Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 113430608
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|113430608 PREDICTED: hypothetical protein [Homo sapiens]
(161 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|113430608 PREDICTED: hypothetical protein [Homo sapiens] 329 7e-91
gi|113430126 PREDICTED: hypothetical protein [Homo sapiens] 329 7e-91
gi|169217249 PREDICTED: hypothetical protein [Homo sapiens] 298 1e-81
gi|169204585 PREDICTED: similar to mCG115122 [Homo sapiens] 87 8e-18
gi|169205186 PREDICTED: similar to mCG115122 [Homo sapiens] 87 8e-18
gi|169204245 PREDICTED: similar to mCG115122 [Homo sapiens] 87 8e-18
gi|145386517 phostensin [Homo sapiens] 35 0.021
gi|199559805 phostensin [Homo sapiens] 35 0.021
gi|195972805 myocyte enhancer factor 2A isoform 4 [Homo sapiens] 34 0.048
gi|195972801 myocyte enhancer factor 2A isoform 2 [Homo sapiens] 34 0.048
gi|195972799 myocyte enhancer factor 2A isoform 1 [Homo sapiens] 34 0.048
gi|5454106 TBP-related factor 10 [Homo sapiens] 33 0.11
gi|24308073 protein tyrosine phosphatase, non-receptor type 23 [... 33 0.14
gi|115430223 galectin 3 [Homo sapiens] 32 0.31
gi|5453936 POU class 3 homeobox 3 [Homo sapiens] 32 0.31
gi|55769533 PRKC, apoptosis, WT1, regulator [Homo sapiens] 31 0.40
gi|169162518 PREDICTED: hypothetical protein [Homo sapiens] 30 0.90
gi|169162027 PREDICTED: hypothetical protein [Homo sapiens] 30 0.90
gi|169161198 PREDICTED: hypothetical protein [Homo sapiens] 30 0.90
gi|25470890 DAZ associated protein 1 isoform a [Homo sapiens] 30 0.90
gi|25470886 DAZ associated protein 1 isoform b [Homo sapiens] 30 0.90
gi|239743055 PREDICTED: hypothetical protein XP_002342730 [Homo ... 30 1.2
gi|5902084 silver homolog [Homo sapiens] 30 1.2
gi|14249622 ajuba isoform 1 [Homo sapiens] 30 1.2
gi|169210256 PREDICTED: hypothetical protein [Homo sapiens] 29 1.5
gi|239755715 PREDICTED: similar to hCG2002101 [Homo sapiens] 29 1.5
gi|239752750 PREDICTED: similar to protein phosphatase 2, cataly... 29 1.5
gi|156416026 zinc finger protein 219 [Homo sapiens] 29 1.5
gi|156415998 zinc finger protein 219 [Homo sapiens] 29 1.5
gi|156415996 zinc finger protein 219 [Homo sapiens] 29 1.5
>gi|113430608 PREDICTED: hypothetical protein [Homo sapiens]
Length = 161
Score = 329 bits (843), Expect = 7e-91
Identities = 161/161 (100%), Positives = 161/161 (100%)
