Guide to the Human Genome
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Search of human proteins with 21389481

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|21389481 synaptoporin isoform 2 [Homo sapiens]
         (265 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|21389481 synaptoporin isoform 2 [Homo sapiens]                     540   e-154
gi|194018518 synaptoporin isoform 1 [Homo sapiens]                    523   e-149
gi|27764867 synaptophysin [Homo sapiens]                              309   1e-84
gi|105554421 mitsugumin 29 [Homo sapiens]                             222   2e-58
gi|33239443 synaptophysin-like 1 isoform b [Homo sapiens]             185   3e-47
gi|5803185 synaptophysin-like 1 isoform a [Homo sapiens]              185   3e-47
gi|253970506 Ewing sarcoma breakpoint region 1 isoform 5 [Homo s...    39   0.006
gi|253970504 Ewing sarcoma breakpoint region 1 isoform 4 [Homo s...    39   0.006
gi|253970502 Ewing sarcoma breakpoint region 1 isoform 3 [Homo s...    39   0.006
gi|253970500 Ewing sarcoma breakpoint region 1 isoform 1 [Homo s...    39   0.006
gi|4885225 Ewing sarcoma breakpoint region 1 isoform 2 [Homo sap...    39   0.006
gi|22035696 synaptogyrin 1 isoform 1a [Homo sapiens]                   35   0.052
gi|5032099 smoothened [Homo sapiens]                                   35   0.068
gi|4759202 synaptogyrin 2 [Homo sapiens]                               35   0.088
gi|56682966 transforming growth factor, beta receptor III [Homo ...    33   0.20 
gi|62122917 filaggrin family member 2 [Homo sapiens]                   33   0.34 
gi|34734079 frizzled 6 [Homo sapiens]                                  32   0.57 
gi|22035700 synaptogyrin 1 isoform 1c [Homo sapiens]                   32   0.57 
gi|22035698 synaptogyrin 1 isoform 1b [Homo sapiens]                   32   0.57 
gi|11321597 kinase insert domain receptor precursor [Homo sapiens]     32   0.75 
gi|57864582 hornerin [Homo sapiens]                                    31   0.98 
gi|6631112 synaptogyrin 3 [Homo sapiens]                               31   0.98 
gi|27262624 ATP-binding cassette, sub-family A , member 5 [Homo ...    30   1.7  
gi|27262626 ATP-binding cassette, sub-family A , member 5 [Homo ...    30   1.7  
gi|4826734 fusion (involved in t(12;16) in malignant liposarcoma...    30   2.2  
gi|239753327 PREDICTED: zinc finger protein 806 [Homo sapiens]         30   2.8  
gi|239747893 PREDICTED: zinc finger protein 806 [Homo sapiens]         30   2.8  
gi|239741794 PREDICTED: zinc finger protein 806 [Homo sapiens]         30   2.8  
gi|9961250 ATP-binding cassette, subfamily B, member 4 isoform B...    29   3.7  
gi|9961252 ATP-binding cassette, subfamily B, member 4 isoform C...    29   3.7  

>gi|21389481 synaptoporin isoform 2 [Homo sapiens]
          Length = 265

 Score =  540 bits (1391), Expect = e-154
 Identities = 265/265 (100%), Positives = 265/265 (100%)

Query: 1   MCMVIFAPLFAIFAFATCGGYSGGLRLSVDCVNKTESNLSIDIAFAYPFRLHQVTFEVPT 60
           MCMVIFAPLFAIFAFATCGGYSGGLRLSVDCVNKTESNLSIDIAFAYPFRLHQVTFEVPT
Sbjct: 1   MCMVIFAPLFAIFAFATCGGYSGGLRLSVDCVNKTESNLSIDIAFAYPFRLHQVTFEVPT 60

Query: 61  CEGKERQKLALIGDSSSSAEFFVTVAVFAFLYSLAATVVYIFFQNKYRENNRGPLIDFIV 120
           CEGKERQKLALIGDSSSSAEFFVTVAVFAFLYSLAATVVYIFFQNKYRENNRGPLIDFIV
Sbjct: 61  CEGKERQKLALIGDSSSSAEFFVTVAVFAFLYSLAATVVYIFFQNKYRENNRGPLIDFIV 120

Query: 121 TVVFSFLWLVGSSAWAKGLSDVKVATDPKEVLLLMSACKQPSNKCMAIHSPVMSSLNTSV 180
           TVVFSFLWLVGSSAWAKGLSDVKVATDPKEVLLLMSACKQPSNKCMAIHSPVMSSLNTSV
Sbjct: 121 TVVFSFLWLVGSSAWAKGLSDVKVATDPKEVLLLMSACKQPSNKCMAIHSPVMSSLNTSV 180

Query: 181 VFGFLNFILWAGNIWFVFKETGWHSSGQRYLSDPMEKHSSSYNQGGYNQDSYGSSSGYSQ 240
           VFGFLNFILWAGNIWFVFKETGWHSSGQRYLSDPMEKHSSSYNQGGYNQDSYGSSSGYSQ
Sbjct: 181 VFGFLNFILWAGNIWFVFKETGWHSSGQRYLSDPMEKHSSSYNQGGYNQDSYGSSSGYSQ 240

Query: 241 QASLGPTSDEFGQQPTGPTSFTNQI 265
           QASLGPTSDEFGQQPTGPTSFTNQI
Sbjct: 241 QASLGPTSDEFGQQPTGPTSFTNQI 265


>gi|194018518 synaptoporin isoform 1 [Homo sapiens]
          Length = 285

 Score =  523 bits (1347), Expect = e-149
 Identities = 257/257 (100%), Positives = 257/257 (100%)

Query: 9   LFAIFAFATCGGYSGGLRLSVDCVNKTESNLSIDIAFAYPFRLHQVTFEVPTCEGKERQK 68
           LFAIFAFATCGGYSGGLRLSVDCVNKTESNLSIDIAFAYPFRLHQVTFEVPTCEGKERQK
Sbjct: 29  LFAIFAFATCGGYSGGLRLSVDCVNKTESNLSIDIAFAYPFRLHQVTFEVPTCEGKERQK 88

