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Search of human proteins with 217416388
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|217416388 neuralized homolog 1B [Homo sapiens]
(555 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|217416388 neuralized homolog 1B [Homo sapiens] 1144 0.0
gi|223278368 neuralized-like [Homo sapiens] 427 e-119
gi|53829370 neuralized homolog 4 isoform 1 [Homo sapiens] 67 4e-11
gi|53829368 neuralized homolog 4 isoform 2 [Homo sapiens] 67 4e-11
gi|18152787 neuralized-like protein 2 [Homo sapiens] 63 8e-10
gi|53729363 leucine rich repeat and sterile alpha motif containi... 59 2e-08
gi|53729361 leucine rich repeat and sterile alpha motif containi... 59 2e-08
gi|53729359 leucine rich repeat and sterile alpha motif containi... 59 2e-08
gi|62865649 rififylin [Homo sapiens] 55 2e-07
gi|17432433 rififylin [Homo sapiens] 55 2e-07
gi|165905613 ring finger and KH domain containing 1 [Homo sapiens] 55 2e-07
gi|58743365 ring finger protein 157 [Homo sapiens] 54 5e-07
gi|214010238 mahogunin, ring finger 1 isoform 4 [Homo sapiens] 53 6e-07
gi|214010236 mahogunin, ring finger 1 isoform 3 [Homo sapiens] 53 6e-07
gi|214010234 mahogunin, ring finger 1 isoform 2 [Homo sapiens] 53 6e-07
gi|44917608 mahogunin, ring finger 1 isoform 1 [Homo sapiens] 53 6e-07
gi|147902746 MEX3A protein [Homo sapiens] 53 8e-07
gi|47716512 mex-3 homolog B [Homo sapiens] 50 7e-06
gi|148229134 ring finger and KH domain containing 2 [Homo sapiens] 49 9e-06
gi|37595539 ring finger protein 34 isoform 1 [Homo sapiens] 49 2e-05
gi|37595537 ring finger protein 34 isoform 2 [Homo sapiens] 49 2e-05
gi|33946285 baculoviral IAP repeat-containing protein 3 [Homo sa... 48 3e-05
gi|4502139 baculoviral IAP repeat-containing protein 3 [Homo sap... 48 3e-05
gi|4502141 baculoviral IAP repeat-containing protein 2 [Homo sap... 47 4e-05
gi|38788243 myosin regulatory light chain interacting protein [H... 45 2e-04
gi|171542821 mitochondrial ubiquitin ligase activator of NFKB 1 ... 44 3e-04
gi|21264330 mindbomb homolog 2 [Homo sapiens] 44 5e-04
gi|14042925 ring finger protein 26 [Homo sapiens] 44 5e-04
gi|5729765 cell growth regulator with ring finger domain 1 [Homo... 43 7e-04
gi|45387949 ring finger and SPRY domain containing 1 [Homo sapiens] 43 7e-04
>gi|217416388 neuralized homolog 1B [Homo sapiens]
Length = 555
Score = 1144 bits (2959), Expect = 0.0
Identities = 555/555 (100%), Positives = 555/555 (100%)
Query: 1 MGNTVHRTLPDPSPPARLLATRPCCGPGPERRPVLGEAPRFHAQAKGKNVRLDGHSRRAT 60
MGNTVHRTLPDPSPPARLLATRPCCGPGPERRPVLGEAPRFHAQAKGKNVRLDGHSRRAT
Sbjct: 1 MGNTVHRTLPDPSPPARLLATRPCCGPGPERRPVLGEAPRFHAQAKGKNVRLDGHSRRAT 60
Query: 61 RRNSFCNGVTFTQRPIRLYEQVRLRLVAVRPGWSGALRFGFTAHDPSLMSAQDIPKYACP 120
RRNSFCNGVTFTQRPIRLYEQVRLRLVAVRPGWSGALRFGFTAHDPSLMSAQDIPKYACP
Sbjct: 61 RRNSFCNGVTFTQRPIRLYEQVRLRLVAVRPGWSGALRFGFTAHDPSLMSAQDIPKYACP 120
Query: 121 DLVTRPGYWAKALPENLALRDTVLAYWADRHGRVFYSVNDGEPVLFHCGVAVGGPLWALI 180
DLVTRPGYWAKALPENLALRDTVLAYWADRHGRVFYSVNDGEPVLFHCGVAVGGPLWALI
Sbjct: 121 DLVTRPGYWAKALPENLALRDTVLAYWADRHGRVFYSVNDGEPVLFHCGVAVGGPLWALI 180
Query: 181 DVYGITDEVQLLESAFADTLTPARLSQARFSACLPPSSHDAANFDNNELENNQVVAKLGH 240
DVYGITDEVQLLESAFADTLTPARLSQARFSACLPPSSHDAANFDNNELENNQVVAKLGH
Sbjct: 181 DVYGITDEVQLLESAFADTLTPARLSQARFSACLPPSSHDAANFDNNELENNQVVAKLGH 240
Query: 241 LALGRAPGPPPADAAAAAIPCGPRERPRPASSPALLEADLRFHATRGPDVSLSADRKVAC 300
LALGRAPGPPPADAAAAAIPCGPRERPRPASSPALLEADLRFHATRGPDVSLSADRKVAC
Sbjct: 241 LALGRAPGPPPADAAAAAIPCGPRERPRPASSPALLEADLRFHATRGPDVSLSADRKVAC 300
Query: 301 APRPDGGRTLVFSERPLRPGESLFVEVGRPGLAAPGALAFGITSCDPGVLRPNELPADPD 360
APRPDGGRTLVFSERPLRPGESLFVEVGRPGLAAPGALAFGITSCDPGVLRPNELPADPD
Sbjct: 301 APRPDGGRTLVFSERPLRPGESLFVEVGRPGLAAPGALAFGITSCDPGVLRPNELPADPD 360
Query: 361 ALLDRKEYWVVARAGPVPSGGDALSFTLRPGGDVLLGINGRPRGRLLCVDTTQALWAFFA 420
ALLDRKEYWVVARAGPVPSGGDALSFTLRPGGDVLLGINGRPRGRLLCVDTTQALWAFFA
Sbjct: 361 ALLDRKEYWVVARAGPVPSGGDALSFTLRPGGDVLLGINGRPRGRLLCVDTTQALWAFFA 420
Query: 421 VRGGVAGQLRLLGTLQSSPATTTPSGSLSGSQDDSDSDMTFSVNQSSSASESSLVTAPSS 480
VRGGVAGQLRLLGTLQSSPATTTPSGSLSGSQDDSDSDMTFSVNQSSSASESSLVTAPSS
Sbjct: 421 VRGGVAGQLRLLGTLQSSPATTTPSGSLSGSQDDSDSDMTFSVNQSSSASESSLVTAPSS 480
