKQLEEEKKTLESQVKYYALKLEQESKAYQKINNERRTYLAEMSQGSGLHQ 60
Query: 61 VSKRQQVDQLPRMQENLVKT 80
VSKRQQVDQLPRMQENLVKT
Sbjct: 61 VSKRQQVDQLPRMQENLVKT 80
>gi|222418572 hypothetical protein LOC728591 isoform c [Homo
sapiens]
Length = 141
Score = 150 bits (380), Expect = 2e-37
Identities = 77/77 (100%), Positives = 77/77 (100%)
Query: 4 ESLNTLLKQLEEEKKTLESQVKYYALKLEQESKAYQKINNERRTYLAEMSQGSGLHQVSK 63
ESLNTLLKQLEEEKKTLESQVKYYALKLEQESKAYQKINNERRTYLAEMSQGSGLHQVSK
Sbjct: 6 ESLNTLLKQLEEEKKTLESQVKYYALKLEQESKAYQKINNERRTYLAEMSQGSGLHQVSK 65
Query: 64 RQQVDQLPRMQENLVKT 80
RQQVDQLPRMQENLVKT
Sbjct: 66 RQQVDQLPRMQENLVKT 82
>gi|148746195 trichohyalin [Homo sapiens]
Length = 1943
Score = 37.4 bits (85), Expect = 0.003
Identities = 28/88 (31%), Positives = 44/88 (50%), Gaps = 4/88 (4%)
Query: 4 ESLNTLLKQLEEEKKTLESQVKYYALKLEQESKAYQ--KINNERRTYLAEMSQGSGLHQV 61
E LLK+ EE+K LE + + LK EQE + Q K ERR + Q L Q
Sbjct: 544 ERREQLLKR--EEEKRLEQERREQRLKREQEERRDQLLKREEERRQQRLKREQEERLEQR 601
Query: 62 SKRQQVDQLPRMQENLVKTGRYNPAKQK 89
KR++V++L + + + R P +++
Sbjct: 602 LKREEVERLEQEERREQRLKREEPEEER 629
>gi|4885583 Rho-associated, coiled-coil containing protein kinase 1
[Homo sapiens]
Length = 1354
Score = 36.2 bits (82), Expect = 0.006
Identities = 21/75 (28%), Positives = 43/75 (57%), Gaps = 5/75 (6%)
Query: 5 SLNTLLKQLEEEKKTLESQVKYYALKLEQESKAYQKINNERRTYLAEMSQGSGLHQVSKR 64
+L + + Q+E+EK L+ ++ Y K EQE++ + + NE T ++ L +VS+
Sbjct: 476 NLESTVSQIEKEKMLLQHRINEYQRKAEQENEKRRNVENEVSTLKDQLED---LKKVSQN 532
Query: 65 QQV--DQLPRMQENL 77
Q+ ++L ++Q+ L
Sbjct: 533 SQLANEKLSQLQKQL 547
Score = 34.3 bits (77), Expect = 0.022
Identities = 19/56 (33%), Positives = 29/56 (51%)
Query: 10 LKQLEEEKKTLESQVKYYALKLEQESKAYQKINNERRTYLAEMSQGSGLHQVSKRQ 65
L+ L K+ +E +VK L+LEQES + NE +T E GL + K++
Sbjct: 755 LEHLTGNKERMEDEVKNLTLQLEQESNKRLLLQNELKTQAFEADNLKGLEKQMKQE 810
>gi|68161546 misshapen/NIK-related kinase isoform 4 [Homo sapiens]
Length = 1312
Score = 36.2 bits (82), Expect = 0.006
Identities = 23/85 (27%), Positives = 41/85 (48%), Gaps = 1/85 (1%)
Query: 3 VESLNTLLKQLEEEKKTLESQVKYYALKLEQESKAYQKINNERRTYLAEMSQGSGLHQVS 62
+E + L ++ E + E + K L+ +++S+ Q+ + YL + Q Q+
Sbjct: 430 LEDMQALRREEERRQAEREQEYKRKQLEEQRQSERLQRQLQQEHAYLKSLQQQQQQQQLQ 489
Query: 63 KRQQVDQLPRMQENLVKTGR-YNPA 86
K+QQ LP ++ L GR NPA
Sbjct: 490 KQQQQQLLPGDRKPLYHYGRGMNPA 514
>gi|24850117 misshapen/NIK-related kinase isoform 2 [Homo sapiens]
Length = 1303