Query: 69  LALIGDSSSSAEFFVTVAVFAFLYSLAATVVYIFFQNKYRENNRGPLIDFIVTVVFSFLW 128
           LALIGDSSSSAEFFVTVAVFAFLYSLAATVVYIFFQNKYRENNRGPLIDFIVTVVFSFLW
Sbjct: 89  LALIGDSSSSAEFFVTVAVFAFLYSLAATVVYIFFQNKYRENNRGPLIDFIVTVVFSFLW 148

Query: 129 LVGSSAWAKGLSDVKVATDPKEVLLLMSACKQPSNKCMAIHSPVMSSLNTSVVFGFLNFI 188
           LVGSSAWAKGLSDVKVATDPKEVLLLMSACKQPSNKCMAIHSPVMSSLNTSVVFGFLNFI
Sbjct: 149 LVGSSAWAKGLSDVKVATDPKEVLLLMSACKQPSNKCMAIHSPVMSSLNTSVVFGFLNFI 208

Query: 189 LWAGNIWFVFKETGWHSSGQRYLSDPMEKHSSSYNQGGYNQDSYGSSSGYSQQASLGPTS 248
           LWAGNIWFVFKETGWHSSGQRYLSDPMEKHSSSYNQGGYNQDSYGSSSGYSQQASLGPTS
Sbjct: 209 LWAGNIWFVFKETGWHSSGQRYLSDPMEKHSSSYNQGGYNQDSYGSSSGYSQQASLGPTS 268

Query: 249 DEFGQQPTGPTSFTNQI 265
           DEFGQQPTGPTSFTNQI
Sbjct: 269 DEFGQQPTGPTSFTNQI 285


>gi|27764867 synaptophysin [Homo sapiens]
          Length = 313

 Score =  309 bits (792), Expect = 1e-84
 Identities = 161/281 (57%), Positives = 190/281 (67%), Gaps = 26/281 (9%)

Query: 9   LFAIFAFATCGGYSGGLRLSVDCVNKTESNLSIDIAFAYPFRLHQVTFEVPTCEGKERQK 68
           +FAIFAFATCG YSG L+LSVDC NKTES+LSI++ F YPFRLHQV F+ PTC G    K
Sbjct: 35  VFAIFAFATCGSYSGELQLSVDCANKTESDLSIEVEFEYPFRLHQVYFDAPTCRGGTT-K 93

Query: 69  LALIGDSSSSAEFFVTVAVFAFLYSLAATVVYIFFQNKYRENNRGPLIDFIVTVVFSFLW 128
           + L+GD SSSAEFFVTVAVFAFLYS+ A   YIF QNKYRENN+GP++DF+ T VF+F+W
Sbjct: 94  VFLVGDYSSSAEFFVTVAVFAFLYSMGALATYIFLQNKYRENNKGPMLDFLATAVFAFMW 153

Query: 129 LVGSSAWAKGLSDVKVATDPKEVLLLMSACKQPSNKCMAIHSPVMSSLNTSVVFGFLNFI 188
           LV SSAWAKGLSDVK+ATDP+ ++  M  C+Q  N C  +  PV S LNTSVVFGFLN +
Sbjct: 154 LVSSSAWAKGLSDVKMATDPENIIKEMPVCRQTGNTCKELRDPVTSGLNTSVVFGFLNLV 213

Query: 189 LWAGNIWFVFKETGWHSSGQRYLSDPMEKH---SSSYNQGGYN--------QDSYGSSSG 237
           LW GN+WFVFKETGW +   R      EK      +Y   GY         QDSYG   G
Sbjct: 214 LWVGNLWFVFKETGWAAPFLRAPPGAPEKQPAPGDAYGDAGYGQGPGGYGPQDSYGPQGG 273

Query: 238 Y---------SQQASLGPTSDEFGQQPTG----PTSFTNQI 265
           Y         S  +  GP  D +GQQ  G    PTSF+NQ+
Sbjct: 274 YQPDYGQPAGSGGSGYGPQGD-YGQQGYGPQGAPTSFSNQM 313


>gi|105554421 mitsugumin 29 [Homo sapiens]
          Length = 272

 Score =  222 bits (566), Expect = 2e-58
 Identities = 106/201 (52%), Positives = 135/201 (67%), Gaps = 1/201 (0%)

Query: 9   LFAIFAFATCGGYSGGLRLSVDCVNKTESNLSIDIAFAYPFRLHQVTFEVPTCEGKERQK 68
           LFAIFAF +CG YSG     V C N+ +   SI +AF YPFRLH++ +E+P C+ +   K
Sbjct: 44  LFAIFAFGSCGSYSGETGAMVRCNNEAKDVSSIIVAFGYPFRLHRIQYEMPLCDEESSSK 103

Query: 69  -LALIGDSSSSAEFFVTVAVFAFLYSLAATVVYIFFQNKYRENNRGPLIDFIVTVVFSFL 127
            + L+GD S+ AEFFVT+ +F+F Y++AA V+Y+ F N Y EN R PL+DF VTV F+F 
Sbjct: 104 TMHLMGDFSAPAEFFVTLGIFSFFYTMAALVIYLRFHNLYTENKRFPLVDFCVTVSFTFF 163

Query: 128 WLVGSSAWAKGLSDVKVATDPKEVLLLMSACKQPSNKCMAIHSPVMSSLNTSVVFGFLNF 187
           WLV ++AW KGL+DVK AT P  +   MS C      C A  +P M   N SV+FGF+NF
Sbjct: 164 WLVAAAAWGKGLTDVKGATRPSSLTAAMSVCHGEEAVCSAGATPSMGLANISVLFGFINF 223

Query: 188 ILWAGNIWFVFKETGWHSSGQ 208
            LWAGN WFVFKET WH  GQ
Sbjct: 224 FLWAGNCWFVFKETPWHGQGQ 244


>gi|33239443 synaptophysin-like 1 isoform b [Homo sapiens]
          Length = 241

 Score =  185 bits (470), Expect = 3e-47
 Identities = 96/220 (43%), Positives = 138/220 (62%), Gaps = 15/220 (6%)

