BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|214010238 mahogunin, ring finger 1 isoform 4 [Homo sapiens] (531 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|214010238 mahogunin, ring finger 1 isoform 4 [Homo sapiens] 1071 0.0 gi|214010236 mahogunin, ring finger 1 isoform 3 [Homo sapiens] 1053 0.0 gi|214010234 mahogunin, ring finger 1 isoform 2 [Homo sapiens] 1045 0.0 gi|44917608 mahogunin, ring finger 1 isoform 1 [Homo sapiens] 1026 0.0 gi|58743365 ring finger protein 157 [Homo sapiens] 571 e-163 gi|14042925 ring finger protein 26 [Homo sapiens] 55 1e-07 gi|217416388 neuralized homolog 1B [Homo sapiens] 53 6e-07 gi|171542821 mitochondrial ubiquitin ligase activator of NFKB 1 ... 51 2e-06 gi|5729765 cell growth regulator with ring finger domain 1 [Homo... 50 7e-06 gi|223278368 neuralized-like [Homo sapiens] 49 1e-05 gi|53729363 leucine rich repeat and sterile alpha motif containi... 44 4e-04 gi|53729361 leucine rich repeat and sterile alpha motif containi... 44 4e-04 gi|53729359 leucine rich repeat and sterile alpha motif containi... 44 4e-04 gi|21314764 Fc receptor-like 3 precursor [Homo sapiens] 43 6e-04 gi|21361493 ring finger protein 141 [Homo sapiens] 43 6e-04 gi|62865649 rififylin [Homo sapiens] 43 8e-04 gi|17432433 rififylin [Homo sapiens] 43 8e-04 gi|89993691 mouse double minute 2 homolog isoform MDM2e [Homo sa... 42 0.001 gi|37595539 ring finger protein 34 isoform 1 [Homo sapiens] 42 0.001 gi|37595537 ring finger protein 34 isoform 2 [Homo sapiens] 42 0.001 gi|58530863 melanoma antigen family A, 10 [Homo sapiens] 42 0.001 gi|10567820 melanoma antigen family A, 10 [Homo sapiens] 42 0.001 gi|57165361 ring finger protein 165 [Homo sapiens] 42 0.001 gi|21040269 ring finger protein 133 [Homo sapiens] 41 0.002 gi|4502141 baculoviral IAP repeat-containing protein 2 [Homo sap... 40 0.004 gi|33946285 baculoviral IAP repeat-containing protein 3 [Homo sa... 40 0.005 gi|4502139 baculoviral IAP repeat-containing protein 3 [Homo sap... 40 0.005 gi|45387949 ring finger and SPRY domain containing 1 [Homo sapiens] 40 0.005 gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo ... 40 0.007 gi|148229134 ring finger and KH domain containing 2 [Homo sapiens] 40 0.007 >gi|214010238 mahogunin, ring finger 1 isoform 4 [Homo sapiens] Length = 531 Score = 1072 bits (2771), Expect = 0.0 Identities = 531/531 (100%), Positives = 531/531 (100%) Query: 1 MGSILSRRIAGVEDIDIQANSAYRYPPKSGNYFASHFFMGGEKFDTPHPEGYLFGENMDL 60 MGSILSRRIAGVEDIDIQANSAYRYPPKSGNYFASHFFMGGEKFDTPHPEGYLFGENMDL Sbjct: 1 MGSILSRRIAGVEDIDIQANSAYRYPPKSGNYFASHFFMGGEKFDTPHPEGYLFGENMDL 60 Query: 61 NFLGSRPVQFPYVTPAPHEPVKTLRSLVNIRKDSLRLVRYKDDADSPTEDGDKPRVLYSL 120 NFLGSRPVQFPYVTPAPHEPVKTLRSLVNIRKDSLRLVRYKDDADSPTEDGDKPRVLYSL Sbjct: 61 NFLGSRPVQFPYVTPAPHEPVKTLRSLVNIRKDSLRLVRYKDDADSPTEDGDKPRVLYSL 120 Query: 121 EFTFDADARVAITIYCQASEEFLNGRAVYSPKSPSLQSETVHYKRGVSQQFSLPSFKIDF 180 EFTFDADARVAITIYCQASEEFLNGRAVYSPKSPSLQSETVHYKRGVSQQFSLPSFKIDF Sbjct: 121 EFTFDADARVAITIYCQASEEFLNGRAVYSPKSPSLQSETVHYKRGVSQQFSLPSFKIDF 180 Query: 181 SEWKDDELNFDLDRGVFPVVIQAVVDEGDAVVEVTGHAHVLLAAFEKHMDGSFSVKPLKQ 