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Search of human proteins with 11386175
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|11386175 protein phosphatase 1, regulatory (inhibitor)
subunit 11 [Homo sapiens]
(126 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|11386175 protein phosphatase 1, regulatory (inhibitor) subuni... 271 1e-73
gi|239755323 PREDICTED: hypothetical protein XP_002344527 [Homo ... 38 0.002
gi|239749816 PREDICTED: hypothetical protein [Homo sapiens] 38 0.002
gi|239744106 PREDICTED: hypothetical protein XP_002343034 [Homo ... 38 0.002
gi|122937271 WAS protein homolog associated with actin, golgi me... 37 0.004
gi|158420731 chromodomain helicase DNA binding protein 3 isoform... 36 0.007
gi|114205399 cyclic nucleotide gated channel beta 1 isoform a [H... 35 0.015
gi|154813195 DENN/MADD domain containing 2A [Homo sapiens] 35 0.020
gi|195947369 junction-mediating and regulatory protein [Homo sap... 33 0.044
gi|4505195 mitogen-activated protein kinase kinase kinase 11 [Ho... 33 0.044
gi|169201757 PREDICTED: chromosome 10 open reading frame 134 [Ho... 33 0.058
gi|169201331 PREDICTED: chromosome 10 open reading frame 134 [Ho... 33 0.058
gi|239744207 PREDICTED: chromosome 10 open reading frame 134 [Ho... 33 0.058
gi|151301053 RNA binding motif protein 33 [Homo sapiens] 33 0.058
gi|126090663 zinc finger homeodomain 4 [Homo sapiens] 33 0.058
gi|118766337 zinc finger protein of the cerebellum 5 [Homo sapiens] 33 0.058
gi|62945417 dystrophia myotonica-containing WD repeat motif prot... 33 0.058
gi|55741677 SET domain containing 1A [Homo sapiens] 33 0.075
gi|155030232 proline, glutamic acid and leucine rich protein 1 [... 33 0.075
gi|169636435 caudal type homeobox 2 [Homo sapiens] 32 0.098
gi|169167066 PREDICTED: hypothetical protein [Homo sapiens] 32 0.098
gi|113416187 PREDICTED: hypothetical protein [Homo sapiens] 32 0.098
gi|113415691 PREDICTED: hypothetical protein [Homo sapiens] 32 0.098
gi|19718731 bromodomain-containing protein 4 isoform long [Homo ... 32 0.098
gi|149158696 HLA-B associated transcript-3 isoform b [Homo sapiens] 32 0.098
gi|18375632 HLA-B associated transcript-3 isoform b [Homo sapiens] 32 0.098
gi|18375630 HLA-B associated transcript-3 isoform b [Homo sapiens] 32 0.098
gi|149158692 HLA-B associated transcript-3 isoform a [Homo sapiens] 32 0.098
gi|47132519 Ras association and pleckstrin homology domains 1 is... 32 0.098
gi|32455273 WNK lysine deficient protein kinase 2 [Homo sapiens] 32 0.098
>gi|11386175 protein phosphatase 1, regulatory (inhibitor) subunit
11 [Homo sapiens]
Length = 126
Score = 271 bits (692), Expect = 1e-73
Identities = 126/126 (100%), Positives = 126/126 (100%)
Query: 1 MAEAGAGLSETVTETTVTVTTEPENRSLTIKLRKRKPEKKVEWTSDTVDNEHMGRRSSKC 60
MAEAGAGLSETVTETTVTVTTEPENRSLTIKLRKRKPEKKVEWTSDTVDNEHMGRRSSKC
Sbjct: 1 MAEAGAGLSETVTETTVTVTTEPENRSLTIKLRKRKPEKKVEWTSDTVDNEHMGRRSSKC 60
Query: 61 CCIYEKPRAFGESSTESDEEEEEGCGHTHCVRGHRKGRRRATLGPTPTTPPQPPDPSQPP 120
CCIYEKPRAFGESSTESDEEEEEGCGHTHCVRGHRKGRRRATLGPTPTTPPQPPDPSQPP
Sbjct: 61 CCIYEKPRAFGESSTESDEEEEEGCGHTHCVRGHRKGRRRATLGPTPTTPPQPPDPSQPP 120
Query: 121 PGPMQH 126
PGPMQH
Sbjct: 121 PGPMQH 126
>gi|239755323 PREDICTED: hypothetical protein XP_002344527 [Homo
sapiens]
Length = 152
Score = 38.1 bits (87), Expect = 0.002
Identities = 22/64 (34%), Positives = 25/64 (39%), Gaps = 17/64 (26%)
