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Search of human proteins with 22035646
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|22035646 apolipoprotein L3 isoform 1 [Homo sapiens]
(402 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|22035646 apolipoprotein L3 isoform 1 [Homo sapiens] 785 0.0
gi|22035650 apolipoprotein L3 isoform 3 [Homo sapiens] 384 e-106
gi|22035648 apolipoprotein L3 isoform 3 [Homo sapiens] 384 e-106
gi|19923626 apolipoprotein L4 isoform 1 [Homo sapiens] 374 e-104
gi|22035657 apolipoprotein L4 isoform 2 precursor [Homo sapiens] 374 e-104
gi|13562090 apolipoprotein L2 [Homo sapiens] 317 2e-86
gi|22035653 apolipoprotein L2 [Homo sapiens] 317 2e-86
gi|211938442 apolipoprotein L1 isoform c precursor [Homo sapiens] 283 1e-76
gi|211938440 apolipoprotein L1 isoform a precursor [Homo sapiens] 283 1e-76
gi|21735616 apolipoprotein L1 isoform b precursor [Homo sapiens] 283 1e-76
gi|21735614 apolipoprotein L1 isoform a precursor [Homo sapiens] 283 1e-76
gi|13449281 apolipoprotein L6 [Homo sapiens] 167 1e-41
gi|13470094 apolipoprotein L5 [Homo sapiens] 135 7e-32
gi|194353995 apolipoprotein L domain containing 1 isoform 1 [Hom... 55 9e-08
gi|194353993 apolipoprotein L domain containing 1 isoform 2 [Hom... 55 9e-08
gi|91982772 mucin 17 [Homo sapiens] 33 0.35
gi|189217428 laminin alpha 3 subunit isoform 4 [Homo sapiens] 33 0.46
gi|189217425 laminin alpha 3 subunit isoform 3 [Homo sapiens] 33 0.46
gi|126723390 ankyrin repeat domain 24 [Homo sapiens] 33 0.46
gi|14149631 ring finger protein 112 [Homo sapiens] 33 0.60
gi|58761548 tau tubulin kinase 1 [Homo sapiens] 32 0.78
gi|156938343 talin 2 [Homo sapiens] 32 0.78
gi|223029410 talin 1 [Homo sapiens] 32 1.0
gi|169214154 PREDICTED: hypothetical protein [Homo sapiens] 32 1.0
gi|169213511 PREDICTED: hypothetical protein [Homo sapiens] 32 1.0
gi|87116683 proline/serine-rich coiled-coil 2 [Homo sapiens] 31 1.7
gi|24234688 heat shock 70kDa protein 9 precursor [Homo sapiens] 31 2.3
gi|155969697 keratin 6C [Homo sapiens] 31 2.3
gi|5031839 keratin 6A [Homo sapiens] 31 2.3
gi|10092601 eukaryotic translation initiation factor 4 gamma, 3 ... 31 2.3
>gi|22035646 apolipoprotein L3 isoform 1 [Homo sapiens]
Length = 402
Score = 785 bits (2026), Expect = 0.0
Identities = 402/402 (100%), Positives = 402/402 (100%)
Query: 1 MGLGQGWGWEASCFACLIRSCCQVVTFTFPFGFQGISQSLENVSGYYADARLEVGSTQLR 60
MGLGQGWGWEASCFACLIRSCCQVVTFTFPFGFQGISQSLENVSGYYADARLEVGSTQLR
Sbjct: 1 MGLGQGWGWEASCFACLIRSCCQVVTFTFPFGFQGISQSLENVSGYYADARLEVGSTQLR 60
Query: 61 TAGSCSHSFKRSFLEKKRFTEEATKYFRERVSPVHLQILLTNNEAWKRFVTAAELPRDEA 120
TAGSCSHSFKRSFLEKKRFTEEATKYFRERVSPVHLQILLTNNEAWKRFVTAAELPRDEA
Sbjct: 61 TAGSCSHSFKRSFLEKKRFTEEATKYFRERVSPVHLQILLTNNEAWKRFVTAAELPRDEA 120
Query: 121 DALYEALKKLRTYAAIEDEYVQQKDEQFREWFLKEFPQVKRKIQESIEKLRALANGIEEV 180
DALYEALKKLRTYAAIEDEYVQQKDEQFREWFLKEFPQVKRKIQESIEKLRALANGIEEV
Sbjct: 121 DALYEALKKLRTYAAIEDEYVQQKDEQFREWFLKEFPQVKRKIQESIEKLRALANGIEEV 180
Query: 181 HRGCTISNVVSSSTGAASGIMSLAGLVLAPFTAGTSLALTAAGVGLGAASAVTGITTSIV 240
HRGCTISNVVSSSTGAASGIMSLAGLVLAPFTAGTSLALTAAGVGLGAASAVTGITTSIV
Sbjct: 181 HRGCTISNVVSSSTGAASGIMSLAGLVLAPFTAGTSLALTAAGVGLGAASAVTGITTSIV 240
Query: 241 EHSYTSSAEAEASRLTATSIDRLKVFKEVMRDITPNLLSLLNNYYEATQTIGSEIRAIRQ 300
EHSYTSSAEAEASRLTATSIDRLKVFKEVMRDITPNLLSLLNNYYEATQTIGSEIRAIRQ
Sbjct: 241 EHSYTSSAEAEASRLTATSIDRLKVFKEVMRDITPNLLSLLNNYYEATQTIGSEIRAIRQ 300
Query: 301 ARARARLPVTTWRISAGSGGQAERTIAGTTRAVSRGARILSATTSGIFLALDVVNLVYES 360
ARARARLPVTTWRISAGSGGQAERTIAGTTRAVSRGARILSATTSGIFLALDVVNLVYES
Sbjct: 301 ARARARLPVTTWRISAGSGGQAERTIAGTTRAVSRGARILSATTSGIFLALDVVNLVYES 360
Query: 361 KHLHEGAKSASAEELRRQAQELEENLMELTQIYQRLNPCHTH 402
KHLHEGAKSASAEELRRQAQELEENLMELTQIYQRLNPCHTH
Sbjct: 361 KHLHEGAKSASAEELRRQAQELEENLMELTQIYQRLNPCHTH 402
>gi|22035650 apolipoprotein L3 isoform 3 [Homo sapiens]
Length = 202
Score = 384 bits (985), Expect = e-106
Identities = 202/202 (100%), Positives = 202/202 (100%)
