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Search of human proteins with 22035682
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|22035682 DBF4 homolog B isoform 1 [Homo sapiens]
(615 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|22035682 DBF4 homolog B isoform 1 [Homo sapiens] 1284 0.0
gi|13376671 DBF4 homolog B isoform 2 [Homo sapiens] 315 8e-86
gi|5729734 activator of S phase kinase [Homo sapiens] 181 1e-45
gi|115298682 HBxAg transactivated protein 2 [Homo sapiens] 40 0.008
gi|46409310 zinc finger protein 467 [Homo sapiens] 39 0.018
gi|16418451 hypothetical protein LOC116328 [Homo sapiens] 35 0.20
gi|239741939 PREDICTED: hypothetical protein XP_002342358 [Homo ... 35 0.27
gi|151301098 zinc finger, DBF-type containing 2 [Homo sapiens] 35 0.27
gi|59806361 hypothetical protein LOC387104 [Homo sapiens] 34 0.35
gi|239735519 SET binding factor 1 [Homo sapiens] 33 0.59
gi|4502079 adenosine monophosphate deaminase 3 isoform 1A [Homo ... 33 0.77
gi|70906428 adenosine monophosphate deaminase 3 isoform 1C [Homo... 33 0.77
gi|70906426 adenosine monophosphate deaminase 3 isoform 1B [Homo... 33 0.77
gi|217035133 hypothetical protein LOC55765 isoform 2 [Homo sapiens] 33 0.77
gi|217035131 hypothetical protein LOC55765 isoform 1 [Homo sapiens] 33 0.77
gi|4758258 eukaryotic translation initiation factor 4E binding p... 32 1.3
gi|4505959 POU domain, class 2, transcription factor 2 [Homo sap... 32 1.7
gi|73747881 zinc finger, ZZ type with EF hand domain 1 [Homo sap... 32 1.7
gi|162287219 prune homolog 2 [Homo sapiens] 32 2.2
gi|240255505 potassium channel, subfamily T, member 1 [Homo sapi... 32 2.2
gi|7661990 mastermind-like 1 [Homo sapiens] 32 2.2
gi|150418009 transforming, acidic coiled-coil containing protein... 32 2.2
gi|45827755 transforming, acidic coiled-coil containing protein ... 32 2.2
gi|45827753 transforming, acidic coiled-coil containing protein ... 32 2.2
gi|11119414 transforming, acidic coiled-coil containing protein ... 32 2.2
gi|189181720 proteoglycan 4 isoform B [Homo sapiens] 31 2.9
gi|67190163 proteoglycan 4 isoform A [Homo sapiens] 31 2.9
gi|239752994 PREDICTED: achaete-scute complex homolog 5 (Drosoph... 31 2.9
gi|239747548 PREDICTED: achaete-scute complex homolog 5 (Drosoph... 31 2.9
gi|239741422 PREDICTED: achaete-scute complex homolog 5 [Homo sa... 31 2.9
>gi|22035682 DBF4 homolog B isoform 1 [Homo sapiens]
Length = 615
Score = 1284 bits (3322), Expect = 0.0
Identities = 615/615 (100%), Positives = 615/615 (100%)
Query: 1 MSEPGKGDDCLELESSMAESRLRAPDLGVSRCLGKCQKNSPGARKHPFSGKSFYLDLPAG 60
MSEPGKGDDCLELESSMAESRLRAPDLGVSRCLGKCQKNSPGARKHPFSGKSFYLDLPAG
Sbjct: 1 MSEPGKGDDCLELESSMAESRLRAPDLGVSRCLGKCQKNSPGARKHPFSGKSFYLDLPAG 60
Query: 61 KNLQFLTGAIQQLGGVIEGFLSKEVSYIVSSRREVKAESSGKSHRGCPSPSPSEVRVETS 120
KNLQFLTGAIQQLGGVIEGFLSKEVSYIVSSRREVKAESSGKSHRGCPSPSPSEVRVETS
Sbjct: 61 KNLQFLTGAIQQLGGVIEGFLSKEVSYIVSSRREVKAESSGKSHRGCPSPSPSEVRVETS 120
Query: 121 AMVDPKGSHPRPSRKPVDSVPLSRGKELLQKAIRNQGSISGGGSGGSSSLLTNARSWGVR 180
AMVDPKGSHPRPSRKPVDSVPLSRGKELLQKAIRNQGSISGGGSGGSSSLLTNARSWGVR