Query: 1 MGTYARHIIMFKSKGHADPVGRGGTWQGASDRWGQSPAGKGGLPPCSAARISSSPGGLPP 60
MGTYARHIIMFKSKGHADPVGRGGTWQGASDRWGQSPAGKGGLPPCSAARISSSPGGLPP
Sbjct: 1 MGTYARHIIMFKSKGHADPVGRGGTWQGASDRWGQSPAGKGGLPPCSAARISSSPGGLPP 60
Query: 61 VLSRVHPSVPRSVSQRSLMEALGSGHYVGGSIRSMAAAALSGLAVRLSRPQGTRGSYGAF 120
VLSRVHPSVPRSVSQRSLMEALGSGHYVGGSIRSMAAAALSGLAVRLSRPQGTRGSYGAF
Sbjct: 61 VLSRVHPSVPRSVSQRSLMEALGSGHYVGGSIRSMAAAALSGLAVRLSRPQGTRGSYGAF 120
Query: 121 CKTLTRTLLTFFDLAWRLRKNFFYFYILASVILNVHLQVYI 161
CKTLTRTLLTFFDLAWRLRKNFFYFYILASVILNVHLQVYI
Sbjct: 121 CKTLTRTLLTFFDLAWRLRKNFFYFYILASVILNVHLQVYI 161
>gi|113430126 PREDICTED: hypothetical protein [Homo sapiens]
Length = 161
Score = 329 bits (843), Expect = 7e-91
Identities = 161/161 (100%), Positives = 161/161 (100%)
Query: 1 MGTYARHIIMFKSKGHADPVGRGGTWQGASDRWGQSPAGKGGLPPCSAARISSSPGGLPP 60
MGTYARHIIMFKSKGHADPVGRGGTWQGASDRWGQSPAGKGGLPPCSAARISSSPGGLPP
Sbjct: 1 MGTYARHIIMFKSKGHADPVGRGGTWQGASDRWGQSPAGKGGLPPCSAARISSSPGGLPP 60
Query: 61 VLSRVHPSVPRSVSQRSLMEALGSGHYVGGSIRSMAAAALSGLAVRLSRPQGTRGSYGAF 120
VLSRVHPSVPRSVSQRSLMEALGSGHYVGGSIRSMAAAALSGLAVRLSRPQGTRGSYGAF
Sbjct: 61 VLSRVHPSVPRSVSQRSLMEALGSGHYVGGSIRSMAAAALSGLAVRLSRPQGTRGSYGAF 120
Query: 121 CKTLTRTLLTFFDLAWRLRKNFFYFYILASVILNVHLQVYI 161
CKTLTRTLLTFFDLAWRLRKNFFYFYILASVILNVHLQVYI
Sbjct: 121 CKTLTRTLLTFFDLAWRLRKNFFYFYILASVILNVHLQVYI 161
>gi|169217249 PREDICTED: hypothetical protein [Homo sapiens]
Length = 202
Score = 298 bits (764), Expect = 1e-81
Identities = 146/146 (100%), Positives = 146/146 (100%)
Query: 16 HADPVGRGGTWQGASDRWGQSPAGKGGLPPCSAARISSSPGGLPPVLSRVHPSVPRSVSQ 75
HADPVGRGGTWQGASDRWGQSPAGKGGLPPCSAARISSSPGGLPPVLSRVHPSVPRSVSQ
Sbjct: 57 HADPVGRGGTWQGASDRWGQSPAGKGGLPPCSAARISSSPGGLPPVLSRVHPSVPRSVSQ 116
Query: 76 RSLMEALGSGHYVGGSIRSMAAAALSGLAVRLSRPQGTRGSYGAFCKTLTRTLLTFFDLA 135
RSLMEALGSGHYVGGSIRSMAAAALSGLAVRLSRPQGTRGSYGAFCKTLTRTLLTFFDLA
Sbjct: 117 RSLMEALGSGHYVGGSIRSMAAAALSGLAVRLSRPQGTRGSYGAFCKTLTRTLLTFFDLA 176
Query: 136 WRLRKNFFYFYILASVILNVHLQVYI 161
WRLRKNFFYFYILASVILNVHLQVYI
Sbjct: 177 WRLRKNFFYFYILASVILNVHLQVYI 202
>gi|169204585 PREDICTED: similar to mCG115122 [Homo sapiens]
Length = 68
Score = 86.7 bits (213), Expect = 8e-18
Identities = 43/65 (66%), Positives = 49/65 (75%)
Query: 97 AAALSGLAVRLSRPQGTRGSYGAFCKTLTRTLLTFFDLAWRLRKNFFYFYILASVILNVH 156
AAA S LAVR S P T SYG FCK L+RTLL FF+LAW+LR NF YFY+ SVILN+