240 SEWKDDELNFDLDRGVFPVVIQAVVDEGDAVVEVTGHAHVLLAAFEKHMDGSFSVKPLKQ Sbjct: 181 SEWKDDELNFDLDRGVFPVVIQAVVDEGDAVVEVTGHAHVLLAAFEKHMDGSFSVKPLKQ 240 Query: 241 KQIVDRVSYLLQEIYGIENKNNQETKPSDDENSDNSNECVVCLSDLRDTLILPCRHLCLC 300 KQIVDRVSYLLQEIYGIENKNNQETKPSDDENSDNSNECVVCLSDLRDTLILPCRHLCLC Sbjct: 241 KQIVDRVSYLLQEIYGIENKNNQETKPSDDENSDNSNECVVCLSDLRDTLILPCRHLCLC 300 Query: 301 TSCADTLRYQANNCPICRLPFRALLQIRAVRKKPGALSPVSFSPVLAQSLEHDEHSNSDS 360 TSCADTLRYQANNCPICRLPFRALLQIRAVRKKPGALSPVSFSPVLAQSLEHDEHSNSDS Sbjct: 301 TSCADTLRYQANNCPICRLPFRALLQIRAVRKKPGALSPVSFSPVLAQSLEHDEHSNSDS 360 Query: 361 VPPGYEPISLLEALNGLRAVSPAIPSAPLYEEITYSGISDGLSQASCPLAAIDHILDSSR 420 VPPGYEPISLLEALNGLRAVSPAIPSAPLYEEITYSGISDGLSQASCPLAAIDHILDSSR Sbjct: 361 VPPGYEPISLLEALNGLRAVSPAIPSAPLYEEITYSGISDGLSQASCPLAAIDHILDSSR 420 Query: 421 QKGRPQSKAPDSTLRSPSSPIHEEDEEKLSEDVDAPPPLGGAELALRESSSPESFITEEV 480 QKGRPQSKAPDSTLRSPSSPIHEEDEEKLSEDVDAPPPLGGAELALRESSSPESFITEEV Sbjct: 421 QKGRPQSKAPDSTLRSPSSPIHEEDEEKLSEDVDAPPPLGGAELALRESSSPESFITEEV 480 Query: 481 DESSSPQQGTRAASIENVLQDSSPEHCGRGPPADIYLPALGPDSCSVGIDE 531 DESSSPQQGTRAASIENVLQDSSPEHCGRGPPADIYLPALGPDSCSVGIDE Sbjct: 481 DESSSPQQGTRAASIENVLQDSSPEHCGRGPPADIYLPALGPDSCSVGIDE 531 >gi|214010236 mahogunin, ring finger 1 isoform 3 [Homo sapiens] Length = 552 Score = 1053 bits (2722), Expect = 0.0 Identities = 530/553 (95%), Positives = 530/553 (95%), Gaps = 23/553 (4%) Query: 1 MGSILSRRIAGVEDIDIQANSAYRYPPKSGNYFASHFFMGGEKFDTPHPEGYLFGENMDL 60 MGSILSRRIAGVEDIDIQANSAYRYPPKSGNYFASHFFMGGEKFDTPHPEGYLFGENMDL Sbjct: 1 MGSILSRRIAGVEDIDIQANSAYRYPPKSGNYFASHFFMGGEKFDTPHPEGYLFGENMDL 60 Query: 61 NFLGSRPVQFPYVTPAPHEPVKTLRSLVNIRKDSLRLVRYKDDADSPTEDGDKPRVLYSL 120 NFLGSRPVQFPYVTPAPHEPVKTLRSLVNIRKDSLRLVRYKDDADSPTEDGDKPRVLYSL Sbjct: 61 NFLGSRPVQFPYVTPAPHEPVKTLRSLVNIRKDSLRLVRYKDDADSPTEDGDKPRVLYSL 120 Query: 121 EFTFDADARVAITIYCQASEEFLNGRAVYSPKSPSLQSETVHYKRGVSQQFSLPSFKIDF 180 EFTFDADARVAITIYCQASEEFLNGRAVYSPKSPSLQSETVHYKRGVSQQFSLPSFKIDF Sbjct: 121 EFTFDADARVAITIYCQASEEFLNGRAVYSPKSPSLQSETVHYKRGVSQQFSLPSFKIDF 180 Query: 181 SEWKDDELNFDLDRGVFPVVIQAVVDEGDAVVEVTGHAHVLLAAFEKHMDGSFSVKPLKQ 240 SEWKDDELNFDLDRGVFPVVIQAVVDEGD VVEVTGHAHVLLAAFEKHMDGSFSVKPLKQ Sbjct: 181 SEWKDDELNFDLDRGVFPVVIQAVVDEGD-VVEVTGHAHVLLAAFEKHMDGSFSVKPLKQ 239 Query: 241 KQIVDRVSYLLQEIYGIENKNNQETKPSDDENSDNSNECVVCLSDLRDTLILPCRHLCLC 300 KQIVDRVSYLLQEIYGIENKNNQETKPSDDENSDNSNECVVCLSDLRDTLILPCRHLCLC Sbjct: 240 KQIVDRVSYLLQEIYGIENKNNQETKPSDDENSDNSNECVVCLSDLRDTLILPCRHLCLC 299 Query: 301 TSCADTLRYQANNCPICRLPFRALLQIRAVRKKPGALSPVSFSPVLAQSLEHDEHS---- 356 TSCADTLRYQANNCPICRLPFRALLQIRAVRKKPGALSPVSFSPVLAQSLEHDEHS Sbjct: 300 TSCADTLRYQANNCPICRLPFRALLQIRAVRKKPGALSPVSFSPVLAQSLEHDEHSCPFK 359 Query: 357 ------------------NSDSVPPGYEPISLLEALNGLRAVSPAIPSAPLYEEITYSGI 398 NSDSVPPGYEPISLLEALNGLRAVSPAIPSAPLYEEITYSGI Sbjct: 360 KSKPHPASLASKKPKRETNSDSVPPGYEPISLLEALNGLRAVSPAIPSAPLYEEITYSGI 419 Query: 399 SDGLSQASCPLAAIDHILDSSRQKGRPQSKAPDSTLRSPSSPIHEEDEEKLSEDVDAPPP 458 SDGLSQASCPLAAIDHILDSSRQKGRPQSKAPDSTLRSPSSPIHEEDEEKLSEDVDAPPP Sbjct: 420 SDGLSQASCPLAAIDHILDSSRQKGRPQSKAPDSTLRSPSSPIHEEDEEKLSEDVDAPPP 479 Query: 459 