Sbjct: 121 AMVDPKGSHPRPSRKPVDSVPLSRGKELLQKAIRNQGSISGGGSGGSSSLLTNARSWGVR 180
Query: 181 ILHVDEMMMHVQQLSLASLCVKKQQPKKPEGTCPAAESRTRKVARLKAPFLKIEDESRKF 240
ILHVDEMMMHVQQLSLASLCVKKQQPKKPEGTCPAAESRTRKVARLKAPFLKIEDESRKF
Sbjct: 181 ILHVDEMMMHVQQLSLASLCVKKQQPKKPEGTCPAAESRTRKVARLKAPFLKIEDESRKF 240
Query: 241 RPFHHQFKSFPEISFLGPKDASPFEAPTTLGSMHHTRESKDGEPSPRSAAHTMPRRKKGY 300
RPFHHQFKSFPEISFLGPKDASPFEAPTTLGSMHHTRESKDGEPSPRSAAHTMPRRKKGY
Sbjct: 241 RPFHHQFKSFPEISFLGPKDASPFEAPTTLGSMHHTRESKDGEPSPRSAAHTMPRRKKGY 300
Query: 301 CECCQEAFEELHVHLQSAQHRSFALEAHLYAEVDRIIAQLSHSFADIPFQAGLPRWSGSP 360
CECCQEAFEELHVHLQSAQHRSFALEAHLYAEVDRIIAQLSHSFADIPFQAGLPRWSGSP
Sbjct: 301 CECCQEAFEELHVHLQSAQHRSFALEAHLYAEVDRIIAQLSHSFADIPFQAGLPRWSGSP 360
Query: 361 ASDCDPLCPETLHPHQPSHPRAASPRIRKEDSCQASVTQGRAAGQQRWTESLDGVMGPPA 420
ASDCDPLCPETLHPHQPSHPRAASPRIRKEDSCQASVTQGRAAGQQRWTESLDGVMGPPA
Sbjct: 361 ASDCDPLCPETLHPHQPSHPRAASPRIRKEDSCQASVTQGRAAGQQRWTESLDGVMGPPA 420
Query: 421 SHTCVSATTLLPALPKGSREQGCLCPCPASFTQSHLVTSLALLPGEWSPAEDMPLHPSQE 480
SHTCVSATTLLPALPKGSREQGCLCPCPASFTQSHLVTSLALLPGEWSPAEDMPLHPSQE
Sbjct: 421 SHTCVSATTLLPALPKGSREQGCLCPCPASFTQSHLVTSLALLPGEWSPAEDMPLHPSQE 480
Query: 481 NSFAPADIPVKGPLLFPEARPWLMSARCWVRPFPFVTWGCLIPHDTTPLHEEVSPCPCLR 540
NSFAPADIPVKGPLLFPEARPWLMSARCWVRPFPFVTWGCLIPHDTTPLHEEVSPCPCLR
Sbjct: 481 NSFAPADIPVKGPLLFPEARPWLMSARCWVRPFPFVTWGCLIPHDTTPLHEEVSPCPCLR 540
Query: 541 LGYLYLLLTQSLWCRVRVPSLSTAGPIPRTSHPCTLAFPSYLNDHDLGHLCQAKPQGWNT 600
LGYLYLLLTQSLWCRVRVPSLSTAGPIPRTSHPCTLAFPSYLNDHDLGHLCQAKPQGWNT
Sbjct: 541 LGYLYLLLTQSLWCRVRVPSLSTAGPIPRTSHPCTLAFPSYLNDHDLGHLCQAKPQGWNT 600
Query: 601 PQPFLHCGFLAVDSG 615
PQPFLHCGFLAVDSG
Sbjct: 601 PQPFLHCGFLAVDSG 615
>gi|13376671 DBF4 homolog B isoform 2 [Homo sapiens]
Length = 170
Score = 315 bits (807), Expect = 8e-86
Identities = 160/167 (95%), Positives = 161/167 (96%), Gaps = 2/167 (1%)
Query: 1 MSEPGKGDDCLELESSMAESRLRAPDLGVSRCLGKCQKNSPGARKHPFSGKSFYLDLPAG 60
MSEPGKGDDCLELESSMAESRLRAPDLGVSRCLGKCQKNSPGARKHPFSGKSFYLDLPAG
Sbjct: 1 MSEPGKGDDCLELESSMAESRLRAPDLGVSRCLGKCQKNSPGARKHPFSGKSFYLDLPAG 60
Query: 61 KNLQFLTGAIQQLGGVIEGFLSKEVSYIVSSRREVKAESSGKSHRGCPSPSPSEVRVETS 120
KNLQFLTGAIQQLGGVIEGFLSKEVSYIVSSRREVKAESSGKSHRGCPSPSPSEVRVETS
Sbjct: 61 KNLQFLTGAIQQLGGVIEGFLSKEVSYIVSSRREVKAESSGKSHRGCPSPSPSEVRVETS 120
Query: 121 AMVDPKGSHPRPSRKPVDSVPLSRGKELLQKAIRNQGSISGGGSGGS 167
AMVDPKGSHPRPSRKPVDSVPLSRGKELLQKAIRNQ +S G G S
Sbjct: 121 AMVDPKGSHPRPSRKPVDSVPLSRGKELLQKAIRNQ--VSWGKMGQS 165
>gi|5729734 activator of S phase kinase [Homo sapiens]
Length = 674
Score = 181 bits (460), Expect = 1e-45
Identities = 112/308 (36%), Positives = 173/308 (56%), Gaps = 20/308 (6%)
Query: 47 PFSGKSFYLDLPAGKNLQFLTGAIQQLGGVIEGFLSKEVSYIVSSRREVK-AESSGKSHR 105
P GK FYLDLP+ + L I+ LGG +E FLSK++SY++S+++E K A++ G+
Sbjct: 45 PLWGKVFYLDLPSVTISEKLQKDIKDLGGRVEEFLSKDISYLISNKKEAKFAQTLGRI-- 102
Query: 106 GCPSPSPSEVRVETSAMVDPKGSHPRPSRKPVDSVPLSRGKELLQKAIRNQGSISGGGSG 165
SP PS T+ P SH S K D+V LSRGK L++KAI++ I
Sbjct: 103 ---SPVPSPESAYTAETTSPHPSHDGSSFKSPDTVCLSRGKLLVEKAIKDHDFIP----- 154
Query: 166 GSSSLLTNARSWGVRILHVDEMMMHVQQLSLASLCVKKQQPK-KPEGTCPAAESRTRKVA 224