Query: 11  AIFAFATCGGYSGGLRLSVDCVNKTESNLSIDIAFAYPFRLHQVTFEVPT----CEGKER 66
           +IFAFATCGG+ G   + V+C      N ++   F YPFRL++ +F+ P     C+   +
Sbjct: 26  SIFAFATCGGFKGQTEIQVNCPPAVTENKTVTATFGYPFRLNEASFQPPPGVNICDVNWK 85

Query: 67  QKLALIGDSSSSAEFFVTVAVFAFLYSLAATVVYIFFQNKYRENNRGPLIDFIVTVVFSF 126
             + LIGD SSSA+F+VT AVF FLY +AA ++Y+ + + Y ++ + P+IDF+VT+V +F
Sbjct: 86  DYV-LIGDYSSSAQFYVTFAVFVFLYCIAALLLYVGYTSLYLDSRKLPMIDFVVTLVATF 144

Query: 127 LWLVGSSAWAKGLSDVKVATDPKEVLLLMSACKQPSNKCMAIHSPVMSSLNTSVVFGFLN 186
           LWLV +SAWAK L+D+K+AT    ++  +  CK+ +  C       M SLN SV+FGFLN
Sbjct: 145 LWLVSTSAWAKALTDIKIATG-HNIIDELPPCKKKAVLCYFGSVTSMGSLNVSVIFGFLN 203

Query: 187 FILWAGNIWFVFKETGWHSSGQRYLSDPMEKHSSSYNQGG 226
            ILW GN WFV+KET  HS             S+ ++QGG
Sbjct: 204 MILWGGNAWFVYKETSLHSPSNT---------SAPHSQGG 234


>gi|5803185 synaptophysin-like 1 isoform a [Homo sapiens]
          Length = 259

 Score =  185 bits (470), Expect = 3e-47
 Identities = 96/220 (43%), Positives = 138/220 (62%), Gaps = 15/220 (6%)

Query: 11  AIFAFATCGGYSGGLRLSVDCVNKTESNLSIDIAFAYPFRLHQVTFEVPT----CEGKER 66
           +IFAFATCGG+ G   + V+C      N ++   F YPFRL++ +F+ P     C+   +
Sbjct: 44  SIFAFATCGGFKGQTEIQVNCPPAVTENKTVTATFGYPFRLNEASFQPPPGVNICDVNWK 103

Query: 67  QKLALIGDSSSSAEFFVTVAVFAFLYSLAATVVYIFFQNKYRENNRGPLIDFIVTVVFSF 126
             + LIGD SSSA+F+VT AVF FLY +AA ++Y+ + + Y ++ + P+IDF+VT+V +F
Sbjct: 104 DYV-LIGDYSSSAQFYVTFAVFVFLYCIAALLLYVGYTSLYLDSRKLPMIDFVVTLVATF 162

Query: 127 LWLVGSSAWAKGLSDVKVATDPKEVLLLMSACKQPSNKCMAIHSPVMSSLNTSVVFGFLN 186
           LWLV +SAWAK L+D+K+AT    ++  +  CK+ +  C       M SLN SV+FGFLN
Sbjct: 163 LWLVSTSAWAKALTDIKIATG-HNIIDELPPCKKKAVLCYFGSVTSMGSLNVSVIFGFLN 221

Query: 187 FILWAGNIWFVFKETGWHSSGQRYLSDPMEKHSSSYNQGG 226
            ILW GN WFV+KET  HS             S+ ++QGG
Sbjct: 222 MILWGGNAWFVYKETSLHSPSNT---------SAPHSQGG 252


>gi|253970506 Ewing sarcoma breakpoint region 1 isoform 5 [Homo
           sapiens]
          Length = 354

 Score = 38.5 bits (88), Expect = 0.006
 Identities = 22/46 (47%), Positives = 30/46 (65%), Gaps = 4/46 (8%)

Query: 220 SSYNQGGYNQ-DSYGSSSGYSQQASLGPTSDEFGQQPTGPTSFTNQ 264
           +SY+Q  Y+Q ++YG  S Y QQ+S G  S  +GQQP  PTS+  Q
Sbjct: 201 TSYDQSSYSQQNTYGQPSSYGQQSSYGQQS-SYGQQP--PTSYPPQ 243


>gi|253970504 Ewing sarcoma breakpoint region 1 isoform 4 [Homo
           sapiens]
          Length = 600

 Score = 38.5 bits (88), Expect = 0.006
 Identities = 22/46 (47%), Positives = 30/46 (65%), Gaps = 4/46 (8%)

Query: 220 SSYNQGGYNQ-DSYGSSSGYSQQASLGPTSDEFGQQPTGPTSFTNQ 264
           +SY+Q  Y+Q ++YG  S Y QQ+S G  S  +GQQP  PTS+  Q
Sbjct: 145 TSYDQSSYSQQNTYGQPSSYGQQSSYGQQS-SYGQQP--PTSYPPQ 187


>gi|253970502 Ewing sarcoma breakpoint region 1 isoform 3 [Homo
           sapiens]
          Length = 655

 Score = 38.5 bits (88), Expect = 0.006
 Identities = 22/46 (47%), Positives = 30/46 (65%), Gaps = 4/46 (8%)

Query: 220 SSYNQGGYNQ-DSYGSSSGYSQQASLGPTSDEFGQQPTGPTSFTNQ 264
           +SY+Q  Y+Q ++YG  S Y QQ+S G  S  +GQQP  PTS+  Q
Sbjct: 201 TSYDQSSYSQQNTYGQPSSYGQQSSYGQQS-SYGQQP--PTSYPPQ 243


>gi|253970500 Ewing sarcoma breakpoint region 1 isoform 1 [Homo
           sapiens]
          Length = 661

 Score = 38.5 bits (88), Expect = 0.006
 Identities = 22/46 (47%), Positives = 30/46 (65%), Gaps = 4/46 (8%)

Query: 220 SSYNQGGYNQ-DSYGSSSGYSQQASLGPTSDEFGQQPTGPTSFTNQ 264
           +SY+Q  Y+Q ++YG  S Y QQ+S G  S  +GQQP  PTS+  Q
Sbjct: 207 TSYDQSSYSQQNTYGQPSSYGQQSSYGQQS-SYGQQP--PTSYPPQ 249