LGGAELALRESSSPESFITEEVDESSSPQQGTRAASIENVLQDSSPEHCGRGPPADIYLP 518 LGGAELALRESSSPESFITEEVDESSSPQQGTRAASIENVLQDSSPEHCGRGPPADIYLP Sbjct: 480 LGGAELALRESSSPESFITEEVDESSSPQQGTRAASIENVLQDSSPEHCGRGPPADIYLP 539 Query: 519 ALGPDSCSVGIDE 531 ALGPDSCSVGIDE Sbjct: 540 ALGPDSCSVGIDE 552 >gi|214010234 mahogunin, ring finger 1 isoform 2 [Homo sapiens] Length = 555 Score = 1045 bits (2702), Expect = 0.0 Identities = 518/518 (100%), Positives = 518/518 (100%) Query: 1 MGSILSRRIAGVEDIDIQANSAYRYPPKSGNYFASHFFMGGEKFDTPHPEGYLFGENMDL 60 MGSILSRRIAGVEDIDIQANSAYRYPPKSGNYFASHFFMGGEKFDTPHPEGYLFGENMDL Sbjct: 1 MGSILSRRIAGVEDIDIQANSAYRYPPKSGNYFASHFFMGGEKFDTPHPEGYLFGENMDL 60 Query: 61 NFLGSRPVQFPYVTPAPHEPVKTLRSLVNIRKDSLRLVRYKDDADSPTEDGDKPRVLYSL 120 NFLGSRPVQFPYVTPAPHEPVKTLRSLVNIRKDSLRLVRYKDDADSPTEDGDKPRVLYSL Sbjct: 61 NFLGSRPVQFPYVTPAPHEPVKTLRSLVNIRKDSLRLVRYKDDADSPTEDGDKPRVLYSL 120 Query: 121 EFTFDADARVAITIYCQASEEFLNGRAVYSPKSPSLQSETVHYKRGVSQQFSLPSFKIDF 180 EFTFDADARVAITIYCQASEEFLNGRAVYSPKSPSLQSETVHYKRGVSQQFSLPSFKIDF Sbjct: 121 EFTFDADARVAITIYCQASEEFLNGRAVYSPKSPSLQSETVHYKRGVSQQFSLPSFKIDF 180 Query: 181 SEWKDDELNFDLDRGVFPVVIQAVVDEGDAVVEVTGHAHVLLAAFEKHMDGSFSVKPLKQ 240 SEWKDDELNFDLDRGVFPVVIQAVVDEGDAVVEVTGHAHVLLAAFEKHMDGSFSVKPLKQ Sbjct: 181 SEWKDDELNFDLDRGVFPVVIQAVVDEGDAVVEVTGHAHVLLAAFEKHMDGSFSVKPLKQ 240 Query: 241 KQIVDRVSYLLQEIYGIENKNNQETKPSDDENSDNSNECVVCLSDLRDTLILPCRHLCLC 300 KQIVDRVSYLLQEIYGIENKNNQETKPSDDENSDNSNECVVCLSDLRDTLILPCRHLCLC Sbjct: 241 KQIVDRVSYLLQEIYGIENKNNQETKPSDDENSDNSNECVVCLSDLRDTLILPCRHLCLC 300 Query: 301 TSCADTLRYQANNCPICRLPFRALLQIRAVRKKPGALSPVSFSPVLAQSLEHDEHSNSDS 360 TSCADTLRYQANNCPICRLPFRALLQIRAVRKKPGALSPVSFSPVLAQSLEHDEHSNSDS Sbjct: 301 TSCADTLRYQANNCPICRLPFRALLQIRAVRKKPGALSPVSFSPVLAQSLEHDEHSNSDS 360 Query: 361 VPPGYEPISLLEALNGLRAVSPAIPSAPLYEEITYSGISDGLSQASCPLAAIDHILDSSR 420 VPPGYEPISLLEALNGLRAVSPAIPSAPLYEEITYSGISDGLSQASCPLAAIDHILDSSR Sbjct: 361 VPPGYEPISLLEALNGLRAVSPAIPSAPLYEEITYSGISDGLSQASCPLAAIDHILDSSR 420 Query: 421 QKGRPQSKAPDSTLRSPSSPIHEEDEEKLSEDVDAPPPLGGAELALRESSSPESFITEEV 480 QKGRPQSKAPDSTLRSPSSPIHEEDEEKLSEDVDAPPPLGGAELALRESSSPESFITEEV Sbjct: 421 QKGRPQSKAPDSTLRSPSSPIHEEDEEKLSEDVDAPPPLGGAELALRESSSPESFITEEV 480 Query: 481 DESSSPQQGTRAASIENVLQDSSPEHCGRGPPADIYLP 518 DESSSPQQGTRAASIENVLQDSSPEHCGRGPPADIYLP Sbjct: 481 DESSSPQQGTRAASIENVLQDSSPEHCGRGPPADIYLP 518 >gi|44917608 mahogunin, ring finger 1 isoform 1 [Homo sapiens] Length = 576 Score = 1026 bits (2653), Expect = 0.0 Identities = 517/540 (95%), Positives = 517/540 (95%), Gaps = 23/540 (4%) Query: 1 MGSILSRRIAGVEDIDIQANSAYRYPPKSGNYFASHFFMGGEKFDTPHPEGYLFGENMDL 60 MGSILSRRIAGVEDIDIQANSAYRYPPKSGNYFASHFFMGGEKFDTPHPEGYLFGENMDL Sbjct: 1 MGSILSRRIAGVEDIDIQANSAYRYPPKSGNYFASHFFMGGEKFDTPHPEGYLFGENMDL 60 Query: 61 NFLGSRPVQFPYVTPAPHEPVKTLRSLVNIRKDSLRLVRYKDDADSPTEDGDKPRVLYSL 120 NFLGSRPVQFPYVTPAPHEPVKTLRSLVNIRKDSLRLVRYKDDADSPTEDGDKPRVLYSL Sbjct: 61 NFLGSRPVQFPYVTPAPHEPVKTLRSLVNIRKDSLRLVRYKDDADSPTEDGDKPRVLYSL 120 Query: 121 EFTFDADARVAITIYCQASEEFLNGRAVYSPKSPSLQSETVHYKRGVSQQFSLPSFKIDF 180 EFTFDADARVAITIYCQASEEFLNGRAVYSPKSPSLQSETVHYKRGVSQQFSLPSFKIDF Sbjct: 121 EFTFDADARVAITIYCQASEEFLNGRAVYSPKSPSLQSETVHYKRGVSQQFSLPSFKIDF 