Query: 77 SDEEEEEGCGHTHCVRGHRKGRRRATLG-----------------PTPTTPPQPPDPSQP 119
+DE+ G G C G R+ R R G P P P PP PSQP
Sbjct: 20 ADEDMAVGAGSRLCPAGRRRRRGRGCFGSSGGRKSALCALLARFLPFPRPAPLPPPPSQP 79
Query: 120 PPGP 123
PP P
Sbjct: 80 PPPP 83
>gi|239749816 PREDICTED: hypothetical protein [Homo sapiens]
Length = 152
Score = 38.1 bits (87), Expect = 0.002
Identities = 22/64 (34%), Positives = 25/64 (39%), Gaps = 17/64 (26%)
Query: 77 SDEEEEEGCGHTHCVRGHRKGRRRATLG-----------------PTPTTPPQPPDPSQP 119
+DE+ G G C G R+ R R G P P P PP PSQP
Sbjct: 20 ADEDMAVGAGSRLCPAGRRRRRGRGCFGSSGGRKSALCALLARFLPFPRPAPLPPPPSQP 79
Query: 120 PPGP 123
PP P
Sbjct: 80 PPPP 83
>gi|239744106 PREDICTED: hypothetical protein XP_002343034 [Homo
sapiens]
Length = 152
Score = 38.1 bits (87), Expect = 0.002
Identities = 22/64 (34%), Positives = 25/64 (39%), Gaps = 17/64 (26%)
Query: 77 SDEEEEEGCGHTHCVRGHRKGRRRATLG-----------------PTPTTPPQPPDPSQP 119
+DE+ G G C G R+ R R G P P P PP PSQP
Sbjct: 20 ADEDMAVGAGSRLCPAGRRRRRGRGCFGSSGGRKSALCALLARFLPFPRPAPLPPPPSQP 79
Query: 120 PPGP 123
PP P
Sbjct: 80 PPPP 83
>gi|122937271 WAS protein homolog associated with actin, golgi
membranes and microtubules [Homo sapiens]
Length = 809
Score = 37.0 bits (84), Expect = 0.004
Identities = 14/32 (43%), Positives = 17/32 (53%)
Query: 94 HRKGRRRATLGPTPTTPPQPPDPSQPPPGPMQ 125
H K +L P P PP PP P PPP P++
Sbjct: 629 HSKSSEELSLPPPPPPPPPPPPPPPPPPPPLR 660
>gi|158420731 chromodomain helicase DNA binding protein 3 isoform 3
[Homo sapiens]
Length = 2059
Score = 36.2 bits (82), Expect = 0.007
Identities = 20/55 (36%), Positives = 27/55 (49%), Gaps = 5/55 (9%)
Query: 74 STESDEEEEEGCGHTHCVRGHRKGRRRAT-----LGPTPTTPPQPPDPSQPPPGP 123
+ + D+EE++ G GH +GR R + L P P PP P P PPP P
Sbjct: 38 AADEDDEEDDDEGVLGRGPGHDRGRDRHSPPGCHLFPPPPPPPPPLPPPPPPPPP 92
>gi|114205399 cyclic nucleotide gated channel beta 1 isoform a [Homo
sapiens]
Length = 1251
Score = 35.0 bits (79), Expect = 0.015
Identities = 21/59 (35%), Positives = 28/59 (47%), Gaps = 13/59 (22%)
Query: 72 ESSTESDEEEEEGCG----HTHCVRGHRKGRRRATLGPTPTTPPQPP--DPSQPPPGPM 124
++ + D + EEG HTH + AT P P TPP+PP PS PPP +
Sbjct: 1154 QAKSSQDVKGEEGSAAPDQHTH-------PKEAATDPPAPRTPPEPPGSPPSSPPPASL 1205
>gi|154813195 DENN/MADD domain containing 2A [Homo sapiens]
Length = 1009
Score = 34.7 bits (78), Expect = 0.020
Identities = 40/130 (30%), Positives = 58/130 (44%), Gaps = 21/130 (16%)
Query: 2 AEAGAGLSETV---TETTVTVTTEP---ENRSLTIKL-RKRKPEKKVEWTSDTVDNEHMG 54
AEAG+ L E + + + V+ P E R T +L RK + W +++N + G
Sbjct: 195 AEAGSTLPENLGGGSGSEVSQRVHPSDLEGREPTPELVEDRKGSCRRPWDR-SLENVYRG 253
Query: 55 RRSSKCCCIYE---KPRAFGESSTESDEEEEEGCGHTHCVRGHRKGRRRATLGPTPTTPP 111
S KPR + + E D++ + G G RK +R L P P+ PP
Sbjct: 254 SEGSPTKPFINPLPKPRRTFKHAGEGDKDGKPGIGF-------RKEKRN--LPPLPSLPP 304
Query: 112 QPPDPSQPPP 121
PP PS PPP
Sbjct: 305 -PPLPSSPPP 313
>gi|195947369 junction-mediating and regulatory protein [Homo
sapiens]
Length = 988
Score = 33.5 bits (75), Expect = 0.044
Identities = 13/22 (59%), Positives = 14/22 (63%)
Query: 103 LGPTPTTPPQPPDPSQPPPGPM 124
L PTP PP PP P PPP P+
Sbjct: 807 LPPTPPPPPPPPPPPPPPPLPV 828
Score = 33.1 bits (74), Expect = 0.058
Identities = 12/19 (63%), Positives = 12/19 (63%)
Query: 105 PTPTTPPQPPDPSQPPPGP 123
P P TPP PP P PPP P
Sbjct: 806 PLPPTPPPPPPPPPPPPPP 824
Score = 27.3 bits (59), Expect = 3.2
Identities = 10/22 (45%), Positives = 12/22 (54%)
Query: 102 TLGPTPTTPPQPPDPSQPPPGP 123