>gi|4885225 Ewing sarcoma breakpoint region 1 isoform 2 [Homo
           sapiens]
          Length = 656

 Score = 38.5 bits (88), Expect = 0.006
 Identities = 22/46 (47%), Positives = 30/46 (65%), Gaps = 4/46 (8%)

Query: 220 SSYNQGGYNQ-DSYGSSSGYSQQASLGPTSDEFGQQPTGPTSFTNQ 264
           +SY+Q  Y+Q ++YG  S Y QQ+S G  S  +GQQP  PTS+  Q
Sbjct: 201 TSYDQSSYSQQNTYGQPSSYGQQSSYGQQS-SYGQQP--PTSYPPQ 243


>gi|22035696 synaptogyrin 1 isoform 1a [Homo sapiens]
          Length = 233

 Score = 35.4 bits (80), Expect = 0.052
 Identities = 42/200 (21%), Positives = 74/200 (37%), Gaps = 28/200 (14%)

Query: 65  ERQKLALIGDSSSSAEFFVTVAVFAFLYSLAATVVYIFFQ--NKYRENNRGPLIDFIVTV 122
           E ++  +   + ++  + V V V AFL  L    + ++F   +  ++  +  L D  V+ 
Sbjct: 54  EGEEFCIYNRNPNACSYGVAVGVLAFLTCLLYLALDVYFPQISSVKDRKKAVLSDIGVSA 113

Query: 123 VFSFLWLVGSSAWAKGLSDVKVATDPKEVLLLMSACKQPSNKCMAIHSPVMSSLNTSVVF 182
            ++FLW VG       L++    + PK+          P N+          +   ++ F
Sbjct: 114 FWAFLWFVGFCY----LANQWQVSKPKD---------NPLNE-------GTDAARAAIAF 153

Query: 183 GFLNFILWAGNIWFVFKETGWHSSGQRYLSDPME-KHSSSYNQGGY----NQDSYGSSSG 237
            F +   WAG     F+     +    +  D M+    SS     Y      D  G    
Sbjct: 154 SFFSIFTWAGQAVLAFQRYQIGADSALFSQDYMDPSQDSSMPYAPYVEPTGPDPAGMGGT 213

Query: 238 YSQQASLGPTSDEFGQQPTG 257
           Y Q A+   T  + G Q  G
Sbjct: 214 YQQPANTFDTEPQ-GYQSQG 232


>gi|5032099 smoothened [Homo sapiens]
          Length = 787

 Score = 35.0 bits (79), Expect = 0.068
 Identities = 32/124 (25%), Positives = 53/124 (42%), Gaps = 17/124 (13%)

Query: 85  VAVFAFLYSLAATVVYIFFQNKYRENNRGP-LIDFIVTVVFSFLWLVGSSAWAKGLSDVK 143
           +A F  +  L        F   +R +NR P +I F V   F     VGS  W     D  
Sbjct: 234 IAAFGAVTGLCTLFTLATFVADWRNSNRYPAVILFYVNACF----FVGSIGWLAQFMDGA 289

Query: 144 VATDPKEVLLLMSACKQPSNKCMAIHSPVMS-SLNTSVVFGFLNFILWAGNIWFVFKETG 202
                +E++     C+  ++  M +  P  + +L+  ++F  + + L AG +WFV     
Sbjct: 290 ----RREIV-----CR--ADGTMRLGEPTSNETLSCVIIFVIVYYALMAGVVWFVVLTYA 338

Query: 203 WHSS 206
           WH+S
Sbjct: 339 WHTS 342


>gi|4759202 synaptogyrin 2 [Homo sapiens]
          Length = 224

 Score = 34.7 bits (78), Expect = 0.088
 Identities = 34/177 (19%), Positives = 70/177 (39%), Gaps = 34/177 (19%)

Query: 64  KERQKLALIGDSSSSAEFFVTVAVFAFLYSLAATVVYIFFQNKYRENNRGPLI--DFIVT 121
           + +Q   +   +  +  +   + V AFL S    VV  +F       +R  L+  D + +
Sbjct: 53  ESKQMYCVFNRNEDACRYGSAIGVLAFLASAFFLVVDAYFPQISNATDRKYLVIGDLLFS 112

Query: 122 VVFSFLWLVG----SSAWAKGLSDVKVATDPKEVLLLMSACKQPSNKCMAIHSPVMSSLN 177
            +++FLW VG    ++ WA         T+PK+VL+                     S+ 
Sbjct: 113 ALWTFLWFVGFCFLTNQWA--------VTNPKDVLV------------------GADSVR 146

Query: 178 TSVVFGFLNFILWA--GNIWFVFKETGWHSSGQRYLSDPMEKHSSSYNQGGYNQDSY 232
            ++ F F +   W    ++ +   + G     Q Y+    + +++  +  G + D+Y
Sbjct: 147 AAITFSFFSIFSWGVLASLAYQRYKAGVDDFIQNYVDPTPDPNTAYASYPGASVDNY 203


>gi|56682966 transforming growth factor, beta receptor III [Homo
           sapiens]
          Length = 851

 Score = 33.5 bits (75), Expect = 0.20
 Identities = 35/117 (29%), Positives = 55/117 (47%), Gaps = 10/117 (8%)

Query: 129 LVGSSAWAKGLSDVKVATDPKEVLLLMSACKQ--PSNK-CMAIHSPVMSSLNTSVVFG-- 183
           L  S  WA  + + K  T P  V+   +  K+  PS K    I  P+   L+T  V G  
Sbjct: 733 LDASIIWAM-MQNKKTFTKPLAVIHHEAESKEKGPSMKEPNPISPPIFHGLDTLTVMGIA 791

Query: 184 FLNFILWA---GNIWFVFKETGWHSSGQRY-LSDPMEKHSSSYNQGGYNQDSYGSSS 236
           F  F++ A   G +W+++  TG  +  Q+   S P  ++SS+ +  G  Q +  SSS
Sbjct: 792 FAAFVIGALLTGALWYIYSHTGETAGRQQVPTSPPASENSSAAHSIGSTQSTPCSSS 848