Query: 481 PLSPPVSPVFSPPEPAGIKNGECTVCFDGEVDTVIYTCGHMCLCHSCGLRLKRQARACCP 540
PLSPPVSPVFSPPEPAGIKNGECTVCFDGEVDTVIYTCGHMCLCHSCGLRLKRQARACCP
Sbjct: 481 PLSPPVSPVFSPPEPAGIKNGECTVCFDGEVDTVIYTCGHMCLCHSCGLRLKRQARACCP 540
Query: 541 ICRRPIKDVIKIYRP 555
ICRRPIKDVIKIYRP
Sbjct: 541 ICRRPIKDVIKIYRP 555
>gi|223278368 neuralized-like [Homo sapiens]
Length = 574
Score = 427 bits (1099), Expect = e-119
Identities = 237/526 (45%), Positives = 312/526 (59%), Gaps = 30/526 (5%)
Query: 41 FHAQAKGKNVRLDGHSRRATRRNSFCNGVTFTQRPIRLYEQVRLRLVAVRPGWSGALRFG 100
FH KG + +D + R+ SFCN +TF+ RP+ +YEQVRL++ + WSGALR G
Sbjct: 65 FHPHTKGSQILMDLSHKAVKRQASFCNAITFSNRPVLIYEQVRLKITKKQCCWSGALRLG 124
Query: 101 FTAHDPSLMSAQDIPKYACPDLVTRPGYWAKALPENLALRDTVLAYWADRHGRVFYSVND 160
FT+ DPS + +PKYACPDLV++ G+WAKALPE A ++A+W D+ GRVF+ +ND
Sbjct: 125 FTSKDPSRIHPDSLPKYACPDLVSQSGFWAKALPEEFANEGNIIAFWVDKKGRVFHRIND 184
Query: 161 GEPVLFHCGVAVGGPLWALIDVYGITDEVQLLESAFADTLTPARLSQARFSACLPPSSHD 220
+LF GV PLWAL+DVYG+T VQLL+S + + P L F+A PS
Sbjct: 185 SAVMLFFSGVRTADPLWALVDVYGLTRGVQLLDS---ELVLPDCLRPRSFTALRRPSL-- 239
Query: 221 AANFDNNELENNQVVAKLGHLALGRAPGPPPADAAAAAIPCGPRERPRPASSPALLEADL 280
E ++ ++ L L + A G A AA IP + PA L+ DL
Sbjct: 240 -----RREADDARLSVSLCDLNVPGADGDEAAPAAGCPIPQNSLNSQHSRALPAQLDGDL 294
Query: 281 RFHATR-GPDVSLSADRKVACAPRPDGGRTLVFSERPLRPGESLFVEVGRPGLAAPGALA 339
RFHA R G V + ++ VA R LVF+ RP+R E++FV+V R G A PGAL+
Sbjct: 295 RFHALRAGAHVRILDEQTVARVEHGRDERALVFTSRPVRVAETIFVKVTRSGGARPGALS 354
Query: 340 FGITSCDPGVLRPNELPADPDALLDRKEYWVVARA-GPVPSGGDALSFTLRPGGDVLLGI 398
FG+T+CDPG LRP +LP P+AL+DRKE+W V R GP+ S GD L + G++ L
Sbjct: 355 FGVTTCDPGTLRPADLPFSPEALVDRKEFWAVCRVPGPLHS-GDILGLVVNADGELHLSH 413
Query: 399 NGRPRGRLLCVDTTQALWAFFAVRGGVAGQLRLLG----------TLQSSPATTTPSGSL 448
NG G LCVD +Q LW F + G + Q+R+LG +L SPA+T S S
Sbjct: 414 NGAAAGMQLCVDASQPLWMLFGLHGTIT-QIRILGSTILAERGIPSLPCSPASTPTSPSA 472
Query: 449 SGSQDDSDSDMTFSVNQSSSASESSLVTAPSSPLSPPVSPVFSPPEPAGIKNGECTVCFD 508
GS+ SD S S S+ TAP+SP+S P SPV G + ECT+C++
Sbjct: 473 LGSR---LSDPLLSTCSSGPLGSSAGGTAPNSPVSLPESPV---TPGLGQWSDECTICYE 526
Query: 509 GEVDTVIYTCGHMCLCHSCGLRLKRQARACCPICRRPIKDVIKIYR 554
VDTVIYTCGHMCLC++CGLRLK+ ACCPICRRPIKD+IK YR
Sbjct: 527 HAVDTVIYTCGHMCLCYACGLRLKKALHACCPICRRPIKDIIKTYR 572
>gi|53829370 neuralized homolog 4 isoform 1 [Homo sapiens]
Length = 1562
Score = 67.0 bits (162), Expect = 4e-11
Identities = 94/389 (24%), Positives = 152/389 (39%), Gaps = 80/389 (20%)
Query: 26 GPGPERRPVLGEAPRFHAQAKGKNVRLDGHSRRATRRN---SFCNGVTFTQRPIRLYEQV 82
G GP LG H + G+ V L R A R+ F +G+ ++ P+R
Sbjct: 29 GSGPGSNGGLGSGGELHPRT-GRLVSLSACGRTARRQQPGQEFNHGLVLSREPLRDGRVF 87
Query: 83 RLRLVAVRPGWSGALRFGFTAHDPSLMSAQDIPKYACPDLVTRPGYWAKALPENLALRDT 142
+R+ WSG++ G TA DPS++ D P A + G W + L +
Sbjct: 88 TVRIDRKVNSWSGSIEIGVTALDPSVL---DFPSSATG---LKGGSWVVSGCSVLRDGRS 141
Query: 143 VLAYWADRHGRVFYSVNDGEPVLFH---------------CGVAVGG---PLWALIDVYG 184
VL + +G+ + +G+ V CGVA G +WA++D+YG
Sbjct: 142 VL----EEYGQDLDQLGEGDRVGVERTVAGELRLWVNGRDCGVAATGLPPRVWAVVDLYG 197
Query: 185 ITDEVQLL------------------------ESAFAD---------TLTPARLSQARFS 211
++ +L +SA A+ ++PA+ F
Sbjct: 198 KCTQITVLPPEPGFSPPTPIPTPPLEPLAPTEDSALAEQGTSADEAFMVSPAQARPETFP 257
Query: 212 ACLPPSSHDAANFDNNELENNQVVAKLGHLALGRAPGPPPADAAAAAIPCGPRERPRPAS 271
L S +D AN + +E+ +N +++ L PPA + A+
Sbjct: 258 NSL-ESHNDFANMELSEVVSNTILSAYNGGLLNVNLSSPPAGEGLGS--------SGAAT 308
Query: 272 SPALLEAD-LRFHATRGPDVSLSADRKVACAPRP--DGGRTLVFSERPLRPGESLFVEVG 328
SP L D L FH G + LS + K A RP + +V + RPLR E + +
Sbjct: 309 SPILTSNDALLFHEKCGTLIKLSNNNKTAERRRPLDEFNNGVVMTNRPLRDNEMFEIRID 368
Query: 329 RPGLAAPGALAFGITSCDPGVLRPNELPA 357
+ G++ G+T+ +P L E PA
Sbjct: 369 KLVDKWSGSIEIGVTTHNPNSL---EYPA 394
Score = 53.5 bits (127), Expect = 5e-07
Identities = 99/478 (20%), Positives = 166/478 (34%), Gaps = 99/478 (20%)
Query: 29 PERRPVLGEAPRFHAQAKGKNVRLDGHSRRATRRNSFCNGVTFTQRPIRLYEQVRLRLVA 88
P PV G A RFH+ GKNV L+ RA R + +G+ F+ + +R E +++
Sbjct: 904 PLHSPVAGVAHRFHSTC-GKNVTLEEDGTRAVRAAGYAHGLVFSTKELRAEEVFEVKVEE 962
Query: 89 VRPGWSGALRFGFTAHDPSLM------SAQDIPKYACPDLVTRPGYWAKALP-------- 134
+ W+G+LR G T P M +P + P+L T+ + +
Sbjct: 963 LDEKWAGSLRLGLTTLAPGEMGPGAGGGGPGLPP-SLPELRTKTTWMVSSCEVRRDGQLQ 1021