Query: 201 MSLAGLVLAPFTAGTSLALTAAGVGLGAASAVTGITTSIVEHSYTSSAEAEASRLTATSI 260
MSLAGLVLAPFTAGTSLALTAAGVGLGAASAVTGITTSIVEHSYTSSAEAEASRLTATSI
Sbjct: 1 MSLAGLVLAPFTAGTSLALTAAGVGLGAASAVTGITTSIVEHSYTSSAEAEASRLTATSI 60
Query: 261 DRLKVFKEVMRDITPNLLSLLNNYYEATQTIGSEIRAIRQARARARLPVTTWRISAGSGG 320
DRLKVFKEVMRDITPNLLSLLNNYYEATQTIGSEIRAIRQARARARLPVTTWRISAGSGG
Sbjct: 61 DRLKVFKEVMRDITPNLLSLLNNYYEATQTIGSEIRAIRQARARARLPVTTWRISAGSGG 120
Query: 321 QAERTIAGTTRAVSRGARILSATTSGIFLALDVVNLVYESKHLHEGAKSASAEELRRQAQ 380
QAERTIAGTTRAVSRGARILSATTSGIFLALDVVNLVYESKHLHEGAKSASAEELRRQAQ
Sbjct: 121 QAERTIAGTTRAVSRGARILSATTSGIFLALDVVNLVYESKHLHEGAKSASAEELRRQAQ 180
Query: 381 ELEENLMELTQIYQRLNPCHTH 402
ELEENLMELTQIYQRLNPCHTH
Sbjct: 181 ELEENLMELTQIYQRLNPCHTH 202
>gi|22035648 apolipoprotein L3 isoform 3 [Homo sapiens]
Length = 202
Score = 384 bits (985), Expect = e-106
Identities = 202/202 (100%), Positives = 202/202 (100%)
Query: 201 MSLAGLVLAPFTAGTSLALTAAGVGLGAASAVTGITTSIVEHSYTSSAEAEASRLTATSI 260
MSLAGLVLAPFTAGTSLALTAAGVGLGAASAVTGITTSIVEHSYTSSAEAEASRLTATSI
Sbjct: 1 MSLAGLVLAPFTAGTSLALTAAGVGLGAASAVTGITTSIVEHSYTSSAEAEASRLTATSI 60
Query: 261 DRLKVFKEVMRDITPNLLSLLNNYYEATQTIGSEIRAIRQARARARLPVTTWRISAGSGG 320
DRLKVFKEVMRDITPNLLSLLNNYYEATQTIGSEIRAIRQARARARLPVTTWRISAGSGG
Sbjct: 61 DRLKVFKEVMRDITPNLLSLLNNYYEATQTIGSEIRAIRQARARARLPVTTWRISAGSGG 120
Query: 321 QAERTIAGTTRAVSRGARILSATTSGIFLALDVVNLVYESKHLHEGAKSASAEELRRQAQ 380
QAERTIAGTTRAVSRGARILSATTSGIFLALDVVNLVYESKHLHEGAKSASAEELRRQAQ
Sbjct: 121 QAERTIAGTTRAVSRGARILSATTSGIFLALDVVNLVYESKHLHEGAKSASAEELRRQAQ 180
Query: 381 ELEENLMELTQIYQRLNPCHTH 402
ELEENLMELTQIYQRLNPCHTH
Sbjct: 181 ELEENLMELTQIYQRLNPCHTH 202
>gi|19923626 apolipoprotein L4 isoform 1 [Homo sapiens]
Length = 348
Score = 374 bits (961), Expect = e-104
Identities = 195/324 (60%), Positives = 249/324 (76%), Gaps = 4/324 (1%)
Query: 73 FLEKKRFTEEATKYFRERVSPVHLQILLTNNEAWKRFVTAAELPRDEADALYEALKKLRT 132
F EKKRFTEE +YF+++VSPVHL+ILLT++EAWKRFV AELPR+EADALYEALK L
Sbjct: 26 FQEKKRFTEEVIEYFQKKVSPVHLKILLTSDEAWKRFVRVAELPREEADALYEALKNLTP 85
Query: 133 YAAIEDEYVQQKDEQFREWFLKEFPQVKRKIQESIEKLRALANGIEEVHRGCTISNVVSS 192
Y AIED+ +QQK++QFREWFLKEFPQ++ KIQESIE+LR +AN IE+VHRGC I+NVVS
Sbjct: 86 YVAIEDKDMQQKEQQFREWFLKEFPQIRWKIQESIERLRVIANEIEKVHRGCVIANVVSG 145
Query: 193 STGAASGIMSLAGLVLAPFTAGTSLALTAAGVGLGAASAVTGITTSIVEHSYTSSAEAEA 252
STG I+S+ G++LAPFTAG SL++TAAGVGLG ASA GI +SIVE++YT SAE A
Sbjct: 146 STG----ILSVIGVMLAPFTAGLSLSITAAGVGLGIASATAGIASSIVENTYTRSAELTA 201
Query: 253 SRLTATSIDRLKVFKEVMRDITPNLLSLLNNYYEATQTIGSEIRAIRQARARARLPVTTW 312
SRLTATS D+L+ ++++RDITPN+LS ++ EAT+ I +++ +R+++A P+ W
Sbjct: 202 SRLTATSTDQLEALRDILRDITPNVLSFALDFDEATKMIANDVHTLRRSKATVGRPLIAW 261
Query: 313 RISAGSGGQAERTIAGTTRAVSRGARILSATTSGIFLALDVVNLVYESKHLHEGAKSASA 372
R + + RT TR V + AR L TSG+ + LDVVNLV +S LH+GAKS SA
Sbjct: 262 RYVPINVVETLRTRGAPTRIVRKVARNLGKATSGVLVVLDVVNLVQDSLDLHKGAKSESA 321
Query: 373 EELRRQAQELEENLMELTQIYQRL 396
E LR+ AQELEENL ELT I+Q L
Sbjct: 322 ESLRQWAQELEENLNELTHIHQSL 345
>gi|22035657 apolipoprotein L4 isoform 2 precursor [Homo sapiens]
Length = 351
Score = 374 bits (961), Expect = e-104
Identities = 195/324 (60%), Positives = 249/324 (76%), Gaps = 4/324 (1%)
Query: 73 FLEKKRFTEEATKYFRERVSPVHLQILLTNNEAWKRFVTAAELPRDEADALYEALKKLRT 132
F EKKRFTEE +YF+++VSPVHL+ILLT++EAWKRFV AELPR+EADALYEALK L
Sbjct: 29 FQEKKRFTEEVIEYFQKKVSPVHLKILLTSDEAWKRFVRVAELPREEADALYEALKNLTP 88
Query: 133 YAAIEDEYVQQKDEQFREWFLKEFPQVKRKIQESIEKLRALANGIEEVHRGCTISNVVSS 192
Y AIED+ +QQK++QFREWFLKEFPQ++ KIQESIE+LR +AN IE+VHRGC I+NVVS
Sbjct: 89 YVAIEDKDMQQKEQQFREWFLKEFPQIRWKIQESIERLRVIANEIEKVHRGCVIANVVSG 148
Query: 193 STGAASGIMSLAGLVLAPFTAGTSLALTAAGVGLGAASAVTGITTSIVEHSYTSSAEAEA 252
STG I+S+ G++LAPFTAG SL++TAAGVGLG ASA GI +SIVE++YT SAE A
Sbjct: 149 STG----ILSVIGVMLAPFTAGLSLSITAAGVGLGIASATAGIASSIVENTYTRSAELTA 204
Query: 253 SRLTATSIDRLKVFKEVMRDITPNLLSLLNNYYEATQTIGSEIRAIRQARARARLPVTTW 312
SRLTATS D+L+ ++++RDITPN+LS ++ EAT+ I +++ +R+++A P+ W
