Guide to the Human Genome
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Name: RFESD Sequence: fasta or formatted (210aa) NCBI GI: 197100550
Description:

Rieske (Fe-S) domain containing isoform 1

Not currently referenced in the text

Other entries for this name:
alt mRNA {210aa} Rieske (Fe-S) domain containing isoform 1
alt prot {157aa} Rieske (Fe-S) domain containing isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.8          8           1
 C cysteine            4.3          9           1
 D aspartate           6.7         14           2
 E glutamate           4.3          9           1
 F phenylalanine       4.8         10           1
 G glycine             6.7         14           2
 H histidine           4.8         10           1
 I isoleucine          6.2         13           1
 K lysine              7.6         16           2
 L leucine             8.1         17           2
 M methionine          1.9          4           1
 N asparagine          2.9          6           1
 P proline             5.2         11           1
 Q glutamine           1.9          4           1
 R arginine            4.3          9           1
 S serine             10.0         21           3
 T threonine           4.3          9           1
 V valine              6.7         14           2
 W tryptophan          1.0          2           1
 Y tyrosine            4.8         10           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   Rieske (Fe-S) domain containing isoform 1 
RFESD                 1.000   Rieske (Fe-S) domain containing isoform 1 
RFESD                 0.745   Rieske (Fe-S) domain containing isoform 2 
AIFM3                 0.033   apoptosis-inducing factor, mitochondrion-associated...
AIFM3                 0.033   apoptosis-inducing factor, mitochondrion-associated,...
AIFM3                 0.033   apoptosis-inducing factor, mitochondrion-associated,...
LOC100288476          0.010   PREDICTED: hypothetical protein XP_002343815 
GABBR1                0.010   gamma-aminobutyric acid (GABA) B receptor 1 isoform ...
ZNF462                0.007   zinc finger protein 462 
RSL24D1               0.007   ribosomal protein L24-like 
MYO6                  0.007   myosin VI 
ATG2B                 0.007   ATG2 autophagy related 2 homolog B 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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