Guide to the Human Genome
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Name: FITM2 Sequence: fasta or formatted (262aa) NCBI GI: 122937337
Description:

fat storage-inducing transmembrane protein 2

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.1         16           2
 C cysteine            3.4          9           1
 D aspartate           1.1          3           1
 E glutamate           4.6         12           2
 F phenylalanine       5.7         15           1
 G glycine             6.5         17           2
 H histidine           4.2         11           1
 I isoleucine          3.8         10           1
 K lysine              4.6         12           2
 L leucine            15.6         41           3
 M methionine          1.9          5           1
 N asparagine          2.7          7           1
 P proline             3.4          9           2
 Q glutamine           3.1          8           2
 R arginine            3.8         10           2
 S serine              8.0         21           1
 T threonine           6.5         17           2
 V valine              6.9         18           2
 W tryptophan          3.4          9           1
 Y tyrosine            4.6         12           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   fat storage-inducing transmembrane protein 2 
FITM1                 0.220   fat-inducing transcript 1 
TAAR1                 0.013   trace amine associated receptor 1 
ADRB2                 0.010   adrenergic, beta-2-, receptor, surface 
IKZF3                 0.010   aiolos isoform 2 
IKZF3                 0.010   aiolos isoform 1 
SYNGR1                0.010   synaptogyrin 1 isoform 1c 
SYNGR1                0.010   synaptogyrin 1 isoform 1b 
SYNGR1                0.010   synaptogyrin 1 isoform 1a 
MEGF11                0.008   multiple EGF-like-domains 11 
ADRB3                 0.006   adrenergic, beta-3-, receptor 
ADRB1                 0.006   beta-1-adrenergic receptor 
GPR98                 0.006   G protein-coupled receptor 98 precursor 
SLC17A9               0.006   vesicular nucleotide transporter SLC17A9 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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