Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 215422368
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|215422368 solute carrier family 10, member 3 isoform 2 [Homo
sapiens]
(448 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|215422368 solute carrier family 10, member 3 isoform 2 [Homo ... 866 0.0
gi|215422370 solute carrier family 10, member 3 isoform 1 [Homo ... 851 0.0
gi|9790143 solute carrier family 10, member 3 isoform 1 [Homo sa... 851 0.0
gi|58219066 solute carrier family 10 (sodium/bile acid cotranspo... 273 2e-73
gi|4506971 solute carrier family 10, member 1 [Homo sapiens] 129 7e-30
gi|37537552 sodium-dependent organic anion transporter [Homo sap... 129 7e-30
gi|4506973 solute carrier family 10 (sodium/bile acid cotranspor... 120 2e-27
gi|24308414 solute carrier family 10, member 4 [Homo sapiens] 120 2e-27
gi|74027251 tripartite motif-containing 33 protein isoform beta ... 37 0.047
gi|74027249 tripartite motif-containing 33 protein isoform alpha... 37 0.047
gi|4507545 G protein-coupled receptor 137B [Homo sapiens] 35 0.14
gi|53933282 olfactory receptor, family 6, subfamily C, member 65... 32 0.89
gi|52317150 olfactory receptor, family 51, subfamily D, member 1... 32 1.2
gi|53828708 olfactory receptor, family 6, subfamily C, member 4 ... 32 1.2
gi|53933290 olfactory receptor, family 6, subfamily C, member 68... 32 1.5
gi|56550049 uromodulin precursor [Homo sapiens] 31 2.0
gi|59850812 uromodulin precursor [Homo sapiens] 31 2.0
gi|211971072 FERM and PDZ domain containing 4 [Homo sapiens] 30 5.8
gi|30581164 neuropeptides B/W receptor 2 [Homo sapiens] 30 5.8
gi|229892345 GLI family zinc finger 1 isoform 2 [Homo sapiens] 29 7.6
gi|4885279 GLI family zinc finger 1 isoform 1 [Homo sapiens] 29 7.6
gi|239756458 PREDICTED: similar to ZNF668 protein [Homo sapiens] 29 7.6
gi|239750986 PREDICTED: hypothetical protein XP_002347637 [Homo ... 29 7.6
gi|239745391 PREDICTED: hypothetical protein XP_002343487 [Homo ... 29 7.6
gi|111955162 5-azacytidine induced 1 isoform b [Homo sapiens] 29 7.6
gi|111955084 5-azacytidine induced 1 isoform a [Homo sapiens] 29 7.6
gi|31083156 interleukin 20 receptor, alpha [Homo sapiens] 29 9.9
gi|4826998 splicing factor proline/glutamine rich (polypyrimidin... 29 9.9
>gi|215422368 solute carrier family 10, member 3 isoform 2 [Homo
sapiens]
Length = 448
Score = 866 bits (2238), Expect = 0.0
Identities = 448/448 (100%), Positives = 448/448 (100%)
Query: 1 MVLMQDKGSSQQWPGLGGEGGGTGPLSMLRAALLLISLPWGAQGTASTSLSTAGGHTVPP 60
MVLMQDKGSSQQWPGLGGEGGGTGPLSMLRAALLLISLPWGAQGTASTSLSTAGGHTVPP
Sbjct: 1 MVLMQDKGSSQQWPGLGGEGGGTGPLSMLRAALLLISLPWGAQGTASTSLSTAGGHTVPP 60
Query: 61 TGGRYLSIGDGSVMEFEFPEDSEGIIVISSQYPGQANRTAPGPMLRVTSLDTEVLTIKNL 120
TGGRYLSIGDGSVMEFEFPEDSEGIIVISSQYPGQANRTAPGPMLRVTSLDTEVLTIKNL
Sbjct: 61 TGGRYLSIGDGSVMEFEFPEDSEGIIVISSQYPGQANRTAPGPMLRVTSLDTEVLTIKNL 120
Query: 121 VDAHEAPPTLIEERRDFCIKVSPAEDTPATLSADLAHFSENPILYLLLPLIFVNKCSFGC 180
VDAHEAPPTLIEERRDFCIKVSPAEDTPATLSADLAHFSENPILYLLLPLIFVNKCSFGC
Sbjct: 121 VDAHEAPPTLIEERRDFCIKVSPAEDTPATLSADLAHFSENPILYLLLPLIFVNKCSFGC 180
Query: 181 KVELEVLKGLMQSPQPMLLGLLGQFLVMPLYAFLMAKVFMLPKALALGLIITCSSPGGGG 240
