Search of human proteins with 21536344

Search of human proteins with 21536344

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|21536344 T-cell leukemia/lymphoma 6 isoform TCL6c1 [Homo
sapiens]
         (119 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|21536344 T-cell leukemia/lymphoma 6 isoform TCL6c1 [Homo sapi...   259   3e-70
gi|21536342 T-cell leukemia/lymphoma 6 isoform TCL6b1 [Homo sapi...   223   3e-59
gi|21536346 T-cell leukemia/lymphoma 6 isoform TCL6d1 [Homo sapi...   221   1e-58
gi|11140823 X-linked ectodysplasin receptor [Homo sapiens]             31   0.19 
gi|6631100 natural killer-tumor recognition sequence [Homo sapiens]    31   0.25 
gi|239753102 PREDICTED: hypothetical protein [Homo sapiens]            28   2.1  
gi|225543116 solute carrier organic anion transporter family, me...    27   2.7  
gi|8394291 solute carrier organic anion transporter family, memb...    27   2.7  
gi|224548936 hypothetical protein LOC100170229 [Homo sapiens]          27   2.7  
gi|122937293 tubulin tyrosine ligase-like family, member 8 [Homo...    27   3.6  
gi|4507347 TBP-associated factor 2 [Homo sapiens]                      27   4.7  
gi|66528677 nuclear receptor subfamily 3, group C, member 1 isof...    26   6.1  
gi|23943787 dermatan sulfate epimerase-like [Homo sapiens]             26   6.1  
gi|76096366 phospholipase B1 [Homo sapiens]                            26   6.1  
gi|113206030 mucin 1 isoform 8 precursor [Homo sapiens]                26   7.9  
gi|239756098 PREDICTED: hypothetical protein [Homo sapiens]            26   7.9  
gi|239751241 PREDICTED: TBC1 domain family, member 27 [Homo sapi...    26   7.9  
gi|239750629 PREDICTED: hypothetical protein XP_002347479 [Homo ...    26   7.9  
gi|239744936 PREDICTED: hypothetical protein XP_002343312 [Homo ...    26   7.9  
gi|4505853 phospholipase A2, group V precursor [Homo sapiens]          26   7.9  
gi|126116589 fibrocystin L [Homo sapiens]                              26   7.9  

>gi|21536344 T-cell leukemia/lymphoma 6 isoform TCL6c1 [Homo
           sapiens]
          Length = 119

 Score =  259 bits (663), Expect = 3e-70
 Identities = 119/119 (100%), Positives = 119/119 (100%)

Query: 1   MEHLLCAYISYALSLIIKRRLEARHKSYLHSRRGDHAKDKLQRDNRFTSQTHSHWAKSSC 60
           MEHLLCAYISYALSLIIKRRLEARHKSYLHSRRGDHAKDKLQRDNRFTSQTHSHWAKSSC
Sbjct: 1   MEHLLCAYISYALSLIIKRRLEARHKSYLHSRRGDHAKDKLQRDNRFTSQTHSHWAKSSC 60

Query: 61  HCRFESRPFFLPSPSWSYNRSWGGESAERTWMKQRGTCLSHSPLDLLHPGLCQHKVGAR 119
           HCRFESRPFFLPSPSWSYNRSWGGESAERTWMKQRGTCLSHSPLDLLHPGLCQHKVGAR
Sbjct: 61  HCRFESRPFFLPSPSWSYNRSWGGESAERTWMKQRGTCLSHSPLDLLHPGLCQHKVGAR 119


>gi|21536342 T-cell leukemia/lymphoma 6 isoform TCL6b1 [Homo
           sapiens]
          Length = 105

 Score =  223 bits (568), Expect = 3e-59
 Identities = 100/100 (100%), Positives = 100/100 (100%)

Query: 20  RLEARHKSYLHSRRGDHAKDKLQRDNRFTSQTHSHWAKSSCHCRFESRPFFLPSPSWSYN 79
           RLEARHKSYLHSRRGDHAKDKLQRDNRFTSQTHSHWAKSSCHCRFESRPFFLPSPSWSYN
Sbjct: 6   RLEARHKSYLHSRRGDHAKDKLQRDNRFTSQTHSHWAKSSCHCRFESRPFFLPSPSWSYN 65