Sbjct: 4 AAAPSSLAVRASSPAATPTSYGVFCKGLSRTLLAFFELAWQLRMNFPYFYVAGSVILNIR 63
Query: 157 LQVYI 161
LQV+I
Sbjct: 64 LQVHI 68
>gi|169205186 PREDICTED: similar to mCG115122 [Homo sapiens]
Length = 68
Score = 86.7 bits (213), Expect = 8e-18
Identities = 43/65 (66%), Positives = 49/65 (75%)
Query: 97 AAALSGLAVRLSRPQGTRGSYGAFCKTLTRTLLTFFDLAWRLRKNFFYFYILASVILNVH 156
AAA S LAVR S P T SYG FCK L+RTLL FF+LAW+LR NF YFY+ SVILN+
Sbjct: 4 AAAPSSLAVRASSPAATPTSYGVFCKGLSRTLLAFFELAWQLRMNFPYFYVAGSVILNIR 63
Query: 157 LQVYI 161
LQV+I
Sbjct: 64 LQVHI 68
>gi|169204245 PREDICTED: similar to mCG115122 [Homo sapiens]
Length = 68
Score = 86.7 bits (213), Expect = 8e-18
Identities = 43/65 (66%), Positives = 49/65 (75%)
Query: 97 AAALSGLAVRLSRPQGTRGSYGAFCKTLTRTLLTFFDLAWRLRKNFFYFYILASVILNVH 156
AAA S LAVR S P T SYG FCK L+RTLL FF+LAW+LR NF YFY+ SVILN+
Sbjct: 4 AAAPSSLAVRASSPAATPTSYGVFCKGLSRTLLAFFELAWQLRMNFPYFYVAGSVILNIR 63
Query: 157 LQVYI 161
LQV+I
Sbjct: 64 LQVHI 68
>gi|145386517 phostensin [Homo sapiens]
Length = 613
Score = 35.4 bits (80), Expect = 0.021
Identities = 22/63 (34%), Positives = 28/63 (44%)
Query: 24 GTWQGASDRWGQSPAGKGGLPPCSAARISSSPGGLPPVLSRVHPSVPRSVSQRSLMEALG 83
G + +R Q PA K GL A++ SPG PVL V P L+EA+G
Sbjct: 24 GREKAERERLSQMPAWKRGLLERRRAKLGLSPGEPSPVLGTVEAGPPDPDESAVLLEAIG 83
Query: 84 SGH 86
H
Sbjct: 84 PVH 86
>gi|199559805 phostensin [Homo sapiens]
Length = 613
Score = 35.4 bits (80), Expect = 0.021
Identities = 22/63 (34%), Positives = 28/63 (44%)
Query: 24 GTWQGASDRWGQSPAGKGGLPPCSAARISSSPGGLPPVLSRVHPSVPRSVSQRSLMEALG 83
G + +R Q PA K GL A++ SPG PVL V P L+EA+G
Sbjct: 24 GREKAERERLSQMPAWKRGLLERRRAKLGLSPGEPSPVLGTVEAGPPDPDESAVLLEAIG 83
Query: 84 SGH 86
H
Sbjct: 84 PVH 86
>gi|195972805 myocyte enhancer factor 2A isoform 4 [Homo sapiens]
Length = 429
Score = 34.3 bits (77), Expect = 0.048
Identities = 24/69 (34%), Positives = 35/69 (50%), Gaps = 6/69 (8%)
Query: 37 PAGKGGLPPCSAARISSSPGGLP---PVLSRVHPSVPRSVSQRSLMEALGSGHYVGGSIR 93
P+ KG +PP + RISSS P PV+S PS+P Q + A+ + + S+
Sbjct: 209 PSSKGMMPPLNTQRISSSQATQPLATPVVSVTTPSLP---PQGLVYSAMPTAYNTDYSLT 265
Query: 94 SMAAAALSG 102
S +AL G
Sbjct: 266 SADLSALQG 274
>gi|195972801 myocyte enhancer factor 2A isoform 2 [Homo sapiens]
Length = 497
Score = 34.3 bits (77), Expect = 0.048
Identities = 24/69 (34%), Positives = 35/69 (50%), Gaps = 6/69 (8%)