>gi|62122917 filaggrin family member 2 [Homo sapiens]
          Length = 2391

 Score = 32.7 bits (73), Expect = 0.34
 Identities = 22/63 (34%), Positives = 27/63 (42%), Gaps = 2/63 (3%)

Query: 202 GWHSSGQRYLSDPMEKHSSSYNQGGYNQ--DSYGSSSGYSQQASLGPTSDEFGQQPTGPT 259
           G H SG    S   +  SSS    G+ Q   S G  SG+ Q  S    S  FGQ  TG  
Sbjct: 846 GQHGSGSSQSSGYGQHGSSSGQTSGFGQHRSSSGQYSGFGQHGSGSGQSSGFGQHGTGSG 905

Query: 260 SFT 262
            ++
Sbjct: 906 QYS 908



 Score = 32.0 bits (71), Expect = 0.57
 Identities = 22/58 (37%), Positives = 25/58 (43%), Gaps = 2/58 (3%)

Query: 202  GWHSSGQRYLSDPMEKHSSSYNQGGYNQ--DSYGSSSGYSQQASLGPTSDEFGQQPTG 257
            G H SG    S   +  SSS    G+ Q   S G  SG+ Q  S    S  FGQ  TG
Sbjct: 1000 GQHGSGSSQSSGYGQHGSSSGQTTGFGQHRSSSGQYSGFGQHGSGSDQSSGFGQHGTG 1057



 Score = 31.6 bits (70), Expect = 0.75
 Identities = 24/63 (38%), Positives = 28/63 (44%), Gaps = 5/63 (7%)

Query: 202 GWHSSGQRYLSDPMEKHSSSYNQGGYNQDSYGS--SSGYSQQASLGPTSDEFGQQPTGPT 259
           G H SG    S    +H S   Q  Y Q S GS  SSGY Q  S    +  FGQ  +G +
Sbjct: 594 GQHGSGSGQ-SSGFGQHESRSGQSSYGQHSSGSSQSSGYGQHGS--RQTSGFGQHGSGSS 650

Query: 260 SFT 262
             T
Sbjct: 651 QST 653



 Score = 31.6 bits (70), Expect = 0.75
 Identities = 24/63 (38%), Positives = 28/63 (44%), Gaps = 5/63 (7%)

Query: 202 GWHSSGQRYLSDPMEKHSSSYNQGGYNQDSYGS--SSGYSQQASLGPTSDEFGQQPTGPT 259
           G H SG    S    +H S   Q  Y Q S GS  SSGY Q  S    +  FGQ  +G +
Sbjct: 746 GQHGSGSGQ-SSGFGQHESRSGQSSYGQHSSGSSQSSGYGQHGS--RQTSGFGQHGSGSS 802

Query: 260 SFT 262
             T
Sbjct: 803 QST 805



 Score = 31.6 bits (70), Expect = 0.75
 Identities = 22/58 (37%), Positives = 26/58 (44%), Gaps = 2/58 (3%)

Query: 202 GWHSSGQRYLSDPMEKHSSSYNQGGYNQDSYGS--SSGYSQQASLGPTSDEFGQQPTG 257
           G H SG    S   +  SSS    G+ Q   GS  SSG+ Q  S    S  FGQ  +G
Sbjct: 923 GQHGSGSSQSSGYGQHGSSSGQTFGFGQHRSGSGQSSGFGQHGSGSGQSSGFGQHESG 980



 Score = 30.8 bits (68), Expect = 1.3
 Identities = 21/54 (38%), Positives = 24/54 (44%), Gaps = 3/54 (5%)

Query: 202  GWHSSGQRYLSDPMEKHSSSYNQGGYNQDSYGSS--SGYSQQASLGPTSDEFGQ 253
            G H SG    S    +H S  +Q  Y Q   GSS  SGY Q  S    +  FGQ
Sbjct: 975  GQHESGSGK-SSGFGQHESRSSQSNYGQHGSGSSQSSGYGQHGSSSGQTTGFGQ 1027



 Score = 30.4 bits (67), Expect = 1.7
 Identities = 20/54 (37%), Positives = 23/54 (42%), Gaps = 3/54 (5%)

Query: 202 GWHSSGQRYLSDPMEKHSSSYNQGGYNQDSYGSS--SGYSQQASLGPTSDEFGQ 253
           G H SG    S    +H S      Y Q  +GSS  SGY Q  S    +  FGQ
Sbjct: 669 GQHVSGSGQ-SSGFGQHESRSGHSSYGQHGFGSSQSSGYGQHGSSSGQTSGFGQ 721



 Score = 30.4 bits (67), Expect = 1.7
 Identities = 21/58 (36%), Positives = 26/58 (44%), Gaps = 2/58 (3%)

Query: 202  GWHSSGQRYLSDPMEKHSSSYNQGGYNQDSYGS--SSGYSQQASLGPTSDEFGQQPTG 257
            G H SG    S   +  S+S    G+ Q   GS  SSG+ Q  S    S  FGQ  +G
Sbjct: 1077 GQHGSGSSQSSGYGQHGSNSGQTSGFGQHRPGSGQSSGFGQYGSGSGQSSGFGQHGSG 1134



 Score = 28.9 bits (63), Expect = 4.8
 Identities = 21/64 (32%), Positives = 27/64 (42%), Gaps = 3/64 (4%)

Query: 202  GWHSSGQRYLSDPMEKHSSSYNQGGYNQDSYGSS--SGYSQQASLGPTSDEFGQQPTGPT 259
            G H SG    S    +H     Q  Y Q   GSS  SG  Q  S    +  FGQ  +G  
Sbjct: 1129 GQHGSGTGK-SSGFAQHEYRSGQSSYGQHGTGSSQSSGCGQHESGSGPTTSFGQHVSGSD 1187

Query: 260  SFTN 263
            +F++
Sbjct: 1188 NFSS 1191



 Score = 28.5 bits (62), Expect = 6.3
 Identities = 19/54 (35%), Positives = 23/54 (42%), Gaps = 2/54 (3%)