Query: 80  RSWGGESAERTWMKQRGTCLSHSPLDLLHPGLCQHKVGAR 119
           RSWGGESAERTWMKQRGTCLSHSPLDLLHPGLCQHKVGAR
Sbjct: 66  RSWGGESAERTWMKQRGTCLSHSPLDLLHPGLCQHKVGAR 105


>gi|21536346 T-cell leukemia/lymphoma 6 isoform TCL6d1 [Homo
           sapiens]
          Length = 163

 Score =  221 bits (563), Expect = 1e-58
 Identities = 99/99 (100%), Positives = 99/99 (100%)

Query: 21  LEARHKSYLHSRRGDHAKDKLQRDNRFTSQTHSHWAKSSCHCRFESRPFFLPSPSWSYNR 80
           LEARHKSYLHSRRGDHAKDKLQRDNRFTSQTHSHWAKSSCHCRFESRPFFLPSPSWSYNR
Sbjct: 65  LEARHKSYLHSRRGDHAKDKLQRDNRFTSQTHSHWAKSSCHCRFESRPFFLPSPSWSYNR 124

Query: 81  SWGGESAERTWMKQRGTCLSHSPLDLLHPGLCQHKVGAR 119
           SWGGESAERTWMKQRGTCLSHSPLDLLHPGLCQHKVGAR
Sbjct: 125 SWGGESAERTWMKQRGTCLSHSPLDLLHPGLCQHKVGAR 163


>gi|11140823 X-linked ectodysplasin receptor [Homo sapiens]
          Length = 297

 Score = 31.2 bits (69), Expect = 0.19
 Identities = 15/43 (34%), Positives = 21/43 (48%)

Query: 48  TSQTHSHWAKSSCHCRFESRPFFLPSPSWSYNRSWGGESAERT 90
           TS++HSHW  S   C       F  S S++   + GG + E T
Sbjct: 240 TSESHSHWVHSPIECTELDLQKFSSSASYTGAETLGGNTVEST 282


>gi|6631100 natural killer-tumor recognition sequence [Homo sapiens]
          Length = 1462

 Score = 30.8 bits (68), Expect = 0.25
 Identities = 17/59 (28%), Positives = 26/59 (44%), Gaps = 5/59 (8%)

Query: 36  HAKDKLQRDNRFTSQTHSHWAKSS-----CHCRFESRPFFLPSPSWSYNRSWGGESAER 89
           H K+++QR   +   +   W+K       C  R++ R     S SWSYN  +   S  R
Sbjct: 364 HWKEEMQRLRAYRPPSGEKWSKGDKLSDPCSSRWDERSLSQRSRSWSYNGYYSDLSTAR 422


>gi|239753102 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 252

 Score = 27.7 bits (60), Expect = 2.1
 Identities = 14/40 (35%), Positives = 16/40 (40%), Gaps = 1/40 (2%)

Query: 74  PSWSYNRSWGGESAERTWMKQRGTCLSHSPLDLLHPGLCQ 113
           PSW   R WGG    R     R      +    +H GLCQ
Sbjct: 163 PSWGA-RGWGGSEETRWGGDPRSQTPGETAFPAVHSGLCQ 201


>gi|225543116 solute carrier organic anion transporter family,
           member 1C1 isoform 3 [Homo sapiens]
          Length = 663

 Score = 27.3 bits (59), Expect = 2.7
 Identities = 11/41 (26%), Positives = 23/41 (56%)

Query: 9   ISYALSLIIKRRLEARHKSYLHSRRGDHAKDKLQRDNRFTS 49
           +S A+  I+K+   ++H+S++  R       + Q++N  TS
Sbjct: 607 LSIAVLFILKKNYVSKHRSFITKRERTMVSTRFQKENYTTS 647


>gi|8394291 solute carrier organic anion transporter family, member
           1C1 isoform 2 [Homo sapiens]
          Length = 712

 Score = 27.3 bits (59), Expect = 2.7
 Identities = 11/41 (26%), Positives = 23/41 (56%)

Query: 9   ISYALSLIIKRRLEARHKSYLHSRRGDHAKDKLQRDNRFTS 49
           +S A+  I+K+   ++H+S++  R       + Q++N  TS
Sbjct: 656 LSIAVLFILKKNYVSKHRSFITKRERTMVSTRFQKENYTTS 696