T+ P P+ P P P PPP P
Sbjct: 799 TINPLPSPLPPTPPPPPPPPPP 820
>gi|4505195 mitogen-activated protein kinase kinase kinase 11 [Homo
sapiens]
Length = 847
Score = 33.5 bits (75), Expect = 0.044
Identities = 16/31 (51%), Positives = 20/31 (64%), Gaps = 6/31 (19%)
Query: 97 GRRRATLGPTPTTPPQP---PDPSQPPPGPM 124
GR R G +PTTPP P P P++PPP P+
Sbjct: 668 GRER---GESPTTPPTPTPAPCPTEPPPSPL 695
>gi|169201757 PREDICTED: chromosome 10 open reading frame 134 [Homo
sapiens]
Length = 626
Score = 33.1 bits (74), Expect = 0.058
Identities = 24/81 (29%), Positives = 34/81 (41%), Gaps = 12/81 (14%)
Query: 41 VEWTSDTVDNEHMGRRSSKCCCIYEKPRAFGESSTESDEEEEEGCGHTHCVRGHRKGRRR 100
V+W + T+ +E G S + R F S + D+ +E K
Sbjct: 136 VQWVNSTITHELQGMAPSDQAEVDHLLRIFFASKVQEDKGRKE----------LEKSLEY 185
Query: 101 ATLGPTPTTPPQPPDPSQPPP 121
+T+ PTP PP PP P PPP
Sbjct: 186 STV-PTPL-PPVPPPPPPPPP 204
>gi|169201331 PREDICTED: chromosome 10 open reading frame 134 [Homo
sapiens]
Length = 626
Score = 33.1 bits (74), Expect = 0.058
Identities = 24/81 (29%), Positives = 34/81 (41%), Gaps = 12/81 (14%)
Query: 41 VEWTSDTVDNEHMGRRSSKCCCIYEKPRAFGESSTESDEEEEEGCGHTHCVRGHRKGRRR 100
V+W + T+ +E G S + R F S + D+ +E K
Sbjct: 136 VQWVNSTITHELQGMAPSDQAEVDHLLRIFFASKVQEDKGRKE----------LEKSLEY 185
Query: 101 ATLGPTPTTPPQPPDPSQPPP 121
+T+ PTP PP PP P PPP
Sbjct: 186 STV-PTPL-PPVPPPPPPPPP 204
>gi|239744207 PREDICTED: chromosome 10 open reading frame 134 [Homo
sapiens]
Length = 626
Score = 33.1 bits (74), Expect = 0.058
Identities = 24/81 (29%), Positives = 34/81 (41%), Gaps = 12/81 (14%)
Query: 41 VEWTSDTVDNEHMGRRSSKCCCIYEKPRAFGESSTESDEEEEEGCGHTHCVRGHRKGRRR 100
V+W + T+ +E G S + R F S + D+ +E K
Sbjct: 136 VQWVNSTITHELQGMAPSDQAEVDHLLRIFFASKVQEDKGRKE----------LEKSLEY 185
Query: 101 ATLGPTPTTPPQPPDPSQPPP 121
+T+ PTP PP PP P PPP
Sbjct: 186 STV-PTPL-PPVPPPPPPPPP 204
>gi|151301053 RNA binding motif protein 33 [Homo sapiens]
Length = 1170
Score = 33.1 bits (74), Expect = 0.058
Identities = 27/104 (25%), Positives = 37/104 (35%), Gaps = 21/104 (20%)
Query: 18 TVTTEPENRSLTIKLRKRKPEKKVEWTSDTVDNEHMGRRSSKCCCIYEKPRAFGESSTES 77
T+ E ++ ++ +R+ + K + GRR C R G+ ES
Sbjct: 245 TLELSAEAKAALLEFEERERQHK----QGRYSSRRGGRRGGPLMC-----RGVGDQRRES 295
Query: 78 DEEEEEGCGHTHCVRGHRKGRRRATLGPTPTTPPQPPDPSQPPP 121
E RG K R A L P PQ P P PPP
Sbjct: 296 TE------------RGRMKDHRPALLPTQPPVVPQAPPPPPPPP 327
>gi|126090663 zinc finger homeodomain 4 [Homo sapiens]
Length = 3571
Score = 33.1 bits (74), Expect = 0.058
Identities = 12/19 (63%), Positives = 12/19 (63%)
Query: 105 PTPTTPPQPPDPSQPPPGP 123
P PT PP PP P PPP P
Sbjct: 1993 PPPTPPPPPPPPPPPPPPP 2011
Score = 33.1 bits (74), Expect = 0.058
Identities = 12/19 (63%), Positives = 12/19 (63%)
Query: 105 PTPTTPPQPPDPSQPPPGP 123
PTP PP PP P PPP P
Sbjct: 1995 PTPPPPPPPPPPPPPPPPP 2013
Score = 30.8 bits (68), Expect = 0.29
Identities = 11/19 (57%), Positives = 11/19 (57%)
Query: 105 PTPTTPPQPPDPSQPPPGP 123
P P PP PP P PPP P
Sbjct: 1997 PPPPPPPPPPPPPPPPPPP 2015
Score = 30.8 bits (68), Expect = 0.29
Identities = 11/19 (57%), Positives = 11/19 (57%)
Query: 105 PTPTTPPQPPDPSQPPPGP 123
P P PP PP P PPP P
Sbjct: 1998 PPPPPPPPPPPPPPPPPPP 2016
Score = 29.6 bits (65), Expect = 0.64
Identities = 11/21 (52%), Positives = 11/21 (52%)
Query: 105 PTPTTPPQPPDPSQPPPGPMQ 125
P P PP PP P PP P Q
Sbjct: 2001 PPPPPPPPPPPPPPPPSAPPQ 2021
Score = 29.3 bits (64), Expect = 0.83
Identities = 11/20 (55%), Positives = 12/20 (60%)