Query: 202 GWHSSGQRYLSDPMEKHSSSYNQGGYNQDSY--GSSSGYSQQASLGPTSDEFGQ 253
           G H SG    S   +  S S    G+ Q     G SSG+ Q  S+   S  FGQ
Sbjct: 480 GQHGSGSGQSSGFGQCGSGSGQSSGFGQHGSVSGQSSGFGQHGSVSGQSSGFGQ 533



 Score = 28.1 bits (61), Expect = 8.3
 Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 1/42 (2%)

Query: 217 KHSSSYNQ-GGYNQDSYGSSSGYSQQASLGPTSDEFGQQPTG 257
           +HSS  +Q  GY Q     +SG+ Q  S    S  FGQ  +G
Sbjct: 620 QHSSGSSQSSGYGQHGSRQTSGFGQHGSGSSQSTGFGQYGSG 661



 Score = 28.1 bits (61), Expect = 8.3
 Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 1/42 (2%)

Query: 217 KHSSSYNQ-GGYNQDSYGSSSGYSQQASLGPTSDEFGQQPTG 257
           +HSS  +Q  GY Q     +SG+ Q  S    S  FGQ  +G
Sbjct: 772 QHSSGSSQSSGYGQHGSRQTSGFGQHGSGSSQSTGFGQYGSG 813


>gi|34734079 frizzled 6 [Homo sapiens]
          Length = 706

 Score = 32.0 bits (71), Expect = 0.57
 Identities = 31/145 (21%), Positives = 63/145 (43%), Gaps = 31/145 (21%)

Query: 81  FFVTVAVFAFLYSLAATVVYIFFQNKYRENNRGPLIDF-----IVTVVFSFLWLVGSSAW 135
           F  TV++F    +L   + ++    ++R   R P+I +     IV++++   +L+G S  
Sbjct: 201 FIGTVSIFCLCATLFTFLTFLIDVRRFRYPER-PIIYYSVCYSIVSLMYFIGFLLGDS-- 257

Query: 136 AKGLSDVKVATDPKEVLLLMSACKQPSNKCMAIHSPVMSSLNTS--VVFGFLNFILWAGN 193
                               +AC +   K     + V+ S N +  V+F  L F   AG 
Sbjct: 258 --------------------TACNKADEKLELGDTVVLGSQNKACTVLFMLLYFFTMAGT 297

Query: 194 IWFVFKETGWH-SSGQRYLSDPMEK 217
           +W+V     W  ++G+++  + +E+
Sbjct: 298 VWWVILTITWFLAAGRKWSCEAIEQ 322


>gi|22035700 synaptogyrin 1 isoform 1c [Homo sapiens]
          Length = 192

 Score = 32.0 bits (71), Expect = 0.57
 Identities = 17/69 (24%), Positives = 34/69 (49%), Gaps = 2/69 (2%)

Query: 65  ERQKLALIGDSSSSAEFFVTVAVFAFLYSLAATVVYIFFQ--NKYRENNRGPLIDFIVTV 122
           E ++  +   + ++  + V V V AFL  L    + ++F   +  ++  +  L D  V+ 
Sbjct: 55  EGEEFCIYNRNPNACSYGVAVGVLAFLTCLLYLALDVYFPQISSVKDRKKAVLSDIGVSA 114

Query: 123 VFSFLWLVG 131
            ++FLW VG
Sbjct: 115 FWAFLWFVG 123


>gi|22035698 synaptogyrin 1 isoform 1b [Homo sapiens]
          Length = 191

 Score = 32.0 bits (71), Expect = 0.57
 Identities = 17/69 (24%), Positives = 34/69 (49%), Gaps = 2/69 (2%)

Query: 65  ERQKLALIGDSSSSAEFFVTVAVFAFLYSLAATVVYIFFQ--NKYRENNRGPLIDFIVTV 122
           E ++  +   + ++  + V V V AFL  L    + ++F   +  ++  +  L D  V+ 
Sbjct: 54  EGEEFCIYNRNPNACSYGVAVGVLAFLTCLLYLALDVYFPQISSVKDRKKAVLSDIGVSA 113

Query: 123 VFSFLWLVG 131
            ++FLW VG
Sbjct: 114 FWAFLWFVG 122


>gi|11321597 kinase insert domain receptor precursor [Homo sapiens]
          Length = 1356

 Score = 31.6 bits (70), Expect = 0.75
 Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 4/51 (7%)

Query: 22  SGGLRLSVDCVNKTESNLSIDIAFAYPFRLHQ----VTFEVPTCEGKERQK 68
           S G +L ++C  +TE N+ ID  + YP   HQ    V  ++ T  G E +K
Sbjct: 237 SVGEKLVLNCTARTELNVGIDFNWEYPSSKHQHKKLVNRDLKTQSGSEMKK 287


>gi|57864582 hornerin [Homo sapiens]
          Length = 2850

 Score = 31.2 bits (69), Expect = 0.98
 Identities = 21/54 (38%), Positives = 24/54 (44%), Gaps = 2/54 (3%)

Query: 202 GWHSSGQRYLSDPMEKHSSSYNQGGYNQ--DSYGSSSGYSQQASLGPTSDEFGQ 253
           G H SG    S      S S    G++Q   S G SSGYSQ  S    S  +GQ
Sbjct: 206 GQHGSGSGQSSSNDTHGSGSGQSSGFSQHKSSSGQSSGYSQHGSGSGHSSGYGQ 259



 Score = 30.4 bits (67), Expect = 1.7
 Identities = 22/60 (36%), Positives = 26/60 (43%), Gaps = 7/60 (11%)

Query: 201  TGWHSSGQRYLSDPMEKHSSSYNQGGYNQDSYGSSSGYSQQASLGPTSDEFGQQPTGPTS 260
            +GW SS       P E  SS  +  G+ +   G SSGY Q  S    S   GQ   G TS
Sbjct: 1501 SGWSSS-----RGPYESGSSHSSGLGHRESRSGQSSGYGQHGSSSGHSSTHGQH--GSTS 1553



