Guide to the Human Genome
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Name: PLB1 Sequence: fasta or formatted (1458aa) NCBI GI: 76096366
Description:

phospholipase B1

Referenced in:

Lipid Metabolism

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.4         94           2
 C cysteine            2.3         33           1
 D aspartate           5.7         83           2
 E glutamate           5.9         86           2
 F phenylalanine       4.3         62           2
 G glycine             6.0         87           2
 H histidine           2.5         36           1
 I isoleucine          3.4         49           2
 K lysine              4.0         58           2
 L leucine            10.7        156           5
 M methionine          2.1         30           2
 N asparagine          6.0         88           2
 P proline             6.5         95           2
 Q glutamine           4.8         70           2
 R arginine            5.1         75           2
 S serine              7.1        103           2
 T threonine           6.2         90           2
 V valine              7.0        102           3
 W tryptophan          1.9         27           1
 Y tyrosine            2.3         34           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   phospholipase B1 
LOC100129509          0.003   PREDICTED: hypothetical protein 
LOC100129509          0.003   PREDICTED: hypothetical protein 
LOC100129509          0.003   PREDICTED: hypothetical protein 
HERC4                 0.003   hect domain and RLD 4 isoform b 
HERC4                 0.003   hect domain and RLD 4 isoform a 
CCDC141               0.003   coiled-coil domain containing 141 
ATP2C1                0.002   calcium-transporting ATPase 2C1 isoform 1b 
ATP2C1                0.002   calcium-transporting ATPase 2C1 isoform 1d 
ATP2C1                0.002   calcium-transporting ATPase 2C1 isoform 1c 
ATP2C1                0.002   calcium-transporting ATPase 2C1 isoform 1a 
HMCN2                 0.002   PREDICTED: hemicentin 2 
HMCN2                 0.002   PREDICTED: hemicentin 2 
HMCN2                 0.002   PREDICTED: hemicentin 2 
ATP8A1                0.002   ATPase, aminophospholipid transporter (APLT), class...
ATP8A1                0.002   ATPase, aminophospholipid transporter (APLT), class ...
ARSD                  0.002   arylsulfatase D isoform a precursor 
UBQLN3                0.002   ubiquilin 3 
DENND4C               0.002   DENN/MADD domain containing 4C 
ARSD                  0.002   arylsulfatase D isoform b precursor 
ESYT3                 0.002   family with sequence similarity 62 (C2 domain conta...
MXRA5                 0.002   adlican 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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