Query: 37 PAGKGGLPPCSAARISSSPGGLP---PVLSRVHPSVPRSVSQRSLMEALGSGHYVGGSIR 93
P+ KG +PP + RISSS P PV+S PS+P Q + A+ + + S+
Sbjct: 277 PSSKGMMPPLNTQRISSSQATQPLATPVVSVTTPSLP---PQGLVYSAMPTAYNTDYSLT 333
Query: 94 SMAAAALSG 102
S +AL G
Sbjct: 334 SADLSALQG 342
>gi|195972799 myocyte enhancer factor 2A isoform 1 [Homo sapiens]
Length = 499
Score = 34.3 bits (77), Expect = 0.048
Identities = 24/69 (34%), Positives = 35/69 (50%), Gaps = 6/69 (8%)
Query: 37 PAGKGGLPPCSAARISSSPGGLP---PVLSRVHPSVPRSVSQRSLMEALGSGHYVGGSIR 93
P+ KG +PP + RISSS P PV+S PS+P Q + A+ + + S+
Sbjct: 279 PSSKGMMPPLNTQRISSSQATQPLATPVVSVTTPSLP---PQGLVYSAMPTAYNTDYSLT 335
Query: 94 SMAAAALSG 102
S +AL G
Sbjct: 336 SADLSALQG 344
>gi|5454106 TBP-related factor 10 [Homo sapiens]
Length = 218
Score = 33.1 bits (74), Expect = 0.11
Identities = 24/81 (29%), Positives = 35/81 (43%), Gaps = 5/81 (6%)
Query: 36 SPAGKGGLPPCSAARISSSPGGLPPVLSRVHPSVPRSVSQRSLMEALGSGHYVGGSIRSM 95
S +G G P + A +S+PG PPV + ++P S + + G+ GG
Sbjct: 2 SCSGSGADPEAAPASAASAPGPAPPVSAPA--ALPSSTAAENKASPAGT---AGGPGAGA 56
Query: 96 AAAALSGLAVRLSRPQGTRGS 116
AA LA R P RG+
Sbjct: 57 AAGGTGPLAARAGEPAERRGA 77
>gi|24308073 protein tyrosine phosphatase, non-receptor type 23 [Homo
sapiens]
Length = 1636
Score = 32.7 bits (73), Expect = 0.14
Identities = 18/49 (36%), Positives = 22/49 (44%)
Query: 37 PAGKGGLPPCSAARISSSPGGLPPVLSRVHPSVPRSVSQRSLMEALGSG 85
PA GLPP S + P PP LS P P+ + + EA SG
Sbjct: 1523 PAEPPGLPPASLPESTPIPSSSPPPLSSPLPEAPQPKEEPPVPEAPSSG 1571
>gi|115430223 galectin 3 [Homo sapiens]
Length = 250
Score = 31.6 bits (70), Expect = 0.31
Identities = 19/46 (41%), Positives = 23/46 (50%), Gaps = 9/46 (19%)
Query: 15 GHADPVGRGGTWQGASDRWGQSPAGKGGLPPCSAARISSSPGGLPP 60
G+ +P G W GA WG PAG GG P A+ + PG PP
Sbjct: 15 GNPNPQG----WPGA---WGNQPAGAGGYP--GASYPGAYPGQAPP 51
>gi|5453936 POU class 3 homeobox 3 [Homo sapiens]
Length = 500
Score = 31.6 bits (70), Expect = 0.31
Identities = 31/104 (29%), Positives = 42/104 (40%), Gaps = 14/104 (13%)
Query: 16 HADPVGRGGTWQGASDRWGQSPAGKGG-LPPCSAARISSSPGGLPPVLSRVHPSVPRSVS 74
H+D G GG G G G GG + P SAA S + G P + V +S
Sbjct: 23 HSDAAGAGGGGGGGGGGGGGGAGGGGGGMQPGSAAVTSGAYRGDPSSVKMV-----QSDF 77
Query: 75 QRSLMEALGSGHYVGGSIR--------SMAAAALSGLAVRLSRP 110
+ M A GH + + + + AAAA + AV S P
Sbjct: 78 MQGAMAASNGGHMLSHAHQWVTALPHAAAAAAAAAAAAVEASSP 121