 Score = 29.3 bits (64), Expect = 3.7
 Identities = 23/61 (37%), Positives = 25/61 (40%), Gaps = 4/61 (6%)

Query: 202 GWHSSGQRYLSDPMEKHSSSYNQGGYNQDSYGS--SSGYSQQASLGPTSDEFGQQPTGPT 259
           G H SG  Y        S S    G+ Q   GS  SSGYS+  S    S   GQ   G T
Sbjct: 323 GQHGSGSSYSYSRGHYESGSGQTSGFGQHESGSGQSSGYSKHGSGSGHSSSQGQH--GST 380

Query: 260 S 260
           S
Sbjct: 381 S 381



 Score = 29.3 bits (64), Expect = 3.7
 Identities = 19/53 (35%), Positives = 20/53 (37%), Gaps = 3/53 (5%)

Query: 202 GWHSSGQRYLSDPMEKHSSSYNQGGYNQDSYGSSSGYSQQASLGPTSDEFGQQ 254
           G H SG    S      S S    G+ Q   GS  GYSQ    G  S  F  Q
Sbjct: 792 GQHGSGTSCSSSCGHYESGSGQASGFGQHESGSGQGYSQH---GSASGHFSSQ 841



 Score = 28.9 bits (63), Expect = 4.8
 Identities = 23/60 (38%), Positives = 26/60 (43%), Gaps = 7/60 (11%)

Query: 201  TGWHSSGQRYLSDPMEKHSSSYNQGGYNQDSYGSSSGYSQQASLGPTSDEFGQQPTGPTS 260
            +GW SS   Y S     HSS     G+ +   G SSGY Q  S    S   GQ   G TS
Sbjct: 1031 SGWSSSRGPYESG--SGHSSGL---GHRESRSGQSSGYGQHGSSSGHSSTHGQH--GSTS 1083



 Score = 28.9 bits (63), Expect = 4.8
 Identities = 23/60 (38%), Positives = 26/60 (43%), Gaps = 7/60 (11%)

Query: 201  TGWHSSGQRYLSDPMEKHSSSYNQGGYNQDSYGSSSGYSQQASLGPTSDEFGQQPTGPTS 260
            +GW SS   Y S     HSS     G+ +   G SSGY Q  S    S   GQ   G TS
Sbjct: 2441 SGWSSSRGPYESG--SGHSSGL---GHRESRSGQSSGYGQHGSSSGHSSTHGQH--GSTS 2493



 Score = 28.5 bits (62), Expect = 6.3
 Identities = 19/57 (33%), Positives = 24/57 (42%), Gaps = 2/57 (3%)

Query: 204 HSSGQRYLSDPMEKHSSSYNQGGYNQDSYGSSSGYSQQASLGPTSDEFGQQPTGPTS 260
           + SG+     P E  S   +  G+ +   G SSGY Q  S    S   GQ   G TS
Sbjct: 563 YGSGRSSSRGPYESGSGHSSGLGHQESRSGQSSGYGQHGSSSGHSSTHGQH--GSTS 617



 Score = 28.5 bits (62), Expect = 6.3
 Identities = 18/45 (40%), Positives = 20/45 (44%), Gaps = 2/45 (4%)

Query: 201  TGWHSSGQRYLSDPMEKHSSSYNQGGYNQDSYGS--SSGYSQQAS 243
            +G H SG    S      SSS+   GY Q   GS  SS Y Q  S
Sbjct: 1858 SGRHGSGSGQSSGFGHHESSSWQSSGYTQHGSGSGHSSSYEQHGS 1902



 Score = 28.5 bits (62), Expect = 6.3
 Identities = 20/53 (37%), Positives = 23/53 (43%), Gaps = 5/53 (9%)

Query: 201  TGWHSSGQRYLSDPMEKHSSSYNQGGYNQDSYGSSSGYSQQASLGPTSDEFGQ 253
            +GW SS   Y S     HSS     G+ +   G SSGY Q  S    S   GQ
Sbjct: 1971 SGWSSSRGPYESG--SGHSSGL---GHRESRSGQSSGYGQHGSSSGHSSTHGQ 2018



 Score = 28.5 bits (62), Expect = 6.3
 Identities = 18/45 (40%), Positives = 20/45 (44%), Gaps = 2/45 (4%)

Query: 201  TGWHSSGQRYLSDPMEKHSSSYNQGGYNQDSYGS--SSGYSQQAS 243
            +G H SG    S      SSS+   GY Q   GS  SS Y Q  S
Sbjct: 2328 SGRHGSGSGQSSGFGHHESSSWQSSGYTQHGSGSGHSSSYEQHGS 2372


>gi|6631112 synaptogyrin 3 [Homo sapiens]
          Length = 229

 Score = 31.2 bits (69), Expect = 0.98
 Identities = 18/59 (30%), Positives = 32/59 (54%), Gaps = 2/59 (3%)

Query: 75  SSSSAEFFVTVAVFAFLYSLAATVVYIFFQ--NKYRENNRGPLIDFIVTVVFSFLWLVG 131
           ++ +  F V + + AFL   A  ++ + FQ  +  R+  R  L+D   + ++SFLW VG
Sbjct: 64  NAGACRFGVALGLGAFLACAAFLLLDVRFQQISSVRDRRRAVLLDLGFSGLWSFLWFVG 122


>gi|27262624 ATP-binding cassette, sub-family A , member 5 [Homo
           sapiens]
          Length = 1642

 Score = 30.4 bits (67), Expect = 1.7
 Identities = 16/74 (21%), Positives = 35/74 (47%), Gaps = 10/74 (13%)

Query: 83  VTVAVFAFLYSLAATVVYIFFQNKYRENNRGPLIDFIVTVVFSFLWLVGSSAWAKGLSDV 142
           + + +  FLY L++    +     ++++    +++F VTV F F+          GL  +
Sbjct: 297 IVIFLLFFLYGLSSVFFALMLTPLFKKSKHVGIVEFFVTVAFGFI----------GLMII 346

Query: 143 KVATDPKEVLLLMS 156
            + + PK ++ L S
Sbjct: 347 LIESFPKSLVWLFS 360


>gi|27262626 ATP-binding cassette, sub-family A , member 5 [Homo
           sapiens]
          Length = 1642

