Guide to the Human Genome
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Name: PPP1R11 Sequence: fasta or formatted (126aa) NCBI GI: 11386175
Description:

protein phosphatase 1, regulatory (inhibitor) subunit 11

Referenced in:

Serine / Threonine Protein Phosphatases

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.0          5           1
 C cysteine            4.0          5           3
 D aspartate           3.2          4           1
 E glutamate          12.7         16           5
 F phenylalanine       0.8          1           1
 G glycine             7.9         10           1
 H histidine           4.0          5           1
 I isoleucine          1.6          2           1
 K lysine              6.3          8           2
 L leucine             3.2          4           1
 M methionine          2.4          3           1
 N asparagine          1.6          2           1
 P proline            11.1         14           3
 Q glutamine           2.4          3           1
 R arginine            8.7         11           3
 S serine              7.1          9           2
 T threonine          12.7         16           2
 V valine              4.8          6           1
 W tryptophan          0.8          1           1
 Y tyrosine            0.8          1           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   protein phosphatase 1, regulatory (inhibitor) subuni... 
LOC100291632          0.053   PREDICTED: hypothetical protein XP_002344527 
LOC100288471          0.053   PREDICTED: hypothetical protein 
LOC100288471          0.053   PREDICTED: hypothetical protein XP_002343034 
WHAMM                 0.049   WAS protein homolog associated with actin, golgi me...
CHD3                  0.045   chromodomain helicase DNA binding protein 3 isoform...
CNGB1                 0.041   cyclic nucleotide gated channel beta 1 isoform a [H...
DENND2A               0.041   DENN/MADD domain containing 2A 
JMY                   0.033   junction-mediating and regulatory protein 
MAP3K11               0.033   mitogen-activated protein kinase kinase kinase 11 [Ho...
C10orf134             0.033   PREDICTED: chromosome 10 open reading frame 134 [Ho...
C10orf134             0.033   PREDICTED: chromosome 10 open reading frame 134 [Ho...
C10orf134             0.033   PREDICTED: chromosome 10 open reading frame 134 [Ho...
RBM33                 0.033   RNA binding motif protein 33 
ZFHX4                 0.033   zinc finger homeodomain 4 
ZIC5                  0.033   zinc finger protein of the cerebellum 5 
DMWD                  0.033   dystrophia myotonica-containing WD repeat motif prot...
SETD1A                0.033   SET domain containing 1A 
PELP1                 0.033   proline, glutamic acid and leucine rich protein 1 [...
CDX2                  0.028   caudal type homeobox 2 
FLJ20021              0.028   PREDICTED: hypothetical protein 
FLJ20021              0.028   PREDICTED: hypothetical protein 
FLJ20021              0.028   PREDICTED: hypothetical protein 
BRD4                  0.028   bromodomain-containing protein 4 isoform long 
BAT3                  0.028   HLA-B associated transcript-3 isoform b 
BAT3                  0.028   HLA-B associated transcript-3 isoform b 
BAT3                  0.028   HLA-B associated transcript-3 isoform b 
BAT3                  0.028   HLA-B associated transcript-3 isoform a 
RAPH1                 0.028   Ras association and pleckstrin homology domains 1 is...
WNK2                  0.028   WNK lysine deficient protein kinase 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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