Query: 135 --------ENLALRDTV-LAYWADRHGRVFYSVNDGEPVLFHCGVAVGGPLWALIDVYGI 185
E L + V + AD + D P + +WA++D+YG
Sbjct: 1022 RMNYGRNLERLGVGSRVGVRRGADDTMHILVDGEDMGP----AATGIAKNVWAVLDLYGP 1077
Query: 186 TDEVQLLESAFADTLTPARLSQARFSACLPPSSHDAANFDNNELENNQVVAKLGHLALGR 245
V ++ S RL ++ PPS + E + + G +G
Sbjct: 1078 VRGVSIVSS--------TRLEES--EGTQPPSPSSDTGSEGEEDDEGEEHGLGGQNEVG- 1126
Query: 246 APGPPPADAAAAAIPCGPRERPRPASSPALLEADLRFHATRGPDVSLSADRKVACAPRPD 305
++ L F G ++ LS + A
Sbjct: 1127 -----------------------------IIPTTLEFLENHGKNILLSNGNRTATRV-AS 1156
Query: 306 GGRTLVFSERPLRPGESLFVEVGRPGLAAPGALAFGITSCDPGVLRPNELPADPDALLDR 365
+ +V +PL P + V + +L G+ +C P L PA AL +
Sbjct: 1157 YNQGIVVINQPLVPQLLVQVRIDFLNRQWTSSLVLGVITCAPERL---NFPASACAL--K 1211
Query: 366 KEYWVVARAGPVPSG----------------GDALSFTLRPGGDVLLGINGRPRGRLLCV 409
+ W++ G +G G L L G + L +NG +G +
Sbjct: 1212 RAAWLLRGRGVFHNGLKICEKFGPNLDTCPEGTILGLRLDSSGGLHLHVNGVDQG-VAVP 1270
Query: 410 DTTQALWAFFAVRGGVAGQLRLLGTLQSSPATTTPSGSLSGSQDDSD-SDMTFSVNQS 466
D Q A + GQ + + P SG +G+Q D + +DM + +S
Sbjct: 1271 DVPQPCHALV----DLYGQCEQVTIVNPEPGAA--SGKSAGTQGDMEKADMVDGIKES 1322
Score = 51.6 bits (122), Expect = 2e-06
Identities = 65/251 (25%), Positives = 93/251 (37%), Gaps = 33/251 (13%)
Query: 244 GRAPGPPPADAAAAAIPCGPRERPRPASSPALLEADLRFHATRGPDVSLSADRKVACAPR 303
G PGP P P G P S L + H G VSLSA + A +
Sbjct: 12 GGGPGPGPGGGGG---PSGSGSGP---GSNGGLGSGGELHPRTGRLVSLSACGRTARRQQ 65
Query: 304 P--DGGRTLVFSERPLRPGESLFVEVGRPGLAAPGALAFGITSCDPGVLRPNELPADPDA 361
P + LV S PLR G V + R + G++ G+T+ DP VL + P+
Sbjct: 66 PGQEFNHGLVLSREPLRDGRVFTVRIDRKVNSWSGSIEIGVTALDPSVL---DFPSSATG 122
Query: 362 LLDRKEYWVVARAGPVPSG----------------GDALSFTLRPGGDVLLGINGRPRGR 405
L + WVV+ + G GD + G++ L +NGR G
Sbjct: 123 L--KGGSWVVSGCSVLRDGRSVLEEYGQDLDQLGEGDRVGVERTVAGELRLWVNGRDCG- 179
Query: 406 LLCVDTTQALWAFFAVRGGVAGQLRLLGTLQSSPATTTPSGSLSGSQDDSDSDMTFSVNQ 465
+ +WA + G L SP T P+ L DS + Q
Sbjct: 180 VAATGLPPRVWAVVDLYGKCTQITVLPPEPGFSPPTPIPTPPLEPLAPTEDSAL---AEQ 236
Query: 466 SSSASESSLVT 476
+SA E+ +V+
Sbjct: 237 GTSADEAFMVS 247
Score = 48.9 bits (115), Expect = 1e-05
Identities = 116/482 (24%), Positives = 177/482 (36%), Gaps = 92/482 (19%)
Query: 9 LPDPSPPA--RLLATRPCCGPGPERRPVLGEAPRFHAQAKGKNVRLDGHSRRATRRN--- 63
+P+P P ++ + P G G G RFH Q G N + R A R N
Sbjct: 692 VPEPLPEGNNQVSPSSPSSGAG-------GSDLRFH-QLHGSNAVITNGGRTALRHNCRS 743
Query: 64 SFCNGVTFTQRPIRLYEQVRLRLVAVRPGWSGALRFGFTAHDPSLMSAQDIPKYACPDLV 123
F + + + R +R E + + + WSG++ G TA P + P+ +
Sbjct: 744 EFNDAIVISNRALRDGELFEIVIQKMVDRWSGSIEAGVTAIRPEDLEF--------PNTM 795
Query: 124 TRPGYWAKALPENLALRDTVLAYWADRHGRVFYSVNDGEPVLFHCGVAVGGPLWALIDVY 183
T Y + L T + + DG + + G +D
Sbjct: 796 TDIDY------DTWMLSGTAI-------------MQDGNTMRNNYGCD--------LDAL 828
Query: 184 GITDEVQLLESAFADTLTPARLSQARFSAC--LPPSSHDAANFDNNELENNQVVAKLGHL 241
G + ++ +A D L Q + +AC LPP A D + + +
Sbjct: 829 GTGARIGMMRTAKGD-LHYFINGQDQGAACSGLPPGKEVYAVVD--------LYGQCVQV 879
Query: 242 ALGRAPGPPPADAAAAAIPCGPRERPRPASSPALLEADLRFHATRGPDVSLSAD--RKVA 299
++ A GP A + E+ P SP A RFH+T G +V+L D R V
Sbjct: 880 SITNATGPMDNSLATSNTAT---EKSFPLHSPVAGVAH-RFHSTCGKNVTLEEDGTRAVR 935
Query: 300 CAPRPDGGRTLVFSERPLRPGESLFVEVGRPGLAAPGALAFGITSCDPGVLRPNE---LP 356
A G LVFS + LR E V+V G+L G+T+ PG + P P
Sbjct: 936 AAGYAHG---LVFSTKELRAEEVFEVKVEELDEKWAGSLRLGLTTLAPGEMGPGAGGGGP 992
Query: 357 ADPDAL--LDRKEYWVVARAGPVPSG--------------GDALSFTLRPGGDVLLGI-- 398
P +L L K W+V+ G G +R G D + I
Sbjct: 993 GLPPSLPELRTKTTWMVSSCEVRRDGQLQRMNYGRNLERLGVGSRVGVRRGADDTMHILV 1052
Query: 399 NGRPRGRLLCVDTTQALWAFFAVRGGVAGQLRLLGT-LQSSPATTTPS-GSLSGSQDDSD 456
+G G + +WA + G V G + T L+ S T PS S +GS+ + D
Sbjct: 1053 DGEDMGP-AATGIAKNVWAVLDLYGPVRGVSIVSSTRLEESEGTQPPSPSSDTGSEGEED 1111
Query: 457 SD 458
+
Sbjct: 1112 DE 1113
Score = 43.1 bits (100), Expect = 7e-04
Identities = 95/440 (21%), Positives = 155/440 (35%), Gaps = 118/440 (26%)
Query: 3 NTVHRTLPDPSPPARLLATRPCCGPGPERRPVLGEAPRFHAQAKGKNVRLDGHSRRATRR 62
N + R L SP L P PER FH G+ + R A R
Sbjct: 495 NAILRAL---SPEGALRRAAPAAQAEPERL-------LFHPNC-GQKAAITHEGRTALRP 543
Query: 63 NS---FCNGVTFTQRPIRLYEQVRLRLVAVRPGWSGALRFGFTAHDPSLMSAQDIPKYAC 119
++ F +GV + R +R E ++R+ + W+G++ G T H+P+ +
