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Search of human proteins with 214010212
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|214010212 archain isoform 2 [Homo sapiens]
(423 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|214010212 archain isoform 2 [Homo sapiens] 848 0.0
gi|11863154 archain isoform 1 [Homo sapiens] 847 0.0
gi|22035679 AT rich interactive domain 4B isoform 2 [Homo sapiens] 37 0.044
gi|22035677 AT rich interactive domain 4B isoform 1 [Homo sapiens] 37 0.044
gi|214010175 CLIP-associating protein 1 isoform 3 [Homo sapiens] 36 0.075
gi|214010173 CLIP-associating protein 1 isoform 2 [Homo sapiens] 36 0.075
gi|31563537 CLIP-associating protein 1 isoform 1 [Homo sapiens] 36 0.075
gi|21361272 myeloid/lymphoid or mixed-lineage leukemia (trithora... 35 0.17
gi|112789562 interferon, gamma-inducible protein 16 [Homo sapiens] 34 0.22
gi|52426743 cisplatin resistance-associated overexpressed protei... 34 0.29
gi|19923485 cisplatin resistance-associated overexpressed protei... 34 0.29
gi|149999378 inverted formin 2 isoform 2 [Homo sapiens] 33 0.64
gi|149999380 inverted formin 2 isoform 1 [Homo sapiens] 33 0.64
gi|61097912 nucleolar protein with MIF4G domain 1 [Homo sapiens] 33 0.64
gi|92087055 PERQ amino acid rich, with GYF domain 1 [Homo sapiens] 32 0.83
gi|55749531 splicing factor 3B subunit 2 [Homo sapiens] 32 1.1
gi|167466173 heat shock 70kDa protein 1B [Homo sapiens] 31 1.9
gi|194248072 heat shock 70kDa protein 1A [Homo sapiens] 31 1.9
gi|5803145 ralA binding protein 1 [Homo sapiens] 31 1.9
gi|55769537 zinc finger protein 658 [Homo sapiens] 31 1.9
gi|156766047 GRB10 interacting GYF protein 2 isoform c [Homo sap... 31 2.4
gi|156766045 GRB10 interacting GYF protein 2 isoform a [Homo sap... 31 2.4
gi|156766043 GRB10 interacting GYF protein 2 isoform b [Homo sap... 31 2.4
gi|42476299 GRB10 interacting GYF protein 2 isoform b [Homo sapi... 31 2.4
gi|24308069 zinc finger protein 521 [Homo sapiens] 31 2.4
gi|116235472 SH3-domain GRB2-like (endophilin) interacting prote... 31 2.4
gi|16332372 cell division cycle 2-like 1 (PITSLRE proteins) isof... 31 2.4
gi|16332370 cell division cycle 2-like 1 (PITSLRE proteins) isof... 31 2.4
gi|133922600 splicing factor, arginine/serine-rich 16 [Homo sapi... 31 2.4
gi|122937219 F-box protein 41 [Homo sapiens] 31 2.4
>gi|214010212 archain isoform 2 [Homo sapiens]
Length = 423
Score = 848 bits (2191), Expect = 0.0
Identities = 423/423 (100%), Positives = 423/423 (100%)
Query: 1 MIPEYCRALEENEISEHCFDLIFAFDEIVALGYRENVNLAQIRTFTEMDSHEEKVFRAVR 60
MIPEYCRALEENEISEHCFDLIFAFDEIVALGYRENVNLAQIRTFTEMDSHEEKVFRAVR
Sbjct: 1 MIPEYCRALEENEISEHCFDLIFAFDEIVALGYRENVNLAQIRTFTEMDSHEEKVFRAVR 60
