Guide to the Human Genome
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Name: SQRDL Sequence: fasta or formatted (450aa) NCBI GI: 10864011
Description:

sulfide dehydrogenase like

Referenced in:

Xenobiotic Pathways

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.7         39           3
 C cysteine            1.1          5           1
 D aspartate           4.2         19           3
 E glutamate           5.3         24           1
 F phenylalanine       3.8         17           1
 G glycine             7.6         34           3
 H histidine           2.0          9           1
 I isoleucine          5.8         26           2
 K lysine              7.6         34           2
 L leucine             8.7         39           2
 M methionine          2.9         13           2
 N asparagine          4.0         18           1
 P proline             6.0         27           2
 Q glutamine           3.8         17           2
 R arginine            4.4         20           2
 S serine              5.6         25           3
 T threonine           6.0         27           1
 V valine              7.1         32           2
 W tryptophan          1.3          6           1
 Y tyrosine            4.2         19           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   sulfide dehydrogenase like 
PYROXD1               0.011   pyridine nucleotide-disulphide oxidoreductase domain...
TXNRD2                0.009   thioredoxin reductase 2 precursor 
TPR                   0.007   nuclear pore complex-associated protein TPR 
TTC7A                 0.007   tetratricopeptide repeat domain 7A 
FOXRED1               0.006   FAD-dependent oxidoreductase domain containing 1 [Hom...
FAM118A               0.006   hypothetical protein LOC55007 
FAM118A               0.006   hypothetical protein LOC55007 
GSR                   0.006   glutathione reductase 
AIFM2                 0.006   apoptosis-inducing factor (AIF)-like mitchondrion-as...
TET1                  0.005   CXXC finger 6 
SPAG5                 0.005   sperm associated antigen 5 
CUX1                  0.005   cut-like homeobox 1 isoform c 
CUX1                  0.005   cut-like homeobox 1 isoform b 
TACC1                 0.005   transforming, acidic coiled-coil containing protein...
TACC1                 0.005   transforming, acidic coiled-coil containing protein...
TACC1                 0.005   transforming, acidic coiled-coil containing protein...
GUCY1B3               0.005   guanylate cyclase 1, soluble, beta 3 
LOC347475             0.005   hypothetical protein LOC347475 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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