APOL1 13712

Name: APOL1	Sequence: fasta or formatted (398aa)		NCBI GI: 21735614
Description: apolipoprotein L1 isoform a precursor		Referenced in: Lipoproteins
Other entries for this name: alt mRNA [398aa] apolipoprotein L1 isoform a precursor alt prot [380aa] apolipoprotein L1 isoform c precursor alt prot [414aa] apolipoprotein L1 isoform b precursor
Composition: Amino acid Percentage Count Longest homopolymer A alanine 9.0 36 3 C cysteine 0.3 1 1 D aspartate 4.8 19 1 E glutamate 8.5 34 2 F phenylalanine 2.8 11 2 G glycine 7.3 29 2 H histidine 1.5 6 1 I isoleucine 4.8 19 1 K lysine 6.3 25 2 L leucine 12.6 50 5 M methionine 2.3 9 1 N asparagine 4.8 19 3 P proline 3.3 13 1 Q glutamine 4.0 16 2 R arginine 5.3 21 2 S serine 7.3 29 2 T threonine 4.8 19 2 V valine 7.0 28 2 W tryptophan 1.8 7 2 Y tyrosine 1.8 7 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 apolipoprotein L1 isoform a precursor APOL1 1.000 apolipoprotein L1 isoform a precursor APOL1 1.000 apolipoprotein L1 isoform b precursor APOL1 0.942 apolipoprotein L1 isoform c precursor APOL2 0.474 apolipoprotein L2 APOL2 0.474 apolipoprotein L2 APOL3 0.343 apolipoprotein L3 isoform 1 APOL4 0.282 apolipoprotein L4 isoform 2 precursor APOL4 0.266 apolipoprotein L4 isoform 1 APOL3 0.169 apolipoprotein L3 isoform 3 APOL3 0.169 apolipoprotein L3 isoform 3 APOL6 0.159 apolipoprotein L6 APOL5 0.113 apolipoprotein L5 APOLD1 0.028 apolipoprotein L domain containing 1 isoform 1 [Hom... APOLD1 0.028 apolipoprotein L domain containing 1 isoform 2 [Hom... KDM1 0.011 amine oxidase (flavin containing) domain 2 isoform a... GPI 0.009 glucose phosphate isomerase SYNC 0.008 syncoilin, intermediate filament 1 isoform 2 SYNC 0.008 syncoilin, intermediate filament 1 isoform 1 ARHGAP21 0.007 Rho GTPase activating protein 21 KTN1 0.007 kinectin 1 isoform b KTN1 0.007 kinectin 1 isoform c KIF16B 0.007 kinesin-like motor protein C20orf23 CCDC49 0.007 coiled-coil domain containing 49 SH3KBP1 0.005 SH3-domain kinase binding protein 1 isoform b SH3KBP1 0.005 SH3-domain kinase binding protein 1 isoform a JAKMIP2 0.005 Janus kinase and microtubule interacting protein 2 [... IFT57 0.005 estrogen-related receptor beta like 1 PPAN-P2RY11 0.005 PPAN-P2RY11 protein PPAN 0.005 peter pan homolog Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.