180 Query: 181 SEWKDDELNFDLDRGVFPVVIQAVVDEGDAVVEVTGHAHVLLAAFEKHMDGSFSVKPLKQ 240 SEWKDDELNFDLDRGVFPVVIQAVVDEGD VVEVTGHAHVLLAAFEKHMDGSFSVKPLKQ Sbjct: 181 SEWKDDELNFDLDRGVFPVVIQAVVDEGD-VVEVTGHAHVLLAAFEKHMDGSFSVKPLKQ 239 Query: 241 KQIVDRVSYLLQEIYGIENKNNQETKPSDDENSDNSNECVVCLSDLRDTLILPCRHLCLC 300 KQIVDRVSYLLQEIYGIENKNNQETKPSDDENSDNSNECVVCLSDLRDTLILPCRHLCLC Sbjct: 240 KQIVDRVSYLLQEIYGIENKNNQETKPSDDENSDNSNECVVCLSDLRDTLILPCRHLCLC 299 Query: 301 TSCADTLRYQANNCPICRLPFRALLQIRAVRKKPGALSPVSFSPVLAQSLEHDEHS---- 356 TSCADTLRYQANNCPICRLPFRALLQIRAVRKKPGALSPVSFSPVLAQSLEHDEHS Sbjct: 300 TSCADTLRYQANNCPICRLPFRALLQIRAVRKKPGALSPVSFSPVLAQSLEHDEHSCPFK 359 Query: 357 ------------------NSDSVPPGYEPISLLEALNGLRAVSPAIPSAPLYEEITYSGI 398 NSDSVPPGYEPISLLEALNGLRAVSPAIPSAPLYEEITYSGI Sbjct: 360 KSKPHPASLASKKPKRETNSDSVPPGYEPISLLEALNGLRAVSPAIPSAPLYEEITYSGI 419 Query: 399 SDGLSQASCPLAAIDHILDSSRQKGRPQSKAPDSTLRSPSSPIHEEDEEKLSEDVDAPPP 458 SDGLSQASCPLAAIDHILDSSRQKGRPQSKAPDSTLRSPSSPIHEEDEEKLSEDVDAPPP Sbjct: 420 SDGLSQASCPLAAIDHILDSSRQKGRPQSKAPDSTLRSPSSPIHEEDEEKLSEDVDAPPP 479 Query: 459 LGGAELALRESSSPESFITEEVDESSSPQQGTRAASIENVLQDSSPEHCGRGPPADIYLP 518 LGGAELALRESSSPESFITEEVDESSSPQQGTRAASIENVLQDSSPEHCGRGPPADIYLP Sbjct: 480 LGGAELALRESSSPESFITEEVDESSSPQQGTRAASIENVLQDSSPEHCGRGPPADIYLP 539 >gi|58743365 ring finger protein 157 [Homo sapiens] Length = 679 Score = 571 bits (1471), Expect = e-163 Identities = 291/454 (64%), Positives = 349/454 (76%), Gaps = 11/454 (2%) Query: 1 MGSILSRRIAGVEDIDIQANSAYRYPPKSGNYFASHFFMGGEKFDTPHPEGYLFGENMDL 60 MG++ SR+ AGVE++DI +NS YRYPPKSG+YFASHF MGGEKFD+ HPEGYLFGEN DL Sbjct: 1 MGALTSRQHAGVEEVDIPSNSVYRYPPKSGSYFASHFIMGGEKFDSTHPEGYLFGENSDL 60 Query: 61 NFLGSRPVQFPYVTPAPHEPVKTLRSLVNIRKDSLRLVRYKDDADSPTEDGDKPRVLYSL 120 NFLG+RPV FPY P P EPVKTLRSLVNIRKD+LRLV+ ++ SP E+ K +V Y++ Sbjct: 61 NFLGNRPVVFPYAAPPPQEPVKTLRSLVNIRKDTLRLVKCAEEVKSPGEEASKAKVHYNV 120 Query: 121 EFTFDADARVAITIYCQASEEFLNGRAVYSPKSPSLQSETVHYKRGVSQQFSLPSFKIDF 180 EFTFD DARVAITIY QA+EEF NG A Y PK SLQSETV YKRGV QQF LPS +D Sbjct: 121 EFTFDTDARVAITIYYQATEEFQNGIASYIPKDNSLQSETVQYKRGVCQQFCLPSHTVDP 180 Query: 181 SEWKDDELNFDLDRGVFPVVIQAVVDEGDAVVEVTGHAHVLLAAFEKHMDGSFSVKPLKQ 240 SEW ++EL FDLDR V+P+V+ AVVDEGD E GH HVLL FEKH DG+F VKPLKQ Sbjct: 181 SEWAEEELGFDLDREVYPLVVHAVVDEGD---EYFGHCHVLLGTFEKHTDGTFCVKPLKQ 237 Query: 241 KQIVDRVSYLLQEIYGIENK-NNQETKPSDDENSDNSNECVVCLSDLRDTLILPCRHLCL 299 KQ+VD VSYLLQEIYGIENK N Q++K ++DE SDNS ECVVCLSD+RDTLILPCRHLCL Sbjct: 238 KQVVDGVSYLLQEIYGIENKYNTQDSKVAEDEVSDNSAECVVCLSDVRDTLILPCRHLCL 297 Query: 300 CTSCADTLRYQANNCPICRLPFRALLQIRAVRKKPGALSPVSFSPVL-AQSLEHDEHSNS 358 C +CADTLRYQANNCPICRLPFRALLQIRA+RKK G LSP SF+P++ +Q+ + +EH +S Sbjct: 298 CNTCADTLRYQANNCPICRLPFRALLQIRAMRKKLGPLSPTSFNPIISSQTSDSEEHPSS 357 Query: 359 DSVPPGYEPISLLEALNGLRAVSPAIPSAPLYEEITYSGI-----SDGLSQASCPLAAID 413 +++PPGYE +SLLEALNG SPA+P + + SG+ SDG ++ +D Sbjct: 358 ENIPPGYEVVSLLEALNGPLTPSPAVPPLHVLGDGHLSGMLPSYGSDGHLPPVRTISPLD 417 Query: 414 HILDSSRQKGRPQSKAPDSTLRSPSSPIHEEDEE 447 + DSS Q G K+ + SS +HEE++E Sbjct: 418 RLSDSSSQ-GLKLKKSLSKSTSQNSSVLHEEEDE 450 >gi|14042925 ring finger protein 26 [Homo sapiens] Length = 433 Score = 55.5 bits (132), Expect = 1e-07 Identities = 28/81 (34%), Positives = 40/81 (49%), Gaps = 11/81 (13%) Query: 254 IYGIENKNNQETKPSDD-----ENSDNSNECVVCLSDLRDTLILPCRHLCLCTSCADTLR 308 + G E N +E D + + +CV+C + L+LPCRHLCLC +C + L Sbjct: 350 VRGRERLNEEEPPGGQDPWKLLKEQEERKKCVICQDQSKTVLLLPCRHLCLCQACTEILM 409 Query: 309 YQA---NNCPICRLPFRALLQ 326 NCP+CR R +LQ Sbjct: 410 RHPVYHRNCPLCR---RGILQ 427 >gi|217416388 neuralized homolog 1B [Homo sapiens] Length = 555 Score = 53.1 bits (126), Expect = 6e-07 Identities = 24/53 (45%), Positives = 32/53 (60%), Gaps = 1/53 (1%) Query: 276 SNECVVCLSDLRDTLILPCRHLCLCTSCADTLRYQANN-CPICRLPFRALLQI 327 + EC VC DT+I C H+CLC SC L+ QA CPICR P + +++I Sbjct: 500 NGECTVCFDGEVDTVIYTCGHMCLCHSCGLRLKRQARACCPICRRPIKDVIKI 552 >gi|171542821 mitochondrial ubiquitin ligase activator of NFKB 1 [Homo sapiens] Length = 352 Score = 51.2 bits (121), Expect = 2e-06 Identities = 29/83 (34%), Positives = 41/83 (49%), Gaps = 3/83 (3%) Query: 236 KPLKQKQIVDRVSYLLQEIYGIENKNNQETKPSDDENSDNSNECVVCLSDLRDTLILPCR 295 K Q+Q R+ + +E E + KP D E+ ++ CVVCLS + + L C Sbjct: 261 KQYLQRQERLRLKQMQEEFQEHEAQLLSRAKPEDRESLKSA--CVVCLSSFKSCVFLECG 318 Query: 296 HLCLCTSCADTLRYQANNCPICR 318 H+C CT C L + CPICR Sbjct: 319 HVCSCTECYRALP-EPKKCPICR 340 >gi|5729765 cell growth regulator with ring finger domain 1 [Homo sapiens] Length = 332 Score = 49.7 bits (117), Expect = 7e-06 Identities = 22/58 (37%), Positives = 33/58 (56%), Gaps = 8/58 (13%) Query: 261 NNQETKPSDDENSDNSNECVVCLSDLRDTLILPCRHLCLCTSCADTLRYQANNCPICR 318 + E +PS++ NS +CVVC + + ++LPCRH CLC C + CP+CR Sbjct: 260 SESEVEPSEE----NSKDCVVCQNGTVNWVLLPCRHTCLCDGCVKYFQ----QCPMCR 309 >gi|223278368 neuralized-like [Homo sapiens] Length = 574 Score = 48.5 bits (114), Expect = 1e-05 Identities = 20/52 (38%), Positives = 31/52 (59%), Gaps = 1/52 (1%) Query: 276 SNECVVCLSDLRDTLILPCRHLCLCTSCADTLRYQANN-CPICRLPFRALLQ 326 S+EC +C DT+I C H+CLC +C L+ + CPICR P + +++ Sbjct: 518 SDECTICYEHAVDTVIYTCGHMCLCYACGLRLKKALHACCPICRRPIKDIIK 569 >gi|53729363 leucine rich repeat and sterile alpha motif containing 1 [Homo sapiens] Length = 723 Score = 43.9 bits (102), Expect = 4e-04 Identities = 20/52 (38%), Positives = 26/52 (50%), Gaps = 4/52 (7%) Query: 276 SNECVVCLSDLRDTLILPCRHLCLCTSCADTLRYQANNCPICRLPFRALLQI 327 ++ECVVCL + L C H+C C C LR CP+CR L+I Sbjct: 672 ASECVVCLEREAQMIFLNCGHVCCCQQCCQPLR----TCPLCRQDIAQRLRI 719 >gi|53729361 leucine rich repeat and sterile alpha motif containing 1 [Homo sapiens] Length = 723 Score = 43.9 bits (102), Expect = 4e-04 Identities = 20/52 (38%), Positives = 26/52 (50%), Gaps = 4/52 (7%) Query: 276 SNECVVCLSDLRDTLILPCRHLCLCTSCADTLRYQANNCPICRLPFRALLQI 327 ++ECVVCL + L C H+C C C LR CP+CR L+I Sbjct: 672 ASECVVCLEREAQMIFLNCGHVCCCQQCCQPLR----TCPLCRQDIAQRLRI 719 >gi|53729359 leucine rich repeat and sterile alpha motif containing 1 [Homo sapiens] Length = 723 Score = 43.9 bits (102), Expect = 4e-04 Identities = 20/52 (38%), Positives = 26/52 (50%), Gaps = 4/52 (7%) Query: 276 SNECVVCLSDLRDTLILPCRHLCLCTSCADTLRYQANNCPICRLPFRALLQI 327 ++ECVVCL + L C H+C C C LR CP+CR L+I Sbjct: 672 