Sbjct: 544 HATDDFNHGVVLSSRALRDGEVFQVRIDKMVDKWAGSIEIGVTTHNPAYLQ--------L 595
Query: 120 PDLVT--RPGYWAKALPENLALRDTVLAYWADRHGRV-------FYSVNDGEPVLFHCGV 170
P +T R G W + T+L + R+ DG F G+
Sbjct: 596 PSTMTNLRSGTWMMTGNGVMHNGTTILDEYGHNLDRLKAGDTVGVVRREDGTLHFFVNGM 655
Query: 171 AVGGPLW-------ALIDVYGITDEVQLLESAFADTLTPARLSQARFSACLPPSSHDAAN 223
G W A++D+YG Q ++ D + A + + LP
Sbjct: 656 TQGPAAWNVPPGVYAVVDLYG-----QAAQATIVDDVEVAPVPEP-----LPEG------ 699
Query: 224 FDNNELENNQVVAKLGHLALGRAPGPPPADAAAAAIPCGPRERPRPASSPALLEADLRFH 283
NNQV +P P + A +DLRFH
Sbjct: 700 -------NNQV-----------SPSSPSSGAGG---------------------SDLRFH 720
Query: 284 ATRGPDVSLSADRKVACAP--RPDGGRTLVFSERPLRPGESLFVEVGRPGLAAPGALAFG 341
G + ++ + A R + +V S R LR GE + + + G++ G
Sbjct: 721 QLHGSNAVITNGGRTALRHNCRSEFNDAIVISNRALRDGELFEIVIQKMVDRWSGSIEAG 780
Query: 342 ITSCDPGVLRPNELPADPDALLD-RKEYWVVARAGPVPSGG----------DALSFTLRP 390
+T+ +RP +L P+ + D + W+++ + G DAL R
Sbjct: 781 VTA-----IRPEDLEF-PNTMTDIDYDTWMLSGTAIMQDGNTMRNNYGCDLDALGTGARI 834
Query: 391 G------GDVLLGINGRPRG 404
G GD+ ING+ +G
Sbjct: 835 GMMRTAKGDLHYFINGQDQG 854
>gi|53829368 neuralized homolog 4 isoform 2 [Homo sapiens]
Length = 1560
Score = 67.0 bits (162), Expect = 4e-11
Identities = 94/389 (24%), Positives = 152/389 (39%), Gaps = 80/389 (20%)
Query: 26 GPGPERRPVLGEAPRFHAQAKGKNVRLDGHSRRATRRN---SFCNGVTFTQRPIRLYEQV 82
G GP LG H + G+ V L R A R+ F +G+ ++ P+R
Sbjct: 29 GSGPGSNGGLGSGGELHPRT-GRLVSLSACGRTARRQQPGQEFNHGLVLSREPLRDGRVF 87
Query: 83 RLRLVAVRPGWSGALRFGFTAHDPSLMSAQDIPKYACPDLVTRPGYWAKALPENLALRDT 142
+R+ WSG++ G TA DPS++ D P A + G W + L +
Sbjct: 88 TVRIDRKVNSWSGSIEIGVTALDPSVL---DFPSSATG---LKGGSWVVSGCSVLRDGRS 141
Query: 143 VLAYWADRHGRVFYSVNDGEPVLFH---------------CGVAVGG---PLWALIDVYG 184
VL + +G+ + +G+ V CGVA G +WA++D+YG
Sbjct: 142 VL----EEYGQDLDQLGEGDRVGVERTVAGELRLWVNGRDCGVAATGLPPRVWAVVDLYG 197
Query: 185 ITDEVQLL------------------------ESAFAD---------TLTPARLSQARFS 211
++ +L +SA A+ ++PA+ F
Sbjct: 198 KCTQITVLPPEPGFSPPTPIPTPPLEPLAPTEDSALAEQGTSADEAFMVSPAQARPETFP 257
Query: 212 ACLPPSSHDAANFDNNELENNQVVAKLGHLALGRAPGPPPADAAAAAIPCGPRERPRPAS 271
L S +D AN + +E+ +N +++ L PPA + A+
Sbjct: 258 NSL-ESHNDFANMELSEVVSNTILSAYNGGLLNVNLSSPPAGEGLGS--------SGAAT 308
Query: 272 SPALLEAD-LRFHATRGPDVSLSADRKVACAPRP--DGGRTLVFSERPLRPGESLFVEVG 328
SP L D L FH G + LS + K A RP + +V + RPLR E + +
Sbjct: 309 SPILTSNDALLFHEKCGTLIKLSNNNKTAERRRPLDEFNNGVVMTNRPLRDNEMFEIRID 368
Query: 329 RPGLAAPGALAFGITSCDPGVLRPNELPA 357
+ G++ G+T+ +P L E PA
Sbjct: 369 KLVDKWSGSIEIGVTTHNPNSL---EYPA 394
Score = 53.5 bits (127), Expect = 5e-07
Identities = 99/478 (20%), Positives = 166/478 (34%), Gaps = 99/478 (20%)
Query: 29 PERRPVLGEAPRFHAQAKGKNVRLDGHSRRATRRNSFCNGVTFTQRPIRLYEQVRLRLVA 88
P PV G A RFH+ GKNV L+ RA R + +G+ F+ + +R E +++
Sbjct: 902 PLHSPVAGVAHRFHSTC-GKNVTLEEDGTRAVRAAGYAHGLVFSTKELRAEEVFEVKVEE 960
Query: 89 VRPGWSGALRFGFTAHDPSLM------SAQDIPKYACPDLVTRPGYWAKALP-------- 134
+ W+G+LR G T P M +P + P+L T+ + +
Sbjct: 961 LDEKWAGSLRLGLTTLAPGEMGPGAGGGGPGLPP-SLPELRTKTTWMVSSCEVRRDGQLQ 1019
Query: 135 --------ENLALRDTV-LAYWADRHGRVFYSVNDGEPVLFHCGVAVGGPLWALIDVYGI 185
E L + V + AD + D P + +WA++D+YG
Sbjct: 1020 RMNYGRNLERLGVGSRVGVRRGADDTMHILVDGEDMGP----AATGIAKNVWAVLDLYGP 1075
Query: 186 TDEVQLLESAFADTLTPARLSQARFSACLPPSSHDAANFDNNELENNQVVAKLGHLALGR 245
V ++ S RL ++ PPS + E + + G +G
Sbjct: 1076 VRGVSIVSS--------TRLEES--EGTQPPSPSSDTGSEGEEDDEGEEHGLGGQNEVG- 1124
Query: 246 APGPPPADAAAAAIPCGPRERPRPASSPALLEADLRFHATRGPDVSLSADRKVACAPRPD 305
++ L F G ++ LS + A
Sbjct: 1125 -----------------------------IIPTTLEFLENHGKNILLSNGNRTATRV-AS 1154
Query: 306 GGRTLVFSERPLRPGESLFVEVGRPGLAAPGALAFGITSCDPGVLRPNELPADPDALLDR 365
+ +V +PL P + V + +L G+ +C P L PA AL +
Sbjct: 1155 YNQGIVVINQPLVPQLLVQVRIDFLNRQWTSSLVLGVITCAPERL---NFPASACAL--K 1209
Query: 366 KEYWVVARAGPVPSG----------------GDALSFTLRPGGDVLLGINGRPRGRLLCV 409
+ W++ G +G G L L G + L +NG +G +
Sbjct: 1210 RAAWLLRGRGVFHNGLKICEKFGPNLDTCPEGTILGLRLDSSGGLHLHVNGVDQG-VAVP 1268
Query: 410 DTTQALWAFFAVRGGVAGQLRLLGTLQSSPATTTPSGSLSGSQDDSD-SDMTFSVNQS 466
D Q A + GQ + + P SG +G+Q D + +DM + +S
Sbjct: 1269 DVPQPCHALV----DLYGQCEQVTIVNPEPGAA--SGKSAGTQGDMEKADMVDGIKES 1320
Score = 51.6 bits (122), Expect = 2e-06