S+S+L+NA SWGV+ILH+D++ +++Q +KK + G + ++ +
Sbjct: 155 -SNSILSNALSWGVKILHIDDIRYYIEQKKKELYLLKKSSTSVRDGGKRVGSGAQKTRTG 213
Query: 225 RLKAPFLKIEDESRKFRPFHHQFKSFPEISFLGPKDASPFEAPTTLGSMHHT----RESK 280
RLK PF+K+ED S+ +RPF+ Q + P I++ K SPF+ T R
Sbjct: 214 RLKKPFVKVEDMSQLYRPFYLQLTNMPFINYSIQKPCSPFDVDKPSSMQKQTQVKLRIQT 273
Query: 281 DGEPSPRSAAHTM--PRRKKGYCECCQEAFEELHVHLQSAQHRSFALEAHLYAEVDRIIA 338
DG+ ++ ++KKGYCECC + +E+L HL S QHR+FA +++ Y VD I++
Sbjct: 274 DGDKYGGTSIQLQLKEKKKKGYCECCLQKYEDLETHLLSEQHRNFA-QSNQYQVVDDIVS 332
Query: 339 QLSHSFAD 346
+L F +
Sbjct: 333 KLVFDFVE 340
>gi|115298682 HBxAg transactivated protein 2 [Homo sapiens]
Length = 2817
Score = 39.7 bits (91), Expect = 0.008
Identities = 41/167 (24%), Positives = 64/167 (38%), Gaps = 11/167 (6%)
Query: 338 AQLSHSFADIPFQAGLPRWSGSPASDCDPLCPETLHP--HQPSHPRAASPRIRKE---DS 392
A L + +P P PAS P+ T P P P +AS + +
Sbjct: 1768 APLPATLTPVPASTSAP----VPASTLAPVLASTSAPVPASPLAPVSASASVSASVPAST 1823
Query: 393 CQASVTQGRAAGQQRWTESLDGVMGPPASHTCVSATTLLPALPKGSREQGCLCPCPASFT 452
A++T A + + PAS T + A+ +P L P PA+ +
Sbjct: 1824 SAAAITSSSAPASAPAPTPILASVSTPASVT-ILASASIPILASALASTSAPTPAPAASS 1882
Query: 453 QSHLVTSLALLPGEWSPAEDMPLHPSQENSFAPADIPVKGPLLFPEA 499
+ V + +P +P +PL P+ ++ APA PV P P A
Sbjct: 1883 PAAPVITAPTIPAS-APTASVPLAPASASAPAPAPTPVSAPNPAPPA 1928
>gi|46409310 zinc finger protein 467 [Homo sapiens]
Length = 595
Score = 38.5 bits (88), Expect = 0.018
Identities = 50/186 (26%), Positives = 71/186 (38%), Gaps = 50/186 (26%)
Query: 205 QPKKPEGTCPAAESRTRKVARLKAPFLKIEDESRKFRPFHHQFKSFPEISFLGPKDASPF 264
Q +P GTCP E RKV K+EDE ++ + +P+ L P SPF
Sbjct: 78 QKAQPVGTCPGEEWMIRKV--------KVEDEDQE----AEEEVEWPQHLSLLP---SPF 122
Query: 265 EAPTTLGSMHHTRESKDGEPSPRSAA-----HTMPRRKKGYCECCQEAFEELHVHLQSAQ 319
AP LG + + + G P S MP + G EC + ++L + L
Sbjct: 123 PAP-DLGHLAAAYKLEPGAPGALSGLALSGWGPMPEKPYGCGECERRFRDQLTLRLHQRL 181
Query: 320 H------------RSFALEAHLYAEVDRIIAQLSHSFADIPFQAGLPRWSGSPASDCDPL 367
H RSF AH+ ++ Q SH + PF P S+CD
Sbjct: 182 HRGEGPCACPDCGRSFTQRAHM------LLHQRSHR-GERPF----------PCSECDKR 224
Query: 368 CPETLH 373
+ H
Sbjct: 225 FSKKAH 230
>gi|16418451 hypothetical protein LOC116328 [Homo sapiens]
Length = 427
Score = 35.0 bits (79), Expect = 0.20
Identities = 45/172 (26%), Positives = 70/172 (40%), Gaps = 32/172 (18%)
Query: 234 EDESRKFRPFHHQFKSFPEISFLGPKDASPFEAPTTLGSMHHTRESKDGEPSPRSAAH-- 291
E E + + F+S+ + L K P ++ + L + + S D + PRS H
Sbjct: 43 ESEKSESKGTRRDFRSYDKPWQLNAK--KPKKSKSDLAVSNISPPSPDSKSLPRSVEHPK 100
Query: 292 ----TMPRRKKGYCECCQEAFEELHVHLQSAQHRSFALEAHLYAEVDRIIAQLSHSFAD- 346
T P+ + F+EL+ LQ ++ ALE + R IA +
Sbjct: 101 WNWRTKPQSRD---------FDELNHILQESKKLGKALE-----NLSRSIAISDELDKET 146
Query: 347 IPFQAGLPR------WSGSPASDCDPLCPETLHPHQPSHPRAASPRIRKEDS 392
+ F + L R W G +D DPL E L QP PR+ + + EDS
Sbjct: 147 VTFNSSLLRPRVIGEWIGREENDADPLAAEML---QPPIPRSKNDQWESEDS 195
>gi|239741939 PREDICTED: hypothetical protein XP_002342358 [Homo
sapiens]
Length = 389
Score = 34.7 bits (78), Expect = 0.27
Identities = 61/219 (27%), Positives = 80/219 (36%), Gaps = 48/219 (21%)