ASECVVCLEREAQMIFLNCGHVCCCQQCCQPLR----TCPLCRQDIAQRLRI 719 >gi|21314764 Fc receptor-like 3 precursor [Homo sapiens] Length = 734 Score = 43.1 bits (100), Expect = 6e-04 Identities = 42/139 (30%), Positives = 65/139 (46%), Gaps = 13/139 (9%) Query: 323 ALLQIRAVRKKPGALSPV---SFSPVLAQSLEHDEHSNSDSVPPGY-EPISLLEALNGLR 378 ALL R+KPG LS S SP Q S D P + +P++ +E Sbjct: 592 ALLHYARARRKPGGLSATGTSSHSPSECQEPSSSRPSRIDPQEPTHSKPLAPMELEPMYS 651 Query: 379 AVSPAIPSAPLYEEITYSGISDGLSQASCPLAAIDH----ILDSSRQKGRPQSKAPDSTL 434 V+P S P+Y +I +S + A+CP+ +H +L S +K P A +++ Sbjct: 652 NVNPG-DSNPIYSQI-WSIQHTKENSANCPMMHQEHEELTVLYSELKKTHPDDSAGEASS 709 Query: 435 RSPSSPIHEEDEEKLSEDV 453 R + HEED+E+ E+V Sbjct: 710 RGRA---HEEDDEENYENV 725 >gi|21361493 ring finger protein 141 [Homo sapiens] Length = 230 Score = 43.1 bits (100), Expect = 6e-04 Identities = 21/45 (46%), Positives = 25/45 (55%), Gaps = 2/45 (4%) Query: 275 NSNECVVCLSDLRDTLILPCRHLCLCTSCADTLRYQANNCPICRL 319 + EC +C+ D R LILPC H C C D + NCPICRL Sbjct: 151 DEEECCICM-DGRADLILPCAH-SFCQKCIDKWSDRHRNCPICRL 193 >gi|62865649 rififylin [Homo sapiens] Length = 363 Score = 42.7 bits (99), Expect = 8e-04 Identities = 22/83 (26%), Positives = 41/83 (49%), Gaps = 14/83 (16%) Query: 242 QIVDRVSYLLQEIYGIENKNNQETKPSDDENSD------NSNECVVCLSDLRDTLILPCR 295 ++++RV+ L ++ G+++ ++D+N N C +C+ D ++L C Sbjct: 277 ELMERVTRLYKDQKGLQHL----VSGAEDQNGGAVPSGLEENLCKICMDSPIDCVLLECG 332 Query: 296 HLCLCTSCADTLRYQANNCPICR 318 H+ CT C + N CPICR Sbjct: 333 HMVTCTKCGKRM----NECPICR 351 >gi|17432433 rififylin [Homo sapiens] Length = 363 Score = 42.7 bits (99), Expect = 8e-04 Identities = 22/83 (26%), Positives = 41/83 (49%), Gaps = 14/83 (16%) Query: 242 QIVDRVSYLLQEIYGIENKNNQETKPSDDENSD------NSNECVVCLSDLRDTLILPCR 295 ++++RV+ L ++ G+++ ++D+N N C +C+ D ++L C Sbjct: 277 ELMERVTRLYKDQKGLQHL----VSGAEDQNGGAVPSGLEENLCKICMDSPIDCVLLECG 332 Query: 296 HLCLCTSCADTLRYQANNCPICR 318 H+ CT C + N CPICR Sbjct: 333 HMVTCTKCGKRM----NECPICR 351 >gi|89993691 mouse double minute 2 homolog isoform MDM2e [Homo sapiens] Length = 179 Score = 42.4 bits (98), Expect = 0.001 Identities = 25/99 (25%), Positives = 51/99 (51%), Gaps = 12/99 (12%) Query: 239 KQKQIVDRVSYLLQEIYGIENKNNQETKPSDDENSDNSNE----------CVVCLSDLRD 288 KQ+ IV + LL +++G+ + + +E + + ++ + S E CV+C ++ Sbjct: 76 KQQHIVYCSNDLLGDLFGVPSFSVKEFEREETQDKEESVESSLPLNAIEPCVICQGRPKN 135 Query: 289 TLILPCR--HLCLCTSCADTLRYQANNCPICRLPFRALL 325 I+ + HL C +CA L+ + CP+CR P + ++ Sbjct: 136 GCIVHGKTGHLMACFTCAKKLKKRNKPCPVCRQPIQMIV 174 >gi|37595539 ring finger protein 34 isoform 1 [Homo sapiens] Length = 373 Score = 42.4 bits (98), Expect = 0.001 Identities = 22/79 (27%), Positives = 42/79 (53%), Gaps = 11/79 (13%) Query: 242 QIVDRVSYLLQEIYGIENKNNQETKPSDDENSDNSNE--CVVCLSDLRDTLILPCRHLCL 299 ++V++V+ L +E N+ NQ++ + D ++ C +C+ + D ++L C H+ Sbjct: 292 ELVEKVNRLYKE-----NEENQKSYGERLQLQDEEDDSLCRICMDAVIDCVLLECGHMVT 346 Query: 300 CTSCADTLRYQANNCPICR 318 CT C + + CPICR Sbjct: 347 CTKCGKRM----SECPICR 361 >gi|37595537 ring finger protein 34 isoform 2 [Homo sapiens] Length = 372 Score = 42.4 bits (98), Expect = 0.001 Identities = 22/79 (27%), Positives = 42/79 (53%), Gaps = 11/79 (13%) Query: 242 QIVDRVSYLLQEIYGIENKNNQETKPSDDENSDNSNE--CVVCLSDLRDTLILPCRHLCL 299 ++V++V+ L +E N+ NQ++ + D ++ C +C+ + D ++L C H+ Sbjct: 291 ELVEKVNRLYKE-----NEENQKSYGERLQLQDEEDDSLCRICMDAVIDCVLLECGHMVT 345 Query: 300 CTSCADTLRYQANNCPICR 318 CT C + + CPICR Sbjct: 346 CTKCGKRM----SECPICR 360 >gi|58530863 melanoma antigen family A, 10 [Homo sapiens] Length = 369 Score = 42.0 bits (97), Expect = 0.001 Identities = 33/114 (28%), Positives = 52/114 (45%), Gaps = 3/114 (2%) Query: 391 EEITYSGISDGLSQASCPLAAIDHILDSSRQKGRPQSKAPDSTLRSPSS--PIHEEDEEK 448 E++ + GL A PLA + S+ S P S+ S SS P+ E+ Sbjct: 14 EDLQSQSETQGLEGAQAPLAVEEDASSSTSTSSSFPSSFPSSSSSSSSSCYPLIPSTPEE 73 Query: 449 LSEDVDAPPPLGGAELALRESSSPESFITEEVDESSSPQQGTRAASIENVLQDS 502 +S D + P P A++A S S ++ DE SS Q+ ++++ VL DS Sbjct: 74 VSADDETPNPPQSAQIACSSPSVVASLPLDQSDEGSSSQKEESPSTLQ-VLPDS 126 >gi|10567820 melanoma antigen family A, 10 [Homo sapiens] Length = 369 Score = 42.0 bits (97), Expect = 0.001 Identities = 33/114 (28%), Positives = 52/114 (45%), Gaps = 3/114 (2%) Query: 391 EEITYSGISDGLSQASCPLAAIDHILDSSRQKGRPQSKAPDSTLRSPSS--PIHEEDEEK 448 E++ + GL A PLA + S+ S P S+ S SS P+ E+ Sbjct: 14 EDLQSQSETQGLEGAQAPLAVEEDASSSTSTSSSFPSSFPSSSSSSSSSCYPLIPSTPEE 73 Query: 449 LSEDVDAPPPLGGAELALRESSSPESFITEEVDESSSPQQGTRAASIENVLQDS 502 +S D + P P A++A S S ++ DE SS Q+ ++++ VL DS Sbjct: 74 VSADDETPNPPQSAQIACSSPSVVASLPLDQSDEGSSSQKEESPSTLQ-VLPDS 126 >gi|57165361 ring finger protein 165 [Homo sapiens] Length = 346 Score = 42.0 bits (97), Expect = 0.001 Identities = 23/63 (36%), Positives = 28/63 (44%), Gaps = 4/63 (6%) Query: 266 KPSDDENSDNSNECVVCLS---DLRDTLILPCRHLCLCTSCADTLRYQANNCPICRLPFR 322 K + E SD +C +CLS D D LPC HL C D + CPICR+ Sbjct: 281 KKDEGEESDTDEKCTICLSMLEDGEDVRRLPCMHL-FHQLCVDQWLAMSKKCPICRVDIE 339 Query: 323 ALL 325 L Sbjct: 340 TQL 342 >gi|21040269 ring finger protein 133 [Homo sapiens] Length = 376 Score = 41.2 bits (95), Expect = 0.002 Identities = 27/101 (26%), Positives = 42/101 (41%), Gaps = 4/101 (3%) Query: 266 KPSDDENSDNSNECVVCLSDLRDT---LILPCRHLCLCTSCADTLRYQANNCPICRLPFR 322 K D+E + N + CV+C + IL C+H +C D CPIC+ Sbjct: 243 KEGDEEINPNGDSCVICFERYKPNDIVRILTCKHF-FHKNCIDPWILPHGTCPICKCDIL 301 Query: 323 ALLQIRAVRKKPGALSPVSFSPVLAQSLEHDEHSNSDSVPP 363 +L I+ V + V S L ++L E ++ V P Sbjct: 302 KVLGIQVVVENGTEPLQVLMSNELPETLSPSEEETNNEVSP 342 >gi|4502141 baculoviral IAP repeat-containing protein 2 [Homo sapiens] Length = 618 Score = 40.4 bits (93), Expect = 0.004 Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 4/40 (10%) Query: 279 CVVCLSDLRDTLILPCRHLCLCTSCADTLRYQANNCPICR 318 C VC+ + +PC HL +C CA +LR CPICR Sbjct: 571 CKVCMDKEVSVVFIPCGHLVVCQECAPSLR----KCPICR 606 >gi|33946285 baculoviral IAP repeat-containing protein 3 [Homo sapiens] Length = 604 Score = 40.0 bits (92), Expect = 0.005 Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 4/40 (10%) Query: 279 CVVCLSDLRDTLILPCRHLCLCTSCADTLRYQANNCPICR 318 C VC+ + +PC HL +C CA +LR CPICR Sbjct: 557 CKVCMDKEVSIVFIPCGHLVVCKDCAPSLR----KCPICR 592 >gi|4502139 baculoviral IAP repeat-containing protein 3 [Homo sapiens] Length = 604 Score = 40.0 bits (92), Expect = 0.005 Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 4/40 (10%) Query: 279 CVVCLSDLRDTLILPCRHLCLCTSCADTLRYQANNCPICR 318 C VC+ + +PC HL +C CA +LR CPICR Sbjct: 557 CKVCMDKEVSIVFIPCGHLVVCKDCAPSLR----KCPICR 592 >gi|45387949 ring finger and SPRY domain containing 1 [Homo sapiens] Length = 576 Score = 40.0 bits (92), Expect = 0.005 Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 4/46 (8%) Query: 273 SDNSNECVVCLSDLRDTLILPCRHLCLCTSCADTLRYQANNCPICR 318 S N C +C ++ DT + PC H LC CA Q CP+CR Sbjct: 521 SIRENCCSLCCDEVADTQLKPCGHSDLCMDCA----LQLETCPLCR 562 >gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo sapiens] Length = 5537 Score = 39.7 bits (91), Expect = 0.007 Identities = 38/130 (29%), Positives = 56/130 (43%), Gaps = 13/130 (10%) Query: 359 DSVPPGYEPISLLEALNGLRAVSPAIPSAPLYEEITYSGISDGLSQASCPLAAIDHILDS 418 D+V PGY S L+ L+ L+ SPA P P TY+ + + Q S P Sbjct: 4861 DAVLPGYTLKSQLDILSLLKQESPA-PEPPTQHSYTYNVSNLDVRQLSAP---------P 4910 Query: 419 SRQKGRPQSKAPDSTLRSPSSPIHEEDEEKLSE-DVDAPPPLGGAELALRESSSPESFIT 477 + P S S P+ P+ E E L+E V +P PL + + R P + Sbjct: 4911 PEEPSPPPSPLAPSPASPPTEPLVELPTEPLAEPPVPSPLPLASSPESAR--PKPRARPP 4968 Query: 478 EEVDESSSPQ 487 EE ++S P+ Sbjct: 4969 EEGEDSRPPR 4978 Score = 32.0 bits (71), Expect = 1.4 Identities = 41/159 (25%), Positives = 62/159 (38%), Gaps = 17/159 (10%) Query: 360 SVPPGYEPISLLEALNGLRAVSPAIPSAPLYEEITYSGISDGLSQASCPLAAIDHILDSS 419 S PP P S + L +P++PL E + +S L ++ PL S Sbjct: 450 SPPPEESPTSPPPEASRLSPPPEELPASPLPEALH---LSRPLEES--PL--------SP 496 Query: 420 RQKGRPQSKAPDSTLRSP--SSPIHEEDEEKLSEDVDAP--PPLGGAELALRESSSPESF 475 + P S P+S+ SP SP+ +E S ++ P PP + L+ SP S Sbjct: 497 PPEESPLSPPPESSPFSPLEESPLSPPEESPPSPALETPLSPPPEASPLSPPFEESPLSP 556 Query: 476 ITEEVDESSSPQQGTRAASIENVLQDSSPEHCGRGPPAD 514 EE+ S P+ + E PE PP + Sbjct: 557 PPEELPTSPPPEASRLSPPPEESPMSPPPEESPMSPPPE 595 >gi|148229134 ring finger and KH domain containing 2 [Homo sapiens] Length = 659 Score = 39.7 bits (91), Expect = 0.007 Identities = 17/72 (23%), Positives = 34/72 (47%), Gaps = 1/72 (1%) Query: 259 NKNNQETKPSDDENSDNSNECVVCLSDLRDTLILPCRHLCLCTSCADTL-RYQANNCPIC 317 + +N + S S ++CV+C + ++PC H C CA+ + + +CP+C Sbjct: 588 SSSNGGSTSSSPPESRRKHDCVICFENEVIAALVPCGHNLFCMECANKICEKRTPSCPVC 647 Query: 318 RLPFRALLQIRA 329 + +QI + Sbjct: 648 QTAVTQAIQIHS 659 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.315 0.133 0.391 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 23,169,614 Number of Sequences: 37866 Number of extensions: 1172090 Number of successful extensions: 3528 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 47 Number of HSP's successfully gapped in prelim test: 192 Number of HSP's that attempted gapping in prelim test: 3389 Number of HSP's gapped (non-prelim): 300 length of query: 531 length of database: 18,247,518 effective HSP length: 107 effective length of query: 424 effective length of database: 14,195,856 effective search space: 6019042944 effective search space used: 6019042944 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (22.0 bits) S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.