Identities = 65/251 (25%), Positives = 93/251 (37%), Gaps = 33/251 (13%)
Query: 244 GRAPGPPPADAAAAAIPCGPRERPRPASSPALLEADLRFHATRGPDVSLSADRKVACAPR 303
G PGP P P G P S L + H G VSLSA + A +
Sbjct: 12 GGGPGPGPGGGGG---PSGSGSGP---GSNGGLGSGGELHPRTGRLVSLSACGRTARRQQ 65
Query: 304 P--DGGRTLVFSERPLRPGESLFVEVGRPGLAAPGALAFGITSCDPGVLRPNELPADPDA 361
P + LV S PLR G V + R + G++ G+T+ DP VL + P+
Sbjct: 66 PGQEFNHGLVLSREPLRDGRVFTVRIDRKVNSWSGSIEIGVTALDPSVL---DFPSSATG 122
Query: 362 LLDRKEYWVVARAGPVPSG----------------GDALSFTLRPGGDVLLGINGRPRGR 405
L + WVV+ + G GD + G++ L +NGR G
Sbjct: 123 L--KGGSWVVSGCSVLRDGRSVLEEYGQDLDQLGEGDRVGVERTVAGELRLWVNGRDCG- 179
Query: 406 LLCVDTTQALWAFFAVRGGVAGQLRLLGTLQSSPATTTPSGSLSGSQDDSDSDMTFSVNQ 465
+ +WA + G L SP T P+ L DS + Q
Sbjct: 180 VAATGLPPRVWAVVDLYGKCTQITVLPPEPGFSPPTPIPTPPLEPLAPTEDSAL---AEQ 236
Query: 466 SSSASESSLVT 476
+SA E+ +V+
Sbjct: 237 GTSADEAFMVS 247
Score = 47.4 bits (111), Expect = 4e-05
Identities = 114/482 (23%), Positives = 177/482 (36%), Gaps = 94/482 (19%)
Query: 9 LPDPSPPA--RLLATRPCCGPGPERRPVLGEAPRFHAQAKGKNVRLDGHSRRATRRN--- 63
+P+P P ++ + P G G G RFH Q G N + R A R N
Sbjct: 692 VPEPLPEGNNQVSPSSPSSGAG-------GSDLRFH-QLHGSNAVITNGGRTALRHNCRS 743
Query: 64 SFCNGVTFTQRPIRLYEQVRLRLVAVRPGWSGALRFGFTAHDPSLMSAQDIPKYACPDLV 123
F + + + R +R E + + + WSG++ G TA P + P+ +
Sbjct: 744 EFNDAIVISNRALRDGELFEIVIQKMVDRWSGSIEAGVTAIRPEDLEF--------PNTM 795
Query: 124 TRPGYWAKALPENLALRDTVLAYWADRHGRVFYSVNDGEPVLFHCGVAVGGPLWALIDVY 183
T Y + L T + + DG + + G +D
Sbjct: 796 TDIDY------DTWMLSGTAI-------------MQDGNTMRNNYGCD--------LDAL 828
Query: 184 GITDEVQLLESAFADTLTPARLSQARFSAC--LPPSSHDAANFDNNELENNQVVAKLGHL 241
G + ++ +A D L Q + +AC LPP + + + + +
Sbjct: 829 GTGARIGMMRTAKGD-LHYFINGQDQGAACSGLPPEVYAVVD----------LYGQCVQV 877
Query: 242 ALGRAPGPPPADAAAAAIPCGPRERPRPASSPALLEADLRFHATRGPDVSLSAD--RKVA 299
++ A GP A + E+ P SP A RFH+T G +V+L D R V
Sbjct: 878 SITNATGPMDNSLATSNTAT---EKSFPLHSPVAGVAH-RFHSTCGKNVTLEEDGTRAVR 933
Query: 300 CAPRPDGGRTLVFSERPLRPGESLFVEVGRPGLAAPGALAFGITSCDPGVLRPNE---LP 356
A G LVFS + LR E V+V G+L G+T+ PG + P P
Sbjct: 934 AAGYAHG---LVFSTKELRAEEVFEVKVEELDEKWAGSLRLGLTTLAPGEMGPGAGGGGP 990
Query: 357 ADPDAL--LDRKEYWVVARAGPVPSG--------------GDALSFTLRPGGDVLLGI-- 398
P +L L K W+V+ G G +R G D + I
Sbjct: 991 GLPPSLPELRTKTTWMVSSCEVRRDGQLQRMNYGRNLERLGVGSRVGVRRGADDTMHILV 1050
Query: 399 NGRPRGRLLCVDTTQALWAFFAVRGGVAGQLRLLGT-LQSSPATTTPS-GSLSGSQDDSD 456
+G G + +WA + G V G + T L+ S T PS S +GS+ + D
Sbjct: 1051 DGEDMGP-AATGIAKNVWAVLDLYGPVRGVSIVSSTRLEESEGTQPPSPSSDTGSEGEED 1109
Query: 457 SD 458
+
Sbjct: 1110 DE 1111
Score = 43.1 bits (100), Expect = 7e-04
Identities = 95/440 (21%), Positives = 155/440 (35%), Gaps = 118/440 (26%)
Query: 3 NTVHRTLPDPSPPARLLATRPCCGPGPERRPVLGEAPRFHAQAKGKNVRLDGHSRRATRR 62
N + R L SP L P PER FH G+ + R A R
Sbjct: 495 NAILRAL---SPEGALRRAAPAAQAEPERL-------LFHPNC-GQKAAITHEGRTALRP 543
Query: 63 NS---FCNGVTFTQRPIRLYEQVRLRLVAVRPGWSGALRFGFTAHDPSLMSAQDIPKYAC 119
++ F +GV + R +R E ++R+ + W+G++ G T H+P+ +
Sbjct: 544 HATDDFNHGVVLSSRALRDGEVFQVRIDKMVDKWAGSIEIGVTTHNPAYLQ--------L 595
Query: 120 PDLVT--RPGYWAKALPENLALRDTVLAYWADRHGRV-------FYSVNDGEPVLFHCGV 170
P +T R G W + T+L + R+ DG F G+
Sbjct: 596 PSTMTNLRSGTWMMTGNGVMHNGTTILDEYGHNLDRLKAGDTVGVVRREDGTLHFFVNGM 655
Query: 171 AVGGPLW-------ALIDVYGITDEVQLLESAFADTLTPARLSQARFSACLPPSSHDAAN 223
G W A++D+YG Q ++ D + A + + LP
Sbjct: 656 TQGPAAWNVPPGVYAVVDLYG-----QAAQATIVDDVEVAPVPEP-----LPEG------ 699
Query: 224 FDNNELENNQVVAKLGHLALGRAPGPPPADAAAAAIPCGPRERPRPASSPALLEADLRFH 283
NNQV +P P + A +DLRFH
Sbjct: 700 -------NNQV-----------SPSSPSSGAGG---------------------SDLRFH 720
Query: 284 ATRGPDVSLSADRKVACAP--RPDGGRTLVFSERPLRPGESLFVEVGRPGLAAPGALAFG 341
G + ++ + A R + +V S R LR GE + + + G++ G
Sbjct: 721 QLHGSNAVITNGGRTALRHNCRSEFNDAIVISNRALRDGELFEIVIQKMVDRWSGSIEAG 780
Query: 342 ITSCDPGVLRPNELPADPDALLD-RKEYWVVARAGPVPSGG----------DALSFTLRP 390
+T+ +RP +L P+ + D + W+++ + G DAL R
Sbjct: 781 VTA-----IRPEDLEF-PNTMTDIDYDTWMLSGTAIMQDGNTMRNNYGCDLDALGTGARI 834
Query: 391 G------GDVLLGINGRPRG 404
G GD+ ING+ +G
Sbjct: 835 GMMRTAKGDLHYFINGQDQG 854
>gi|18152787 neuralized-like protein 2 [Homo sapiens]
Length = 285