>gi|224548936 hypothetical protein LOC100170229 [Homo sapiens]
          Length = 715

 Score = 27.3 bits (59), Expect = 2.7
 Identities = 24/75 (32%), Positives = 33/75 (44%), Gaps = 9/75 (12%)

Query: 30  HSRRGDHAKDKLQRDNRFTSQTHSH-WAKSSCHCRFESRPFFLPSPSWSYNRSWGGESAE 88
           HS+   H+K K Q  +R   +  SH W+++    R  S      S S S  R   G S+ 
Sbjct: 329 HSQSRSHSKGKSQNQSRTPRRGRSHNWSRNPSKERSHSH-----SRSSSKERDHRGSSSP 383

Query: 89  RTWMKQRGTCLSHSP 103
           R   K+ G   S SP
Sbjct: 384 R---KESGRSQSGSP 395


>gi|122937293 tubulin tyrosine ligase-like family, member 8 [Homo
           sapiens]
          Length = 834

 Score = 26.9 bits (58), Expect = 3.6
 Identities = 17/58 (29%), Positives = 25/58 (43%), Gaps = 5/58 (8%)

Query: 37  AKDKLQRDNRFTSQTHSHWAKSSCHCRFESRPFFL-----PSPSWSYNRSWGGESAER 89
           A   L RDN++  Q +       C  +F+ R +FL     P   W Y  S+   S +R
Sbjct: 363 ADHPLSRDNKWVVQKYIETPLLICDTKFDIRQWFLVTDWNPLTIWFYKESYLRFSTQR 420


>gi|4507347 TBP-associated factor 2 [Homo sapiens]
          Length = 1199

 Score = 26.6 bits (57), Expect = 4.7
 Identities = 16/66 (24%), Positives = 27/66 (40%), Gaps = 6/66 (9%)

Query: 10   SYALSLIIKRRLEARHKSYLHSRRGDHAKDKLQRDNRFTSQTHSHWAKSSCHCRFESRPF 69
            S  LS+  K    ++H  + H    +H K K +  ++     H H +K       +  PF
Sbjct: 1128 SAPLSVFTKESTASKHSDHHHHHHHEHKKKKKKHKHKH-KHKHKHDSKEK-----DKEPF 1181

Query: 70   FLPSPS 75
               SP+
Sbjct: 1182 TFSSPA 1187


>gi|66528677 nuclear receptor subfamily 3, group C, member 1 isoform
           gamma [Homo sapiens]
          Length = 778

 Score = 26.2 bits (56), Expect = 6.1
 Identities = 12/31 (38%), Positives = 18/31 (58%)

Query: 15  LIIKRRLEARHKSYLHSRRGDHAKDKLQRDN 45
           +  KR +E R  +YL + R D   DK++R N
Sbjct: 443 VFFKRAVEGRQHNYLCAGRNDCIIDKIRRKN 473


>gi|23943787 dermatan sulfate epimerase-like [Homo sapiens]
          Length = 1222

 Score = 26.2 bits (56), Expect = 6.1
 Identities = 12/28 (42%), Positives = 15/28 (53%), Gaps = 1/28 (3%)

Query: 70  FLPSPSWSYNRSWGGESAE-RTWMKQRG 96
           F PSPS   N+ W G+  E   W+K  G
Sbjct: 513 FAPSPSSQCNKPWEGQLGECAQWLKWTG 540


>gi|76096366 phospholipase B1 [Homo sapiens]
          Length = 1458

 Score = 26.2 bits (56), Expect = 6.1
 Identities = 14/57 (24%), Positives = 20/57 (35%), Gaps = 3/57 (5%)

Query: 50  QTHSHW---AKSSCHCRFESRPFFLPSPSWSYNRSWGGESAERTWMKQRGTCLSHSP 103
           Q H  W   A   C+C  E+         WSY  +W    A   + +Q    +   P
Sbjct: 226 QYHGTWLSPAPEPCNCSEETTRLAKVVMQWSYQEAWNSLLASSRYSEQESFTVVFQP 282


>gi|113206030 mucin 1 isoform 8 precursor [Homo sapiens]
          Length = 158

 Score = 25.8 bits (55), Expect = 7.9
 Identities = 16/47 (34%), Positives = 18/47 (38%), Gaps = 5/47 (10%)