Query: 106 TPTTPPQPPDPSQPPPGPMQ 125
+P TPP PP P PP P Q
Sbjct: 1954 SPETPPPPPPPPPLPPAPPQ 1973
Score = 28.1 bits (61), Expect = 1.8
Identities = 10/19 (52%), Positives = 10/19 (52%)
Query: 105 PTPTTPPQPPDPSQPPPGP 123
P PP PP P PPP P
Sbjct: 1989 PLQAPPPTPPPPPPPPPPP 2007
Score = 27.3 bits (59), Expect = 3.2
Identities = 10/17 (58%), Positives = 10/17 (58%)
Query: 105 PTPTTPPQPPDPSQPPP 121
P TPP PP P PPP
Sbjct: 3112 PLLQTPPPPPPPPPPPP 3128
Score = 26.6 bits (57), Expect = 5.4
Identities = 9/18 (50%), Positives = 12/18 (66%)
Query: 106 TPTTPPQPPDPSQPPPGP 123
+P++P PP P PPP P
Sbjct: 1951 SPSSPETPPPPPPPPPLP 1968
Score = 26.6 bits (57), Expect = 5.4
Identities = 12/28 (42%), Positives = 17/28 (60%), Gaps = 5/28 (17%)
Query: 101 ATLGP-----TPTTPPQPPDPSQPPPGP 123
+++GP T +TP Q P P+ PPP P
Sbjct: 1975 SSMGPVKIPNTVSTPLQAPPPTPPPPPP 2002
>gi|118766337 zinc finger protein of the cerebellum 5 [Homo sapiens]
Length = 663
Score = 33.1 bits (74), Expect = 0.058
Identities = 17/40 (42%), Positives = 18/40 (45%), Gaps = 3/40 (7%)
Query: 84 GCGHTHCVRGHRKGRRRATLGPTPTTPPQPPDPSQPPPGP 123
G G C G + A P P PP PP PS PPP P
Sbjct: 132 GAGSYPCGGGSSGAQPSA---PPPPAPPLPPTPSPPPPPP 168
Score = 28.5 bits (62), Expect = 1.4
Identities = 12/19 (63%), Positives = 13/19 (68%), Gaps = 2/19 (10%)
Query: 103 LGPTPTTPPQPPDPSQPPP 121
L PTP+ PP PP P PPP
Sbjct: 157 LPPTPSPPPPPPPP--PPP 173
Score = 28.1 bits (61), Expect = 1.8
Identities = 10/17 (58%), Positives = 10/17 (58%)
Query: 105 PTPTTPPQPPDPSQPPP 121
P P TP PP P PPP
Sbjct: 156 PLPPTPSPPPPPPPPPP 172
Score = 26.9 bits (58), Expect = 4.1
Identities = 10/19 (52%), Positives = 10/19 (52%)
Query: 103 LGPTPTTPPQPPDPSQPPP 121
L P PP PP P PPP
Sbjct: 406 LAGLPPPPPPPPPPPPPPP 424
Score = 26.6 bits (57), Expect = 5.4
Identities = 10/19 (52%), Positives = 10/19 (52%)
Query: 104 GPTPTTPPQPPDPSQPPPG 122
G P PP PP P PP G
Sbjct: 408 GLPPPPPPPPPPPPPPPAG 426
Score = 26.6 bits (57), Expect = 5.4
Identities = 9/14 (64%), Positives = 9/14 (64%)
Query: 110 PPQPPDPSQPPPGP 123
PP PP P PPP P
Sbjct: 410 PPPPPPPPPPPPPP 423
Score = 26.6 bits (57), Expect = 5.4
Identities = 9/14 (64%), Positives = 9/14 (64%)
Query: 110 PPQPPDPSQPPPGP 123
PP PP P PPP P
Sbjct: 411 PPPPPPPPPPPPPP 424
Score = 26.2 bits (56), Expect = 7.0
Identities = 13/31 (41%), Positives = 13/31 (41%), Gaps = 5/31 (16%)
Query: 101 ATLGPTP-----TTPPQPPDPSQPPPGPMQH 126
A GP P PP PP P P P QH
Sbjct: 343 AAAGPGPHLQHHAPPPAPPPPPAPAQHPHQH 373
>gi|62945417 dystrophia myotonica-containing WD repeat motif protein
[Homo sapiens]
Length = 674
Score = 33.1 bits (74), Expect = 0.058
Identities = 12/20 (60%), Positives = 12/20 (60%)
Query: 104 GPTPTTPPQPPDPSQPPPGP 123
GP P PP P QPPPGP
Sbjct: 46 GPASAQTPVPPQPPQPPPGP 65
>gi|55741677 SET domain containing 1A [Homo sapiens]
Length = 1707
Score = 32.7 bits (73), Expect = 0.075
Identities = 12/19 (63%), Positives = 12/19 (63%)
Query: 105 PTPTTPPQPPDPSQPPPGP 123
P PT P QPP P PPP P
Sbjct: 596 PAPTPPQQPPPPPPPPPPP 614
Score = 31.6 bits (70), Expect = 0.17
Identities = 17/49 (34%), Positives = 20/49 (40%)
Query: 72 ESSTESDEEEEEGCGHTHCVRGHRKGRRRATLGPTPTTPPQPPDPSQPP 120
E E +EEEEE + G RRR+ P PP P PP
Sbjct: 1364 EGEEEGEEEEEESSDSSSSSDGEGALRRRSLRSHARRRRPPPPPPPPPP 1412
Score = 30.0 bits (66), Expect = 0.49
Identities = 11/19 (57%), Positives = 11/19 (57%)
Query: 105 PTPTTPPQPPDPSQPPPGP 123
PTP P PP P PPP P
Sbjct: 598 PTPPQQPPPPPPPPPPPPP 616