KVELEVLKGLMQSPQPMLLGLLGQFLVMPLYAFLMAKVFMLPKALALGLIITCSSPGGGG
Sbjct: 181 KVELEVLKGLMQSPQPMLLGLLGQFLVMPLYAFLMAKVFMLPKALALGLIITCSSPGGGG 240
Query: 241 SYLFSLLLGGDVTLAISMTFLSTVAATGFLPLSSAIYSRLLSIHETLHVPISKILGTLLF 300
SYLFSLLLGGDVTLAISMTFLSTVAATGFLPLSSAIYSRLLSIHETLHVPISKILGTLLF
Sbjct: 241 SYLFSLLLGGDVTLAISMTFLSTVAATGFLPLSSAIYSRLLSIHETLHVPISKILGTLLF 300
Query: 301 IAIPIAVGVLIKSKLPKFSQLLLQVVKPFSFVLLLGGLFLAYRMGVFILAGIRLPIVLVG 360
IAIPIAVGVLIKSKLPKFSQLLLQVVKPFSFVLLLGGLFLAYRMGVFILAGIRLPIVLVG
Sbjct: 301 IAIPIAVGVLIKSKLPKFSQLLLQVVKPFSFVLLLGGLFLAYRMGVFILAGIRLPIVLVG 360
Query: 361 ITVPLVGLLVGYCLATCLKLPVAQRRTVSIEVGVQNSLLALAMLQLSLRRLQADYASQAP 420
ITVPLVGLLVGYCLATCLKLPVAQRRTVSIEVGVQNSLLALAMLQLSLRRLQADYASQAP
Sbjct: 361 ITVPLVGLLVGYCLATCLKLPVAQRRTVSIEVGVQNSLLALAMLQLSLRRLQADYASQAP 420
Query: 421 FIVALSGTSEMLALVIGHFIYSSLFPVP 448
FIVALSGTSEMLALVIGHFIYSSLFPVP
Sbjct: 421 FIVALSGTSEMLALVIGHFIYSSLFPVP 448
>gi|215422370 solute carrier family 10, member 3 isoform 1 [Homo
sapiens]
Length = 477
Score = 851 bits (2198), Expect = 0.0
Identities = 448/477 (93%), Positives = 448/477 (93%), Gaps = 29/477 (6%)
Query: 1 MVLMQDKGSSQQWPGLGGEGGGTGPLSMLRAALLLISLPWGAQGTASTSLSTAGGHTVPP 60
MVLMQDKGSSQQWPGLGGEGGGTGPLSMLRAALLLISLPWGAQGTASTSLSTAGGHTVPP
Sbjct: 1 MVLMQDKGSSQQWPGLGGEGGGTGPLSMLRAALLLISLPWGAQGTASTSLSTAGGHTVPP 60
Query: 61 TGGRYLSIGDGSVMEFEFPEDSEGIIVISSQYPGQANRTAPGPMLRVTSLDTEVLTIKN- 119
TGGRYLSIGDGSVMEFEFPEDSEGIIVISSQYPGQANRTAPGPMLRVTSLDTEVLTIKN
Sbjct: 61 TGGRYLSIGDGSVMEFEFPEDSEGIIVISSQYPGQANRTAPGPMLRVTSLDTEVLTIKNV 120
Query: 120 ----------------------------LVDAHEAPPTLIEERRDFCIKVSPAEDTPATL 151
LVDAHEAPPTLIEERRDFCIKVSPAEDTPATL
Sbjct: 121 SAITWGGGGGFVVSIHSGLAGLAPLHIQLVDAHEAPPTLIEERRDFCIKVSPAEDTPATL 180
Query: 152 SADLAHFSENPILYLLLPLIFVNKCSFGCKVELEVLKGLMQSPQPMLLGLLGQFLVMPLY 211
SADLAHFSENPILYLLLPLIFVNKCSFGCKVELEVLKGLMQSPQPMLLGLLGQFLVMPLY
Sbjct: 181 SADLAHFSENPILYLLLPLIFVNKCSFGCKVELEVLKGLMQSPQPMLLGLLGQFLVMPLY 240
Query: 212 AFLMAKVFMLPKALALGLIITCSSPGGGGSYLFSLLLGGDVTLAISMTFLSTVAATGFLP 271
AFLMAKVFMLPKALALGLIITCSSPGGGGSYLFSLLLGGDVTLAISMTFLSTVAATGFLP
Sbjct: 241 AFLMAKVFMLPKALALGLIITCSSPGGGGSYLFSLLLGGDVTLAISMTFLSTVAATGFLP 300
Query: 272 LSSAIYSRLLSIHETLHVPISKILGTLLFIAIPIAVGVLIKSKLPKFSQLLLQVVKPFSF 331
LSSAIYSRLLSIHETLHVPISKILGTLLFIAIPIAVGVLIKSKLPKFSQLLLQVVKPFSF
Sbjct: 301 LSSAIYSRLLSIHETLHVPISKILGTLLFIAIPIAVGVLIKSKLPKFSQLLLQVVKPFSF 360
Query: 332 VLLLGGLFLAYRMGVFILAGIRLPIVLVGITVPLVGLLVGYCLATCLKLPVAQRRTVSIE 391
VLLLGGLFLAYRMGVFILAGIRLPIVLVGITVPLVGLLVGYCLATCLKLPVAQRRTVSIE
Sbjct: 361 VLLLGGLFLAYRMGVFILAGIRLPIVLVGITVPLVGLLVGYCLATCLKLPVAQRRTVSIE 420
Query: 392 VGVQNSLLALAMLQLSLRRLQADYASQAPFIVALSGTSEMLALVIGHFIYSSLFPVP 448
VGVQNSLLALAMLQLSLRRLQADYASQAPFIVALSGTSEMLALVIGHFIYSSLFPVP
Sbjct: 421 VGVQNSLLALAMLQLSLRRLQADYASQAPFIVALSGTSEMLALVIGHFIYSSLFPVP 477
>gi|9790143 solute carrier family 10, member 3 isoform 1 [Homo
sapiens]
Length = 477
Score = 851 bits (2198), Expect = 0.0
Identities = 448/477 (93%), Positives = 448/477 (93%), Gaps = 29/477 (6%)
Query: 1 MVLMQDKGSSQQWPGLGGEGGGTGPLSMLRAALLLISLPWGAQGTASTSLSTAGGHTVPP 60
MVLMQDKGSSQQWPGLGGEGGGTGPLSMLRAALLLISLPWGAQGTASTSLSTAGGHTVPP
Sbjct: 1 MVLMQDKGSSQQWPGLGGEGGGTGPLSMLRAALLLISLPWGAQGTASTSLSTAGGHTVPP 60