Query: 61 ETQEREAKAEMRRKAKELQQARRDAERQGKKAPGFGGFGSSAVSGGSTAAMITETIIETD 120
ETQEREAKAEMRRKAKELQQARRDAERQGKKAPGFGGFGSSAVSGGSTAAMITETIIETD
Sbjct: 61 ETQEREAKAEMRRKAKELQQARRDAERQGKKAPGFGGFGSSAVSGGSTAAMITETIIETD 120
Query: 121 KPKVAPAPARPSGPSKALKLGAKGKEVDNFVDKLKSEGETIMSSSMGKRTSEATKMHAPP 180
KPKVAPAPARPSGPSKALKLGAKGKEVDNFVDKLKSEGETIMSSSMGKRTSEATKMHAPP
Sbjct: 121 KPKVAPAPARPSGPSKALKLGAKGKEVDNFVDKLKSEGETIMSSSMGKRTSEATKMHAPP 180
Query: 181 INMESVHMKIEEKITLTCGRDGGLQNMELHGMIMLRISDDKYGRIRLHVENEDKKGVQLQ 240
INMESVHMKIEEKITLTCGRDGGLQNMELHGMIMLRISDDKYGRIRLHVENEDKKGVQLQ
Sbjct: 181 INMESVHMKIEEKITLTCGRDGGLQNMELHGMIMLRISDDKYGRIRLHVENEDKKGVQLQ 240
Query: 241 THPNVDKKLFTAESLIGLKNPEKSFPVNSDVGVLKWRLQTTEESFIPLTINCWPSESGNG 300
THPNVDKKLFTAESLIGLKNPEKSFPVNSDVGVLKWRLQTTEESFIPLTINCWPSESGNG
Sbjct: 241 THPNVDKKLFTAESLIGLKNPEKSFPVNSDVGVLKWRLQTTEESFIPLTINCWPSESGNG 300
Query: 301 CDVNIEYELQEDNLELNDVVITIPLPSGVGAPVIGEIDGEYRHDSRRNTLEWCLPVIDAK 360
CDVNIEYELQEDNLELNDVVITIPLPSGVGAPVIGEIDGEYRHDSRRNTLEWCLPVIDAK
Sbjct: 301 CDVNIEYELQEDNLELNDVVITIPLPSGVGAPVIGEIDGEYRHDSRRNTLEWCLPVIDAK 360
Query: 361 NKSGSLEFSIAGQPNDFFPVQVSFVSKKNYCNIQVTKVTQVDGNSPVRFSTETTFLVDKY 420
NKSGSLEFSIAGQPNDFFPVQVSFVSKKNYCNIQVTKVTQVDGNSPVRFSTETTFLVDKY
Sbjct: 361 NKSGSLEFSIAGQPNDFFPVQVSFVSKKNYCNIQVTKVTQVDGNSPVRFSTETTFLVDKY 420
Query: 421 EIL 423
EIL
Sbjct: 421 EIL 423
>gi|11863154 archain isoform 1 [Homo sapiens]
Length = 511
Score = 847 bits (2187), Expect = 0.0
Identities = 422/423 (99%), Positives = 423/423 (100%)
Query: 1 MIPEYCRALEENEISEHCFDLIFAFDEIVALGYRENVNLAQIRTFTEMDSHEEKVFRAVR 60
+IPEYCRALEENEISEHCFDLIFAFDEIVALGYRENVNLAQIRTFTEMDSHEEKVFRAVR
Sbjct: 89 VIPEYCRALEENEISEHCFDLIFAFDEIVALGYRENVNLAQIRTFTEMDSHEEKVFRAVR 148
Query: 61 ETQEREAKAEMRRKAKELQQARRDAERQGKKAPGFGGFGSSAVSGGSTAAMITETIIETD 120
ETQEREAKAEMRRKAKELQQARRDAERQGKKAPGFGGFGSSAVSGGSTAAMITETIIETD
Sbjct: 149 ETQEREAKAEMRRKAKELQQARRDAERQGKKAPGFGGFGSSAVSGGSTAAMITETIIETD 208
Query: 121 KPKVAPAPARPSGPSKALKLGAKGKEVDNFVDKLKSEGETIMSSSMGKRTSEATKMHAPP 180
KPKVAPAPARPSGPSKALKLGAKGKEVDNFVDKLKSEGETIMSSSMGKRTSEATKMHAPP
Sbjct: 209 KPKVAPAPARPSGPSKALKLGAKGKEVDNFVDKLKSEGETIMSSSMGKRTSEATKMHAPP 268
Query: 181 INMESVHMKIEEKITLTCGRDGGLQNMELHGMIMLRISDDKYGRIRLHVENEDKKGVQLQ 240
INMESVHMKIEEKITLTCGRDGGLQNMELHGMIMLRISDDKYGRIRLHVENEDKKGVQLQ
Sbjct: 269 INMESVHMKIEEKITLTCGRDGGLQNMELHGMIMLRISDDKYGRIRLHVENEDKKGVQLQ 328
Query: 241 THPNVDKKLFTAESLIGLKNPEKSFPVNSDVGVLKWRLQTTEESFIPLTINCWPSESGNG 300
THPNVDKKLFTAESLIGLKNPEKSFPVNSDVGVLKWRLQTTEESFIPLTINCWPSESGNG
Sbjct: 329 THPNVDKKLFTAESLIGLKNPEKSFPVNSDVGVLKWRLQTTEESFIPLTINCWPSESGNG 388
Query: 301 CDVNIEYELQEDNLELNDVVITIPLPSGVGAPVIGEIDGEYRHDSRRNTLEWCLPVIDAK 360
