Guide to the Human Genome
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Name: OR6C4 Sequence: fasta or formatted (309aa) NCBI GI: 53828708
Description:

olfactory receptor, family 6, subfamily C, member 4

Referenced in:

Olfactory Receptors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.5         14           1
 C cysteine            2.9          9           1
 D aspartate           1.9          6           1
 E glutamate           2.3          7           1
 F phenylalanine       8.1         25           2
 G glycine             4.2         13           2
 H histidine           1.3          4           1
 I isoleucine          9.7         30           2
 K lysine              3.6         11           2
 L leucine            14.9         46           2
 M methionine          4.5         14           1
 N asparagine          3.6         11           1
 P proline             3.9         12           2
 Q glutamine           3.6         11           2
 R arginine            2.9          9           1
 S serine              8.1         25           2
 T threonine           8.4         26           2
 V valine              6.5         20           2
 W tryptophan          0.3          1           1
 Y tyrosine            4.9         15           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   olfactory receptor, family 6, subfamily C, member 4 ... 
OR6C74                0.715   olfactory receptor, family 6, subfamily C, member 74...
OR6C76                0.703   olfactory receptor, family 6, subfamily C, member 76...
OR6C3                 0.701   olfactory receptor, family 6, subfamily C, member 3 ...
OR6C75                0.697   olfactory receptor, family 6, subfamily C, member 75...
OR6C2                 0.685   olfactory receptor, family 6, subfamily C, member 2 ...
OR6C1                 0.665   olfactory receptor, family 6, subfamily C, member 1 ...
OR6C65                0.665   olfactory receptor, family 6, subfamily C, member 65...
OR6C68                0.656   olfactory receptor, family 6, subfamily C, member 68...
OR6C6                 0.656   olfactory receptor, family 6, subfamily C, member 6 ...
OR6C70                0.653   olfactory receptor, family 6, subfamily C, member 70...
OR6M1                 0.475   olfactory receptor, family 6, subfamily M, member 1 ...
OR6X1                 0.463   olfactory receptor, family 6, subfamily X, member 1 ...
OR6T1                 0.455   olfactory receptor, family 6, subfamily T, member 1 ...
OR6S1                 0.446   olfactory receptor, family 6, subfamily S, member 1 ...
OR10A7                0.436   olfactory receptor, family 10, subfamily A, member 7...
OR6F1                 0.434   olfactory receptor, family 6, subfamily F, member 1 ...
OR2C3                 0.431   olfactory receptor, family 2, subfamily C, member 3...
OR6V1                 0.427   olfactory receptor, family 6, subfamily V, member 1 ...
OR5AR1                0.424   olfactory receptor, family 5, subfamily AR, member 1...
OR11H6                0.421   olfactory receptor, family 11, subfamily H, member 6...
OR8B3                 0.419   olfactory receptor, family 8, subfamily B, member 3 ...
OR5A2                 0.417   olfactory receptor, family 5, subfamily A, member 2 ...
OR10C1                0.415   olfactory receptor, family 10, subfamily C, member 1...
OR2G3                 0.415   olfactory receptor, family 2, subfamily G, member 3 ...
OR2D3                 0.415   olfactory receptor, family 2, subfamily D, member 3 ...
OR6N1                 0.414   olfactory receptor, family 6, subfamily N, member 1 ...
OR13F1                0.412   olfactory receptor, family 13, subfamily F, member 1...
OR10A5                0.412   olfactory receptor, family 10, subfamily A, member 5...
OR8H1                 0.410   olfactory receptor, family 8, subfamily H, member 1 ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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