Query: 61 TGGRYLSIGDGSVMEFEFPEDSEGIIVISSQYPGQANRTAPGPMLRVTSLDTEVLTIKN- 119
TGGRYLSIGDGSVMEFEFPEDSEGIIVISSQYPGQANRTAPGPMLRVTSLDTEVLTIKN
Sbjct: 61 TGGRYLSIGDGSVMEFEFPEDSEGIIVISSQYPGQANRTAPGPMLRVTSLDTEVLTIKNV 120
Query: 120 ----------------------------LVDAHEAPPTLIEERRDFCIKVSPAEDTPATL 151
LVDAHEAPPTLIEERRDFCIKVSPAEDTPATL
Sbjct: 121 SAITWGGGGGFVVSIHSGLAGLAPLHIQLVDAHEAPPTLIEERRDFCIKVSPAEDTPATL 180
Query: 152 SADLAHFSENPILYLLLPLIFVNKCSFGCKVELEVLKGLMQSPQPMLLGLLGQFLVMPLY 211
SADLAHFSENPILYLLLPLIFVNKCSFGCKVELEVLKGLMQSPQPMLLGLLGQFLVMPLY
Sbjct: 181 SADLAHFSENPILYLLLPLIFVNKCSFGCKVELEVLKGLMQSPQPMLLGLLGQFLVMPLY 240
Query: 212 AFLMAKVFMLPKALALGLIITCSSPGGGGSYLFSLLLGGDVTLAISMTFLSTVAATGFLP 271
AFLMAKVFMLPKALALGLIITCSSPGGGGSYLFSLLLGGDVTLAISMTFLSTVAATGFLP
Sbjct: 241 AFLMAKVFMLPKALALGLIITCSSPGGGGSYLFSLLLGGDVTLAISMTFLSTVAATGFLP 300
Query: 272 LSSAIYSRLLSIHETLHVPISKILGTLLFIAIPIAVGVLIKSKLPKFSQLLLQVVKPFSF 331
LSSAIYSRLLSIHETLHVPISKILGTLLFIAIPIAVGVLIKSKLPKFSQLLLQVVKPFSF
Sbjct: 301 LSSAIYSRLLSIHETLHVPISKILGTLLFIAIPIAVGVLIKSKLPKFSQLLLQVVKPFSF 360
Query: 332 VLLLGGLFLAYRMGVFILAGIRLPIVLVGITVPLVGLLVGYCLATCLKLPVAQRRTVSIE 391
VLLLGGLFLAYRMGVFILAGIRLPIVLVGITVPLVGLLVGYCLATCLKLPVAQRRTVSIE
Sbjct: 361 VLLLGGLFLAYRMGVFILAGIRLPIVLVGITVPLVGLLVGYCLATCLKLPVAQRRTVSIE 420
Query: 392 VGVQNSLLALAMLQLSLRRLQADYASQAPFIVALSGTSEMLALVIGHFIYSSLFPVP 448
VGVQNSLLALAMLQLSLRRLQADYASQAPFIVALSGTSEMLALVIGHFIYSSLFPVP
Sbjct: 421 VGVQNSLLALAMLQLSLRRLQADYASQAPFIVALSGTSEMLALVIGHFIYSSLFPVP 477
>gi|58219066 solute carrier family 10 (sodium/bile acid
cotransporter family), member 5 [Homo sapiens]
Length = 438
Score = 273 bits (698), Expect = 2e-73
Identities = 141/330 (42%), Positives = 220/330 (66%), Gaps = 4/330 (1%)
Query: 107 VTSLDTEVLTIKNLVDAHEAPPTLIEERRDFCIKVSPAEDTPATLSADLAHFSENPILYL 166
VT + E L D+ LIEE ++ +KV +D+ L A + H N IL L
Sbjct: 91 VTDEEGETNVTIQLWDSEGRQERLIEEIKNVKVKVLKQKDS--LLQAPM-HIDRN-ILML 146
Query: 167 LLPLIFVNKCSFGCKVELEVLKGLMQSPQPMLLGLLGQFLVMPLYAFLMAKVFMLPKALA 226
+LPLI +NKC+FGCK+EL++ + + + P P++LG + QF +MP FL++++ LP+A A
Sbjct: 147 ILPLILLNKCAFGCKIELQLFQTVWKRPLPVILGAVTQFFLMPFCGFLLSQIVALPEAQA 206
Query: 227 LGLIITCSSPGGGGSYLFSLLLGGDVTLAISMTFLSTVAATGFLPLSSAIYSRLLSIHET 286
G+++TC+ PGGGG YLF+LLL GD TLAI MT ST+ A +P++S IYSR+L + T
Sbjct: 207 FGVVMTCTCPGGGGGYLFALLLDGDFTLAILMTCTSTLLALIMMPVNSYIYSRILGLSGT 266
Query: 287 LHVPISKILGTLLFIAIPIAVGVLIKSKLPKFSQLLLQVVKPFSFVLLLGGLFLAYRMGV 346
H+P+SKI+ TLLFI +P+++G++IK ++P+ + L ++++P SF+L+ G++L + +G+
Sbjct: 267 FHIPVSKIVSTLLFILVPVSIGIVIKHRIPEKASFLERIIRPLSFILMFVGIYLTFTVGL 326
Query: 347 FILAGIRLPIVLVGITVPLVGLLVGYCLATCLKLPVAQRRTVSIEVGVQNSLLALAMLQL 406
L L ++L+G+ VP +GLL GY A LP+ +TV+IE G+ NS LALA++QL
Sbjct: 327 VFLKTDNLEVILLGLLVPALGLLFGYSFAKVCTLPLPVCKTVAIESGMLNSFLALAVIQL 386
Query: 407 SLRRLQADYASQAPFIVALSGTSEMLALVI 436
S + +A+ AS APF VA+ EML +++
Sbjct: 387 SFPQSKANLASVAPFTVAMCSGCEMLLIIL 416
>gi|4506971 solute carrier family 10, member 1 [Homo sapiens]
Length = 349
Score = 129 bits (323), Expect = 7e-30
Identities = 82/247 (33%), Positives = 134/247 (54%), Gaps = 8/247 (3%)
Query: 166 LLLPLIFVNKCSFGCKVELEVLKGLMQSPQPMLLGLLGQFLVMPLYAFLMAKVFMLPKAL 225