CDVNIEYELQEDNLELNDVVITIPLPSGVGAPVIGEIDGEYRHDSRRNTLEWCLPVIDAK
Sbjct: 389 CDVNIEYELQEDNLELNDVVITIPLPSGVGAPVIGEIDGEYRHDSRRNTLEWCLPVIDAK 448
Query: 361 NKSGSLEFSIAGQPNDFFPVQVSFVSKKNYCNIQVTKVTQVDGNSPVRFSTETTFLVDKY 420
NKSGSLEFSIAGQPNDFFPVQVSFVSKKNYCNIQVTKVTQVDGNSPVRFSTETTFLVDKY
Sbjct: 449 NKSGSLEFSIAGQPNDFFPVQVSFVSKKNYCNIQVTKVTQVDGNSPVRFSTETTFLVDKY 508
Query: 421 EIL 423
EIL
Sbjct: 509 EIL 511
>gi|22035679 AT rich interactive domain 4B isoform 2 [Homo sapiens]
Length = 1226
Score = 36.6 bits (83), Expect = 0.044
Identities = 49/210 (23%), Positives = 85/210 (40%), Gaps = 18/210 (8%)
Query: 114 ETIIETDKPKVAPAPARPSGPSKALKLGAKGKEVDNFVDKLKSEGETIM---SSSMGKRT 170
+T ++ KP++ R + LK G+ GK+ +K K++ M S+S
Sbjct: 724 DTTDKSSKPQIKRGKRRYCNTEECLKTGSPGKK----EEKAKNKESLCMENSSNSSSDED 779
Query: 171 SEATKMHAPPINMESVHMKIEEKITLTCGRDGGLQNMELHGMIMLRISDDKYGRIRLHVE 230
E TK P + ++ + K T G G + + +L SD++ R
Sbjct: 780 EEETKAKMTPTKKYN-GLEEKRKSLRTTGFYSGFSEVAEKRIKLLNNSDERLQNSRAKDR 838
Query: 231 NEDKKGVQLQTHPNVDKKLFTAESLIGLKNPEKSFPVNSDVGVLKWRLQTTEESFIPLTI 290
+ +Q Q K+LF+ +P P + GV + LQT E
Sbjct: 839 KDVWSSIQGQWPKKTLKELFSDSDTEAAASPPHPAP---EEGVAEESLQTVAEE-----E 890
Query: 291 NCWPS-ESGNGCDVNIEYE-LQEDNLELND 318
+C PS E VN++ + ++E +E+ND
Sbjct: 891 SCSPSVELEKPPPVNVDSKPIEEKTVEVND 920
>gi|22035677 AT rich interactive domain 4B isoform 1 [Homo sapiens]
Length = 1312
Score = 36.6 bits (83), Expect = 0.044
Identities = 49/210 (23%), Positives = 85/210 (40%), Gaps = 18/210 (8%)
Query: 114 ETIIETDKPKVAPAPARPSGPSKALKLGAKGKEVDNFVDKLKSEGETIM---SSSMGKRT 170
+T ++ KP++ R + LK G+ GK+ +K K++ M S+S
Sbjct: 810 DTTDKSSKPQIKRGKRRYCNTEECLKTGSPGKK----EEKAKNKESLCMENSSNSSSDED 865
Query: 171 SEATKMHAPPINMESVHMKIEEKITLTCGRDGGLQNMELHGMIMLRISDDKYGRIRLHVE 230
E TK P + ++ + K T G G + + +L SD++ R
Sbjct: 866 EEETKAKMTPTKKYN-GLEEKRKSLRTTGFYSGFSEVAEKRIKLLNNSDERLQNSRAKDR 924
Query: 231 NEDKKGVQLQTHPNVDKKLFTAESLIGLKNPEKSFPVNSDVGVLKWRLQTTEESFIPLTI 290
+ +Q Q K+LF+ +P P + GV + LQT E
Sbjct: 925 KDVWSSIQGQWPKKTLKELFSDSDTEAAASPPHPAP---EEGVAEESLQTVAEE-----E 976
Query: 291 NCWPS-ESGNGCDVNIEYE-LQEDNLELND 318
+C PS E VN++ + ++E +E+ND
Sbjct: 977 SCSPSVELEKPPPVNVDSKPIEEKTVEVND 1006
>gi|214010175 CLIP-associating protein 1 isoform 3 [Homo sapiens]
Length = 1471
Score = 35.8 bits (81), Expect = 0.075
Identities = 24/93 (25%), Positives = 41/93 (44%), Gaps = 9/93 (9%)
Query: 51 HEEKVFRAVRETQEREAKAEMRRKAKELQQARRDAERQ--------GKKAPGFGGFGSSA 102
+ E+++ ++R E K R + + +RD +++ G +P G G S
Sbjct: 1107 NSEEIYSSLRGVTEAIEKFSFRSQEDLNEPIKRDGKKECDIVSRDGGAASPATEGRGGSE 1166
Query: 103 VSGGSTAAMITETIIETDKPKVAPAP-ARPSGP 134
V GG TA +++ T P+ P P AR P
Sbjct: 1167 VEGGRTALDNKTSLLNTQPPRAFPGPRARDYNP 1199
>gi|214010173 CLIP-associating protein 1 isoform 2 [Homo sapiens]