Sbjct: 205 SRLTATSTDQLEALRDILRDITPNVLSFALDFDEATKMIANDVHTLRRSKATVGRPLIAW 264
Query: 313 RISAGSGGQAERTIAGTTRAVSRGARILSATTSGIFLALDVVNLVYESKHLHEGAKSASA 372
R + + RT TR V + AR L TSG+ + LDVVNLV +S LH+GAKS SA
Sbjct: 265 RYVPINVVETLRTRGAPTRIVRKVARNLGKATSGVLVVLDVVNLVQDSLDLHKGAKSESA 324
Query: 373 EELRRQAQELEENLMELTQIYQRL 396
E LR+ AQELEENL ELT I+Q L
Sbjct: 325 ESLRQWAQELEENLNELTHIHQSL 348
>gi|13562090 apolipoprotein L2 [Homo sapiens]
Length = 337
Score = 317 bits (811), Expect = 2e-86
Identities = 174/330 (52%), Positives = 227/330 (68%), Gaps = 6/330 (1%)
Query: 75 EKKRFTEEATKYFRERVSPVHLQILLTNNEAWKRFVTAAELPRDEADALYEALKKLRTYA 134
E F E+ KYF+++VS +L LLT++EAW FV AAELPRDEAD L +AL KL ++
Sbjct: 4 ESSIFIEDYLKYFQDQVSRENLLQLLTDDEAWNGFVAAAELPRDEADELRKALNKLASHM 63
Query: 135 AIEDEYVQQKDEQFREWFLKEFPQVKRKIQESIEKLRALANGIEEVHRGCTISNVVSSST 194
++D+ KD+Q R+WFLKEFP++KR++++ I KLRALA +E+VHRG TI+NVVS+S
Sbjct: 64 VMKDKNRHDKDQQHRQWFLKEFPRLKRELEDHIRKLRALAEEVEQVHRGTTIANVVSNSV 123
Query: 195 GAASGIMSLAGLVLAPFTAGTSLALTAAGVGLGAASAVTGITTSIVEHSYTSSAEAEASR 254
G SGI++L GL LAPFT G S L G+GLGAA+AV GIT S+VE A A+A
Sbjct: 124 GTTSGILTLLGLGLAPFTEGISFVLLDTGMGLGAAAAVAGITCSVVELVNKLRARAQARN 183
Query: 255 LTATSIDRLKVFKEVMRDITPNLLSLLNNYYEATQTIGSEIRAIRQARARARL------P 308
L + + KV KE + TPN+L+L++N+Y+ TQ IG IRAIR+ARA +L P
Sbjct: 184 LDQSGTNVAKVMKEFVGGNTPNVLTLVDNWYQVTQGIGRNIRAIRRARANPQLGAYAPPP 243
Query: 309 VTTWRISAGSGGQAERTIAGTTRAVSRGARILSATTSGIFLALDVVNLVYESKHLHEGAK 368
RISA G Q ER + G +A+SRG I+ A T GI L LDVV+L YESKHL EGAK
Sbjct: 244 HIIGRISAEGGEQVERVVEGPAQAMSRGTMIVGAATGGILLLLDVVSLAYESKHLLEGAK 303
Query: 369 SASAEELRRQAQELEENLMELTQIYQRLNP 398
S SAEEL+++AQELE L LT+I++ L P
Sbjct: 304 SESAEELKKRAQELEGKLNFLTKIHEMLQP 333
>gi|22035653 apolipoprotein L2 [Homo sapiens]
Length = 337
Score = 317 bits (811), Expect = 2e-86
Identities = 174/330 (52%), Positives = 227/330 (68%), Gaps = 6/330 (1%)
Query: 75 EKKRFTEEATKYFRERVSPVHLQILLTNNEAWKRFVTAAELPRDEADALYEALKKLRTYA 134
E F E+ KYF+++VS +L LLT++EAW FV AAELPRDEAD L +AL KL ++
Sbjct: 4 ESSIFIEDYLKYFQDQVSRENLLQLLTDDEAWNGFVAAAELPRDEADELRKALNKLASHM 63
Query: 135 AIEDEYVQQKDEQFREWFLKEFPQVKRKIQESIEKLRALANGIEEVHRGCTISNVVSSST 194
++D+ KD+Q R+WFLKEFP++KR++++ I KLRALA +E+VHRG TI+NVVS+S
Sbjct: 64 VMKDKNRHDKDQQHRQWFLKEFPRLKRELEDHIRKLRALAEEVEQVHRGTTIANVVSNSV 123
Query: 195 GAASGIMSLAGLVLAPFTAGTSLALTAAGVGLGAASAVTGITTSIVEHSYTSSAEAEASR 254
G SGI++L GL LAPFT G S L G+GLGAA+AV GIT S+VE A A+A
Sbjct: 124 GTTSGILTLLGLGLAPFTEGISFVLLDTGMGLGAAAAVAGITCSVVELVNKLRARAQARN 183
Query: 255 LTATSIDRLKVFKEVMRDITPNLLSLLNNYYEATQTIGSEIRAIRQARARARL------P 308
L + + KV KE + TPN+L+L++N+Y+ TQ IG IRAIR+ARA +L P
Sbjct: 184 LDQSGTNVAKVMKEFVGGNTPNVLTLVDNWYQVTQGIGRNIRAIRRARANPQLGAYAPPP 243
Query: 309 VTTWRISAGSGGQAERTIAGTTRAVSRGARILSATTSGIFLALDVVNLVYESKHLHEGAK 368
RISA G Q ER + G +A+SRG I+ A T GI L LDVV+L YESKHL EGAK
Sbjct: 244 HIIGRISAEGGEQVERVVEGPAQAMSRGTMIVGAATGGILLLLDVVSLAYESKHLLEGAK 303
Query: 369 SASAEELRRQAQELEENLMELTQIYQRLNP 398
S SAEEL+++AQELE L LT+I++ L P
Sbjct: 304 SESAEELKKRAQELEGKLNFLTKIHEMLQP 333
>gi|211938442 apolipoprotein L1 isoform c precursor [Homo sapiens]
Length = 380
Score = 283 bits (725), Expect = 1e-76
Identities = 157/330 (47%), Positives = 215/330 (65%), Gaps = 8/330 (2%)
Query: 75 EKKRFTEEATKYFRERVSPVHLQILLTNNEAWKRFVTAAELPRDEADALYEALKKLRTYA 134
E F E+A KYF+E+VS +L +LLT+NEAW FV AAELPR+EAD L +AL L
Sbjct: 45 ESSIFIEDAIKYFKEKVSTQNLLLLLTDNEAWNGFVAAAELPRNEADELRKALDNLARQM 104
Query: 135 AIEDEYVQQKDEQFREWFLKEFPQVKRKIQESIEKLRALANGIEEVHRGCTISNVVSSST 194
++D+ K +Q+R WFLKEFP++K +++++I +LRALA+G+++VH+G TI+NVVS S
Sbjct: 105 IMKDKNWHDKGQQYRNWFLKEFPRLKSELEDNIRRLRALADGVQKVHKGTTIANVVSGSL 164
Query: 195 GAASGIMSLAGLVLAPFTAGTSLALTAAGVGLGAASAVTGITTSIVEHSYTSSAEAEASR 254
+SGI++L G+ LAPFT G SL L G+ LG +A+TGIT+S +++ +A+A
Sbjct: 165 SISSGILTLVGMGLAPFTEGGSLVLLEPGMELGITAALTGITSSTMDYGKKWWTQAQAHD 224
Query: 255 LTATSIDRLKVFKEVMRDITPNLLSLLNNYYEATQTIGSEIRAIRQARAR--------AR 306
L S+D+LK +E + + N LSL N Y+ T+ IG +IRA+R+ARA A