Score = 36.2 bits (82), Expect = 0.006
Identities = 23/85 (27%), Positives = 41/85 (48%), Gaps = 1/85 (1%)
Query: 3 VESLNTLLKQLEEEKKTLESQVKYYALKLEQESKAYQKINNERRTYLAEMSQGSGLHQVS 62
+E + L ++ E + E + K L+ +++S+ Q+ + YL + Q Q+
Sbjct: 430 LEDMQALRREEERRQAEREQEYKRKQLEEQRQSERLQRQLQQEHAYLKSLQQQQQQQQLQ 489
Query: 63 KRQQVDQLPRMQENLVKTGR-YNPA 86
K+QQ LP ++ L GR NPA
Sbjct: 490 KQQQQQLLPGDRKPLYHYGRGMNPA 514
>gi|27436917 misshapen/NIK-related kinase isoform 3 [Homo sapiens]
Length = 1332
Score = 36.2 bits (82), Expect = 0.006
Identities = 23/85 (27%), Positives = 41/85 (48%), Gaps = 1/85 (1%)
Query: 3 VESLNTLLKQLEEEKKTLESQVKYYALKLEQESKAYQKINNERRTYLAEMSQGSGLHQVS 62
+E + L ++ E + E + K L+ +++S+ Q+ + YL + Q Q+
Sbjct: 430 LEDMQALRREEERRQAEREQEYKRKQLEEQRQSERLQRQLQQEHAYLKSLQQQQQQQQLQ 489
Query: 63 KRQQVDQLPRMQENLVKTGR-YNPA 86
K+QQ LP ++ L GR NPA
Sbjct: 490 KQQQQQLLPGDRKPLYHYGRGMNPA 514
>gi|7657335 misshapen/NIK-related kinase isoform 1 [Homo sapiens]
Length = 1295
Score = 36.2 bits (82), Expect = 0.006
Identities = 23/85 (27%), Positives = 41/85 (48%), Gaps = 1/85 (1%)
Query: 3 VESLNTLLKQLEEEKKTLESQVKYYALKLEQESKAYQKINNERRTYLAEMSQGSGLHQVS 62
+E + L ++ E + E + K L+ +++S+ Q+ + YL + Q Q+
Sbjct: 430 LEDMQALRREEERRQAEREQEYKRKQLEEQRQSERLQRQLQQEHAYLKSLQQQQQQQQLQ 489
Query: 63 KRQQVDQLPRMQENLVKTGR-YNPA 86
K+QQ LP ++ L GR NPA
Sbjct: 490 KQQQQQLLPGDRKPLYHYGRGMNPA 514
>gi|109255234 centrosomal protein 290kDa [Homo sapiens]
Length = 2479
Score = 35.8 bits (81), Expect = 0.008
Identities = 28/89 (31%), Positives = 49/89 (55%), Gaps = 4/89 (4%)
Query: 4 ESLNTLLKQLEEEKKTLESQVKYYALKLEQES---KAYQKINNERRTYLAEMSQGSGLHQ 60
E+ T K ++EEK+ LE QV+ A+K+++ + A Q ++E + LAE S+ + Q
Sbjct: 831 ETWKTESKTIKEEKRKLEDQVQQDAIKVKEYNNLLNALQMDSDEMKKILAENSRKITVLQ 890
Query: 61 VSKRQQVDQLPRMQENLVKTGRYNPAKQK 89
V+++ + Q + E L + R KQK
Sbjct: 891 VNEKSLIRQYTTLVE-LERQLRKENEKQK 918
>gi|21735548 centrosomal protein 2 [Homo sapiens]
Length = 2442
Score = 35.0 bits (79), Expect = 0.013
Identities = 22/83 (26%), Positives = 43/83 (51%), Gaps = 6/83 (7%)
Query: 3 VESLNTLLKQLEEEKKTLESQVKYYALKLEQESKAYQKINNE------RRTYLAEMSQGS 56
+E L+K+LE +++T + + L LE+ S+ Q +++ T LA Q
Sbjct: 1569 MECQQKLIKELEGQRETQRVALTHLTLDLEERSQELQAQSSQIHDLESHSTVLARELQER 1628
Query: 57 GLHQVSKRQQVDQLPRMQENLVK 79
S+R+Q+++L R +E+L +
Sbjct: 1629 DQEVKSQREQIEELQRQKEHLTQ 1651
>gi|30581135 structural maintenance of chromosomes 1A [Homo sapiens]
Length = 1233
