Guide to the Human Genome
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Name: ATP1B4 Sequence: fasta or formatted (357aa) NCBI GI: 215490093
Description:

ATPase, (Na+)/K+ transporting, beta 4 polypeptide isoform A

Referenced in:

Sodium, Potassium, and Calcium Membrane ATPases

Other entries for this name:
alt prot [353aa] ATPase, (Na+)/K+ transporting, beta 4 polypeptide isoform B
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.2         15           2
 C cysteine            2.0          7           1
 D aspartate           5.3         19           2
 E glutamate          11.2         40           8
 F phenylalanine       5.6         20           3
 G glycine             5.3         19           1
 H histidine           1.1          4           1
 I isoleucine          4.8         17           1
 K lysine              4.5         16           2
 L leucine             7.6         27           2
 M methionine          2.2          8           1
 N asparagine          5.0         18           1
 P proline             6.2         22           2
 Q glutamine           5.0         18           1
 R arginine            5.9         21           2
 S serine              6.2         22           1
 T threonine           4.5         16           1
 V valine              6.4         23           2
 W tryptophan          1.4          5           2
 Y tyrosine            5.6         20           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ATPase, (Na+)/K+ transporting, beta 4 polypeptide i... 
ATP1B4                0.979   ATPase, (Na+)/K+ transporting, beta 4 polypeptide iso...
ATP1B2                0.299   Na+/K+ -ATPase beta 2 subunit 
ATP4B                 0.241   hydrogen/potassium-exchanging ATPase 4B 
ATP1B3                0.227   Na+/K+ -ATPase beta 3 subunit 
ATP1B1                0.218   Na+/K+ -ATPase beta 1 subunit isoform a 
ATP1B1                0.217   Na+/K+ -ATPase beta 1 subunit isoform b 
SLC24A1               0.045   solute carrier family 24 (sodium/potassium/calcium ex...
RANGAP1               0.042   Ran GTPase activating protein 1 
MYT1                  0.041   myelin transcription factor 1 
TTBK1                 0.038   tau tubulin kinase 1 
LOC728792             0.036   PREDICTED: hypothetical protein 
DAXX                  0.036   death-domain associated protein isoform a 
DAXX                  0.036   death-domain associated protein isoform a 
DAXX                  0.036   death-domain associated protein isoform b 
DCAF8L2               0.035   DDB1 and CUL4 associated factor 8-like 2 
EHMT2                 0.035   euchromatic histone-lysine N-methyltransferase 2 is...
EHMT2                 0.035   euchromatic histone-lysine N-methyltransferase 2 is...
MYST4                 0.034   MYST histone acetyltransferase (monocytic leukemia)...
EIF5B                 0.034   eukaryotic translation initiation factor 5B 
SCAF1                 0.034   SR-related CTD-associated factor 1 
PRG2                  0.034   plasticity-related protein 2 
FAM9A                 0.034   family with sequence similarity 9, member A 
CHIC1                 0.034   cysteine-rich hydrophobic domain 1 
CLSPN                 0.034   claspin 
LOC100294088          0.034   PREDICTED: hypothetical protein, partial 
PPARGC1B              0.034   peroxisome proliferator-activated receptor gamma, co...
PRKCSH                0.032   protein kinase C substrate 80K-H isoform 1 
YTHDC1                0.032   splicing factor YT521-B isoform 2 
YTHDC1                0.032   splicing factor YT521-B isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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