Query: 357 SGSPA---SDCDPLCPETLHPHQPSHPRAASPRIRKEDSCQA-----SVTQGRAAGQ-QR 407
SGSPA S+C+ P L H P +A PR+ SC+A + G AG+
Sbjct: 115 SGSPAAPPSNCNISSPPGLQLHDPQTRTSAPPRV---SSCKALKLEHQLPAGSPAGRPSN 171
Query: 408 W--------------TESLDGVMGPPASH----TCVSATTLLP--ALPKGSREQGCLCPC 447
W TE++ H S TTL P LP GS
Sbjct: 172 WIISSPQGLQLHSPKTETVSSCKALKRQHQLPPRVSSCTTLKPEHQLPPGSP-----AAW 226
Query: 448 PASFT-QSHLVTSLALLPGEW--SPAEDMPLHPSQENSFAPADIPVKGPLLFPEARPWLM 504
P+S S V+S P W S + + LH Q + AP P P P +RP
Sbjct: 227 PSSCNISSPPVSSCTPQPSNWNISSPQGLQLHDPQTGTSAPPGSPALLP-GSPASRP--- 282
Query: 505 SARCWVRPFPFVTWGCLIPHDTTPLH--EEVSPCPCLRL 541
W+ FP + +P T VS C L+L
Sbjct: 283 --SNWIISFPALKLEHQLPSPQTGTSALPRVSSCRTLKL 319
>gi|151301098 zinc finger, DBF-type containing 2 [Homo sapiens]
Length = 2354
Score = 34.7 bits (78), Expect = 0.27
Identities = 13/33 (39%), Positives = 21/33 (63%)
Query: 295 RRKKGYCECCQEAFEELHVHLQSAQHRSFALEA 327
++++GYC C+ + L HL SAQHRS ++
Sbjct: 2 QKRQGYCSYCRVQYNNLEQHLFSAQHRSLTRQS 34
>gi|59806361 hypothetical protein LOC387104 [Homo sapiens]
Length = 947
Score = 34.3 bits (77), Expect = 0.35
Identities = 31/119 (26%), Positives = 44/119 (36%), Gaps = 21/119 (17%)
Query: 100 SGKSHRGCPSPSPSE------VRVETSAMVDPKGSHPRPSRKPVDSVPLSRGKELLQKAI 153
SG+ G P P P VR + +G+ P PS P +
Sbjct: 180 SGEREGGAPQPPPPRGWRGKGVRAQQRGGSGGEGASPSPSSSSAGKTPGTGS-------- 231
Query: 154 RNQGS-ISGGGSGGSSSLLTNARSWGVRILHVDEMMMHVQQLSLASLCVKKQQPKKPEG 211
RN GS ++GGGSGG S W L + + H+++ A+ Q K G
Sbjct: 232 RNSGSGVAGGGSGGGGSY------WKEGCLQSELIQFHLKKERAAAAAAAAQMHAKNGG 284
>gi|239735519 SET binding factor 1 [Homo sapiens]
Length = 1893
Score = 33.5 bits (75), Expect = 0.59
Identities = 27/85 (31%), Positives = 41/85 (48%), Gaps = 7/85 (8%)
Query: 104 HRGCPSPSPSEVRVETSAMVDPKGSHPRPSRKPVDSVPLSRGKELLQKA-IRNQGSISGG 162
HRG P P E + S ++P P + KP D + +S L+++A R+ +
Sbjct: 1080 HRGQPPPEDQEDEISVSEELEPSTLTPSSALKPSDRMTMS---SLVERACCRDYQRL--- 1133
Query: 163 GSGGSSSLLTNARSWGVRILHVDEM 187
G G SS L+ A+S RI V+ M
Sbjct: 1134 GLGTLSSSLSRAKSEPFRISPVNRM 1158
>gi|4502079 adenosine monophosphate deaminase 3 isoform 1A [Homo
sapiens]
Length = 776
Score = 33.1 bits (74), Expect = 0.77
Identities = 48/178 (26%), Positives = 68/178 (38%), Gaps = 22/178 (12%)
Query: 213 CPAA--ESRTRKVARLKAPFLKIEDESRK--FRPFHHQFKSF---PEISFLGPKDASPFE 265
CP E++ R++ + A +E RK F+ Q S P+ + GP ASP
Sbjct: 56 CPIGQKEAKERELQKELAEQKSVETAKRKKSFKMIRSQSLSLQMPPQQDWKGPPAASPAM 115
Query: 266 APTTLGSMHHTRESKDGEPSPRSAAHTMPRRKK-----GYCE-CCQEAFEELHVHLQSAQ 319
+PTT T P A + MP ++ YC E +E+ L A
Sbjct: 116 SPTTPVVTGAT-------SLPTPAPYAMPEFQRVTISGDYCAGITLEDYEQAAKSLAKAL 168
Query: 320 HRSFALEAHLYAEVDRIIAQ-LSHSFAD-IPFQAGLPRWSGSPASDCDPLCPETLHPH 375
Y RI +Q L H AD P + GLP + P DP C + P+
Sbjct: 169 MIREKYARLAYHRFPRITSQYLGHPRADTAPPEEGLPDFHPPPLPQEDPYCLDDAPPN 226
>gi|70906428 adenosine monophosphate deaminase 3 isoform 1C [Homo
sapiens]
Length = 774
Score = 33.1 bits (74), Expect = 0.77
Identities = 48/178 (26%), Positives = 68/178 (38%), Gaps = 22/178 (12%)
Query: 213 CPAA--ESRTRKVARLKAPFLKIEDESRK--FRPFHHQFKSF---PEISFLGPKDASPFE 265