>gi|55769533 PRKC, apoptosis, WT1, regulator [Homo sapiens]
Length = 340
Score = 31.2 bits (69), Expect = 0.40
Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 7/61 (11%)
Query: 12 KSKGHADPVGRGGTWQGASDRWGQSPAGKGGLPPCSAAR--ISSSPGGLPPVLSRVHPSV 69
K + +P G G+SD G+ PAG G P +AA ++ PGG P P+V
Sbjct: 29 KMRAKQNPPGPAPPGGGSSDAAGKPPAGALGTPAAAAANELNNNLPGGAPAA-----PAV 83
Query: 70 P 70
P
Sbjct: 84 P 84
>gi|169162518 PREDICTED: hypothetical protein [Homo sapiens]
Length = 216
Score = 30.0 bits (66), Expect = 0.90
Identities = 28/106 (26%), Positives = 43/106 (40%), Gaps = 7/106 (6%)
Query: 15 GHADPVGRGGTWQGASDRWGQSPAGKGGLPP----CSAARISSSPGGLPPVLS-RVHPSV 69
G P+ G WG S G G + A++ GG P + R P +
Sbjct: 83 GRPPPLREASRDFGGRHHWGGSKRGSGRRLERGVRVNRAQVRGEGGGRGPCQALRGRPQI 142
Query: 70 PRSVSQRSLMEALGSGHYVGGSIRSMAAAALSGLAVRLSRPQGTRG 115
P + Q ++ +A G G + GG ++ AAA +G RP+ G
Sbjct: 143 PHAGVQ-NVCDAEG-GLFDGGGVQGEGAAAWAGRGAVSGRPEAEVG 186
>gi|169162027 PREDICTED: hypothetical protein [Homo sapiens]
Length = 216
Score = 30.0 bits (66), Expect = 0.90
Identities = 28/106 (26%), Positives = 43/106 (40%), Gaps = 7/106 (6%)
Query: 15 GHADPVGRGGTWQGASDRWGQSPAGKGGLPP----CSAARISSSPGGLPPVLS-RVHPSV 69
G P+ G WG S G G + A++ GG P + R P +
Sbjct: 83 GRPPPLREASRDFGGRHHWGGSKRGSGRRLERGVRVNRAQVRGEGGGRGPCQALRGRPQI 142
Query: 70 PRSVSQRSLMEALGSGHYVGGSIRSMAAAALSGLAVRLSRPQGTRG 115
P + Q ++ +A G G + GG ++ AAA +G RP+ G
Sbjct: 143 PHAGVQ-NVCDAEG-GLFDGGGVQGEGAAAWAGRGAVSGRPEAEVG 186
>gi|169161198 PREDICTED: hypothetical protein [Homo sapiens]
Length = 216
Score = 30.0 bits (66), Expect = 0.90
Identities = 28/106 (26%), Positives = 43/106 (40%), Gaps = 7/106 (6%)
Query: 15 GHADPVGRGGTWQGASDRWGQSPAGKGGLPP----CSAARISSSPGGLPPVLS-RVHPSV 69
G P+ G WG S G G + A++ GG P + R P +
Sbjct: 83 GRPPPLREASRDFGGRHHWGGSKRGSGRRLERGVRVNRAQVRGEGGGRGPCQALRGRPQI 142
Query: 70 PRSVSQRSLMEALGSGHYVGGSIRSMAAAALSGLAVRLSRPQGTRG 115
P + Q ++ +A G G + GG ++ AAA +G RP+ G
Sbjct: 143 PHAGVQ-NVCDAEG-GLFDGGGVQGEGAAAWAGRGAVSGRPEAEVG 186
>gi|25470890 DAZ associated protein 1 isoform a [Homo sapiens]
Length = 378
Score = 30.0 bits (66), Expect = 0.90
Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 6/46 (13%)
Query: 21 GRGGTWQGASDR---WGQSPAGKGGLPP---CSAARISSSPGGLPP 60
G G W A +G PAG+G PP ++ +S+ PGG PP
Sbjct: 231 GPQGMWVPAGQAIGGYGPPPAGRGAPPPPPPFTSYIVSTPPGGFPP 276