Sbjct: 225 LVIKSLDKLKEVREFLGENISNFLSLAGNTYQLTRGIGKDIRALRRARANLQSVPHASAS 284
Query: 307 LPVTTWRISAGSGGQAERTIAGTTRAVSRGARILSATTSGIFLALDVVNLVYESKHLHEG 366
P T ISA SG Q ER + +SRG ++ FL LDVV LVYESKHLHEG
Sbjct: 285 RPRVTEPISAESGEQVERVNEPSILEMSRGVKLTDVAPVSFFLVLDVVYLVYESKHLHEG 344
Query: 367 AKSASAEELRRQAQELEENLMELTQIYQRL 396
AKS +AEEL++ AQELEE L L Y+ L
Sbjct: 345 AKSETAEELKKVAQELEEKLNILNNNYKIL 374
>gi|211938440 apolipoprotein L1 isoform a precursor [Homo sapiens]
Length = 398
Score = 283 bits (725), Expect = 1e-76
Identities = 157/330 (47%), Positives = 215/330 (65%), Gaps = 8/330 (2%)
Query: 75 EKKRFTEEATKYFRERVSPVHLQILLTNNEAWKRFVTAAELPRDEADALYEALKKLRTYA 134
E F E+A KYF+E+VS +L +LLT+NEAW FV AAELPR+EAD L +AL L
Sbjct: 63 ESSIFIEDAIKYFKEKVSTQNLLLLLTDNEAWNGFVAAAELPRNEADELRKALDNLARQM 122
Query: 135 AIEDEYVQQKDEQFREWFLKEFPQVKRKIQESIEKLRALANGIEEVHRGCTISNVVSSST 194
++D+ K +Q+R WFLKEFP++K +++++I +LRALA+G+++VH+G TI+NVVS S
Sbjct: 123 IMKDKNWHDKGQQYRNWFLKEFPRLKSELEDNIRRLRALADGVQKVHKGTTIANVVSGSL 182
Query: 195 GAASGIMSLAGLVLAPFTAGTSLALTAAGVGLGAASAVTGITTSIVEHSYTSSAEAEASR 254
+SGI++L G+ LAPFT G SL L G+ LG +A+TGIT+S +++ +A+A
Sbjct: 183 SISSGILTLVGMGLAPFTEGGSLVLLEPGMELGITAALTGITSSTMDYGKKWWTQAQAHD 242
Query: 255 LTATSIDRLKVFKEVMRDITPNLLSLLNNYYEATQTIGSEIRAIRQARAR--------AR 306
L S+D+LK +E + + N LSL N Y+ T+ IG +IRA+R+ARA A
Sbjct: 243 LVIKSLDKLKEVREFLGENISNFLSLAGNTYQLTRGIGKDIRALRRARANLQSVPHASAS 302
Query: 307 LPVTTWRISAGSGGQAERTIAGTTRAVSRGARILSATTSGIFLALDVVNLVYESKHLHEG 366
P T ISA SG Q ER + +SRG ++ FL LDVV LVYESKHLHEG
Sbjct: 303 RPRVTEPISAESGEQVERVNEPSILEMSRGVKLTDVAPVSFFLVLDVVYLVYESKHLHEG 362
Query: 367 AKSASAEELRRQAQELEENLMELTQIYQRL 396
AKS +AEEL++ AQELEE L L Y+ L
Sbjct: 363 AKSETAEELKKVAQELEEKLNILNNNYKIL 392
>gi|21735616 apolipoprotein L1 isoform b precursor [Homo sapiens]
Length = 414
Score = 283 bits (725), Expect = 1e-76
Identities = 157/330 (47%), Positives = 215/330 (65%), Gaps = 8/330 (2%)
Query: 75 EKKRFTEEATKYFRERVSPVHLQILLTNNEAWKRFVTAAELPRDEADALYEALKKLRTYA 134
E F E+A KYF+E+VS +L +LLT+NEAW FV AAELPR+EAD L +AL L
Sbjct: 79 ESSIFIEDAIKYFKEKVSTQNLLLLLTDNEAWNGFVAAAELPRNEADELRKALDNLARQM 138
Query: 135 AIEDEYVQQKDEQFREWFLKEFPQVKRKIQESIEKLRALANGIEEVHRGCTISNVVSSST 194
++D+ K +Q+R WFLKEFP++K +++++I +LRALA+G+++VH+G TI+NVVS S
Sbjct: 139 IMKDKNWHDKGQQYRNWFLKEFPRLKSELEDNIRRLRALADGVQKVHKGTTIANVVSGSL 198
Query: 195 GAASGIMSLAGLVLAPFTAGTSLALTAAGVGLGAASAVTGITTSIVEHSYTSSAEAEASR 254
+SGI++L G+ LAPFT G SL L G+ LG +A+TGIT+S +++ +A+A
Sbjct: 199 SISSGILTLVGMGLAPFTEGGSLVLLEPGMELGITAALTGITSSTMDYGKKWWTQAQAHD 258
Query: 255 LTATSIDRLKVFKEVMRDITPNLLSLLNNYYEATQTIGSEIRAIRQARAR--------AR 306
L S+D+LK +E + + N LSL N Y+ T+ IG +IRA+R+ARA A
Sbjct: 259 LVIKSLDKLKEVREFLGENISNFLSLAGNTYQLTRGIGKDIRALRRARANLQSVPHASAS 318
Query: 307 LPVTTWRISAGSGGQAERTIAGTTRAVSRGARILSATTSGIFLALDVVNLVYESKHLHEG 366
P T ISA SG Q ER + +SRG ++ FL LDVV LVYESKHLHEG
Sbjct: 319 RPRVTEPISAESGEQVERVNEPSILEMSRGVKLTDVAPVSFFLVLDVVYLVYESKHLHEG 378
Query: 367 AKSASAEELRRQAQELEENLMELTQIYQRL 396
AKS +AEEL++ AQELEE L L Y+ L
Sbjct: 379 AKSETAEELKKVAQELEEKLNILNNNYKIL 408
>gi|21735614 apolipoprotein L1 isoform a precursor [Homo sapiens]
Length = 398
Score = 283 bits (725), Expect = 1e-76
Identities = 157/330 (47%), Positives = 215/330 (65%), Gaps = 8/330 (2%)
Query: 75 EKKRFTEEATKYFRERVSPVHLQILLTNNEAWKRFVTAAELPRDEADALYEALKKLRTYA 134
E F E+A KYF+E+VS +L +LLT+NEAW FV AAELPR+EAD L +AL L
Sbjct: 63 ESSIFIEDAIKYFKEKVSTQNLLLLLTDNEAWNGFVAAAELPRNEADELRKALDNLARQM 122
Query: 135 AIEDEYVQQKDEQFREWFLKEFPQVKRKIQESIEKLRALANGIEEVHRGCTISNVVSSST 194
++D+ K +Q+R WFLKEFP++K +++++I +LRALA+G+++VH+G TI+NVVS S
Sbjct: 123 IMKDKNWHDKGQQYRNWFLKEFPRLKSELEDNIRRLRALADGVQKVHKGTTIANVVSGSL 182
Query: 195 GAASGIMSLAGLVLAPFTAGTSLALTAAGVGLGAASAVTGITTSIVEHSYTSSAEAEASR 254
+SGI++L G+ LAPFT G SL L G+ LG +A+TGIT+S +++ +A+A
Sbjct: 183 SISSGILTLVGMGLAPFTEGGSLVLLEPGMELGITAALTGITSSTMDYGKKWWTQAQAHD 242
Query: 255 LTATSIDRLKVFKEVMRDITPNLLSLLNNYYEATQTIGSEIRAIRQARAR--------AR 306
L S+D+LK +E + + N LSL N Y+ T+ IG +IRA+R+ARA A