Score = 62.8 bits (151), Expect = 8e-10
Identities = 35/94 (37%), Positives = 51/94 (54%), Gaps = 3/94 (3%)
Query: 40 RFHAQAKGKNVRLDGHSRRATRRNSFCNGVTFTQRPIRLYEQVRLRLVAVRPGWSGALRF 99
RFH + G N+R+D RATR SF +GV F++ P+ + + + GW G LR
Sbjct: 25 RFH-RVHGANIRVDPSGTRATRVESFAHGVCFSREPLAPGQVFLVEIEEKELGWCGHLRL 83
Query: 100 GFTAHDPSLMSAQDIPKYACPDLVTRPGYWAKAL 133
G TA DP+ S +P+++ PDLV W A+
Sbjct: 84 GLTALDPA--SLAPVPEFSLPDLVNLGHTWVFAI 115
Score = 40.8 bits (94), Expect = 0.003
Identities = 34/109 (31%), Positives = 47/109 (43%), Gaps = 12/109 (11%)
Query: 265 ERPRPASSPALLEADLRFHATRGPDVSLSADRKVACAPRPDG-GRTLVFSERPLRPGESL 323
ERP P + RFH G ++ + D A R + + FS PL PG+
Sbjct: 17 ERPEPPPT--------RFHRVHGANIRV--DPSGTRATRVESFAHGVCFSREPLAPGQVF 66
Query: 324 FVEVGRPGLAAPGALAFGITSCDPGVLRPNELPADPDALLDRKEYWVVA 372
VE+ L G L G+T+ DP L P + PD L++ WV A
Sbjct: 67 LVEIEEKELGWCGHLRLGLTALDPASLAPVPEFSLPD-LVNLGHTWVFA 114
>gi|53729363 leucine rich repeat and sterile alpha motif containing
1 [Homo sapiens]
Length = 723
Score = 58.5 bits (140), Expect = 2e-08
Identities = 28/80 (35%), Positives = 40/80 (50%), Gaps = 6/80 (7%)
Query: 475 VTAPSSPLSPPVSPVFS-PPEPAGIKNGECTVCFDGEVDTVIYTCGHMCLCHSCGLRLKR 533
V P++P PP S S PP ++ EC VC + E + CGH+C C C L+
Sbjct: 646 VVTPTAPQEPPESVRPSAPPAELEVQASECVVCLEREAQMIFLNCGHVCCCQQCCQPLR- 704
Query: 534 QARACCPICRRPIKDVIKIY 553
CP+CR+ I ++IY
Sbjct: 705 ----TCPLCRQDIAQRLRIY 720
>gi|53729361 leucine rich repeat and sterile alpha motif containing
1 [Homo sapiens]
Length = 723
Score = 58.5 bits (140), Expect = 2e-08
Identities = 28/80 (35%), Positives = 40/80 (50%), Gaps = 6/80 (7%)
Query: 475 VTAPSSPLSPPVSPVFS-PPEPAGIKNGECTVCFDGEVDTVIYTCGHMCLCHSCGLRLKR 533
V P++P PP S S PP ++ EC VC + E + CGH+C C C L+
Sbjct: 646 VVTPTAPQEPPESVRPSAPPAELEVQASECVVCLEREAQMIFLNCGHVCCCQQCCQPLR- 704
Query: 534 QARACCPICRRPIKDVIKIY 553
CP+CR+ I ++IY
Sbjct: 705 ----TCPLCRQDIAQRLRIY 720
>gi|53729359 leucine rich repeat and sterile alpha motif containing
1 [Homo sapiens]
Length = 723
Score = 58.5 bits (140), Expect = 2e-08
Identities = 28/80 (35%), Positives = 40/80 (50%), Gaps = 6/80 (7%)
Query: 475 VTAPSSPLSPPVSPVFS-PPEPAGIKNGECTVCFDGEVDTVIYTCGHMCLCHSCGLRLKR 533
V P++P PP S S PP ++ EC VC + E + CGH+C C C L+
Sbjct: 646 VVTPTAPQEPPESVRPSAPPAELEVQASECVVCLEREAQMIFLNCGHVCCCQQCCQPLR- 704
Query: 534 QARACCPICRRPIKDVIKIY 553
CP+CR+ I ++IY
Sbjct: 705 ----TCPLCRQDIAQRLRIY 720
>gi|62865649 rififylin [Homo sapiens]
Length = 363
Score = 55.1 bits (131), Expect = 2e-07
Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 5/60 (8%)
Query: 495 PAGIKNGECTVCFDGEVDTVIYTCGHMCLCHSCGLRLKRQARACCPICRRPIKDVIKIYR 554
P+G++ C +C D +D V+ CGHM C CG R+ CPICR+ + + ++R
Sbjct: 308 PSGLEENLCKICMDSPIDCVLLECGHMVTCTKCGKRMNE-----CPICRQYVIRAVHVFR 362
>gi|17432433 rififylin [Homo sapiens]
Length = 363
Score = 55.1 bits (131), Expect = 2e-07
Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 5/60 (8%)
Query: 495 PAGIKNGECTVCFDGEVDTVIYTCGHMCLCHSCGLRLKRQARACCPICRRPIKDVIKIYR 554
P+G++ C +C D +D V+ CGHM C CG R+ CPICR+ + + ++R
Sbjct: 308 PSGLEENLCKICMDSPIDCVLLECGHMVTCTKCGKRMNE-----CPICRQYVIRAVHVFR 362
>gi|165905613 ring finger and KH domain containing 1 [Homo sapiens]
Length = 651
Score = 54.7 bits (130), Expect = 2e-07
Identities = 31/101 (30%), Positives = 46/101 (45%), Gaps = 10/101 (9%)
Query: 463 VNQSSSASESSLVTAPSSPLSPPVSPVFS--------PPEPAGIKN--GECTVCFDGEVD 512
V+ A+ S+ + PSSP + +P+ S PP + EC VC +GEV
Sbjct: 550 VSFPGGAAFSTATSLPSSPAAAACAPLDSGASENSRKPPSASSAPALARECVVCAEGEVM 609
Query: 513 TVIYTCGHMCLCHSCGLRLKRQARACCPICRRPIKDVIKIY 553
+ CGH C C +R+ ++ CP CR P I I+
Sbjct: 610 AALVPCGHNLFCMDCAVRICGKSEPECPACRTPATQAIHIF 650
Score = 33.1 bits (74), Expect = 0.68
Identities = 37/127 (29%), Positives = 44/127 (34%), Gaps = 17/127 (13%)
Query: 242 ALGRAPGP---PPADAAAAAIPCGPRERPRPASSPALLEADLRFHATRG------PDVSL 292
A G PGP PP + A A P PR P P + A L L + G D
Sbjct: 23 AAGEDPGPGPAPPPEGAQEAAP-APRPPPEPDDAAAALRLALDQLSALGLGGAGDTDEEG 81
Query: 293 SADRKVACAPRPDGGRTLVFSERPLRPGESLFVEVGRPGLAAPGALAFGITSCDPGVLRP 352
+A A A DGG + P+ P E G P AP + DP P
Sbjct: 82 AAGDGAAAAGGADGGA----APEPVPPDGP---EAGAPPTLAPAVAPGSLPLLDPNASPP 134
Query: 353 NELPADP 359
P P
Sbjct: 135 PPPPPRP 141
