APOL1 13713

Name: APOL1	Sequence: fasta or formatted (414aa)		NCBI GI: 21735616
Description: apolipoprotein L1 isoform b precursor		Referenced in: Lipoproteins
Other entries for this name: alt prot [398aa] apolipoprotein L1 isoform a precursor alt prot [380aa] apolipoprotein L1 isoform c precursor alt prot [398aa] apolipoprotein L1 isoform a precursor
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.7 36 3 C cysteine 0.5 2 1 D aspartate 4.8 20 1 E glutamate 8.5 35 2 F phenylalanine 2.9 12 2 G glycine 7.0 29 2 H histidine 1.7 7 1 I isoleucine 4.6 19 1 K lysine 6.3 26 2 L leucine 12.3 51 5 M methionine 2.4 10 1 N asparagine 4.6 19 3 P proline 3.4 14 1 Q glutamine 3.9 16 2 R arginine 5.8 24 2 S serine 7.5 31 2 T threonine 4.8 20 2 V valine 7.0 29 2 W tryptophan 1.7 7 2 Y tyrosine 1.7 7 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 apolipoprotein L1 isoform b precursor APOL1 0.957 apolipoprotein L1 isoform a precursor APOL1 0.957 apolipoprotein L1 isoform a precursor APOL1 0.901 apolipoprotein L1 isoform c precursor APOL2 0.454 apolipoprotein L2 APOL2 0.454 apolipoprotein L2 APOL3 0.328 apolipoprotein L3 isoform 1 APOL4 0.269 apolipoprotein L4 isoform 2 precursor APOL4 0.254 apolipoprotein L4 isoform 1 APOL3 0.161 apolipoprotein L3 isoform 3 APOL3 0.161 apolipoprotein L3 isoform 3 APOL6 0.152 apolipoprotein L6 APOL5 0.108 apolipoprotein L5 APOLD1 0.027 apolipoprotein L domain containing 1 isoform 1 [Hom... APOLD1 0.027 apolipoprotein L domain containing 1 isoform 2 [Hom... KDM1 0.010 amine oxidase (flavin containing) domain 2 isoform a... GPI 0.009 glucose phosphate isomerase SYNC 0.008 syncoilin, intermediate filament 1 isoform 2 SYNC 0.008 syncoilin, intermediate filament 1 isoform 1 ARHGAP21 0.006 Rho GTPase activating protein 21 KTN1 0.006 kinectin 1 isoform b KTN1 0.006 kinectin 1 isoform c KIF16B 0.006 kinesin-like motor protein C20orf23 CCDC49 0.006 coiled-coil domain containing 49 SH3KBP1 0.005 SH3-domain kinase binding protein 1 isoform b SH3KBP1 0.005 SH3-domain kinase binding protein 1 isoform a JAKMIP2 0.005 Janus kinase and microtubule interacting protein 2 [... IFT57 0.005 estrogen-related receptor beta like 1 PPAN-P2RY11 0.005 PPAN-P2RY11 protein PPAN 0.005 peter pan homolog Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.