Length = 1479
Score = 35.8 bits (81), Expect = 0.075
Identities = 24/93 (25%), Positives = 41/93 (44%), Gaps = 9/93 (9%)
Query: 51 HEEKVFRAVRETQEREAKAEMRRKAKELQQARRDAERQ--------GKKAPGFGGFGSSA 102
+ E+++ ++R E K R + + +RD +++ G +P G G S
Sbjct: 1115 NSEEIYSSLRGVTEAIEKFSFRSQEDLNEPIKRDGKKECDIVSRDGGAASPATEGRGGSE 1174
Query: 103 VSGGSTAAMITETIIETDKPKVAPAP-ARPSGP 134
V GG TA +++ T P+ P P AR P
Sbjct: 1175 VEGGRTALDNKTSLLNTQPPRAFPGPRARDYNP 1207
>gi|31563537 CLIP-associating protein 1 isoform 1 [Homo sapiens]
Length = 1538
Score = 35.8 bits (81), Expect = 0.075
Identities = 24/93 (25%), Positives = 41/93 (44%), Gaps = 9/93 (9%)
Query: 51 HEEKVFRAVRETQEREAKAEMRRKAKELQQARRDAERQ--------GKKAPGFGGFGSSA 102
+ E+++ ++R E K R + + +RD +++ G +P G G S
Sbjct: 1174 NSEEIYSSLRGVTEAIEKFSFRSQEDLNEPIKRDGKKECDIVSRDGGAASPATEGRGGSE 1233
Query: 103 VSGGSTAAMITETIIETDKPKVAPAP-ARPSGP 134
V GG TA +++ T P+ P P AR P
Sbjct: 1234 VEGGRTALDNKTSLLNTQPPRAFPGPRARDYNP 1266
>gi|21361272 myeloid/lymphoid or mixed-lineage leukemia (trithorax
homolog, Drosophila); translocated to, 1 [Homo sapiens]
Length = 559
Score = 34.7 bits (78), Expect = 0.17
Identities = 33/132 (25%), Positives = 52/132 (39%), Gaps = 13/132 (9%)
Query: 50 SHEEKVFRAVRETQEREAK-AEMRRKAKELQQARRDAERQGKKAPGFGGFGSSAVSGGST 108
S K + +E +ER K +E + +KEL++ + + + + G G +
Sbjct: 189 SKTSKPHKVTKEHRERPRKDSESKSSSKELEREQAKSSKDTSRKLGEGRLPKEEKAPPPK 248
Query: 109 AAM------ITETIIETDKPKVAPAPARPSGPSKALKLGAKGKEVDNFVDKLKSEGETIM 162
AA + ET +E+ PK P P P P + K A K K
Sbjct: 249 AAFKEPKMALKETKLESTSPKGGPPPPPPPPPRASSKRPATADSPKPSAKKQKK------ 302
Query: 163 SSSMGKRTSEAT 174
SSS G R++ T
Sbjct: 303 SSSKGSRSAPGT 314
>gi|112789562 interferon, gamma-inducible protein 16 [Homo sapiens]
Length = 729
Score = 34.3 bits (77), Expect = 0.22
Identities = 24/95 (25%), Positives = 44/95 (46%), Gaps = 1/95 (1%)
Query: 107 STAAMITETIIETDKPKVAPAPARPSGPSKALKLGAKGKEVDNFVDKLKSEGETIMSSSM 166
++ A T + ++T+ + P + +K K G KG +V + S MS++M
Sbjct: 105 TSPAPSTSSTVKTEGAEATPGAQKRKKSTKE-KAGPKGSKVSEEQTQPPSPAGAGMSTAM 163
Query: 167 GKRTSEATKMHAPPINMESVHMKIEEKITLTCGRD 201
G+ S T + APP + + + K K +T R+
Sbjct: 164 GRSPSPKTSLSAPPNSSSTENPKTVAKCQVTPRRN 198
>gi|52426743 cisplatin resistance-associated overexpressed protein
[Homo sapiens]
Length = 432
Score = 33.9 bits (76), Expect = 0.29
Identities = 15/52 (28%), Positives = 32/52 (61%)
Query: 41 QIRTFTEMDSHEEKVFRAVRETQEREAKAEMRRKAKELQQARRDAERQGKKA 92
++R TE +E++ + +E +ERE + E R+ +E ++ R + ER+ ++A
Sbjct: 233 KLRKRTEEPDRDERLKKEKQEREEREKEREREREERERKRRREEEEREKERA 284
>gi|19923485 cisplatin resistance-associated overexpressed protein
[Homo sapiens]
Length = 432
Score = 33.9 bits (76), Expect = 0.29