CP E++ R++ + A +E RK F+ Q S P+ + GP ASP
Sbjct: 54 CPIGQKEAKERELQKELAEQKSVETAKRKKSFKMIRSQSLSLQMPPQQDWKGPPAASPAM 113
Query: 266 APTTLGSMHHTRESKDGEPSPRSAAHTMPRRKK-----GYCE-CCQEAFEELHVHLQSAQ 319
+PTT T P A + MP ++ YC E +E+ L A
Sbjct: 114 SPTTPVVTGAT-------SLPTPAPYAMPEFQRVTISGDYCAGITLEDYEQAAKSLAKAL 166
Query: 320 HRSFALEAHLYAEVDRIIAQ-LSHSFAD-IPFQAGLPRWSGSPASDCDPLCPETLHPH 375
Y RI +Q L H AD P + GLP + P DP C + P+
Sbjct: 167 MIREKYARLAYHRFPRITSQYLGHPRADTAPPEEGLPDFHPPPLPQEDPYCLDDAPPN 224
>gi|70906426 adenosine monophosphate deaminase 3 isoform 1B [Homo
sapiens]
Length = 767
Score = 33.1 bits (74), Expect = 0.77
Identities = 48/178 (26%), Positives = 68/178 (38%), Gaps = 22/178 (12%)
Query: 213 CPAA--ESRTRKVARLKAPFLKIEDESRK--FRPFHHQFKSF---PEISFLGPKDASPFE 265
CP E++ R++ + A +E RK F+ Q S P+ + GP ASP
Sbjct: 47 CPIGQKEAKERELQKELAEQKSVETAKRKKSFKMIRSQSLSLQMPPQQDWKGPPAASPAM 106
Query: 266 APTTLGSMHHTRESKDGEPSPRSAAHTMPRRKK-----GYCE-CCQEAFEELHVHLQSAQ 319
+PTT T P A + MP ++ YC E +E+ L A
Sbjct: 107 SPTTPVVTGAT-------SLPTPAPYAMPEFQRVTISGDYCAGITLEDYEQAAKSLAKAL 159
Query: 320 HRSFALEAHLYAEVDRIIAQ-LSHSFAD-IPFQAGLPRWSGSPASDCDPLCPETLHPH 375
Y RI +Q L H AD P + GLP + P DP C + P+
Sbjct: 160 MIREKYARLAYHRFPRITSQYLGHPRADTAPPEEGLPDFHPPPLPQEDPYCLDDAPPN 217
>gi|217035133 hypothetical protein LOC55765 isoform 2 [Homo sapiens]
Length = 578
Score = 33.1 bits (74), Expect = 0.77
Identities = 33/126 (26%), Positives = 44/126 (34%), Gaps = 28/126 (22%)
Query: 359 SPASDCDPLCPETLHPHQPSHPRAASPRIR-------KEDSCQASVTQGRAAGQQRWTES 411
SPA PL P+TL QP+ P A SP KE S + R + + W+ES
Sbjct: 203 SPAPPSRPLPPQTLEGLQPTGPEAGSPERAPVQNSPWKETSLDHPYEKPRKSSEP-WSES 261
Query: 412 LDGVMGPPASHTCVSATTLLPALPKGSREQGCLCPCPASFTQSHLVTSLALLPGEWSPAE 471
P + S L PA S+ V + +PG+W
Sbjct: 262 SSPATTPQDGPSASSLWLLEPA--------------------SYHVVPIRGVPGQWQGRT 301
Query: 472 DMPLHP 477
P P
Sbjct: 302 SAPATP 307
>gi|217035131 hypothetical protein LOC55765 isoform 1 [Homo sapiens]
Length = 663
Score = 33.1 bits (74), Expect = 0.77
Identities = 33/126 (26%), Positives = 44/126 (34%), Gaps = 28/126 (22%)
Query: 359 SPASDCDPLCPETLHPHQPSHPRAASPRIR-------KEDSCQASVTQGRAAGQQRWTES 411
SPA PL P+TL QP+ P A SP KE S + R + + W+ES
Sbjct: 288 SPAPPSRPLPPQTLEGLQPTGPEAGSPERAPVQNSPWKETSLDHPYEKPRKSSEP-WSES 346
Query: 412 LDGVMGPPASHTCVSATTLLPALPKGSREQGCLCPCPASFTQSHLVTSLALLPGEWSPAE 471
P + S L PA S+ V + +PG+W
Sbjct: 347 SSPATTPQDGPSASSLWLLEPA--------------------SYHVVPIRGVPGQWQGRT 386
Query: 472 DMPLHP 477
P P
Sbjct: 387 SAPATP 392
>gi|4758258 eukaryotic translation initiation factor 4E binding
protein 1 [Homo sapiens]
Length = 118
Score = 32.3 bits (72), Expect = 1.3
Identities = 25/82 (30%), Positives = 32/82 (39%), Gaps = 3/82 (3%)
Query: 396 SVTQGRAAGQQRWTESLDGVMGPPASHTCVSATTLLPALPKGSR---EQGCLCPCPASFT 452
S T RA R DGV PP ++ TL P G+R ++ L C S
Sbjct: 8 SQTPSRAIPATRRVVLGDGVQLPPGDYSTTPGGTLFSTTPGGTRIIYDRKFLMECRNSPV 67
Query: 453 QSHLVTSLALLPGEWSPAEDMP 474
L +PG SP+ D P
Sbjct: 68 TKTPPRDLPTIPGVTSPSSDEP 89
>gi|4505959 POU domain, class 2, transcription factor 2 [Homo
sapiens]
Length = 463