Score = 29.6 bits (65), Expect = 0.64
Identities = 19/58 (32%), Positives = 23/58 (39%), Gaps = 14/58 (24%)
Query: 71 GESSTESDEEEE---------EGCGHTHCVRGHRKGRRRATLGPTPTTPPQPPDPSQP 119
GE E +EEE EG +R H + RR P P PP PP +P
Sbjct: 1365 GEEEGEEEEEESSDSSSSSDGEGALRRRSLRSHARRRR-----PPPPPPPPPPRAYEP 1417
Score = 29.3 bits (64), Expect = 0.83
Identities = 11/19 (57%), Positives = 11/19 (57%)
Query: 105 PTPTTPPQPPDPSQPPPGP 123
P TPPQ P P PPP P
Sbjct: 595 PPAPTPPQQPPPPPPPPPP 613
Score = 27.3 bits (59), Expect = 3.2
Identities = 11/21 (52%), Positives = 11/21 (52%)
Query: 103 LGPTPTTPPQPPDPSQPPPGP 123
L P P PP P P PPP P
Sbjct: 634 LPPRPDGPPPPEYPPPPPPPP 654
Score = 26.6 bits (57), Expect = 5.4
Identities = 11/24 (45%), Positives = 14/24 (58%), Gaps = 4/24 (16%)
Query: 104 GPTPTTPP----QPPDPSQPPPGP 123
GPT +PP +PP+P PP P
Sbjct: 1120 GPTEESPPSAPLRPPEPPAGPPAP 1143
Score = 25.8 bits (55), Expect = 9.2
Identities = 21/79 (26%), Positives = 30/79 (37%), Gaps = 15/79 (18%)
Query: 47 TVDNEHMGRRSSKCCCIYEKPRAFGESSTESDEEEEEGCGHTHCVRGHRKGRRRATLGPT 106
T D+E SS + SS+ES E+EE + R A L
Sbjct: 1030 TSDSESSSSSSSSSSSSSSSSSSSSSSSSESSSEDEE------------EEERPAAL--- 1074
Query: 107 PTTPPQPPDPSQPPPGPMQ 125
P+ P P + P P P++
Sbjct: 1075 PSASPPPREVPVPTPAPVE 1093
>gi|155030232 proline, glutamic acid and leucine rich protein 1
[Homo sapiens]
Length = 1130
Score = 32.7 bits (73), Expect = 0.075
Identities = 19/50 (38%), Positives = 20/50 (40%), Gaps = 1/50 (2%)
Query: 72 ESSTESDEEEEEGCGHTHCVR-GHRKGRRRATLGPTPTTPPQPPDPSQPP 120
E E DEEEEE + G G P PT PP P P PP
Sbjct: 944 EEEEEEDEEEEEELEEVEDLEFGTAGGEVEEGAPPPPTLPPALPPPESPP 993
Score = 26.6 bits (57), Expect = 5.4
Identities = 11/24 (45%), Positives = 13/24 (54%), Gaps = 4/24 (16%)
Query: 105 PTPTTPPQPPDPSQP----PPGPM 124
P P PP+ P P + PPGPM
Sbjct: 648 PAPVPPPEAPSPFRAPPFHPPGPM 671
Score = 26.2 bits (56), Expect = 7.0
Identities = 12/24 (50%), Positives = 13/24 (54%), Gaps = 4/24 (16%)
Query: 101 ATLGPTPTTPPQPPDPSQPPPGPM 124
A GP P PP PP P PGP+
Sbjct: 834 AAPGPLPPPPPPPP----PVPGPV 853
>gi|169636435 caudal type homeobox 2 [Homo sapiens]
Length = 313
Score = 32.3 bits (72), Expect = 0.098
Identities = 11/19 (57%), Positives = 13/19 (68%)
Query: 107 PTTPPQPPDPSQPPPGPMQ 125
P PP PP P QP PGP++
Sbjct: 258 PQPPPPPPQPPQPQPGPLR 276
>gi|169167066 PREDICTED: hypothetical protein [Homo sapiens]
Length = 262
Score = 32.3 bits (72), Expect = 0.098
Identities = 12/19 (63%), Positives = 12/19 (63%)
Query: 105 PTPTTPPQPPDPSQPPPGP 123
P P TP PP P PPPGP
Sbjct: 37 PPPPTPRPPPPPPLPPPGP 55
Score = 29.3 bits (64), Expect = 0.83
Identities = 10/18 (55%), Positives = 11/18 (61%)
Query: 107 PTTPPQPPDPSQPPPGPM 124
P PP PP P PPP P+
Sbjct: 33 PPPPPPPPTPRPPPPPPL 50
Score = 27.3 bits (59), Expect = 3.2
Identities = 11/22 (50%), Positives = 11/22 (50%)
Query: 102 TLGPTPTTPPQPPDPSQPPPGP 123
T P P PP P P PPP P
Sbjct: 30 TYPPPPPPPPPTPRPPPPPPLP 51
Score = 25.8 bits (55), Expect = 9.2
Identities = 10/20 (50%), Positives = 11/20 (55%)
Query: 104 GPTPTTPPQPPDPSQPPPGP 123
G T PP PP P+ PP P
Sbjct: 28 GTTYPPPPPPPPPTPRPPPP 47
>gi|113416187 PREDICTED: hypothetical protein [Homo sapiens]
Length = 262
Score = 32.3 bits (72), Expect = 0.098
Identities = 12/19 (63%), Positives = 12/19 (63%)
Query: 105 PTPTTPPQPPDPSQPPPGP 123
P P TP PP P PPPGP
Sbjct: 37 PPPPTPRPPPPPPLPPPGP 55
Score = 29.3 bits (64), Expect = 0.83
Identities = 10/18 (55%), Positives = 11/18 (61%)