Identities = 15/52 (28%), Positives = 32/52 (61%)
Query: 41 QIRTFTEMDSHEEKVFRAVRETQEREAKAEMRRKAKELQQARRDAERQGKKA 92
++R TE +E++ + +E +ERE + E R+ +E ++ R + ER+ ++A
Sbjct: 233 KLRKRTEEPDRDERLKKEKQEREEREKEREREREERERKRRREEEEREKERA 284
>gi|149999378 inverted formin 2 isoform 2 [Homo sapiens]
Length = 1240
Score = 32.7 bits (73), Expect = 0.64
Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 6/57 (10%)
Query: 44 TFTEMDSHEEKVFRAVRETQERE---AKAEMRRKAKELQQARRDAERQGK---KAPG 94
TF+ M + + RA++E ++R+ AKAE R++ ++ARR GK K PG
Sbjct: 909 TFSTMKAFRDLFLRALKENKDRKEQAAKAERRKQQLAEEEARRPRGEDGKPVRKGPG 965
>gi|149999380 inverted formin 2 isoform 1 [Homo sapiens]
Length = 1249
Score = 32.7 bits (73), Expect = 0.64
Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 6/57 (10%)
Query: 44 TFTEMDSHEEKVFRAVRETQERE---AKAEMRRKAKELQQARRDAERQGK---KAPG 94
TF+ M + + RA++E ++R+ AKAE R++ ++ARR GK K PG
Sbjct: 909 TFSTMKAFRDLFLRALKENKDRKEQAAKAERRKQQLAEEEARRPRGEDGKPVRKGPG 965
>gi|61097912 nucleolar protein with MIF4G domain 1 [Homo sapiens]
Length = 860
Score = 32.7 bits (73), Expect = 0.64
Identities = 23/83 (27%), Positives = 40/83 (48%), Gaps = 11/83 (13%)
Query: 65 REAKAEMRRKAKELQQARRDAERQG-KKAPGFGGFGSSAVSGGSTAAMITETIIETDKPK 123
R+++ E+R++ + L++ARR G ++ PG GG + + G + + +
Sbjct: 79 RKSRKELRKEKRHLRKARRLQRTAGPEQGPGLGGRSGAEEASGHR---------QDTEER 129
Query: 124 VAPAPAR-PSGPSKALKLGAKGK 145
PAP+R PS P K K K
Sbjct: 130 ARPAPSRDPSPPRKPRPSRVKAK 152
>gi|92087055 PERQ amino acid rich, with GYF domain 1 [Homo sapiens]
Length = 1035
Score = 32.3 bits (72), Expect = 0.83
Identities = 16/50 (32%), Positives = 27/50 (54%)
Query: 39 LAQIRTFTEMDSHEEKVFRAVRETQEREAKAEMRRKAKELQQARRDAERQ 88
L Q++ + E RA RE +ER+ + E RR+ ++ +Q RR E +
Sbjct: 676 LEQLQLQHKFQERREVELRAKREEEERKRREEKRRQQQQEEQKRRQEEEE 725
>gi|55749531 splicing factor 3B subunit 2 [Homo sapiens]
Length = 895
Score = 32.0 bits (71), Expect = 1.1
Identities = 37/133 (27%), Positives = 54/133 (40%), Gaps = 17/133 (12%)
Query: 27 EIVALGYRENVNLAQIRTFTEMDSHEEKVFRAVRETQEREAKAEMRRKAKELQQAR-RDA 85
E VAL E + LAQ + M E + +E E + +R A L+Q R ++
Sbjct: 137 EPVALSEEERLKLAQQQAALLMQQEERAKQQGDHSLKEHELLEQQKRAAVLLEQERQQEI 196
Query: 86 ERQGKKAP----GFGGFGSSAVSGGSTAAMI-----TETIIETDKPKVAPAPARPSGPSK 136
+ G P G G G AA + T T++ P AP P RP GP
Sbjct: 197 AKMGTPVPRPPQDMGQIGVRTPLGPRVAAPVGPVGPTPTVL----PMGAPVP-RPRGPPP 251
Query: 137 ALKLGAKGKEVDN 149
G + +E+D+
Sbjct: 252 --PPGDENREMDD 262
>gi|167466173 heat shock 70kDa protein 1B [Homo sapiens]
Length = 641
Score = 31.2 bits (69), Expect = 1.9
Identities = 19/52 (36%), Positives = 23/52 (44%), Gaps = 3/52 (5%)
Query: 68 KAEMRRKAKELQQARR---DAERQGKKAPGFGGFGSSAVSGGSTAAMITETI 116