Score = 35.0 bits (79), Expect = 0.013
Identities = 23/82 (28%), Positives = 40/82 (48%), Gaps = 6/82 (7%)
Query: 4 ESLNTLLKQLEEEKKTLESQVKYYALK------LEQESKAYQKINNERRTYLAEMSQGSG 57
E+ + +K+LE KK+L++ K+Y + LE+E + +K E + E SQ G
Sbjct: 303 ENTSHKIKKLEAAKKSLQNAQKHYKKRKGDMDELEKEMLSVEKARQEFEERMEEESQSQG 362
Query: 58 LHQVSKRQQVDQLPRMQENLVK 79
+ QV + R++E K
Sbjct: 363 RDLTLEENQVKKYHRLKEEASK 384
>gi|14211893 lipopolysaccaride-specific response 5-like protein
[Homo sapiens]
Length = 181
Score = 33.5 bits (75), Expect = 0.037
Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 4/55 (7%)
Query: 4 ESLNTLLKQLEEEKKTLESQVKYYALKLEQESKAYQKINNERRTYLAEMSQGSGL 58
E+ NT L Q+ EEK + K + +KLE+ K Y+ + ER E+S+ G+
Sbjct: 62 ENNNTTLLQMAEEKTIRDKNYKVFQIKLERLEKLYKALQIERN----ELSEKLGI 112
>gi|64085252 hypothetical protein LOC145508 [Homo sapiens]
Length = 1094
Score = 33.5 bits (75), Expect = 0.037
Identities = 17/97 (17%), Positives = 50/97 (51%)
Query: 10 LKQLEEEKKTLESQVKYYALKLEQESKAYQKINNERRTYLAEMSQGSGLHQVSKRQQVDQ 69
LK+++ T E++ K+ L++ + ++ + + YL+E+ Q L + +++++ D
Sbjct: 423 LKEIQNHFDTCEAERKHADLQISELTRHAEDATKQAERYLSELQQSEALKEEAEKRREDL 482
Query: 70 LPRMQENLVKTGRYNPAKQKTVSAKRGPVKKITRPNH 106
+ QE++ + + ++ + + V ++T N+
Sbjct: 483 KLKAQESIRQWKLKHKKLERALEKQSETVDELTGKNN 519
>gi|17865632 mitochondrial tumor suppressor 1 isoform 5 [Homo
sapiens]
Length = 436
Score = 33.1 bits (74), Expect = 0.049
Identities = 21/78 (26%), Positives = 39/78 (50%), Gaps = 5/78 (6%)
Query: 7 NTLLKQLEEEKKTLESQ-----VKYYALKLEQESKAYQKINNERRTYLAEMSQGSGLHQV 61
+T +++ E+ K L+ Q + KLE E+ +K+ ++ Y A +S+ H++
Sbjct: 186 DTYIEEAEKYKMQLQEQFDNLNAAHETSKLEIEASHSEKLELLKKAYEASLSEIKKGHEI 245
Query: 62 SKRQQVDQLPRMQENLVK 79
K+ D L QE+L K
Sbjct: 246 EKKSLEDLLSEKQESLEK 263
>gi|50348611 mitochondrial tumor suppressor 1 isoform 1 [Homo sapiens]
Length = 1270
Score = 33.1 bits (74), Expect = 0.049
Identities = 21/78 (26%), Positives = 39/78 (50%), Gaps = 5/78 (6%)
Query: 7 NTLLKQLEEEKKTLESQ-----VKYYALKLEQESKAYQKINNERRTYLAEMSQGSGLHQV 61
+T +++ E+ K L+ Q + KLE E+ +K+ ++ Y A +S+ H++
Sbjct: 1020 DTYIEEAEKYKMQLQEQFDNLNAAHETSKLEIEASHSEKLELLKKAYEASLSEIKKGHEI 1079
Query: 62 SKRQQVDQLPRMQENLVK 79
K+ D L QE+L K
Sbjct: 1080 EKKSLEDLLSEKQESLEK 1097
>gi|50348617 mitochondrial tumor suppressor 1 isoform 2 [Homo sapiens]
Length = 1216
Score = 33.1 bits (74), Expect = 0.049
Identities = 21/78 (26%), Positives = 39/78 (50%), Gaps = 5/78 (6%)