Sbjct: 243 LVIKSLDKLKEVREFLGENISNFLSLAGNTYQLTRGIGKDIRALRRARANLQSVPHASAS 302
Query: 307 LPVTTWRISAGSGGQAERTIAGTTRAVSRGARILSATTSGIFLALDVVNLVYESKHLHEG 366
P T ISA SG Q ER + +SRG ++ FL LDVV LVYESKHLHEG
Sbjct: 303 RPRVTEPISAESGEQVERVNEPSILEMSRGVKLTDVAPVSFFLVLDVVYLVYESKHLHEG 362
Query: 367 AKSASAEELRRQAQELEENLMELTQIYQRL 396
AKS +AEEL++ AQELEE L L Y+ L
Sbjct: 363 AKSETAEELKKVAQELEEKLNILNNNYKIL 392
>gi|13449281 apolipoprotein L6 [Homo sapiens]
Length = 343
Score = 167 bits (424), Expect = 1e-41
Identities = 111/302 (36%), Positives = 160/302 (52%), Gaps = 18/302 (5%)
Query: 102 NNEAWKRFVTAAELPRDEADALYEALKKLRTYAAIEDEYVQQKDEQFREW-FLKEFPQVK 160
+N+A + L RDE DA ED +Q D E FL+EFP++K
Sbjct: 2 DNQAERESEAGVGLQRDEDDA-----------PLCEDVELQDGDLSPEEKIFLREFPRLK 50
Query: 161 RKIQESIEKLRALANGIEEVHRGCTISNVVSSSTGAASGIMSLAGLVLAPFTAGTSLALT 220
++ +I+KLRALA+ I++ H+ T +N+V++ST SG+MSL GL LAP T G SL L+
Sbjct: 51 EDLKGNIDKLRALADDIDKTHKKFTKANMVATSTAVISGVMSLLGLALAPATGGGSLLLS 110
Query: 221 AAGVGLGAASAVTGITTSIVEHSYTSSAEAEASRLTATSIDRLKVFKEVMRDITPNLLSL 280
AG GL A+ VT I + +E S A+A A + T + +E D +
Sbjct: 111 TAGQGLATAAGVTSIVSGTLERSKNKEAQARAEDILPTYDQEDREDEEEKADYVTAAGKI 170
Query: 281 LNNYYEATQTIGSEIRAIRQARARARLP------VTTWRISAGSGGQAERTIAGTTRAVS 334
+ N + +RA + RA RL +TT ++S+ S Q ++ AGTT A++
Sbjct: 171 IYNLRNTLKYAKKNVRAFWKLRANPRLANATKRLLTTGQVSSRSRVQVQKAFAGTTLAMT 230
Query: 335 RGARILSATTSGIFLALDVVNLVYESKHLHEGAKSASAEELRRQAQELEENLMELTQIYQ 394
+ AR+L S L D+ L E KHL EGA++ AEELR +A ELE L ELTQ+Y+
Sbjct: 231 KNARVLGGVMSAFSLGYDLATLSKEWKHLKEGARTKFAEELRAKALELERKLTELTQLYK 290
Query: 395 RL 396
L
Sbjct: 291 SL 292
>gi|13470094 apolipoprotein L5 [Homo sapiens]
Length = 433
Score = 135 bits (340), Expect = 7e-32
Identities = 87/251 (34%), Positives = 143/251 (56%), Gaps = 8/251 (3%)
Query: 152 FLKEFPQVKRKIQESIEKLRALANGIEEVHRGCTISNVVSSSTGAASGIMSLAGLVLAPF 211
FL FP K +++++I++L LA+ ++ H T +++V+SS+GA SG+M++ GL LAP
Sbjct: 102 FLSYFPLHKFELEQNIKELNTLADQVDTTHELLTKTSLVASSSGAVSGVMNILGLALAPV 161
Query: 212 TAGTSLALTAAGVGLGAASAVTGITTSIVEHSYTSSAEAEASRLTATSIDRLKVFKEVMR 271
TAG SL L+A G GLGAA+A+T I T+++E+ S+A +ASRL + + F +
Sbjct: 162 TAGGSLMLSATGTGLGAAAAITNIVTNVLENRSNSAARDKASRLGPLTTSH-EAFGGINW 220
Query: 272 DITPNLLSLLNNYYEATQTIGSEIRAIRQAR------ARARLPVTTWRISAGSGGQAERT 325
+N +A Q I ++ A + A+ A + V I + +R
Sbjct: 221 SEIEAAGFCVNKCVKAIQGI-KDLHAYQMAKSNSGFMAMVKNFVAKRHIPFWTARGVQRA 279
Query: 326 IAGTTRAVSRGARILSATTSGIFLALDVVNLVYESKHLHEGAKSASAEELRRQAQELEEN 385
GTT A++ GA ++ A +G L D+ + + KHL +GA++ +AEELR A++LE+
Sbjct: 280 FEGTTLAMTNGAWVMGAAGAGFLLMKDMSSFLQSWKHLEDGARTETAEELRALAKKLEQE 339
Query: 386 LMELTQIYQRL 396
L LTQ ++ L
Sbjct: 340 LDRLTQHHRHL 350
>gi|194353995 apolipoprotein L domain containing 1 isoform 1 [Homo
sapiens]
Length = 279
Score = 55.5 bits (132), Expect = 9e-08
Identities = 29/103 (28%), Positives = 52/103 (50%)
Query: 162 KIQESIEKLRALANGIEEVHRGCTISNVVSSSTGAASGIMSLAGLVLAPFTAGTSLALTA 221
++ + +LR +A +E + R ++NV SS A + ++ GL L+P T GTSL ++A
Sbjct: 61 RLHGQVLRLREVARRLERLRRRSLVANVAGSSLSATGALAAIVGLSLSPVTLGTSLLVSA 120
Query: 222 AGVGLGAASAVTGITTSIVEHSYTSSAEAEASRLTATSIDRLK 264
G+G+ A IT+ + S + AT D+++
Sbjct: 121 VGLGVATAGGAVTITSDLSLIFCNSRELRRVQEIAATCQDQMR 163
>gi|194353993 apolipoprotein L domain containing 1 isoform 2 [Homo
sapiens]
Length = 248
Score = 55.5 bits (132), Expect = 9e-08
Identities = 29/103 (28%), Positives = 52/103 (50%)
Query: 162 KIQESIEKLRALANGIEEVHRGCTISNVVSSSTGAASGIMSLAGLVLAPFTAGTSLALTA 221
++ + +LR +A +E + R ++NV SS A + ++ GL L+P T GTSL ++A
Sbjct: 30 RLHGQVLRLREVARRLERLRRRSLVANVAGSSLSATGALAAIVGLSLSPVTLGTSLLVSA 89
Query: 222 AGVGLGAASAVTGITTSIVEHSYTSSAEAEASRLTATSIDRLK 264
G+G+ A IT+ + S + AT D+++
Sbjct: 90 VGLGVATAGGAVTITSDLSLIFCNSRELRRVQEIAATCQDQMR 132
>gi|91982772 mucin 17 [Homo sapiens]
Length = 4493
Score = 33.5 bits (75), Expect = 0.35
Identities = 41/156 (26%), Positives = 64/156 (41%), Gaps = 8/156 (5%)
Query: 187 SNVVSSSTGAASGIMSLAGLVLAPFTAGTSLALTAAGVGLGAASAVTGITTSIVEHSYTS 246