K E K KEL+Q QG PG GGFG+ GGS + E +
Sbjct: 589 KDEFEHKRKELEQVCNPIISGLYQGAGGPGPGGFGAQGPKGGSGSGPTIEEV 640
>gi|194248072 heat shock 70kDa protein 1A [Homo sapiens]
Length = 641
Score = 31.2 bits (69), Expect = 1.9
Identities = 19/52 (36%), Positives = 23/52 (44%), Gaps = 3/52 (5%)
Query: 68 KAEMRRKAKELQQARR---DAERQGKKAPGFGGFGSSAVSGGSTAAMITETI 116
K E K KEL+Q QG PG GGFG+ GGS + E +
Sbjct: 589 KDEFEHKRKELEQVCNPIISGLYQGAGGPGPGGFGAQGPKGGSGSGPTIEEV 640
>gi|5803145 ralA binding protein 1 [Homo sapiens]
Length = 655
Score = 31.2 bits (69), Expect = 1.9
Identities = 28/95 (29%), Positives = 45/95 (47%), Gaps = 10/95 (10%)
Query: 47 EMDSHEEKVFRAVRETQEREAKAEMRRKAKELQQARRDAERQGK--KAPGFGGFGSSAVS 104
E++ + +A+ E EREA E+R + + LQ R AE+Q + + P + G
Sbjct: 565 ELEIKNNHLNQAIHE--EREAIIELRVQLRLLQMQRAKAEQQAQEDEEPEWRGGAVQPPR 622
Query: 105 GGSTAAMITETIIETDKPKVAPAPARPSGPSKALK 139
G + E ++PK PA+PS PS+ K
Sbjct: 623 DG-----VLEPKAAKEQPKAGKEPAKPS-PSRDRK 651
>gi|55769537 zinc finger protein 658 [Homo sapiens]
Length = 1059
Score = 31.2 bits (69), Expect = 1.9
Identities = 35/127 (27%), Positives = 51/127 (40%), Gaps = 12/127 (9%)
Query: 159 ETIMSSSMGKRTSEATKMHAPPINMESVHMKIEEKITLTCGRDGGLQNMELHGMIMLRIS 218
E +S + + E K+ P N+E + ++ EKI+ C M L L IS
Sbjct: 101 EIFISDADKTLSKEGQKVLEKPFNLE-IAPELSEKISCKCDS----HRMNLPVASQLIIS 155
Query: 219 DDKYGRIRLHVENEDKKGVQLQTHPNVDKKLFTAESLIGLKNPEKSFPVNSDVGVLKWRL 278
+ KY R + N +K +QL +K E K+F D W+
Sbjct: 156 ERKYSRKKTEYMNVCEK-LQLDIK---HEKAHAEEKSYEHGENAKAFSYKKDQ---HWKF 208
Query: 279 QTTEESF 285
QT EESF
Sbjct: 209 QTLEESF 215
>gi|156766047 GRB10 interacting GYF protein 2 isoform c [Homo
sapiens]
Length = 1293
Score = 30.8 bits (68), Expect = 2.4
Identities = 13/39 (33%), Positives = 27/39 (69%)
Query: 53 EKVFRAVRETQEREAKAEMRRKAKELQQARRDAERQGKK 91
E RA RE +ER+ + E+RR+ +E+ + +++ ER+ ++
Sbjct: 737 EAEMRAKREEEERKRQEELRRQQEEILRRQQEEERKRRE 775
Score = 30.4 bits (67), Expect = 3.2
Identities = 14/54 (25%), Positives = 33/54 (61%), Gaps = 2/54 (3%)
Query: 59 VRETQEREAKAEMRRKAKELQQARRDAERQGKKAPGFGGFGSSAVSGGSTAAMI 112
+ E +ER+ + E RR+ +EL +A + ++Q ++ G+G+ + G+T +++
Sbjct: 946 LEEERERQLREEQRRQQRELMKALQQQQQQQQQK--LSGWGNVSKPSGTTKSLL 997
>gi|156766045 GRB10 interacting GYF protein 2 isoform a [Homo
sapiens]
Length = 1320
Score = 30.8 bits (68), Expect = 2.4
Identities = 13/39 (33%), Positives = 27/39 (69%)
Query: 53 EKVFRAVRETQEREAKAEMRRKAKELQQARRDAERQGKK 91
E RA RE +ER+ + E+RR+ +E+ + +++ ER+ ++
Sbjct: 764 EAEMRAKREEEERKRQEELRRQQEEILRRQQEEERKRRE 802
Score = 30.4 bits (67), Expect = 3.2
Identities = 14/54 (25%), Positives = 33/54 (61%), Gaps = 2/54 (3%)
Query: 59 VRETQEREAKAEMRRKAKELQQARRDAERQGKKAPGFGGFGSSAVSGGSTAAMI 112