+L+ ++F S GC +E +K + P+ + + L+ Q+ +MPL AF++ KVF L
Sbjct: 30 ILVFMLFFIMLSLGCTMEFSKIKAHLWKPKGLAIALVAQYGIMPLTAFVLGKVFRLKNIE 89
Query: 226 ALGLIITCSSPGGGGSYLFSLLLGGDVTLAISMTFLSTVAATGFLPLSSAIYSRLLSIHE 285
AL +++ SPGG S +FSL + GD+ L+I MT ST A G +PL IYSR + +
Sbjct: 90 ALAILVCGCSPGGNLSNVFSLAMKGDMNLSIVMTTCSTFCALGMMPLLLYIYSRGIYDGD 149
Query: 286 TL-HVPISKILGTLLFIAIPIAVGVLIKSKLPKFSQLLLQVVKPFSFVLLLGGLFL---- 340
VP I+ +L+ + IP +G+++KSK P Q + V+K ++LL + +
Sbjct: 150 LKDKVPYKGIVISLVLVLIPCTIGIVLKSKRP---QYMRYVIKGGMIIILLCSVAVTVLS 206
Query: 341 AYRMGVFILAGIRLPIVLVGITVPLVGLLVGYCLATCLKLPVAQRRTVSIEVGVQNSLLA 400
A +G I+ + ++ +P +G L+GY L+ L RRTVS+E G QN L
Sbjct: 207 AINVGKSIMFAMTPLLIATSSLMPFIGFLLGYVLSALFCLNGRCRRTVSMETGCQNVQLC 266
Query: 401 LAMLQLS 407
+L ++
Sbjct: 267 STILNVA 273
>gi|37537552 sodium-dependent organic anion transporter [Homo
sapiens]
Length = 377
Score = 129 bits (323), Expect = 7e-30
Identities = 82/234 (35%), Positives = 128/234 (54%), Gaps = 7/234 (2%)
Query: 177 SFGCKVELEVLKGLMQSPQPMLLGLLGQFLVMPLYAFLMAKVFMLPKALALGLIITCSSP 236
S GC VE+ L ++ P + +GLL QF +MP A+L+A F L A+ ++I P
Sbjct: 48 SLGCSVEIRKLWSHIRRPWGIAVGLLCQFGLMPFTAYLLAISFSLKPVQAIAVLIMGCCP 107
Query: 237 GGGGSYLFSLLLGGDVTLAISMTFLSTVAATGFLPLSSAIYSRLLSIHETLHVPISKILG 296
GG S +F+ + GD+ L+ISMT STVAA G +PL +Y+ S+ + L +P I
Sbjct: 108 GGTISNIFTFWVDGDMDLSISMTTCSTVAALGMMPLCIYLYTWSWSLQQNLTIPYQNIGI 167
Query: 297 TLLFIAIPIAVGVLIKSKLPKFSQLLLQVVKPFSFVLLLGGLFLAYRMGVFILAG---IR 353
TL+ + IP+A GV + + PK S+++L++ VLLL + GV + G
Sbjct: 168 TLVCLTIPVAFGVYVNYRWPKQSKIILKIGAVVGGVLLL----VVAVAGVVLAKGSWNSD 223
Query: 354 LPIVLVGITVPLVGLLVGYCLATCLKLPVAQRRTVSIEVGVQNSLLALAMLQLS 407
+ ++ + PL+G + G+ LA + RT+S+E G QN + + MLQLS
Sbjct: 224 ITLLTISFIFPLIGHVTGFLLALFTHQSWQRCRTISLETGAQNIQMCITMLQLS 277
>gi|4506973 solute carrier family 10 (sodium/bile acid cotransporter
family), member 2 [Homo sapiens]
Length = 348
Score = 120 bits (301), Expect = 2e-27
Identities = 79/281 (28%), Positives = 151/281 (53%), Gaps = 11/281 (3%)
Query: 163 ILYLLLPLIFVNKCSFGCKVELEVLKGLMQSPQPMLLGLLGQFLVMPLYAFLMAKVF-ML 221
+L +LL L+ S GC VE++ G ++ P + +G L QF +MPL F+++ F +L
Sbjct: 37 VLTILLALVMF---SMGCNVEIKKFLGHIKRPWGICVGFLCQFGIMPLTGFILSVAFDIL 93
Query: 222 PKALALGLIITCSSPGGGGSYLFSLLLGGDVTLAISMTFLSTVAATGFLPLSSAIYSRLL 281
P + LII C PGG S + + + GD+ L++SMT ST+ A G +PL IY+++
Sbjct: 94 PLQAVVVLIIGC-CPGGTASNILAYWVDGDMDLSVSMTTCSTLLALGMMPLCLLIYTKMW 152
Query: 282 SIHETLHVPISKILGTLLFIAIPIAVGVLIKSKLPKFSQLLLQVVKPFSFVLLLGGLFLA 341
++ +P I +L+ + +P+++G+ + K P+ ++++L++ +L+ + +A
Sbjct: 153 VDSGSIVIPYDNIGTSLVALVVPVSIGMFVNHKWPQKAKIILKIGSIAGAILI---VLIA 209
Query: 342 YRMGVFILAG--IRLPIVLVGITVPLVGLLVGYCLATCLKLPVAQRRTVSIEVGVQNSLL 399
G+ + I + ++G P+ G +G+ LA LP + RTV+ E G+QN+ L
Sbjct: 210 VVGGILYQSAWIIAPKLWIIGTIFPVAGYSLGFLLARIAGLPWYRCRTVAFETGMQNTQL 269
Query: 400 ALAMLQLSLRRLQADYASQAPFIVALSGTSEMLALVIGHFI 440
++QLS + + P I ++ + A+ +G ++
Sbjct: 270 CSTIVQLSFTPEELNVVFTFPLIYSIFQLA-FAAIFLGFYV 309
>gi|24308414 solute carrier family 10, member 4 [Homo sapiens]
Length = 437
Score = 120 bits (301), Expect = 2e-27
Identities = 88/274 (32%), Positives = 139/274 (50%), Gaps = 4/274 (1%)
Query: 173 VNKCSFGCKVELEVLKGLMQSPQPMLLGLLGQFLVMPLYAFLMAKVFMLPKALALGLIIT 232