Query: 7 NTLLKQLEEEKKTLESQ-----VKYYALKLEQESKAYQKINNERRTYLAEMSQGSGLHQV 61
+T +++ E+ K L+ Q + KLE E+ +K+ ++ Y A +S+ H++
Sbjct: 966 DTYIEEAEKYKMQLQEQFDNLNAAHETSKLEIEASHSEKLELLKKAYEASLSEIKKGHEI 1025
Query: 62 SKRQQVDQLPRMQENLVK 79
K+ D L QE+L K
Sbjct: 1026 EKKSLEDLLSEKQESLEK 1043
>gi|50348626 mitochondrial tumor suppressor 1 isoform 4 [Homo
sapiens]
Length = 517
Score = 33.1 bits (74), Expect = 0.049
Identities = 21/78 (26%), Positives = 39/78 (50%), Gaps = 5/78 (6%)
Query: 7 NTLLKQLEEEKKTLESQ-----VKYYALKLEQESKAYQKINNERRTYLAEMSQGSGLHQV 61
+T +++ E+ K L+ Q + KLE E+ +K+ ++ Y A +S+ H++
Sbjct: 267 DTYIEEAEKYKMQLQEQFDNLNAAHETSKLEIEASHSEKLELLKKAYEASLSEIKKGHEI 326
Query: 62 SKRQQVDQLPRMQENLVK 79
K+ D L QE+L K
Sbjct: 327 EKKSLEDLLSEKQESLEK 344
>gi|115527082 myosin, heavy chain 1, skeletal muscle, adult [Homo
sapiens]
Length = 1939
Score = 33.1 bits (74), Expect = 0.049
Identities = 19/70 (27%), Positives = 40/70 (57%), Gaps = 4/70 (5%)
Query: 10 LKQLEEEKKTLESQVKYYALKLEQESKAYQKINNERRTYLAEMSQGSGLHQVSKRQQVDQ 69
+K EEE++ L + + +L+ ES Y + +E+ T ++++S+G + + QQ+++
Sbjct: 1263 IKTKEEEQQRLINDLTAQRARLQTESGEYSRQLDEKDTLVSQLSRG----KQAFTQQIEE 1318
Query: 70 LPRMQENLVK 79
L R E +K
Sbjct: 1319 LKRQLEEEIK 1328
Score = 29.3 bits (64), Expect = 0.71
Identities = 18/78 (23%), Positives = 37/78 (47%), Gaps = 4/78 (5%)
Query: 3 VESLNTLLKQLEEEKKTLESQVKYYALKLEQESKAYQKINNERRTYLAEMSQGSGLHQVS 62
+ L + KQ+E+EK L++ ++ LE E +I E +E+ +
Sbjct: 1527 IHELEKIKKQVEQEKSELQAALEEAEASLEHEEGKILRIQLELNQVKSEVDR----KIAE 1582
Query: 63 KRQQVDQLPRMQENLVKT 80
K +++DQ+ R +V++
Sbjct: 1583 KDEEIDQMKRNHIRIVES 1600
>gi|150010558 myosin, heavy polypeptide 15 [Homo sapiens]
Length = 1946
Score = 32.7 bits (73), Expect = 0.064
Identities = 27/111 (24%), Positives = 50/111 (45%), Gaps = 13/111 (11%)
Query: 3 VESLNTLLKQLEEEKKTLESQVKYYALKLEQESKAYQKINNERRTYLAEMSQGSGLHQVS 62
++ L T+L + E+EK+T E +VK ++E ++ K+N + Q +
Sbjct: 966 IDDLETMLVKSEKEKRTTEHKVKNLTEEVEFLNEDISKLNRAAKVV-----------QEA 1014
Query: 63 KRQQVDQLPRMQENLVKTGRYNPAKQKTVSAKRGPV--KKITRPNHLPELH 111
+Q +D L +E L + N ++ V G + ++ R N ELH
Sbjct: 1015 HQQTLDDLHMEEEKLSSLSKANLKLEQQVDELEGALEQERKARMNCERELH 1065
Score = 30.0 bits (66), Expect = 0.41
Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 11/75 (14%)
Query: 3 VESLNTLLKQLEEEKKTLESQVKYYALKLEQESKAYQKINNERRTY---LAEMSQ----- 54
VE+ L+ QL++ K L++Q+K KLE E K+ ER LA++++