Query: 107 PTTPPQPPDPSQPPPGPM 124
P PP PP P PPP P+
Sbjct: 33 PPPPPPPPTPRPPPPPPL 50
Score = 27.3 bits (59), Expect = 3.2
Identities = 11/22 (50%), Positives = 11/22 (50%)
Query: 102 TLGPTPTTPPQPPDPSQPPPGP 123
T P P PP P P PPP P
Sbjct: 30 TYPPPPPPPPPTPRPPPPPPLP 51
Score = 25.8 bits (55), Expect = 9.2
Identities = 10/20 (50%), Positives = 11/20 (55%)
Query: 104 GPTPTTPPQPPDPSQPPPGP 123
G T PP PP P+ PP P
Sbjct: 28 GTTYPPPPPPPPPTPRPPPP 47
>gi|113415691 PREDICTED: hypothetical protein [Homo sapiens]
Length = 262
Score = 32.3 bits (72), Expect = 0.098
Identities = 12/19 (63%), Positives = 12/19 (63%)
Query: 105 PTPTTPPQPPDPSQPPPGP 123
P P TP PP P PPPGP
Sbjct: 37 PPPPTPRPPPPPPLPPPGP 55
Score = 29.3 bits (64), Expect = 0.83
Identities = 10/18 (55%), Positives = 11/18 (61%)
Query: 107 PTTPPQPPDPSQPPPGPM 124
P PP PP P PPP P+
Sbjct: 33 PPPPPPPPTPRPPPPPPL 50
Score = 27.3 bits (59), Expect = 3.2
Identities = 11/22 (50%), Positives = 11/22 (50%)
Query: 102 TLGPTPTTPPQPPDPSQPPPGP 123
T P P PP P P PPP P
Sbjct: 30 TYPPPPPPPPPTPRPPPPPPLP 51
Score = 25.8 bits (55), Expect = 9.2
Identities = 10/20 (50%), Positives = 11/20 (55%)
Query: 104 GPTPTTPPQPPDPSQPPPGP 123
G T PP PP P+ PP P
Sbjct: 28 GTTYPPPPPPPPPTPRPPPP 47
>gi|19718731 bromodomain-containing protein 4 isoform long [Homo
sapiens]
Length = 1362
Score = 32.3 bits (72), Expect = 0.098
Identities = 33/118 (27%), Positives = 48/118 (40%), Gaps = 8/118 (6%)
Query: 14 ETTVTVTTEPENRSLTIKLRK-RKPE-KKVEWTSDTVDNEHMGRRSSKCCCIYEKPRAFG 71
ET T R +T LRK RKP+ +KV+ + + ++ G SS+ E +
Sbjct: 657 ETLKPSTLRELERYVTSCLRKKRKPQAEKVDVIAGS--SKMKGFSSSESESSSESSSSDS 714
Query: 72 ESSTESDEEEEEGCGHTHCVRG----HRKGRRRATLGPTPTTPPQPPDPSQPPPGPMQ 125
E S + + GH + H + + P P PP PP PPP P Q
Sbjct: 715 EDSETEMAPKSKKKGHPGREQKKHHHHHHQQMQQAPAPVPQQPPPPPQQPPPPPPPQQ 772
Score = 28.9 bits (63), Expect = 1.1
Identities = 12/19 (63%), Positives = 12/19 (63%), Gaps = 1/19 (5%)
Query: 105 PTPTTPPQPPDPSQPPPGP 123
P T PP PP P QPPP P
Sbjct: 246 PLQTPPPVPPQP-QPPPAP 263
Score = 28.1 bits (61), Expect = 1.8
Identities = 12/22 (54%), Positives = 12/22 (54%), Gaps = 3/22 (13%)
Query: 105 PTPTTPPQPPDP---SQPPPGP 123
P P PP PP P QPPP P
Sbjct: 759 PPPQQPPPPPPPQQQQQPPPPP 780
Score = 27.3 bits (59), Expect = 3.2
Identities = 10/19 (52%), Positives = 11/19 (57%)
Query: 107 PTTPPQPPDPSQPPPGPMQ 125
P PPQP P P P P+Q
Sbjct: 251 PPVPPQPQPPPAPAPQPVQ 269
Score = 26.9 bits (58), Expect = 4.1
Identities = 12/24 (50%), Positives = 13/24 (54%), Gaps = 4/24 (16%)
Query: 105 PTPTTPPQPPDP----SQPPPGPM 124
P P PPQP P QPPP P+
Sbjct: 974 PPPPPPPQPQPPPQQQHQPPPRPV 997
Score = 25.8 bits (55), Expect = 9.2
Identities = 12/25 (48%), Positives = 12/25 (48%), Gaps = 4/25 (16%)
Query: 105 PTPTTPPQ----PPDPSQPPPGPMQ 125
P P PPQ PP P PP P Q
Sbjct: 764 PPPPPPPQQQQQPPPPPPPPSMPQQ 788
Score = 25.8 bits (55), Expect = 9.2
Identities = 12/24 (50%), Positives = 12/24 (50%), Gaps = 5/24 (20%)
Query: 105 PTPTTPP-----QPPDPSQPPPGP 123
PTP P QPP P PPP P
Sbjct: 941 PTPLLPSVKVQSQPPPPLPPPPHP 964
Score = 25.8 bits (55), Expect = 9.2
Identities = 9/17 (52%), Positives = 9/17 (52%)
Query: 110 PPQPPDPSQPPPGPMQH 126
PP PP P PP QH
Sbjct: 974 PPPPPPPQPQPPPQQQH 990
>gi|149158696 HLA-B associated transcript-3 isoform b [Homo sapiens]
Length = 1126
Score = 32.3 bits (72), Expect = 0.098
Identities = 13/23 (56%), Positives = 13/23 (56%)
Query: 103 LGPTPTTPPQPPDPSQPPPGPMQ 125