>gi|58743365 ring finger protein 157 [Homo sapiens]
Length = 679
Score = 53.5 bits (127), Expect = 5e-07
Identities = 23/53 (43%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 500 NGECTVCFDGEVDTVIYTCGHMCLCHSCGLRLKRQARACCPICRRPIKDVIKI 552
+ EC VC DT+I C H+CLC++C L+ QA CPICR P + +++I
Sbjct: 274 SAECVVCLSDVRDTLILPCRHLCLCNTCADTLRYQANN-CPICRLPFRALLQI 325
>gi|214010238 mahogunin, ring finger 1 isoform 4 [Homo sapiens]
Length = 531
Score = 53.1 bits (126), Expect = 6e-07
Identities = 24/53 (45%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 500 NGECTVCFDGEVDTVIYTCGHMCLCHSCGLRLKRQARACCPICRRPIKDVIKI 552
+ EC VC DT+I C H+CLC SC L+ QA CPICR P + +++I
Sbjct: 276 SNECVVCLSDLRDTLILPCRHLCLCTSCADTLRYQANN-CPICRLPFRALLQI 327
>gi|214010236 mahogunin, ring finger 1 isoform 3 [Homo sapiens]
Length = 552
Score = 53.1 bits (126), Expect = 6e-07
Identities = 24/53 (45%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 500 NGECTVCFDGEVDTVIYTCGHMCLCHSCGLRLKRQARACCPICRRPIKDVIKI 552
+ EC VC DT+I C H+CLC SC L+ QA CPICR P + +++I
Sbjct: 275 SNECVVCLSDLRDTLILPCRHLCLCTSCADTLRYQANN-CPICRLPFRALLQI 326
>gi|214010234 mahogunin, ring finger 1 isoform 2 [Homo sapiens]
Length = 555
Score = 53.1 bits (126), Expect = 6e-07
Identities = 24/53 (45%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 500 NGECTVCFDGEVDTVIYTCGHMCLCHSCGLRLKRQARACCPICRRPIKDVIKI 552
+ EC VC DT+I C H+CLC SC L+ QA CPICR P + +++I
Sbjct: 276 SNECVVCLSDLRDTLILPCRHLCLCTSCADTLRYQANN-CPICRLPFRALLQI 327
>gi|44917608 mahogunin, ring finger 1 isoform 1 [Homo sapiens]
Length = 576
Score = 53.1 bits (126), Expect = 6e-07
Identities = 24/53 (45%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 500 NGECTVCFDGEVDTVIYTCGHMCLCHSCGLRLKRQARACCPICRRPIKDVIKI 552
+ EC VC DT+I C H+CLC SC L+ QA CPICR P + +++I
Sbjct: 275 SNECVVCLSDLRDTLILPCRHLCLCTSCADTLRYQANN-CPICRLPFRALLQI 326
>gi|147902746 MEX3A protein [Homo sapiens]
Length = 520
Score = 52.8 bits (125), Expect = 8e-07
Identities = 38/152 (25%), Positives = 61/152 (40%), Gaps = 28/152 (18%)
Query: 424 GVAGQLRLLGTLQSSPATTTPSGSLSGSQDDSDSDMTFSVNQSSSASESSLVTAPSS--- 480
GV Q G ++SP +G ++ + + + FS SSS+S + P
Sbjct: 374 GVGKQDVYYGVAETSPPLW------AGQENATPTSVLFSSASSSSSSSAKARAGPPGAHR 427
Query: 481 -------------PLSPPVSPV--FSPPEPAGIKNG----ECTVCFDGEVDTVIYTCGHM 521
P PP P+ FS G+++ +C VCF+ EV + CGH
Sbjct: 428 SPATSAGPELAGLPRRPPGEPLQGFSKLGGGGLRSPGGGRDCMVCFESEVTAALVPCGHN 487
Query: 522 CLCHSCGLRLKRQARACCPICRRPIKDVIKIY 553
C C +R+ + CP+C I+I+
Sbjct: 488 LFCMECAVRICERTDPECPVCHITATQAIRIF 519
>gi|47716512 mex-3 homolog B [Homo sapiens]
Length = 569
Score = 49.7 bits (117), Expect = 7e-06
Identities = 27/88 (30%), Positives = 41/88 (46%), Gaps = 13/88 (14%)
Query: 466 SSSASESSLVTAPSSPLSPPVSPVFSPPEPAGIKNGECTVCFDGEVDTVIYTCGHMCLCH 525
SSS+S SS ++ SS L S +C+VCF+ EV + CGH C
Sbjct: 494 SSSSSSSSSSSSSSSGLRRKGSR-------------DCSVCFESEVIAALVPCGHNLFCM 540
Query: 526 SCGLRLKRQARACCPICRRPIKDVIKIY 553
C R+ ++ CP+C + I+I+
Sbjct: 541 ECANRICEKSEPECPVCHTAVTQAIRIF 568
>gi|148229134 ring finger and KH domain containing 2 [Homo sapiens]
Length = 659
Score = 49.3 bits (116), Expect = 9e-06
Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Query: 491 SPPEPAGIKNGECTVCFDGEVDTVIYTCGHMCLCHSCGLRLKRQARACCPICRRPIKDVI 550
SPPE + +C +CF+ EV + CGH C C ++ + CP+C+ + I
Sbjct: 598 SPPESR--RKHDCVICFENEVIAALVPCGHNLFCMECANKICEKRTPSCPVCQTAVTQAI 655
Query: 551 KIY 553
+I+
Sbjct: 656 QIH 658
>gi|37595539 ring finger protein 34 isoform 1 [Homo sapiens]
Length = 373
Score = 48.5 bits (114), Expect = 2e-05
Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 5/52 (9%)
Query: 503 CTVCFDGEVDTVIYTCGHMCLCHSCGLRLKRQARACCPICRRPIKDVIKIYR 554
C +C D +D V+ CGHM C CG R+ CPICR+ + + +++
Sbjct: 326 CRICMDAVIDCVLLECGHMVTCTKCGKRMSE-----CPICRQYVVRAVHVFK 372
>gi|37595537 ring finger protein 34 isoform 2 [Homo sapiens]
Length = 372
Score = 48.5 bits (114), Expect = 2e-05
Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 5/52 (9%)
Query: 503 CTVCFDGEVDTVIYTCGHMCLCHSCGLRLKRQARACCPICRRPIKDVIKIYR 554
C +C D +D V+ CGHM C CG R+ CPICR+ + + +++
Sbjct: 325 CRICMDAVIDCVLLECGHMVTCTKCGKRMSE-----CPICRQYVVRAVHVFK 371
>gi|33946285 baculoviral IAP repeat-containing protein 3 [Homo