+ E +ER+ + E RR+ +EL +A + ++Q ++ G+G+ + G+T +++
Sbjct: 973 LEEERERQLREEQRRQQRELMKALQQQQQQQQQK--LSGWGNVSKPSGTTKSLL 1024
>gi|156766043 GRB10 interacting GYF protein 2 isoform b [Homo
sapiens]
Length = 1299
Score = 30.8 bits (68), Expect = 2.4
Identities = 13/39 (33%), Positives = 27/39 (69%)
Query: 53 EKVFRAVRETQEREAKAEMRRKAKELQQARRDAERQGKK 91
E RA RE +ER+ + E+RR+ +E+ + +++ ER+ ++
Sbjct: 743 EAEMRAKREEEERKRQEELRRQQEEILRRQQEEERKRRE 781
Score = 30.4 bits (67), Expect = 3.2
Identities = 14/54 (25%), Positives = 33/54 (61%), Gaps = 2/54 (3%)
Query: 59 VRETQEREAKAEMRRKAKELQQARRDAERQGKKAPGFGGFGSSAVSGGSTAAMI 112
+ E +ER+ + E RR+ +EL +A + ++Q ++ G+G+ + G+T +++
Sbjct: 952 LEEERERQLREEQRRQQRELMKALQQQQQQQQQK--LSGWGNVSKPSGTTKSLL 1003
>gi|42476299 GRB10 interacting GYF protein 2 isoform b [Homo
sapiens]
Length = 1299
Score = 30.8 bits (68), Expect = 2.4
Identities = 13/39 (33%), Positives = 27/39 (69%)
Query: 53 EKVFRAVRETQEREAKAEMRRKAKELQQARRDAERQGKK 91
E RA RE +ER+ + E+RR+ +E+ + +++ ER+ ++
Sbjct: 743 EAEMRAKREEEERKRQEELRRQQEEILRRQQEEERKRRE 781
Score = 30.4 bits (67), Expect = 3.2
Identities = 14/54 (25%), Positives = 33/54 (61%), Gaps = 2/54 (3%)
Query: 59 VRETQEREAKAEMRRKAKELQQARRDAERQGKKAPGFGGFGSSAVSGGSTAAMI 112
+ E +ER+ + E RR+ +EL +A + ++Q ++ G+G+ + G+T +++
Sbjct: 952 LEEERERQLREEQRRQQRELMKALQQQQQQQQQK--LSGWGNVSKPSGTTKSLL 1003
>gi|24308069 zinc finger protein 521 [Homo sapiens]
Length = 1311
Score = 30.8 bits (68), Expect = 2.4
Identities = 26/76 (34%), Positives = 36/76 (47%), Gaps = 8/76 (10%)
Query: 124 VAPAPARPSGPSKALKLGAKGKEVDNFVDKLKSEGETIMSSSMGKRTSEATKMHAPPINM 183
V APARP+G + GAK +D+F LK+ +T++ K T P N
Sbjct: 623 VGGAPARPTGEYICNQCGAKYTSLDSFQTHLKTHLDTVLP----KLTCPQCNKEFP--NQ 676
Query: 184 ESV--HMKIEEKITLT 197
ES+ H+ I IT T
Sbjct: 677 ESLLKHVTIHFMITST 692
>gi|116235472 SH3-domain GRB2-like (endophilin) interacting protein
1 [Homo sapiens]
Length = 828
Score = 30.8 bits (68), Expect = 2.4
Identities = 29/131 (22%), Positives = 59/131 (45%), Gaps = 19/131 (14%)
Query: 270 DVGVLKWRLQTTEESFIPLTI----NCWPSESGNGCDVNIEYELQEDNLE----LNDVVI 321
+V +LK+++ PL + C PS + D+ I+Y+ D + LN+V
Sbjct: 670 NVDMLKYQVSAQGIQSTPLNLAVNWRCEPSST----DLRIDYKYNTDAMTTAVALNNVQF 725
Query: 322 TIPLPSGVGAPVIGEIDGEYRHDSRRNTLEWCLPVIDAKNKSGSL-----EFSIAGQPND 376
+P+ GV + + ++ + + W +P I K+++G + F ++ P+
Sbjct: 726 LVPIDGGV--TKLQAVLPPAVWNAEQQRILWKIPDISQKSENGGVGSLLARFQLSEGPSK 783
Query: 377 FFPVQVSFVSK 387
P+ V F S+
Sbjct: 784 PSPLVVQFTSE 794
>gi|16332372 cell division cycle 2-like 1 (PITSLRE proteins) isoform
9 [Homo sapiens]
Length = 771
Score = 30.8 bits (68), Expect = 2.4
Identities = 23/88 (26%), Positives = 46/88 (52%), Gaps = 7/88 (7%)