+ GC V++ ++ P LL L QF ++PL AFL+A F L + A+ +++
Sbjct: 115 ITMLGLGCTVDVNHFGAHVRRPVGALLAALCQFGLLPLLAFLLALAFKLDEVAAVAVLLC 174
Query: 233 CSSPGGGGSYLFSLLLGGDVTLAISMTFLSTVAATGFLPLSSAIYS-RLLSIHETLHVPI 291
PGG S L SLL+ GD+ L+I MT ST+ A +PL IYS ++ +P+
Sbjct: 175 GCCPGGNLSNLMSLLVDGDMNLSIIMTISSTLLALVLMPLCLWIYSWAWINTPIVQLLPL 234
Query: 292 SKILGTLLFIAIPIAVGVLIKSKLPKFSQLLLQVVKPFSFVLLLGGLFL--AYRMGVFIL 349
+ TL IPI +GV I+ K + + +++ V +S ++ L LF+ +G +L
Sbjct: 235 GTVTLTLCSTLIPIGLGVFIRYKYSRVADYIVK-VSLWSLLVTLVVLFIMTGTMLGPELL 293
Query: 350 AGIRLPIVLVGITVPLVGLLVGYCLATCLKLPVAQRRTVSIEVGVQNSLLALAMLQLSLR 409
A I + ++ I +PL G GY LAT LP +RTV +E G QN L A+L+L+
Sbjct: 294 ASIPAAVYVIAIFMPLAGYASGYGLATLFHLPPNCKRTVCLETGSQNVQLCTAILKLAFP 353
Query: 410 RLQADYASQAPFIVALSGTSEMLALVIGHFIYSS 443
P + AL ++E V+ + +Y S
Sbjct: 354 PQFIGSMYMFPLLYALFQSAEAGIFVLIYKMYGS 387
>gi|74027251 tripartite motif-containing 33 protein isoform beta
[Homo sapiens]
Length = 1110
Score = 36.6 bits (83), Expect = 0.047
Identities = 43/162 (26%), Positives = 61/162 (37%), Gaps = 28/162 (17%)
Query: 3 LMQDKGSSQQWPGLGGEG------GGTGPLSM-----LRAALLLISLPWGAQGTASTSLS 51
+ ++KG + G GG G G GP + L A L+ G + A
Sbjct: 1 MAENKGGGEAESGGGGSGSAPVTAGAAGPAAQEAEPPLTAVLVEEEEEEGGRAGAE---- 56
Query: 52 TAGGHTVPPTGGRYLSIGDGSVMEFEFPEDSEGIIV----ISSQYPGQANRTAPGPMLR- 106
GG P GG + GS P S G V +S+ P A+ APGP
Sbjct: 57 --GGAAGPDDGG-VAAASSGSAQAASSPAASVGTGVAGGAVSTPAPAPASAPAPGPSAGP 113
Query: 107 -----VTSLDTEVLTIKNLVDAHEAPPTLIEERRDFCIKVSP 143
+ LDT + ++L EA P L+ FC++ P
Sbjct: 114 PPGPPASLLDTCAVCQQSLQSRREAEPKLLPCLHSFCLRCLP 155
>gi|74027249 tripartite motif-containing 33 protein isoform alpha
[Homo sapiens]
Length = 1127
Score = 36.6 bits (83), Expect = 0.047
Identities = 43/162 (26%), Positives = 61/162 (37%), Gaps = 28/162 (17%)
Query: 3 LMQDKGSSQQWPGLGGEG------GGTGPLSM-----LRAALLLISLPWGAQGTASTSLS 51
+ ++KG + G GG G G GP + L A L+ G + A
Sbjct: 1 MAENKGGGEAESGGGGSGSAPVTAGAAGPAAQEAEPPLTAVLVEEEEEEGGRAGAE---- 56
Query: 52 TAGGHTVPPTGGRYLSIGDGSVMEFEFPEDSEGIIV----ISSQYPGQANRTAPGPMLR- 106
GG P GG + GS P S G V +S+ P A+ APGP
Sbjct: 57 --GGAAGPDDGG-VAAASSGSAQAASSPAASVGTGVAGGAVSTPAPAPASAPAPGPSAGP 113
Query: 107 -----VTSLDTEVLTIKNLVDAHEAPPTLIEERRDFCIKVSP 143
+ LDT + ++L EA P L+ FC++ P
Sbjct: 114 PPGPPASLLDTCAVCQQSLQSRREAEPKLLPCLHSFCLRCLP 155
>gi|4507545 G protein-coupled receptor 137B [Homo sapiens]
Length = 399
Score = 35.0 bits (79), Expect = 0.14
Identities = 25/86 (29%), Positives = 40/86 (46%), Gaps = 1/86 (1%)
Query: 353 RLPIVLVGITVPLVGLLVGYCLATCLKLPVAQRRT-VSIEVGVQNSLLALAMLQLSLRRL 411
RLP+ L + + LV LLV A +K +R+ VS+ V + ++L L + LS+
Sbjct: 155 RLPLYLASLFISLVFLLVNLTCAVLVKTGNWERKVIVSVRVAINDTLFVLCAVSLSICLY 214
Query: 412 QADYASQAPFIVALSGTSEMLALVIG 437
+ S A + G+S IG
Sbjct: 215 KISKMSLANIYLESKGSSVCQVTAIG 240
>gi|53933282 olfactory receptor, family 6, subfamily C, member 65
[Homo sapiens]
Length = 312
Score = 32.3 bits (72), Expect = 0.89
Identities = 43/162 (26%), Positives = 68/162 (41%), Gaps = 40/162 (24%)
Query: 250 GDVTLAISMT-----FLSTVAATGFLPLSSAIYSRLLSIHETLH------------VPIS 292
GD T++ + + FL + +T F L+ Y R ++I + LH + IS