sapiens]
Length = 604
Score = 47.8 bits (112), Expect = 3e-05
Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 5/51 (9%)
Query: 503 CTVCFDGEVDTVIYTCGHMCLCHSCGLRLKRQARACCPICRRPIKDVIKIY 553
C VC D EV V CGH+ +C C L++ CPICR IK ++ +
Sbjct: 557 CKVCMDKEVSIVFIPCGHLVVCKDCAPSLRK-----CPICRSTIKGTVRTF 602
>gi|4502139 baculoviral IAP repeat-containing protein 3 [Homo
sapiens]
Length = 604
Score = 47.8 bits (112), Expect = 3e-05
Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 5/51 (9%)
Query: 503 CTVCFDGEVDTVIYTCGHMCLCHSCGLRLKRQARACCPICRRPIKDVIKIY 553
C VC D EV V CGH+ +C C L++ CPICR IK ++ +
Sbjct: 557 CKVCMDKEVSIVFIPCGHLVVCKDCAPSLRK-----CPICRSTIKGTVRTF 602
>gi|4502141 baculoviral IAP repeat-containing protein 2 [Homo
sapiens]
Length = 618
Score = 47.4 bits (111), Expect = 4e-05
Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 5/51 (9%)
Query: 503 CTVCFDGEVDTVIYTCGHMCLCHSCGLRLKRQARACCPICRRPIKDVIKIY 553
C VC D EV V CGH+ +C C L++ CPICR IK ++ +
Sbjct: 571 CKVCMDKEVSVVFIPCGHLVVCQECAPSLRK-----CPICRGIIKGTVRTF 616
>gi|38788243 myosin regulatory light chain interacting protein [Homo
sapiens]
Length = 445
Score = 44.7 bits (104), Expect = 2e-04
Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 5/53 (9%)
Query: 503 CTVCFDGEVDTVIYTCGHMCLCHSCGLRLKRQARACCPICRRPIKDVIKIYRP 555
C VC + E+++ CGH C SC +L+ CP+CR ++ V +Y P
Sbjct: 387 CMVCCEEEINSTFCPCGHTVCCESCAAQLQ-----SCPVCRSRVEHVQHVYLP 434
>gi|171542821 mitochondrial ubiquitin ligase activator of NFKB 1
[Homo sapiens]
Length = 352
Score = 44.3 bits (103), Expect = 3e-04
Identities = 22/61 (36%), Positives = 26/61 (42%), Gaps = 2/61 (3%)
Query: 493 PEPAGIKNGECTVCFDGEVDTVIYTCGHMCLCHSCGLRLKRQARACCPICRRPIKDVIKI 552
PE C VC V CGH+C C C L + CPICR+ I VI +
Sbjct: 292 PEDRESLKSACVVCLSSFKSCVFLECGHVCSCTECYRALPEPKK--CPICRQAITRVIPL 349
Query: 553 Y 553
Y
Sbjct: 350 Y 350
>gi|21264330 mindbomb homolog 2 [Homo sapiens]
Length = 1013
Score = 43.5 bits (101), Expect = 5e-04
Identities = 20/51 (39%), Positives = 30/51 (58%), Gaps = 7/51 (13%)
Query: 503 CTVCFDGEVDTVIYTCGHMCLCHSCGLRLKRQARACCPICRRPIKDVIKIY 553
C +C D + +++ CGH C CG A + CPICR+PI+D I+I+
Sbjct: 969 CPICIDSHI-RLVFQCGHGA-CAPCG-----SALSACPICRQPIRDRIQIF 1012
>gi|14042925 ring finger protein 26 [Homo sapiens]
Length = 433
Score = 43.5 bits (101), Expect = 5e-04
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Query: 502 ECTVCFDGEVDTVIYTCGHMCLCHSCGLRLKRQA--RACCPICRRPIKDVIKIY 553
+C +C D ++ C H+CLC +C L R CP+CRR I + +Y
Sbjct: 379 KCVICQDQSKTVLLLPCRHLCLCQACTEILMRHPVYHRNCPLCRRGILQTLNVY 432
>gi|5729765 cell growth regulator with ring finger domain 1 [Homo
sapiens]
Length = 332
Score = 43.1 bits (100), Expect = 7e-04
Identities = 26/90 (28%), Positives = 43/90 (47%), Gaps = 5/90 (5%)
Query: 459 MTFSVNQSSSASESSLVTAPSSPLSPPVSPVFSPPEPAGIKNGECTVCFDGEVDTVIYTC 518
M+ + N + S + SS L V S EP+ + +C VC +G V+ V+ C
Sbjct: 230 MSANNNFTPSNNSSSEEKNTDRSLLEKVGLSESEVEPSEENSKDCVVCQNGTVNWVLLPC 289
Query: 519 GHMCLCHSCGLRLKRQARACCPICRRPIKD 548
H CLC C ++ CP+CR+ +++
Sbjct: 290 RHTCLCDGCVKYFQQ-----CPMCRQFVQE 314
>gi|45387949 ring finger and SPRY domain containing 1 [Homo sapiens]
Length = 576
Score = 43.1 bits (100), Expect = 7e-04
Identities = 20/54 (37%), Positives = 29/54 (53%), Gaps = 5/54 (9%)
Query: 498 IKNGECTVCFDGEVDTVIYTCGHMCLCHSCGLRLKRQARACCPICRRPIKDVIK 551
I+ C++C D DT + CGH LC C L+L+ CP+CR+ I I+
Sbjct: 522 IRENCCSLCCDEVADTQLKPCGHSDLCMDCALQLE-----TCPLCRKEIVSRIR 570
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.320 0.137 0.436
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 26,659,267
Number of Sequences: 37866
Number of extensions: 1493434
Number of successful extensions: 9402
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 96
Number of HSP's successfully gapped in prelim test: 235
Number of HSP's that attempted gapping in prelim test: 8379
Number of HSP's gapped (non-prelim): 1096
length of query: 555
length of database: 18,247,518
effective HSP length: 107
effective length of query: 448
effective length of database: 14,195,856
effective search space: 6359743488
effective search space used: 6359743488
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.