Query: 8 ALEENEISEHCFDLI-----FAFDEIVALGYRENVNLAQIRTFTEMDSHEEKVFRAVRET 62
+LEE E+ +HC ++ + ++ + E+ +LA I+ +M S +EKV E
Sbjct: 47 SLEEGELRDHCMEITIRNSPYRREDSMEDRGEEDDSLA-IKPPQQM-SRKEKVHHRKDEK 104
Query: 63 QEREAKAEMRRKAKELQQARRDAERQGK 90
++ + A ++ K +E ++ +R E Q K
Sbjct: 105 RKEKKHARVKEKEREHERRKRHREEQDK 132
Score = 29.6 bits (65), Expect = 5.4
Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 3/51 (5%)
Query: 34 RENVNLAQIRTFTEMDSHEEKVFRAVRETQEREAKAEMRRKAKELQQARRD 84
RE L Q+ E + + + RE +ERE +AE RRK +E ARR+
Sbjct: 152 RERDRLEQLERKRERERKMREQQKEQREQKERERRAEERRKERE---ARRE 199
>gi|16332370 cell division cycle 2-like 1 (PITSLRE proteins) isoform
8 [Homo sapiens]
Length = 780
Score = 30.8 bits (68), Expect = 2.4
Identities = 23/88 (26%), Positives = 46/88 (52%), Gaps = 7/88 (7%)
Query: 8 ALEENEISEHCFDLI-----FAFDEIVALGYRENVNLAQIRTFTEMDSHEEKVFRAVRET 62
+LEE E+ +HC ++ + ++ + E+ +LA I+ +M S +EKV E
Sbjct: 47 SLEEGELRDHCMEITIRNSPYRREDSMEDRGEEDDSLA-IKPPQQM-SRKEKVHHRKDEK 104
Query: 63 QEREAKAEMRRKAKELQQARRDAERQGK 90
++ + A ++ K +E ++ +R E Q K
Sbjct: 105 RKEKKHARVKEKEREHERRKRHREEQDK 132
>gi|133922600 splicing factor, arginine/serine-rich 16 [Homo
sapiens]
Length = 674
Score = 30.8 bits (68), Expect = 2.4
Identities = 25/106 (23%), Positives = 40/106 (37%), Gaps = 9/106 (8%)
Query: 66 EAKAEMRRKAKELQQARRDAERQGKKAPGFGGFGSSAVSGGSTAAMITETIIETDKPKVA 125
E+ +E R +++ R + K FG S + AA + + T KP
Sbjct: 306 ESSSESRSRSRSPTPGREE------KITFITSFGGSDEEAAAAAAAAAASGVTTGKP--- 356
Query: 126 PAPARPSGPSKALKLGAKGKEVDNFVDKLKSEGETIMSSSMGKRTS 171
PAP +P GP+ A+ + + S + SSS S
Sbjct: 357 PAPPQPGGPAPGRNASARRRSSSSSSSSSASRTSSSRSSSRSSSRS 402
>gi|122937219 F-box protein 41 [Homo sapiens]
Length = 936
Score = 30.8 bits (68), Expect = 2.4
Identities = 20/66 (30%), Positives = 35/66 (53%), Gaps = 5/66 (7%)
Query: 31 LGYRENVNLAQIRTFT--EMDSHEEKVFRAVRET---QEREAKAEMRRKAKELQQARRDA 85
+ Y E + +IR E+D E++ V + Q +AE+ RKA EL+ AR+++
Sbjct: 257 VAYEEGLARLKIRALEKLEVDRRLERLSEEVEQKIAGQVGRLQAELERKAAELETARQES 316
Query: 86 ERQGKK 91
R G++
Sbjct: 317 ARLGRE 322
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.314 0.132 0.380
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,459,361
Number of Sequences: 37866
Number of extensions: 702581
Number of successful extensions: 3144
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 75
Number of HSP's that attempted gapping in prelim test: 2953
Number of HSP's gapped (non-prelim): 287
length of query: 423
length of database: 18,247,518
effective HSP length: 105
effective length of query: 318
effective length of database: 14,271,588
effective search space: 4538364984
effective search space used: 4538364984
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.