Sbjct: 86 GDTTISYNASMAQVFFLILLGSTEFFLLAVMSYDRYVAICKPLHYTTIMSNKVCNWLVIS 145
Query: 293 KILGTLLFIAIPIAVGVLI----KSKLPKF----SQLLLQVVKPFSFVLLLGGLFLAYRM 344
L L I P+ +G+ + S + F S +LL F+ L+ A+ +
Sbjct: 146 SWLAGFLIIFPPVIMGLQLDFCDSSTIDHFICDSSPMLLIACTDTQFLELM-----AFLL 200
Query: 345 GVFILAGIRLPIVLVGITVPLVGLLVGYCLATCLKLPVAQRR 386
VF L +T+ LV L L T LK+P AQ+R
Sbjct: 201 AVFTLM----------VTLALVVLSYTLILKTILKIPSAQQR 232
>gi|52317150 olfactory receptor, family 51, subfamily D, member 1
[Homo sapiens]
Length = 324
Score = 32.0 bits (71), Expect = 1.2
Identities = 31/131 (23%), Positives = 55/131 (41%), Gaps = 27/131 (20%)
Query: 254 LAISMTFLSTVAATGFLPLSSAIYSRLLSIHETLHVPISKILGTLLFIAIPIAVGVLIKS 313
LA + F+ +A G L + ++ + LH P+ LF+A+ + +++ S
Sbjct: 40 LAFPLCFMYALATLGNLTIVL-----IIRVERRLHEPM------YLFLAMLSTIDLVLSS 88
Query: 314 -KLPKFSQLLLQVVKPFSFVLLLGGLFLAYRMG---------------VFILAGIRLPIV 357
+PK + L L ++ F + L +FL + + V I +R V
Sbjct: 89 ITMPKMASLFLMGIQEIEFNICLAQMFLIHALSAVESAVLLAMAFDRFVAICHPLRHASV 148
Query: 358 LVGITVPLVGL 368
L G TV +GL
Sbjct: 149 LTGCTVAKIGL 159
>gi|53828708 olfactory receptor, family 6, subfamily C, member 4
[Homo sapiens]
Length = 309
Score = 32.0 bits (71), Expect = 1.2
Identities = 50/202 (24%), Positives = 82/202 (40%), Gaps = 27/202 (13%)
Query: 199 LGLLGQFLVMPLYAFLMAKVFMLPKALALGLIITCSSPGGGGSYLFSLLLGGDVTLAISM 258
L LL L P+Y FL F+ ++ + +S G + G +T
Sbjct: 46 LTLLDPHLQTPMYFFLRNFSFLEISFTSIFIPRFLTSMTTGNKVIS---FAGCLTQYFFA 102
Query: 259 TFLSTVAATGFLPLSSAIYSRLLSIHETLHVPISKILGTLLFIAIPIAVGVLIKSKLPKF 318
FL AT F L+S Y R ++I + LH L ++ + + ++ S L F
Sbjct: 103 IFLG---ATEFYLLASMSYDRYVAICKPLHY--------LTIMSSRVCIQLVFCSWLGGF 151
Query: 319 SQLLLQVVK----PFSFVLLLGGLFLAYRMGVFI---------LAGIRLPIVLVGITVPL 365
+L ++ F +L + Y V + L I L +V + +T+ L
Sbjct: 152 LAILPPIILMTQVDFCVSNILNHYYCDYGPLVELACSDTSLLELMVILLAVVTLMVTLVL 211
Query: 366 VGLLVGYCLATCLKLPVAQRRT 387
V L Y + T L++P AQ+RT
Sbjct: 212 VTLSYTYIIRTILRIPSAQQRT 233
>gi|53933290 olfactory receptor, family 6, subfamily C, member 68
[Homo sapiens]
Length = 317
Score = 31.6 bits (70), Expect = 1.5
Identities = 48/209 (22%), Positives = 83/209 (39%), Gaps = 43/209 (20%)
Query: 199 LGLLGQFLVMPLYAFLMAKVFMLPKALALGLIITCSSPGGGGSYLFSLLLGGDV----TL 254
L +L L P+Y FL F L + TC +L+S+ G +
Sbjct: 51 LTMLDPHLKTPMYFFLQNLSF-----LEISFTATCVP-----RFLYSISTGNKIITYNAC 100
Query: 255 AISMTFLSTVAATGFLPLSSAIYSRLLSIHETLH---VPISKI---------LGTLLFIA 302
I + F T F L++ Y R ++I + LH + +K+ + L+ I
Sbjct: 101 VIQLFFADLFGVTEFFLLATMSYDRYVAICKPLHYMAIMSNKVCKTMVICCWMAALMIIL 160
Query: 303 IPIAVGVLIK----SKLPKFSQLLLQVVK-PFSFVLLLGGLFLAYRMGVFILAGIRLPIV 357
P+++G ++ + + F L ++K P S L+ + +A + FI
Sbjct: 161 PPLSLGFHLEFCDSNVINHFGCDALPILKIPCSDTSLIEQMVVASAVLTFI--------- 211
Query: 358 LVGITVPLVGLLVGYCLATCLKLPVAQRR 386
IT+ V L Y + T LK P Q++
Sbjct: 212 ---ITLVCVVLSYTYIIRTILKFPSVQQK 237
>gi|56550049 uromodulin precursor [Homo sapiens]
Length = 640
Score = 31.2 bits (69), Expect = 2.0
Identities = 37/135 (27%), Positives = 63/135 (46%), Gaps = 11/135 (8%)
Query: 133 ERRDFCIKVSPAEDTPA--TLSADLAHFSENPILYLLLPLIFVN---KCSFGCKVELEVL 187
+ RD+ V+PA D P L+ + H + + LYL +I + K +F C L++
Sbjct: 373 DNRDWVSVVTPARDGPCGTVLTRNETHATYSNTLYLADEIIIRDLNIKINFACSYPLDMK 432