Score = 32.0 bits (71), Expect = 1.7
Identities = 36/127 (28%), Positives = 49/127 (38%), Gaps = 21/127 (16%)
Query: 360 PASDCDPLCPETLHPHQPSHPRAASPRIRKEDSCQASVTQGRAAGQQRWTESLDGVMGPP 419
P+ D P P P QP P+A Q +T + AG + L ++ P
Sbjct: 68 PSGDSAPAAPLPPQPAQPHLPQA-----------QLMLTGSQLAGDIQQLLQLQQLVLVP 116
Query: 420 ASHTCVSATTLLPALPKGSREQGCLCPCPASF-----TQSHLVTS--LALLPGEWSPAED 472
H A L LP+ + Q L P P F TQ L+TS A LP + +
Sbjct: 117 GHHLQPPAQFL---LPQAQQSQPGLLPTPNLFQLPQQTQGALLTSQPRAGLPTQPPKCLE 173
Query: 473 MPLHPSQ 479
P HP +
Sbjct: 174 PPSHPEE 180
>gi|73747881 zinc finger, ZZ type with EF hand domain 1 [Homo sapiens]
Length = 2961
Score = 32.0 bits (71), Expect = 1.7
Identities = 31/95 (32%), Positives = 36/95 (37%), Gaps = 6/95 (6%)
Query: 298 KGYCECCQEAFEELHVH-LQSAQHRSFALEAHLYAEVDRIIAQLSHSFADIP---FQAGL 353
K CE + A E H+ L Q S +E H A V A + P Q L
Sbjct: 1438 KESCEKLETADETSHLQPLNKRQRTSSVVEEHFQASVSPTEAAPPATGDQSPGLGTQPKL 1497
Query: 354 PRWSGSPASDCDPLCPETLHPHQPSHPRAASPRIR 388
P SG PA+D P E P PS P P R
Sbjct: 1498 PSSSGLPAADVSPATAE--EPLSPSTPTRRPPFTR 1530
>gi|162287219 prune homolog 2 [Homo sapiens]
Length = 3088
Score = 31.6 bits (70), Expect = 2.2
Identities = 17/52 (32%), Positives = 24/52 (46%), Gaps = 2/52 (3%)
Query: 89 VSSRREVKAESSGKSHRGCPSPSPSEVRVETSAMVDPKGSHP--RPSRKPVD 138
+ + ++K S SH+G P PS T V KG+ P P +PVD
Sbjct: 2171 IGYQADIKGSSQPASHKGSPEPSEINGDNSTGLQVSEKGASPDMAPILEPVD 2222
>gi|240255505 potassium channel, subfamily T, member 1 [Homo
sapiens]
Length = 1235
Score = 31.6 bits (70), Expect = 2.2
Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Query: 126 KGSHPRPSRKPVDSVPLSRGKELLQ-KAIRNQGSISGGGSGGSSSLLTNARSWGVR 180
+G H P+R PV S+ S G + + ++ + SGGG GGS L G R
Sbjct: 651 QGLHEGPARLPVHSIIASMGTVAMDLQGTEHRPTQSGGGGGGSKLALPTENGSGSR 706
>gi|7661990 mastermind-like 1 [Homo sapiens]
Length = 1016
Score = 31.6 bits (70), Expect = 2.2
Identities = 49/200 (24%), Positives = 80/200 (40%), Gaps = 23/200 (11%)
Query: 98 ESSGKSHRGCPSPSPSEVRVETSAMVDPKGSHPRPSRKPVDSVPLSRGKELLQKAIRNQG 157
+SSGK G S + R+ S++ H P +S PLS KEL Q+ + +
Sbjct: 174 QSSGKHSLGLDSLNKK--RLADSSL------HLNGGSNPSESFPLSLNKELKQEPVEDLP 225
Query: 158 SISGG--GSGGSSSLL----TNARSWGVRILHVDEMMMHVQQLSLASLCVKKQQPKK-PE 210
+ G GS S+L+ N + W I +E+ V + L + + KK PE
Sbjct: 226 CMITGTVGSISQSNLMPDLNLNEQEWKELI---EELNRSVPDEDMKDLFNEDFEEKKDPE 282
Query: 211 GTCPAAESRTRKVARLKAPFLKIEDESRKFRPFHHQFKSFPEISFLGPKDASPFEAPTTL 270
+ A ++ + +K F E + + S + +FLGP A +L
Sbjct: 283 SSGSATQTPLAQDINIKTEFSPAAFEQEQLGSPQVRAGSAGQ-TFLGPSSAPVSTDSPSL 341
Query: 271 GS----MHHTRESKDGEPSP 286
G H + + + PSP
Sbjct: 342 GGSQTLFHTSGQPRADNPSP 361
>gi|150418009 transforming, acidic coiled-coil containing protein 2
isoform a [Homo sapiens]
Length = 2948
Score = 31.6 bits (70), Expect = 2.2
Identities = 48/195 (24%), Positives = 75/195 (38%), Gaps = 22/195 (11%)
Query: 117 VETSAMVDPKGSHPRPS-------RKPVDSVPLSRGKELLQKAIRNQGSISGGGSGGSS- 168
V+T ++P+ S + RK DSVP+S K L +++ Q S G S +
Sbjct: 2046 VDTFQTLEPRASDAKNQEGKVNTRRKSTDSVPIS--KSTLSRSLSLQASDFDGASSSGNP 2103
Query: 169 ---SLLTNARSWGVRILHVDEMMMHVQQLSLASLCVKKQQPKKPEGTCPAAESRTRKVAR 225