S VSSS A G TA TS+ ++ V + ++ T ++ T+
Sbjct: 1842 STAVSSSPTPAEGTSIATSTPSEGSTALTSIPVSTTTVASSETNTLS-TTPAVTSTPVTT 1900
Query: 247 SAEAEASRLTATSIDRLKVFKEVMRDITPNLLSLLNNYYEATQTIGSEIRAIRQARARAR 306
A+ +S TA D + R+ P L S+ T SEI + A R
Sbjct: 1901 YAQVSSSPTTA---DGSSMPTSTPREGRPPLTSIP---VSTTTVASSEINTLSTTLADTR 1954
Query: 307 LPVTTWRISAGSGGQAERTIAGTTRAVSRGARILSA 342
PVTT+ ++ S A+ T + T A S G+ L++
Sbjct: 1955 TPVTTYSQASSSPTTADGT-SMPTPAYSEGSTPLTS 1989
Score = 30.4 bits (67), Expect = 3.0
Identities = 37/158 (23%), Positives = 62/158 (39%), Gaps = 9/158 (5%)
Query: 189 VVSSSTGAASGIMSLAGLVLAPFTAGTSLALTAAGVGLGAASAVTGITT-SIVEHSYTSS 247
V+SS S + T TS TA G + ++ G+T + S+T
Sbjct: 1761 VLSSEASTLSATPIDTSTPVTTSTEATSSPTTAEGTSIPTSTLSEGMTPLTSTPVSHTLV 1820
Query: 248 AEAEASRLTATSIDRLKVFKEVMRDITPNLLSLLNNYYEATQTIGSEIRAIRQARARARL 307
A +EAS L+ T +D +T +S E T S + A +
Sbjct: 1821 ANSEASTLSTTPVDSNSPV------VTSTAVSSSPTPAEGTSIATS--TPSEGSTALTSI 1872
Query: 308 PVTTWRISAGSGGQAERTIAGTTRAVSRGARILSATTS 345
PV+T +++ T A T+ V+ A++ S+ T+
Sbjct: 1873 PVSTTTVASSETNTLSTTPAVTSTPVTTYAQVSSSPTT 1910
Score = 30.0 bits (66), Expect = 3.9
Identities = 36/158 (22%), Positives = 62/158 (39%), Gaps = 9/158 (5%)
Query: 189 VVSSSTGAASGIMSLAGLVLAPFTAGTSLALTAAGVGLGAASAVTGITT-SIVEHSYTSS 247
VVSS S + T TS TA G + ++ G T + S+T
Sbjct: 936 VVSSEARTLSATPVDTSTPVTTSTEATSSPTTAEGTSIPTSTPSEGTTPLTSTPVSHTLV 995
Query: 248 AEAEASRLTATSIDRLKVFKEVMRDITPNLLSLLNNYYEATQTIGSEIRAIRQARARARL 307
A +EAS L+ T +D +P + + +T + GS R+
Sbjct: 996 ANSEASTLSTTPVDSNTPLTTSTEASSPPPTAEGTSMPTSTPSEGS--------TPLTRM 1047
Query: 308 PVTTWRISAGSGGQAERTIAGTTRAVSRGARILSATTS 345
PV+T +++ T A T+ V+ ++ S++T+
Sbjct: 1048 PVSTTMVASSETSTLSTTPADTSTPVTTYSQASSSSTT 1085
>gi|189217428 laminin alpha 3 subunit isoform 4 [Homo sapiens]
Length = 1668
Score = 33.1 bits (74), Expect = 0.46
Identities = 24/134 (17%), Positives = 53/134 (39%), Gaps = 4/134 (2%)
Query: 256 TATSIDRLKVFKEVMRDITPNLLSLLNNYYEATQTIGSEIRAIRQARARARLPVTTWRIS 315
+A +++++ + +D+ LL NY A GS+I + + T +
Sbjct: 244 SAGLLEQMRHMETQAKDLRNQLL----NYRSAISNHGSKIEGLERELTDLNQEFETLQEK 299
Query: 316 AGSGGQAERTIAGTTRAVSRGARILSATTSGIFLALDVVNLVYESKHLHEGAKSASAEEL 375
A + +T+ ++ A+ L + + ++N + + H+G + A +
Sbjct: 300 AQVNSRKAQTLNNNVNRATQSAKELDVKIKNVIRNVHMLNRIRTWQKTHQGENNGLANSI 359
Query: 376 RRQAQELEENLMEL 389
R E E L +L
Sbjct: 360 RDSLNEYEAKLSDL 373
>gi|189217425 laminin alpha 3 subunit isoform 3 [Homo sapiens]
Length = 3277
Score = 33.1 bits (74), Expect = 0.46
Identities = 24/134 (17%), Positives = 53/134 (39%), Gaps = 4/134 (2%)
Query: 256 TATSIDRLKVFKEVMRDITPNLLSLLNNYYEATQTIGSEIRAIRQARARARLPVTTWRIS 315
+A +++++ + +D+ LL NY A GS+I + + T +
Sbjct: 1853 SAGLLEQMRHMETQAKDLRNQLL----NYRSAISNHGSKIEGLERELTDLNQEFETLQEK 1908
Query: 316 AGSGGQAERTIAGTTRAVSRGARILSATTSGIFLALDVVNLVYESKHLHEGAKSASAEEL 375
A + +T+ ++ A+ L + + ++N + + H+G + A +
Sbjct: 1909 AQVNSRKAQTLNNNVNRATQSAKELDVKIKNVIRNVHMLNRIRTWQKTHQGENNGLANSI 1968
Query: 376 RRQAQELEENLMEL 389
R E E L +L
Sbjct: 1969 RDSLNEYEAKLSDL 1982
>gi|126723390 ankyrin repeat domain 24 [Homo sapiens]
Length = 1146
Score = 33.1 bits (74), Expect = 0.46
Identities = 62/253 (24%), Positives = 103/253 (40%), Gaps = 28/253 (11%)
Query: 155 EFPQVKRKIQESIEKLRALANGIEEVHRGCTIS-NVVSSSTGAASGI--MSLAGLVLAPF 211
EF Q++R+ E+++ LR G + V+ +T +G M L G V AP
Sbjct: 495 EFDQLRRQHAEALQALRQQETREVPREEGAACGESEVAGATATKNGPTHMELNGSV-APE 553
Query: 212 T---AGTSLALTAAGVGLGAASAVTGITTSIVEHSYTSSAEAEASRLTATSIDRLKVFKE 268
T ++ AAG A + T + + AEA +++T T +V +
Sbjct: 554 TKVNGAETIDEEAAGDETMEARTMEAEATG----AEATGAEATGAKVTETKPTGAEVREM 609
Query: 269 VMRDITPNLLSLLNNYYEA-TQTIGSEIRAIRQARARAR-LPVTTWRISAGSGGQAERTI 326
+ N+ + T+T G E + + +A + + + AG QAE +
Sbjct: 610 ETTEEEANMETKPTGAQATDTETTGVEAMGVEATKTKAEEAEMQAYGVGAG---QAEPPV 666
Query: 327 AGTTRAVSRGARILSATTSGIFLALDVVNLVYES--------KHLHEGAKSASAE---EL 375
GTT + G+R ++G+ A V N E+ LH GA AS + EL
Sbjct: 667 TGTTNMEATGSRATGMESTGV-SATGVENPGVEATVPGISAGPILHPGAAEASEKLQVEL 725
Query: 376 RRQAQELEENLME 388