Query: 188 KGLMQSPQPMLLGLLGQFLVMPLYAFLMAKVFMLPKALA--LGLIITCSSPGGGGSYLFS 245
L + QPM+ L + ++ MA +F P G +T S+ Y+ +
Sbjct: 433 VSLKTALQPMVSALNIRVGGTGMFTVRMA-LFQTPSYTQPYQGSSVTLSTE--AFLYVGT 489
Query: 246 LLLGGDVT-LAISMT 259
+L GGD++ A+ MT
Sbjct: 490 MLDGGDLSRFALLMT 504
>gi|59850812 uromodulin precursor [Homo sapiens]
Length = 640
Score = 31.2 bits (69), Expect = 2.0
Identities = 37/135 (27%), Positives = 63/135 (46%), Gaps = 11/135 (8%)
Query: 133 ERRDFCIKVSPAEDTPA--TLSADLAHFSENPILYLLLPLIFVN---KCSFGCKVELEVL 187
+ RD+ V+PA D P L+ + H + + LYL +I + K +F C L++
Sbjct: 373 DNRDWVSVVTPARDGPCGTVLTRNETHATYSNTLYLADEIIIRDLNIKINFACSYPLDMK 432
Query: 188 KGLMQSPQPMLLGLLGQFLVMPLYAFLMAKVFMLPKALA--LGLIITCSSPGGGGSYLFS 245
L + QPM+ L + ++ MA +F P G +T S+ Y+ +
Sbjct: 433 VSLKTALQPMVSALNIRVGGTGMFTVRMA-LFQTPSYTQPYQGSSVTLSTE--AFLYVGT 489
Query: 246 LLLGGDVT-LAISMT 259
+L GGD++ A+ MT
Sbjct: 490 MLDGGDLSRFALLMT 504
>gi|211971072 FERM and PDZ domain containing 4 [Homo sapiens]
Length = 1322
Score = 29.6 bits (65), Expect = 5.8
Identities = 34/131 (25%), Positives = 53/131 (40%), Gaps = 15/131 (11%)
Query: 34 LLISLPWGAQGTASTSLSTAGGHTVPPTGGRYLSIGDGSVMEFEFPEDSEGIIVISSQYP 93
L+ ++P A+G L A V T G ++ SV E + D+ G+ ++ + P
Sbjct: 849 LIDAVPTSAEGKCEKGLDNA----VVSTLGALEAL---SVSEEQQTSDNSGVAILRAYSP 901
Query: 94 GQA----NRTAPGPMLRVTSLDTEVLTIKNL----VDAHEAPPTLIEERRDFCIKVSPAE 145
+ N T M + L T +NL + HE L EE+ +F +PA
Sbjct: 902 ESSSDSGNETNSSEMTESSELATAQKQSENLSRMFLATHEGYHPLAEEQTEFPASKTPAG 961
Query: 146 DTPATLSADLA 156
P S LA
Sbjct: 962 GLPPKSSHALA 972
>gi|30581164 neuropeptides B/W receptor 2 [Homo sapiens]
Length = 333
Score = 29.6 bits (65), Expect = 5.8
Identities = 18/69 (26%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Query: 128 PTLIEERRDFCIKVSPAEDTPATLSADLAHFSEN-PILYLLLPLIFVNKCSFGCKVELEV 186
P ++ R F + A + + A FSE P LY+LLP ++ C+ G V
Sbjct: 7 PEPLDSRGSFSLPTMGANVSQDNGTGHNATFSEPLPFLYVLLPAVYSGICAVGLTGNTAV 66
Query: 187 LKGLMQSPQ 195
+ ++++P+
Sbjct: 67 ILVILRAPK 75
>gi|229892345 GLI family zinc finger 1 isoform 2 [Homo sapiens]
Length = 978
Score = 29.3 bits (64), Expect = 7.6
Identities = 14/49 (28%), Positives = 25/49 (51%)
Query: 35 LISLPWGAQGTASTSLSTAGGHTVPPTGGRYLSIGDGSVMEFEFPEDSE 83
++ P G S + GHT PP+G +++G+ SV+ P ++E
Sbjct: 924 ILDEPQGLSPPPSHDQRGSSGHTPPPSGPPNMAVGNMSVLLRSLPGETE 972
>gi|4885279 GLI family zinc finger 1 isoform 1 [Homo sapiens]
Length = 1106
Score = 29.3 bits (64), Expect = 7.6
Identities = 14/49 (28%), Positives = 25/49 (51%)
Query: 35 LISLPWGAQGTASTSLSTAGGHTVPPTGGRYLSIGDGSVMEFEFPEDSE 83
++ P G S + GHT PP+G +++G+ SV+ P ++E
Sbjct: 1052 ILDEPQGLSPPPSHDQRGSSGHTPPPSGPPNMAVGNMSVLLRSLPGETE 1100
>gi|239756458 PREDICTED: similar to ZNF668 protein [Homo sapiens]
Length = 377
Score = 29.3 bits (64), Expect = 7.6
Identities = 17/38 (44%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Query: 201 LLGQFLVMP-LYAFLMAKVFMLPKALALGLIITCSSPG 237
+LG+FL ++ F K F LP+ L LGL C SPG
Sbjct: 298 MLGRFLFPGGIFHFHNQKPFSLPRGLVLGLQGGCHSPG 335
>gi|239750986 PREDICTED: hypothetical protein XP_002347637 [Homo
sapiens]
Length = 377
Score = 29.3 bits (64), Expect = 7.6