+L +A S G + ++ SL KKQ KKP T P E++
Sbjct: 2104 EAVALAPDAYSTGSS--SASSTLKRTKKPRPPSL-KKKQTTKKPTETPPVKETQQEPDEE 2160
Query: 226 LKAP-----FLKIEDESRKFR-PFHHQFKSFPEISFLGPKDASPFEAPTTLGSMHHTRES 279
P + + ES K P + P +GPK A P ++ + G +
Sbjct: 2161 SLVPSGENLASETKTESAKTEGPSPALLEETPLEPAVGPKAACPLDSESAEGVVPPASGG 2220
Query: 280 KDGEPSPRSAAHTMP 294
+ SP T+P
Sbjct: 2221 GRVQNSPPVGRKTLP 2235
>gi|45827755 transforming, acidic coiled-coil containing protein 2
isoform b [Homo sapiens]
Length = 1094
Score = 31.6 bits (70), Expect = 2.2
Identities = 48/195 (24%), Positives = 75/195 (38%), Gaps = 22/195 (11%)
Query: 117 VETSAMVDPKGSHPRPS-------RKPVDSVPLSRGKELLQKAIRNQGSISGGGSGGSS- 168
V+T ++P+ S + RK DSVP+S K L +++ Q S G S +
Sbjct: 192 VDTFQTLEPRASDAKNQEGKVNTRRKSTDSVPIS--KSTLSRSLSLQASDFDGASSSGNP 249
Query: 169 ---SLLTNARSWGVRILHVDEMMMHVQQLSLASLCVKKQQPKKPEGTCPAAESRTRKVAR 225
+L +A S G + ++ SL KKQ KKP T P E++
Sbjct: 250 EAVALAPDAYSTGSS--SASSTLKRTKKPRPPSL-KKKQTTKKPTETPPVKETQQEPDEE 306
Query: 226 LKAP-----FLKIEDESRKFR-PFHHQFKSFPEISFLGPKDASPFEAPTTLGSMHHTRES 279
P + + ES K P + P +GPK A P ++ + G +
Sbjct: 307 SLVPSGENLASETKTESAKTEGPSPALLEETPLEPAVGPKAACPLDSESAEGVVPPASGG 366
Query: 280 KDGEPSPRSAAHTMP 294
+ SP T+P
Sbjct: 367 GRVQNSPPVGRKTLP 381
>gi|45827753 transforming, acidic coiled-coil containing protein 2
isoform c [Homo sapiens]
Length = 996
Score = 31.6 bits (70), Expect = 2.2
Identities = 48/195 (24%), Positives = 75/195 (38%), Gaps = 22/195 (11%)
Query: 117 VETSAMVDPKGSHPRPS-------RKPVDSVPLSRGKELLQKAIRNQGSISGGGSGGSS- 168
V+T ++P+ S + RK DSVP+S K L +++ Q S G S +
Sbjct: 124 VDTFQTLEPRASDAKNQEGKVNTRRKSTDSVPIS--KSTLSRSLSLQASDFDGASSSGNP 181
Query: 169 ---SLLTNARSWGVRILHVDEMMMHVQQLSLASLCVKKQQPKKPEGTCPAAESRTRKVAR 225
+L +A S G + ++ SL KKQ KKP T P E++
Sbjct: 182 EAVALAPDAYSTGSS--SASSTLKRTKKPRPPSL-KKKQTTKKPTETPPVKETQQEPDEE 238
Query: 226 LKAP-----FLKIEDESRKFR-PFHHQFKSFPEISFLGPKDASPFEAPTTLGSMHHTRES 279
P + + ES K P + P +GPK A P ++ + G +
Sbjct: 239 SLVPSGENLASETKTESAKTEGPSPALLEETPLEPAVGPKAACPLDSESAEGVVPPASGG 298
Query: 280 KDGEPSPRSAAHTMP 294
+ SP T+P
Sbjct: 299 GRVQNSPPVGRKTLP 313
>gi|11119414 transforming, acidic coiled-coil containing protein 2
isoform d [Homo sapiens]
Length = 1026
Score = 31.6 bits (70), Expect = 2.2
Identities = 48/195 (24%), Positives = 75/195 (38%), Gaps = 22/195 (11%)
Query: 117 VETSAMVDPKGSHPRPS-------RKPVDSVPLSRGKELLQKAIRNQGSISGGGSGGSS- 168
V+T ++P+ S + RK DSVP+S K L +++ Q S G S +
Sbjct: 124 VDTFQTLEPRASDAKNQEGKVNTRRKSTDSVPIS--KSTLSRSLSLQASDFDGASSSGNP 181
Query: 169 ---SLLTNARSWGVRILHVDEMMMHVQQLSLASLCVKKQQPKKPEGTCPAAESRTRKVAR 225
+L +A S G + ++ SL KKQ KKP T P E++
Sbjct: 182 EAVALAPDAYSTGSS--SASSTLKRTKKPRPPSL-KKKQTTKKPTETPPVKETQQEPDEE 238
Query: 226 LKAP-----FLKIEDESRKFR-PFHHQFKSFPEISFLGPKDASPFEAPTTLGSMHHTRES 279
P + + ES K P + P +GPK A P ++ + G +
Sbjct: 239 SLVPSGENLASETKTESAKTEGPSPALLEETPLEPAVGPKAACPLDSESAEGVVPPASGG 298
Query: 280 KDGEPSPRSAAHTMP 294
+ SP T+P
Sbjct: 299 GRVQNSPPVGRKTLP 313
>gi|189181720 proteoglycan 4 isoform B [Homo sapiens]
Length = 1363