>gi|25470886 DAZ associated protein 1 isoform b [Homo sapiens]
Length = 407
Score = 30.0 bits (66), Expect = 0.90
Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 6/46 (13%)
Query: 21 GRGGTWQGASDR---WGQSPAGKGGLPP---CSAARISSSPGGLPP 60
G G W A +G PAG+G PP ++ +S+ PGG PP
Sbjct: 231 GPQGMWVPAGQAIGGYGPPPAGRGAPPPPPPFTSYIVSTPPGGFPP 276
>gi|239743055 PREDICTED: hypothetical protein XP_002342730 [Homo
sapiens]
Length = 235
Score = 29.6 bits (65), Expect = 1.2
Identities = 24/85 (28%), Positives = 35/85 (41%), Gaps = 11/85 (12%)
Query: 43 LPPCSAARISSSPGGLPPVL-SRVHPSVPRSVSQRSLMEALGSGHYVGGSIRSMAAAALS 101
L P SS P L P L S+ HP +++ L+ H+V S +S A A
Sbjct: 43 LSPRQEGTCSSPPAPLRPELPSQSHPEYLKALGFPRLLPQRSHEHHVSSSSKSSACGAGP 102
Query: 102 GLAVRLSRPQGTRGSYGAFCKTLTR 126
G+ + GA C+T T+
Sbjct: 103 GVG----------AAKGALCRTRTQ 117
>gi|5902084 silver homolog [Homo sapiens]
Length = 661
Score = 29.6 bits (65), Expect = 1.2
Identities = 22/62 (35%), Positives = 29/62 (46%), Gaps = 3/62 (4%)
Query: 28 GASDRWGQSPAGKGGLPPCSAARISSSPGGLPPVLSRVHPSVPRSVSQRSLMEAL--GSG 85
G D + + + +GGLP + ISS PG PP P +P Q L + L GSG
Sbjct: 505 GEGDAFELTVSCQGGLPKEACMEISS-PGCQPPAQRLCQPVLPSPACQLVLHQILKGGSG 563
Query: 86 HY 87
Y
Sbjct: 564 TY 565
>gi|14249622 ajuba isoform 1 [Homo sapiens]
Length = 538
Score = 29.6 bits (65), Expect = 1.2
Identities = 22/74 (29%), Positives = 33/74 (44%), Gaps = 3/74 (4%)
Query: 44 PPCSAARISSSPGGLPPVLSRVHPSVPRSVSQRSL-MEALGSGHYVGGSIRSMAAAALSG 102
PP + A SPGG+P +H ++ R +QR S H ++ S AL+G
Sbjct: 186 PPLAGAPAGYSPGGVPSAYPELHAALDRLYAQRPAGFGCQESRHSYPPALGS--PGALAG 243
Query: 103 LAVRLSRPQGTRGS 116
V + P RG+
Sbjct: 244 AGVGAAGPLERRGA 257
>gi|169210256 PREDICTED: hypothetical protein [Homo sapiens]
Length = 447
Score = 29.3 bits (64), Expect = 1.5
Identities = 33/118 (27%), Positives = 43/118 (36%), Gaps = 23/118 (19%)
Query: 13 SKGHADPVGRGGTWQGASDRWGQSPAGKGGLP---PCSAARISSSPGGL---------PP 60
+KG A+ G G Q W Q P G+ P P A R S+ G+ P
Sbjct: 241 AKGCAEFYGSGARAQPGGPCWAQGPPGRLPDPIPLPTRAPRTSAGLAGVGSGAPGEPAEP 300
Query: 61 VLSRVHPSVPRSVSQRSLMEALGSGHYVG-GSIRSMAAAALSGLAVRLSRPQGTRGSY 117
+R S P S R +GS G G++ AA QG RGS+
Sbjct: 301 GRARAPRSAPSSREPRQTKRRVGSRARAGAGAVTGPCPAA----------AQGARGSW 348
>gi|239755715 PREDICTED: similar to hCG2002101 [Homo sapiens]
Length = 201
Score = 29.3 bits (64), Expect = 1.5
Identities = 23/90 (25%), Positives = 35/90 (38%), Gaps = 9/90 (10%)