L T T PP PP P PPP P Q
Sbjct: 644 LQATQTAPPPPPPPPPPPPAPEQ 666
Score = 28.1 bits (61), Expect = 1.8
Identities = 12/21 (57%), Positives = 12/21 (57%), Gaps = 3/21 (14%)
Query: 105 PTPTTPPQPPDPSQ---PPPG 122
P P PP PP P Q PPPG
Sbjct: 653 PPPPPPPPPPAPEQQTMPPPG 673
Score = 27.3 bits (59), Expect = 3.2
Identities = 11/24 (45%), Positives = 13/24 (54%)
Query: 102 TLGPTPTTPPQPPDPSQPPPGPMQ 125
T+ T PP P+ PPPGP Q
Sbjct: 380 TMTGNGTRPPPTPNAEAPPPGPGQ 403
Score = 26.6 bits (57), Expect = 5.4
Identities = 11/24 (45%), Positives = 12/24 (50%)
Query: 102 TLGPTPTTPPQPPDPSQPPPGPMQ 125
T GP P P QPP QP +Q
Sbjct: 577 TAGPAPGGPAQPPPTPQPSMADLQ 600
>gi|18375632 HLA-B associated transcript-3 isoform b [Homo sapiens]
Length = 1126
Score = 32.3 bits (72), Expect = 0.098
Identities = 13/23 (56%), Positives = 13/23 (56%)
Query: 103 LGPTPTTPPQPPDPSQPPPGPMQ 125
L T T PP PP P PPP P Q
Sbjct: 644 LQATQTAPPPPPPPPPPPPAPEQ 666
Score = 28.1 bits (61), Expect = 1.8
Identities = 12/21 (57%), Positives = 12/21 (57%), Gaps = 3/21 (14%)
Query: 105 PTPTTPPQPPDPSQ---PPPG 122
P P PP PP P Q PPPG
Sbjct: 653 PPPPPPPPPPAPEQQTMPPPG 673
Score = 27.3 bits (59), Expect = 3.2
Identities = 11/24 (45%), Positives = 13/24 (54%)
Query: 102 TLGPTPTTPPQPPDPSQPPPGPMQ 125
T+ T PP P+ PPPGP Q
Sbjct: 380 TMTGNGTRPPPTPNAEAPPPGPGQ 403
Score = 26.6 bits (57), Expect = 5.4
Identities = 11/24 (45%), Positives = 12/24 (50%)
Query: 102 TLGPTPTTPPQPPDPSQPPPGPMQ 125
T GP P P QPP QP +Q
Sbjct: 577 TAGPAPGGPAQPPPTPQPSMADLQ 600
>gi|18375630 HLA-B associated transcript-3 isoform b [Homo sapiens]
Length = 1126
Score = 32.3 bits (72), Expect = 0.098
Identities = 13/23 (56%), Positives = 13/23 (56%)
Query: 103 LGPTPTTPPQPPDPSQPPPGPMQ 125
L T T PP PP P PPP P Q
Sbjct: 644 LQATQTAPPPPPPPPPPPPAPEQ 666
Score = 28.1 bits (61), Expect = 1.8
Identities = 12/21 (57%), Positives = 12/21 (57%), Gaps = 3/21 (14%)
Query: 105 PTPTTPPQPPDPSQ---PPPG 122
P P PP PP P Q PPPG
Sbjct: 653 PPPPPPPPPPAPEQQTMPPPG 673
Score = 27.3 bits (59), Expect = 3.2
Identities = 11/24 (45%), Positives = 13/24 (54%)
Query: 102 TLGPTPTTPPQPPDPSQPPPGPMQ 125
T+ T PP P+ PPPGP Q
Sbjct: 380 TMTGNGTRPPPTPNAEAPPPGPGQ 403
Score = 26.6 bits (57), Expect = 5.4
Identities = 11/24 (45%), Positives = 12/24 (50%)
Query: 102 TLGPTPTTPPQPPDPSQPPPGPMQ 125
T GP P P QPP QP +Q
Sbjct: 577 TAGPAPGGPAQPPPTPQPSMADLQ 600
>gi|149158692 HLA-B associated transcript-3 isoform a [Homo sapiens]
Length = 1132
Score = 32.3 bits (72), Expect = 0.098
Identities = 13/23 (56%), Positives = 13/23 (56%)
Query: 103 LGPTPTTPPQPPDPSQPPPGPMQ 125
L T T PP PP P PPP P Q
Sbjct: 650 LQATQTAPPPPPPPPPPPPAPEQ 672
Score = 28.1 bits (61), Expect = 1.8
Identities = 12/21 (57%), Positives = 12/21 (57%), Gaps = 3/21 (14%)
Query: 105 PTPTTPPQPPDPSQ---PPPG 122
P P PP PP P Q PPPG
Sbjct: 659 PPPPPPPPPPAPEQQTMPPPG 679
Score = 27.3 bits (59), Expect = 3.2
Identities = 11/24 (45%), Positives = 13/24 (54%)
Query: 102 TLGPTPTTPPQPPDPSQPPPGPMQ 125
T+ T PP P+ PPPGP Q
Sbjct: 386 TMTGNGTRPPPTPNAEAPPPGPGQ 409
Score = 26.6 bits (57), Expect = 5.4
Identities = 11/24 (45%), Positives = 12/24 (50%)
Query: 102 TLGPTPTTPPQPPDPSQPPPGPMQ 125
T GP P P QPP QP +Q
Sbjct: 583 TAGPAPGGPAQPPPTPQPSMADLQ 606
>gi|47132519 Ras association and pleckstrin homology domains 1
isoform 1 [Homo sapiens]
Length = 1250
Score = 32.3 bits (72), Expect = 0.098
Identities = 12/22 (54%), Positives = 13/22 (59%)