Identities = 17/38 (44%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Query: 201 LLGQFLVMP-LYAFLMAKVFMLPKALALGLIITCSSPG 237
+LG+FL ++ F K F LP+ L LGL C SPG
Sbjct: 298 MLGRFLFPGGIFHFHNQKPFSLPRGLVLGLQGGCHSPG 335
>gi|239745391 PREDICTED: hypothetical protein XP_002343487 [Homo
sapiens]
Length = 417
Score = 29.3 bits (64), Expect = 7.6
Identities = 17/38 (44%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Query: 201 LLGQFLVMP-LYAFLMAKVFMLPKALALGLIITCSSPG 237
+LG+FL ++ F K F LP+ L LGL C SPG
Sbjct: 338 MLGRFLFPGGIFHFHNQKPFSLPRGLVLGLQGGCHSPG 375
>gi|111955162 5-azacytidine induced 1 isoform b [Homo sapiens]
Length = 1044
Score = 29.3 bits (64), Expect = 7.6
Identities = 29/122 (23%), Positives = 51/122 (41%), Gaps = 7/122 (5%)
Query: 59 PPTGGRYLSIGD-GSVMEFEFPEDSEGIIVISSQYPGQANRTAPGPMLRVTSLDTEVLTI 117
PP G LS S+M F + G + SQ G PGP+ + + T V+ +
Sbjct: 514 PPEDGTLLSEAKLQSIMSFLDEMEKSGQDQLDSQQEGWVPEAGPGPLELGSEVSTSVMRL 573
Query: 118 KNLVDAHEAPPTLIE----ERRDFCIKVSPAEDTPATLSADLAHFSENPILYLLLPLIFV 173
K V+ + L++ ++RD + ++T LS L E+ + L F+
Sbjct: 574 KLEVEEKKQAMLLLQRALAQQRD--LTARRVKETEKALSRQLQRQREHYEATIQRHLAFI 631
Query: 174 NK 175
++
Sbjct: 632 DQ 633
>gi|111955084 5-azacytidine induced 1 isoform a [Homo sapiens]
Length = 1080
Score = 29.3 bits (64), Expect = 7.6
Identities = 29/122 (23%), Positives = 51/122 (41%), Gaps = 7/122 (5%)
Query: 59 PPTGGRYLSIGD-GSVMEFEFPEDSEGIIVISSQYPGQANRTAPGPMLRVTSLDTEVLTI 117
PP G LS S+M F + G + SQ G PGP+ + + T V+ +
Sbjct: 514 PPEDGTLLSEAKLQSIMSFLDEMEKSGQDQLDSQQEGWVPEAGPGPLELGSEVSTSVMRL 573
Query: 118 KNLVDAHEAPPTLIE----ERRDFCIKVSPAEDTPATLSADLAHFSENPILYLLLPLIFV 173
K V+ + L++ ++RD + ++T LS L E+ + L F+
Sbjct: 574 KLEVEEKKQAMLLLQRALAQQRD--LTARRVKETEKALSRQLQRQREHYEATIQRHLAFI 631
Query: 174 NK 175
++
Sbjct: 632 DQ 633
>gi|31083156 interleukin 20 receptor, alpha [Homo sapiens]
Length = 553
Score = 28.9 bits (63), Expect = 9.9
Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 6/63 (9%)
Query: 25 PLSMLRAALLLISLPWGAQGTASTSLSTAGGHTVPPTGGRYLSIGDGSVMEFEFPEDSEG 84
PL + LLL++ PWG ++ G P +LSI +V+++ PE +G
Sbjct: 11 PLPLPPLLLLLLAAPWG------RAVPCVSGGLPKPANITFLSINMKNVLQWTPPEGLQG 64
Query: 85 IIV 87
+ V
Sbjct: 65 VKV 67
>gi|4826998 splicing factor proline/glutamine rich (polypyrimidine
tract binding protein associated) [Homo sapiens]
Length = 707
Score = 28.9 bits (63), Expect = 9.9
Identities = 18/53 (33%), Positives = 21/53 (39%), Gaps = 14/53 (26%)
Query: 11 QQWPGLGGEGGGTGPLSMLRAALLLISLPWGAQGTASTSLSTAGGHTVPPTGG 63
+Q PG GG GG +P G + LST GGH PP G
Sbjct: 199 KQGPGPGGPKGG--------------KMPGGPKPGGGPGLSTPGGHPKPPHRG 237
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.324 0.141 0.411
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,655,980
Number of Sequences: 37866
Number of extensions: 759144
Number of successful extensions: 2133
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 2102
Number of HSP's gapped (non-prelim): 38
length of query: 448
length of database: 18,247,518
effective HSP length: 106
effective length of query: 342
effective length of database: 14,233,722
effective search space: 4867932924
effective search space used: 4867932924
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.