Sbjct: 1106 VENEKGLVAQLQKTVKELQTQIKDLKEKLEAERTTRAKMERERADLTQDLADLNERLEEV 1165
Query: 55 -GSGLHQ--VSKRQQ 66
GS L Q ++K+Q+
Sbjct: 1166 GGSSLAQLEITKKQE 1180
>gi|62821790 leucine zipper protein 2 [Homo sapiens]
Length = 346
Score = 32.0 bits (71), Expect = 0.11
Identities = 21/98 (21%), Positives = 48/98 (48%), Gaps = 7/98 (7%)
Query: 4 ESLNTLLKQLEEEKKTLESQVKYYALKLEQESKAYQKINNERRTYLAEMSQGS---GLHQ 60
E+L LK+ E+ + ++ + + ++E++SK + + NE ++ ++ G+ G+H
Sbjct: 92 EALQNQLKETSEKAEKHQATINFLKTEVERKSKMIRDLQNENKSLKNKLLSGNKLCGIHA 151
Query: 61 VSKRQQVDQLPRM----QENLVKTGRYNPAKQKTVSAK 94
++ QL + ++ L K + +QK AK
Sbjct: 152 EESKKIQAQLKELRYGKKDLLFKAQQLTDLEQKLAVAK 189
>gi|33946313 ninein isoform 4 [Homo sapiens]
Length = 2096
Score = 32.0 bits (71), Expect = 0.11
Identities = 25/85 (29%), Positives = 45/85 (52%), Gaps = 5/85 (5%)
Query: 13 LEEEKKTLESQVKYYALKLEQESKAYQKINNERRTYLAEMSQGSGLHQVSKRQQVDQ--L 70
L ++K L S K L E++ +Q+ NER + + ++ H K +Q++ L
Sbjct: 1835 LHNQQKRL-SWDKLDHLMNEEQQLLWQE--NERLQTMVQNTKAELTHSREKVRQLESNLL 1891
Query: 71 PRMQENLVKTGRYNPAKQKTVSAKR 95
P+ Q++L +G NP +Q+ +S KR
Sbjct: 1892 PKHQKHLNPSGTMNPTEQEKLSLKR 1916
>gi|33946321 ninein isoform 5 [Homo sapiens]
Length = 2090
Score = 32.0 bits (71), Expect = 0.11
Identities = 25/85 (29%), Positives = 45/85 (52%), Gaps = 5/85 (5%)
Query: 13 LEEEKKTLESQVKYYALKLEQESKAYQKINNERRTYLAEMSQGSGLHQVSKRQQVDQ--L 70
L ++K L S K L E++ +Q+ NER + + ++ H K +Q++ L
Sbjct: 1829 LHNQQKRL-SWDKLDHLMNEEQQLLWQE--NERLQTMVQNTKAELTHSREKVRQLESNLL 1885
Query: 71 PRMQENLVKTGRYNPAKQKTVSAKR 95
P+ Q++L +G NP +Q+ +S KR
Sbjct: 1886 PKHQKHLNPSGTMNPTEQEKLSLKR 1910
>gi|148536871 ninein isoform 1 [Homo sapiens]
Length = 2046
Score = 32.0 bits (71), Expect = 0.11
Identities = 25/85 (29%), Positives = 45/85 (52%), Gaps = 5/85 (5%)
Query: 13 LEEEKKTLESQVKYYALKLEQESKAYQKINNERRTYLAEMSQGSGLHQVSKRQQVDQ--L 70
L ++K L S K L E++ +Q+ NER + + ++ H K +Q++ L
Sbjct: 1829 LHNQQKRL-SWDKLDHLMNEEQQLLWQE--NERLQTMVQNTKAELTHSREKVRQLESNLL 1885
Query: 71 PRMQENLVKTGRYNPAKQKTVSAKR 95
P+ Q++L +G NP +Q+ +S KR
Sbjct: 1886 PKHQKHLNPSGTMNPTEQEKLSLKR 1910
>gi|148536869 ninein isoform 2 [Homo sapiens]
Length = 2133
Score = 32.0 bits (71), Expect = 0.11
Identities = 25/85 (29%), Positives = 45/85 (52%), Gaps = 5/85 (5%)
Query: 13 LEEEKKTLESQVKYYALKLEQESKAYQKINNERRTYLAEMSQGSGLHQVSKRQQVDQ--L 70
L ++K L S K L E++ +Q+ NER + + ++ H K +Q++ L
Sbjct: 1829 LHNQQKRL-SWDKLDHLMNEEQQLLWQE--NERLQTMVQNTKAELTHSREKVRQLESNLL 1885