+ + LEE L +
Sbjct: 726 ETRIRGLEEALRQ 738
>gi|14149631 ring finger protein 112 [Homo sapiens]
Length = 632
Score = 32.7 bits (73), Expect = 0.60
Identities = 40/146 (27%), Positives = 58/146 (39%), Gaps = 31/146 (21%)
Query: 118 DEADALYEALKKLRTYAAIEDEYVQQKDEQFREWF--LKEFPQVKRKIQ----------- 164
DE A L+K+ +EYV+Q+D + F L+ P R +
Sbjct: 450 DEMAAQLHDLRKVEAAKREFEEYVRQQDVATKRIFSALRVLPDTMRNLLSTQKDAILARH 509
Query: 165 -------------ESIE-KLRALANGIEEVH--RGCTISNVVSSSTGAASGIMSLAGLVL 208
E++E +L+A A + + R C V + GA G+M LAG V+
Sbjct: 510 GVALLCKGRDQTLEALEAELQATAKAFMDSYTMRFCGHLAAVGGAVGA--GLMGLAGGVV 567
Query: 209 APFTAGTSLALTAAGVGLGAASAVTG 234
A +LA A V GAA TG
Sbjct: 568 GAGMAAAALAAEAGMVAAGAAVGATG 593
>gi|58761548 tau tubulin kinase 1 [Homo sapiens]
Length = 1321
Score = 32.3 bits (72), Expect = 0.78
Identities = 51/202 (25%), Positives = 77/202 (38%), Gaps = 37/202 (18%)
Query: 200 IMSLAGLVLAP--FTAGTSLALTAAGVG----------LGAASAVTGITTSIVEHSYTSS 247
+MS G L F+AG L L A G L A++G+ + +E S S
Sbjct: 941 VMSSGGQALRSEEFSAGGELGLELASDGGAVEEGARAPLENGLALSGLNGAEIEGSALSG 1000
Query: 248 AEAEA-SRLTATSIDRLKVFKEVMRDITPNLLSLLNNYYEATQTIGSEIRAIRQARARAR 306
A E S + S+ + ++P L E TI A+ +R R+R
Sbjct: 1001 APRETPSEMATNSLPNGPALADGPAPVSP-----LEPSPEKVATISPRRHAMPGSRPRSR 1055
Query: 307 LPVTTWRISAGSGGQAERTIAGTTRAVSRGARILSATTSGIFLALDVVNLVYESK----- 361
+PV GS +G+ A R ++ D+ LV E +
Sbjct: 1056 IPVLLSEEDTGS------EPSGSLSAKERWSKRARPQQ-------DLARLVMEKRQGRLL 1102
Query: 362 -HLHEGAKSASAEELRRQAQEL 382
L GA S+S+EE RR ++ L
Sbjct: 1103 LRLASGASSSSSEEQRRASETL 1124
>gi|156938343 talin 2 [Homo sapiens]
Length = 2542
Score = 32.3 bits (72), Expect = 0.78
Identities = 41/190 (21%), Positives = 76/190 (40%), Gaps = 16/190 (8%)
Query: 208 LAPFTAGTSLALTAAGVGLGAASAVTGITTSIVEHSYTSSAEAEASRLTATSIDRLKVFK 267
+A T+ + +AA L A V I + + S A+R+ A +
Sbjct: 2353 IAAATSALVKSASAAQRELVAQGKVGSIPANAADDGQWSQGLISAARMVAAA-------- 2404
Query: 268 EVMRDITPNLLSLLNNYYEATQTIGSEIRAIRQARARARLPVTTWRISAGSGGQAERTIA 327
T +L N + + I + +Q A + ++ A +A R +
Sbjct: 2405 ------TSSLCEAANASVQGHASEEKLISSAKQVAASTAQLLVACKVKADQDSEAMRRLQ 2458
Query: 328 GTTRAVSRGA-RILSATTSGIFLALDVVNLVYESKHLHEGAKSASA-EELRRQAQELEEN 385
AV R + ++ A F D ++V ++K + A+ +A EE+ ++ +ELEE
Sbjct: 2459 AAGNAVKRASDNLVRAAQKAAFGKADDDDVVVKTKFVGGIAQIIAAQEEMLKKERELEEA 2518
Query: 386 LMELTQIYQR 395
+L QI Q+
Sbjct: 2519 RKKLAQIRQQ 2528
>gi|223029410 talin 1 [Homo sapiens]
Length = 2541
Score = 32.0 bits (71), Expect = 1.0
Identities = 43/191 (22%), Positives = 76/191 (39%), Gaps = 17/191 (8%)
Query: 208 LAPFTAGTSLALTAAGVGLGAASAVTGITTSIVEHSYTSSAEAEASRLTATSIDRLKVFK 267
+A T+ A +AA L A V I + ++ S A+R+ A +
Sbjct: 2352 IAAATSALVKAASAAQRELVAQGKVGAIPANALDDGQWSQGLISAARMVAAA-------- 2403
Query: 268 EVMRDITPNLLSLLNNYYEATQTIGSEIRAIRQARARARLPVTTWRISAGSGGQAERTIA 327
T NL N + + I + +Q A + ++ A +A + +
Sbjct: 2404 ------TNNLCEAANAAVQGHASQEKLISSAKQVAASTAQLLVACKVKADQDSEAMKRLQ 2457
Query: 328 GTTRAVSRGARIL--SATTSGIFLALDVVNLVYESKHLHEGAKSASA-EELRRQAQELEE 384
AV R + L +A + F + +V + K + A+ +A EE+ R+ +ELEE
Sbjct: 2458 AAGNAVKRASDNLVKAAQKAAAFEEQENETVVVKEKMVGGIAQIIAAQEEMLRKERELEE 2517
Query: 385 NLMELTQIYQR 395
+L QI Q+
Sbjct: 2518 ARKKLAQIRQQ 2528
>gi|169214154 PREDICTED: hypothetical protein [Homo sapiens]
Length = 737
Score = 32.0 bits (71), Expect = 1.0
Identities = 19/79 (24%), Positives = 37/79 (46%)
Query: 181 HRGCTISNVVSSSTGAASGIMSLAGLVLAPFTAGTSLALTAAGVGLGAASAVTGITTSIV 240
H I++ S+S+ + + S + + + FT TS+ T++ ++A T + SI
Sbjct: 105 HHTLHITSNSSTSSSSTTSSTSTSSFITSSFTTSTSITSTSSTSSFTTSTATTSTSISIT 164
Query: 241 EHSYTSSAEAEASRLTATS 259
S SS+ S T ++
Sbjct: 165 STSSISSSITSTSTSTTST 183
>gi|169213511 PREDICTED: hypothetical protein [Homo sapiens]
Length = 737
Score = 32.0 bits (71), Expect = 1.0
Identities = 19/79 (24%), Positives = 37/79 (46%)
Query: 181 HRGCTISNVVSSSTGAASGIMSLAGLVLAPFTAGTSLALTAAGVGLGAASAVTGITTSIV 240
H I++ S+S+ + + S + + + FT TS+ T++ ++A T + SI
Sbjct: 105 HHTLHITSNSSTSSSSTTSSTSTSSFITSSFTTSTSITSTSSTSSFTTSTATTSTSISIT 164