Query: 103 LGPTPTTPPQPPDPSQPPPGPM 124
L P P PP PP P PPP P+
Sbjct: 628 LPPPPPPPPPPPPPPPPPPPPL 649
Score = 31.6 bits (70), Expect = 0.17
Identities = 11/19 (57%), Positives = 12/19 (63%)
Query: 105 PTPTTPPQPPDPSQPPPGP 123
P+P PP PP P PPP P
Sbjct: 624 PSPPLPPPPPPPPPPPPPP 642
Score = 31.6 bits (70), Expect = 0.17
Identities = 12/21 (57%), Positives = 12/21 (57%)
Query: 105 PTPTTPPQPPDPSQPPPGPMQ 125
P P PP PP P PPP P Q
Sbjct: 632 PPPPPPPPPPPPPPPPPLPSQ 652
Score = 30.8 bits (68), Expect = 0.29
Identities = 11/19 (57%), Positives = 11/19 (57%)
Query: 105 PTPTTPPQPPDPSQPPPGP 123
P P PP PP P PPP P
Sbjct: 627 PLPPPPPPPPPPPPPPPPP 645
Score = 26.9 bits (58), Expect = 4.1
Identities = 10/19 (52%), Positives = 10/19 (52%)
Query: 105 PTPTTPPQPPDPSQPPPGP 123
P PP PP P PPP P
Sbjct: 626 PPLPPPPPPPPPPPPPPPP 644
Score = 26.6 bits (57), Expect = 5.4
Identities = 11/24 (45%), Positives = 14/24 (58%), Gaps = 4/24 (16%)
Query: 105 PTPTTPPQPPDPS----QPPPGPM 124
P+P PP PP+ S PPP P+
Sbjct: 912 PSPDFPPPPPESSLVFPPPPPSPV 935
Score = 25.8 bits (55), Expect = 9.2
Identities = 10/17 (58%), Positives = 10/17 (58%)
Query: 105 PTPTTPPQPPDPSQPPP 121
P P PP PP PSQ P
Sbjct: 639 PPPPPPPPPPLPSQSAP 655
Score = 25.8 bits (55), Expect = 9.2
Identities = 9/18 (50%), Positives = 9/18 (50%)
Query: 105 PTPTTPPQPPDPSQPPPG 122
P PP PP P P PG
Sbjct: 705 PNGVVPPPPPPPPPPTPG 722
Score = 25.8 bits (55), Expect = 9.2
Identities = 10/19 (52%), Positives = 11/19 (57%)
Query: 107 PTTPPQPPDPSQPPPGPMQ 125
P +PP PP P PP P Q
Sbjct: 825 PPSPPTPPVPVPPPTLPKQ 843
>gi|32455273 WNK lysine deficient protein kinase 2 [Homo sapiens]
Length = 2217
Score = 32.3 bits (72), Expect = 0.098
Identities = 17/38 (44%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
Query: 89 HCVRGHRKGRRRATLGPTPTTPPQPPDPSQP--PPGPM 124
H V+ R + L P PT PPQP P QP PP P+
Sbjct: 930 HTVQNMRATPPQPALPPQPTLPPQPVLPPQPTLPPQPV 967
Score = 32.0 bits (71), Expect = 0.13
Identities = 15/25 (60%), Positives = 15/25 (60%), Gaps = 2/25 (8%)
Query: 102 TLGPTPTTPPQPPDPSQP--PPGPM 124
TL P P PPQP P QP PP PM
Sbjct: 961 TLPPQPVLPPQPTRPPQPVLPPQPM 985
Score = 29.3 bits (64), Expect = 0.83
Identities = 14/24 (58%), Positives = 15/24 (62%), Gaps = 2/24 (8%)
Query: 103 LGPTPTTPPQPPDPSQP--PPGPM 124
L P PT PPQP P QP PP P+
Sbjct: 956 LPPQPTLPPQPVLPPQPTRPPQPV 979
Score = 26.6 bits (57), Expect = 5.4
Identities = 13/24 (54%), Positives = 13/24 (54%), Gaps = 2/24 (8%)
Query: 102 TLGPTPTTPPQPPDPSQP--PPGP 123
T P P PPQP P QP PP P
Sbjct: 973 TRPPQPVLPPQPMLPPQPVLPPQP 996
Score = 26.2 bits (56), Expect = 7.0
Identities = 10/17 (58%), Positives = 10/17 (58%)
Query: 105 PTPTTPPQPPDPSQPPP 121
P PT P QP P Q PP
Sbjct: 716 PMPTGPGQPAPPGQQPP 732
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.309 0.127 0.391
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,527,102
Number of Sequences: 37866
Number of extensions: 457104
Number of successful extensions: 9392
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 455
Number of HSP's successfully gapped in prelim test: 268
Number of HSP's that attempted gapping in prelim test: 5109
Number of HSP's gapped (non-prelim): 3539
length of query: 126
length of database: 18,247,518
effective HSP length: 90
effective length of query: 36
effective length of database: 14,839,578
effective search space: 534224808
effective search space used: 534224808
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.