Score = 31.2 bits (69), Expect = 2.9
Identities = 20/83 (24%), Positives = 39/83 (46%), Gaps = 4/83 (4%)
Query: 94 EVKAESSGKSHRGCPSPSPSEVRVETSAMVDPKGSHPRPSRKPVDSVPLSRGKELLQKAI 153
EV +S S + P PS + ++++ PK + + ++K ++S ++ + +
Sbjct: 65 EVHNPTSPPSSKKAPPPSGASQTIKSTTKRSPKPPNKKKTKKVIESEEITEEHSVSE--- 121
Query: 154 RNQGSISGGGSGGSSSLLTNARS 176
NQ S S S SSS + +S
Sbjct: 122 -NQESSSSSSSSSSSSTIRKIKS 143
>gi|67190163 proteoglycan 4 isoform A [Homo sapiens]
Length = 1404
Score = 31.2 bits (69), Expect = 2.9
Identities = 20/83 (24%), Positives = 39/83 (46%), Gaps = 4/83 (4%)
Query: 94 EVKAESSGKSHRGCPSPSPSEVRVETSAMVDPKGSHPRPSRKPVDSVPLSRGKELLQKAI 153
EV +S S + P PS + ++++ PK + + ++K ++S ++ + +
Sbjct: 106 EVHNPTSPPSSKKAPPPSGASQTIKSTTKRSPKPPNKKKTKKVIESEEITEEHSVSE--- 162
Query: 154 RNQGSISGGGSGGSSSLLTNARS 176
NQ S S S SSS + +S
Sbjct: 163 -NQESSSSSSSSSSSSTIRKIKS 184
>gi|239752994 PREDICTED: achaete-scute complex homolog 5
(Drosophila) [Homo sapiens]
Length = 313
Score = 31.2 bits (69), Expect = 2.9
Identities = 23/101 (22%), Positives = 36/101 (35%)
Query: 296 RKKGYCECCQEAFEELHVHLQSAQHRSFALEAHLYAEVDRIIAQLSHSFADIPFQAGLPR 355
R++ +C E + L HL A + R I L + P + P
Sbjct: 198 RERQRVKCVNEGYARLRGHLPGALAEKRLSKVETLRAAIRYIKYLQELLSSAPDGSTPPA 257
Query: 356 WSGSPASDCDPLCPETLHPHQPSHPRAASPRIRKEDSCQAS 396
G P + P P T P +P A +P +S ++S
Sbjct: 258 SRGLPGTGPCPAPPATPRPDRPGDGEARAPSSLVPESSESS 298
>gi|239747548 PREDICTED: achaete-scute complex homolog 5
(Drosophila) [Homo sapiens]
Length = 313
Score = 31.2 bits (69), Expect = 2.9
Identities = 23/101 (22%), Positives = 36/101 (35%)
Query: 296 RKKGYCECCQEAFEELHVHLQSAQHRSFALEAHLYAEVDRIIAQLSHSFADIPFQAGLPR 355
R++ +C E + L HL A + R I L + P + P
Sbjct: 198 RERQRVKCVNEGYARLRGHLPGALAEKRLSKVETLRAAIRYIKYLQELLSSAPDGSTPPA 257
Query: 356 WSGSPASDCDPLCPETLHPHQPSHPRAASPRIRKEDSCQAS 396
G P + P P T P +P A +P +S ++S
Sbjct: 258 SRGLPGTGPCPAPPATPRPDRPGDGEARAPSSLVPESSESS 298
>gi|239741422 PREDICTED: achaete-scute complex homolog 5 [Homo
sapiens]
Length = 313
Score = 31.2 bits (69), Expect = 2.9
Identities = 23/101 (22%), Positives = 36/101 (35%)
Query: 296 RKKGYCECCQEAFEELHVHLQSAQHRSFALEAHLYAEVDRIIAQLSHSFADIPFQAGLPR 355
R++ +C E + L HL A + R I L + P + P
Sbjct: 198 RERQRVKCVNEGYARLRGHLPGALAEKRLSKVETLRAAIRYIKYLQELLSSAPDGSTPPA 257
Query: 356 WSGSPASDCDPLCPETLHPHQPSHPRAASPRIRKEDSCQAS 396
G P + P P T P +P A +P +S ++S
Sbjct: 258 SRGLPGTGPCPAPPATPRPDRPGDGEARAPSSLVPESSESS 298
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.133 0.424
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 28,794,878
Number of Sequences: 37866
Number of extensions: 1563118
Number of successful extensions: 5429
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 63
Number of HSP's that attempted gapping in prelim test: 5375
Number of HSP's gapped (non-prelim): 114
length of query: 615
length of database: 18,247,518
effective HSP length: 108
effective length of query: 507
effective length of database: 14,157,990
effective search space: 7178100930
effective search space used: 7178100930
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.