Query: 71 PRMQENLVKTGRYNPAKQKTVSAKR 95
P+ Q++L +G NP +Q+ +S KR
Sbjct: 1886 PKHQKHLNPSGTMNPTEQEKLSLKR 1910
>gi|22538387 A-kinase anchor protein 9 isoform 2 [Homo sapiens]
Length = 3907
Score = 31.6 bits (70), Expect = 0.14
Identities = 18/62 (29%), Positives = 33/62 (53%)
Query: 9 LLKQLEEEKKTLESQVKYYALKLEQESKAYQKINNERRTYLAEMSQGSGLHQVSKRQQVD 68
+L+Q E+EK TLE +V+ LK E K ++ N+ + A++ + + + K+ D
Sbjct: 730 ILRQEEKEKGTLEQEVQELQLKTELLEKQMKEKENDLQEKFAQLEAENSILKDEKKTLED 789
Query: 69 QL 70
L
Sbjct: 790 ML 791
Score = 26.9 bits (58), Expect = 3.5
Identities = 27/80 (33%), Positives = 39/80 (48%), Gaps = 7/80 (8%)
Query: 3 VESLNTLLKQLEEEKKTLESQVKYYA---LKLEQESKAYQKINNERRTYLAEMSQGSGLH 59
+E LNT K +EEEKKTLE + K L E + + QK N E + E++
Sbjct: 331 IEELNT--KIIEEEKKTLELKDKLTTADKLLGELQEQIVQK-NQEIKNMKLELTNSKQKE 387
Query: 60 QVSKRQQVDQLPRMQENLVK 79
+ S +++ QL E L K
Sbjct: 388 RQSS-EEIKQLMGTVEELQK 406
>gi|22538393 A-kinase anchor protein 9 isoform 3 [Homo sapiens]
Length = 3899
Score = 31.6 bits (70), Expect = 0.14
Identities = 18/62 (29%), Positives = 33/62 (53%)
Query: 9 LLKQLEEEKKTLESQVKYYALKLEQESKAYQKINNERRTYLAEMSQGSGLHQVSKRQQVD 68
+L+Q E+EK TLE +V+ LK E K ++ N+ + A++ + + + K+ D
Sbjct: 730 ILRQEEKEKGTLEQEVQELQLKTELLEKQMKEKENDLQEKFAQLEAENSILKDEKKTLED 789
Query: 69 QL 70
L
Sbjct: 790 ML 791
Score = 26.9 bits (58), Expect = 3.5
Identities = 27/80 (33%), Positives = 39/80 (48%), Gaps = 7/80 (8%)
Query: 3 VESLNTLLKQLEEEKKTLESQVKYYA---LKLEQESKAYQKINNERRTYLAEMSQGSGLH 59
+E LNT K +EEEKKTLE + K L E + + QK N E + E++
Sbjct: 331 IEELNT--KIIEEEKKTLELKDKLTTADKLLGELQEQIVQK-NQEIKNMKLELTNSKQKE 387
Query: 60 QVSKRQQVDQLPRMQENLVK 79
+ S +++ QL E L K
Sbjct: 388 RQSS-EEIKQLMGTVEELQK 406
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.308 0.125 0.335
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,961,584
Number of Sequences: 37866
Number of extensions: 151537
Number of successful extensions: 1366
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 120
Number of HSP's successfully gapped in prelim test: 125
Number of HSP's that attempted gapping in prelim test: 1025
Number of HSP's gapped (non-prelim): 468
length of query: 112
length of database: 18,247,518
effective HSP length: 82
effective length of query: 30
effective length of database: 15,142,506
effective search space: 454275180
effective search space used: 454275180
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.