Query: 60  CHCRFESRPFFLPSPSWSYNRSWGGESAERT-----WMKQRGTCLSH 101
           C CRF ++  F  SP  S    WG     R           G CLSH
Sbjct: 70  CFCRFINKGVFWASPILSSVWGWGARLGHRAAGAGLCSGCAGHCLSH 116


>gi|239756098 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 260

 Score = 25.8 bits (55), Expect = 7.9
 Identities = 17/44 (38%), Positives = 19/44 (43%), Gaps = 9/44 (20%)

Query: 55  WAKSSCHCRFESRPFFLPSPSWSYNRSWGGESAERTWMKQRGTC 98
           W  SS      SR FF PS   S   SWG  +A   W   R +C
Sbjct: 155 WRSSS------SRSFFSPSRGPSMAHSWGRSAA---WNMARTSC 189


>gi|239751241 PREDICTED: TBC1 domain family, member 27 [Homo
           sapiens]
          Length = 617

 Score = 25.8 bits (55), Expect = 7.9
 Identities = 21/68 (30%), Positives = 28/68 (41%), Gaps = 9/68 (13%)

Query: 48  TSQTHSHWAKSSCHCRFESRPFFLPSPSWSYNRSWGGESAE--RTWMKQRGTCLS-HSPL 104
           T     H  K+   CR + +PF LP   W    S G   AE  + W +      S +SP 
Sbjct: 57  TKYEQDHRVKTGSPCRQDPKPFTLPLSPWP---SLGHRDAELGQQWTQSMSVLTSGNSP- 112

Query: 105 DLLHPGLC 112
             +  GLC
Sbjct: 113 --VVSGLC 118


>gi|239750629 PREDICTED: hypothetical protein XP_002347479 [Homo
           sapiens]
          Length = 271

 Score = 25.8 bits (55), Expect = 7.9
 Identities = 17/44 (38%), Positives = 19/44 (43%), Gaps = 9/44 (20%)

Query: 55  WAKSSCHCRFESRPFFLPSPSWSYNRSWGGESAERTWMKQRGTC 98
           W  SS      SR FF PS   S   SWG  +A   W   R +C
Sbjct: 166 WRSSS------SRSFFSPSRGPSMAHSWGRSAA---WNMARTSC 200


>gi|239744936 PREDICTED: hypothetical protein XP_002343312 [Homo
           sapiens]
          Length = 271

 Score = 25.8 bits (55), Expect = 7.9
 Identities = 17/44 (38%), Positives = 19/44 (43%), Gaps = 9/44 (20%)

Query: 55  WAKSSCHCRFESRPFFLPSPSWSYNRSWGGESAERTWMKQRGTC 98
           W  SS      SR FF PS   S   SWG  +A   W   R +C
Sbjct: 166 WRSSS------SRSFFSPSRGPSMAHSWGRSAA---WNMARTSC 200


>gi|4505853 phospholipase A2, group V precursor [Homo sapiens]
          Length = 138

 Score = 25.8 bits (55), Expect = 7.9
 Identities = 10/34 (29%), Positives = 17/34 (50%)

Query: 55 WAKSSCHCRFESRPFFLPSPSWSYNRSWGGESAE 88
          WA   C+ R E +   + + S+ Y  +WG  + E
Sbjct: 65 WAHDHCYGRLEEKGCNIRTQSYKYRFAWGVVTCE 98


>gi|126116589 fibrocystin L [Homo sapiens]
          Length = 4243

 Score = 25.8 bits (55), Expect = 7.9
 Identities = 16/43 (37%), Positives = 19/43 (44%), Gaps = 5/43 (11%)

Query: 49   SQTHSHWAKSSCHCRFES-----RPFFLPSPSWSYNRSWGGES 86
            + T S WA    H R           FL   +WS N SWGG+S
Sbjct: 2148 AHTLSGWAPVCVHIRGVGMAKLDNADFLYVDAWSSNFSWGGKS 2190


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.323    0.133    0.449 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,375,533
Number of Sequences: 37866
Number of extensions: 236178
Number of successful extensions: 704
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 695
Number of HSP's gapped (non-prelim): 22
length of query: 119
length of database: 18,247,518
effective HSP length: 88
effective length of query: 31
effective length of database: 14,915,310
effective search space: 462374610
effective search space used: 462374610
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.