Query: 241 EHSYTSSAEAEASRLTATS 259
S SS+ S T ++
Sbjct: 165 STSSISSSITSTSTSTTST 183
>gi|87116683 proline/serine-rich coiled-coil 2 [Homo sapiens]
Length = 1989
Score = 31.2 bits (69), Expect = 1.7
Identities = 32/130 (24%), Positives = 57/130 (43%), Gaps = 10/130 (7%)
Query: 53 EVGSTQLRTAGSCSHSFKRSFLEKKRFTEEATKYFRERVSPVHLQILLTNNEAWKRFVTA 112
E+ QLR S S K E++ E K + + ++ + A K TA
Sbjct: 368 ELSELQLRLLALQSASKKWQQKEQQVMKESKEKLTKTKTVQQKVKTSTKTHSAKKVSTTA 427
Query: 113 AELPRDEADALYEALKKLRTYAAIEDEYVQQKDEQFREWFLKEFPQVKRKIQESIEKLRA 172
+ R + ++ L++ + E +QK+E R+ +E +RK +E I K+R
Sbjct: 428 KQALRKQQTKAWKKLQQ-------QKEQERQKEEDQRKQAEEE---ERRKREEEIRKIRD 477
Query: 173 LANGIEEVHR 182
L+N E+ +R
Sbjct: 478 LSNQEEQYNR 487
>gi|24234688 heat shock 70kDa protein 9 precursor [Homo sapiens]
Length = 679
Score = 30.8 bits (68), Expect = 2.3
Identities = 25/114 (21%), Positives = 50/114 (43%), Gaps = 4/114 (3%)
Query: 59 LRTAGSCSHSFKRSFLEKKRFTEEATKYFRERVSPVHLQILLTNNEAWKRFVTAAELPRD 118
++++G S + ++ E + +ERV V++ + ++ K +LP D
Sbjct: 547 IQSSGGLSKDDIENMVKNAEKYAEEDRRKKERVEAVNMAEGIIHDTETKMEEFKDQLPAD 606
Query: 119 EADALYEALKKLRTYAAIED----EYVQQKDEQFREWFLKEFPQVKRKIQESIE 168
E + L E + K+R A +D E ++Q ++ LK F +K+ E
Sbjct: 607 ECNKLKEEISKMRELLARKDSETGENIRQAASSLQQASLKLFEMAYKKMASERE 660
>gi|155969697 keratin 6C [Homo sapiens]
Length = 564
Score = 30.8 bits (68), Expect = 2.3
Identities = 37/150 (24%), Positives = 71/150 (47%), Gaps = 26/150 (17%)
Query: 122 ALYEALKKLRTYAAIEDEYVQQKDEQFREWFLKEFPQVK-------------RKIQESIE 168
AL +A KL +ED + K + R LKE+ ++ RK+ E E
Sbjct: 419 ALKDAKNKLE---GLEDALQKAKQDLAR--LLKEYQELMNVKLALDVEIATYRKLLEG-E 472
Query: 169 KLRALANGIEEVHRGCTISNVVSSSTGAASGIMSLAGL-VLAPFTAGTSLAL-----TAA 222
+ R G+ +V+ + + +SS G ASG+ S GL + ++ G+ L + +++
Sbjct: 473 ECRLNGEGVGQVNVS-VVQSTISSGYGGASGVGSGLGLGGGSSYSYGSGLGIGGGFSSSS 531
Query: 223 GVGLGAASAVTGITTSIVEHSYTSSAEAEA 252
G +G + G +S ++++ TSS+ ++
Sbjct: 532 GRAIGGGLSSVGGGSSTIKYTTTSSSSRKS 561
>gi|5031839 keratin 6A [Homo sapiens]
Length = 564
Score = 30.8 bits (68), Expect = 2.3
Identities = 38/150 (25%), Positives = 71/150 (47%), Gaps = 26/150 (17%)
Query: 122 ALYEALKKLRTYAAIEDEYVQQKDEQFREWFLKEFPQVK-------------RKIQESIE 168
AL +A KL +ED + K + R LKE+ ++ RK+ E E
Sbjct: 419 ALKDAKNKLE---GLEDALQKAKQDLAR--LLKEYQELMNVKLALDVEIATYRKLLEG-E 472
Query: 169 KLRALANGIEEVHRGCTISNVVSSSTGAASGIMSLAGL-VLAPFTAGTSLAL-----TAA 222
+ R G+ +V+ + + VSS G ASG+ S GL + ++ G+ L + +++
Sbjct: 473 ECRLNGEGVGQVNIS-VVQSTVSSGYGGASGVGSGLGLGGGSSYSYGSGLGVGGGFSSSS 531
Query: 223 GVGLGAASAVTGITTSIVEHSYTSSAEAEA 252
G +G + G +S ++++ TSS+ ++
Sbjct: 532 GRAIGGGLSSVGGGSSTIKYTTTSSSSRKS 561
>gi|10092601 eukaryotic translation initiation factor 4 gamma, 3
[Homo sapiens]
Length = 1585
Score = 30.8 bits (68), Expect = 2.3
Identities = 31/131 (23%), Positives = 55/131 (41%), Gaps = 17/131 (12%)
Query: 80 TEEA--TKYFRERVSPVHLQILLTNNEAWKRFVTAAELPRDEADALYEALK-----KLRT 132
TEE ++ R SPV QI +T + WK+ P+D E L+ K
Sbjct: 481 TEEILDSQNLNSRRSPVPAQIAITVPKTWKK-------PKDRTRTTEEMLEAELELKAEE 533
Query: 133 YAAIEDEYVQQKDEQFREWFLKEFPQVKRK---IQESIEKLRALANGIEEVHRGCTISNV 189
+I+ ++D+ + + + P +K ++E+ E+ + NG E V G I
Sbjct: 534 ELSIDKVLESEQDKMSQGFHPERDPSDLKKVKAVEENGEEAEPVRNGAESVSEGEGIDAN 593
Query: 190 VSSSTGAASGI 200
S+ + G+
Sbjct: 594 SGSTDSSGDGV 604
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.129 0.367
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,507,890
Number of Sequences: 37866
Number of extensions: 477792
Number of successful extensions: 2559
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 40
Number of HSP's that attempted gapping in prelim test: 2488
Number of HSP's gapped (non-prelim): 103
length of query: 402
length of database: 18,247,518
effective HSP length: 105
effective length of query: 297
effective length of database: 14,271,588
effective search space: 4238661636
effective search space used: 4238661636
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.