 Score = 30.4 bits (67), Expect = 1.7
 Identities = 16/74 (21%), Positives = 35/74 (47%), Gaps = 10/74 (13%)

Query: 83  VTVAVFAFLYSLAATVVYIFFQNKYRENNRGPLIDFIVTVVFSFLWLVGSSAWAKGLSDV 142
           + + +  FLY L++    +     ++++    +++F VTV F F+          GL  +
Sbjct: 297 IVIFLLFFLYGLSSVFFALMLTPLFKKSKHVGIVEFFVTVAFGFI----------GLMII 346

Query: 143 KVATDPKEVLLLMS 156
            + + PK ++ L S
Sbjct: 347 LIESFPKSLVWLFS 360


>gi|4826734 fusion (involved in t(12;16) in malignant liposarcoma)
           [Homo sapiens]
          Length = 526

 Score = 30.0 bits (66), Expect = 2.2
 Identities = 20/52 (38%), Positives = 22/52 (42%), Gaps = 1/52 (1%)

Query: 206 SGQRYLSDPMEKHSSSYNQGGYNQDSYGSSSGYSQQASLGPTSDEFGQQPTG 257
           S Q Y       +S S +  GY Q SY SS G SQ    G  S   G   TG
Sbjct: 29  SSQPYGQQSYSGYSQSTDTSGYGQSSY-SSYGQSQNTGYGTQSTPQGYGSTG 79



 Score = 28.9 bits (63), Expect = 4.8
 Identities = 19/55 (34%), Positives = 21/55 (38%), Gaps = 2/55 (3%)

Query: 202 GWHSSGQRYLSDPMEKHSSSYNQGGYNQDSYGS--SSGYSQQASLGPTSDEFGQQ 254
           G  SS   Y   P    +S          SYG   S  YSQQ S G     +GQQ
Sbjct: 92  GQQSSYPGYGQQPAPSSTSGSYGSSSQSSSYGQPQSGSYSQQPSYGGQQQSYGQQ 146


>gi|239753327 PREDICTED: zinc finger protein 806 [Homo sapiens]
          Length = 544

 Score = 29.6 bits (65), Expect = 2.8
 Identities = 17/52 (32%), Positives = 23/52 (44%), Gaps = 6/52 (11%)

Query: 212 SDPMEKHSSSYNQGGYNQDSYGSSSGYSQ------QASLGPTSDEFGQQPTG 257
           +DP   HS+   +  Y  D YG +   SQ      +   G T  EF + PTG
Sbjct: 199 TDPRVHHSTHLGEKSYKCDQYGKNLSQSQYLIVHCKTHSGETPYEFHEWPTG 250


>gi|239747893 PREDICTED: zinc finger protein 806 [Homo sapiens]
          Length = 589

 Score = 29.6 bits (65), Expect = 2.8
 Identities = 17/52 (32%), Positives = 23/52 (44%), Gaps = 6/52 (11%)

Query: 212 SDPMEKHSSSYNQGGYNQDSYGSSSGYSQ------QASLGPTSDEFGQQPTG 257
           +DP   HS+   +  Y  D YG +   SQ      +   G T  EF + PTG
Sbjct: 244 TDPRVHHSTHLGEKSYKCDQYGKNLSQSQYLIVHCKTHSGETPYEFHEWPTG 295


>gi|239741794 PREDICTED: zinc finger protein 806 [Homo sapiens]
          Length = 589

 Score = 29.6 bits (65), Expect = 2.8
 Identities = 17/52 (32%), Positives = 23/52 (44%), Gaps = 6/52 (11%)

Query: 212 SDPMEKHSSSYNQGGYNQDSYGSSSGYSQ------QASLGPTSDEFGQQPTG 257
           +DP   HS+   +  Y  D YG +   SQ      +   G T  EF + PTG
Sbjct: 244 TDPRVHHSTHLGEKSYKCDQYGKNLSQSQYLIVHCKTHSGETPYEFHEWPTG 295


>gi|9961250 ATP-binding cassette, subfamily B, member 4 isoform B
            [Homo sapiens]
          Length = 1286

 Score = 29.3 bits (64), Expect = 3.7
 Identities = 23/71 (32%), Positives = 35/71 (49%), Gaps = 2/71 (2%)

Query: 33   NKTESNLSI-DIAFAYPFRLHQVTFEVPTCEGKERQKLALIGDSSSSAEFFVTVAVFAFL 91
            +K E N++  ++ F YP R +    +  + E K+ Q LAL+G SS   +  V   +  F 
Sbjct: 1028 DKFEGNITFNEVVFNYPTRANVPVLQGLSLEVKKGQTLALVG-SSGCGKSTVVQLLERFY 1086

Query: 92   YSLAATVVYIF 102
              LA TV   F
Sbjct: 1087 DPLAGTVFVDF 1097


>gi|9961252 ATP-binding cassette, subfamily B, member 4 isoform C
            [Homo sapiens]
          Length = 1232

 Score = 29.3 bits (64), Expect = 3.7
 Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 2/68 (2%)

Query: 33   NKTESNLSI-DIAFAYPFRLHQVTFEVPTCEGKERQKLALIGDSSSSAEFFVTVAVFAFL 91
            +K E N++  ++ F YP R +    +  + E K+ Q LAL+G SS   +  V   +  F 
Sbjct: 981  DKFEGNITFNEVVFNYPTRANVPVLQGLSLEVKKGQTLALVG-SSGCGKSTVVQLLERFY 1039

Query: 92   YSLAATVV 99
              LA TV+
Sbjct: 1040 DPLAGTVL 1047


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.321    0.134    0.413 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,905,985
Number of Sequences: 37866
Number of extensions: 401104
Number of successful extensions: 1205
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 20
Number of HSP's that attempted gapping in prelim test: 1041
Number of HSP's gapped (non-prelim): 147
length of query: 265
length of database: 18,247,518
effective HSP length: 100
effective length of query: 165
effective length of database: 14,460,918
effective search space: 2386051470
effective search space used: 2386051470
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 61 (28.1 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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