Query: 21 GRGGTWQ--------GASDRWGQSPAGKGGLPPCSAARISSSPGGLPP-VLSRVHPSVPR 71
GR G W G WG +P G G S S G PP +S HP+
Sbjct: 110 GRPGDWLPNSGQDLGGTQGDWGPAPQGFGSRSGTSPGNQHGSSGSHPPEAVSGSHPTPAG 169
Query: 72 SVSQRSLMEALGSGHYVGGSIRSMAAAALS 101
S S + +G+ + ++R+ ++ S
Sbjct: 170 QSSDGSELPEVGARQGLCSTLRAQWSSRCS 199
>gi|239752750 PREDICTED: similar to protein phosphatase 2,
catalytic subunit, alpha [Homo sapiens]
Length = 384
Score = 29.3 bits (64), Expect = 1.5
Identities = 26/78 (33%), Positives = 34/78 (43%), Gaps = 10/78 (12%)
Query: 14 KGHADPVGRGGTWQGASDRWGQ----SPAGKGGLPPCSAARISSSPGGLPPVLSRVHPSV 69
+G +D RGG GA R Q +PA + PP S P PPV R P+
Sbjct: 12 RGRSDVRHRGG---GAIRRRAQLAPLTPARENRSPPGSLESAYLRPASDPPVSDRAGPAT 68
Query: 70 ---PRSVSQRSLMEALGS 84
PR+ S++ A GS
Sbjct: 69 RAEPRTASEQPRPHAPGS 86
>gi|156416026 zinc finger protein 219 [Homo sapiens]
Length = 722
Score = 29.3 bits (64), Expect = 1.5
Identities = 20/60 (33%), Positives = 27/60 (45%), Gaps = 3/60 (5%)
Query: 83 GSGHYV---GGSIRSMAAAALSGLAVRLSRPQGTRGSYGAFCKTLTRTLLTFFDLAWRLR 139
G GH G RS A +GL V +RP+G RG+ G C ++ + L LR
Sbjct: 459 GPGHSASAAGAQARSTATQEENGLLVGGTRPEGGRGATGKDCPFCGKSFRSAHHLKVHLR 518
>gi|156415998 zinc finger protein 219 [Homo sapiens]
Length = 722
Score = 29.3 bits (64), Expect = 1.5
Identities = 20/60 (33%), Positives = 27/60 (45%), Gaps = 3/60 (5%)
Query: 83 GSGHYV---GGSIRSMAAAALSGLAVRLSRPQGTRGSYGAFCKTLTRTLLTFFDLAWRLR 139
G GH G RS A +GL V +RP+G RG+ G C ++ + L LR
Sbjct: 459 GPGHSASAAGAQARSTATQEENGLLVGGTRPEGGRGATGKDCPFCGKSFRSAHHLKVHLR 518
>gi|156415996 zinc finger protein 219 [Homo sapiens]
Length = 722
Score = 29.3 bits (64), Expect = 1.5
Identities = 20/60 (33%), Positives = 27/60 (45%), Gaps = 3/60 (5%)
Query: 83 GSGHYV---GGSIRSMAAAALSGLAVRLSRPQGTRGSYGAFCKTLTRTLLTFFDLAWRLR 139
G GH G RS A +GL V +RP+G RG+ G C ++ + L LR
Sbjct: 459 GPGHSASAAGAQARSTATQEENGLLVGGTRPEGGRGATGKDCPFCGKSFRSAHHLKVHLR 518
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.323 0.137 0.429
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,742,738
Number of Sequences: 37866
Number of extensions: 338949
Number of successful extensions: 1646
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 64
Number of HSP's that attempted gapping in prelim test: 1586
Number of HSP's gapped (non-prelim): 124
length of query: 161
length of database: 18,247,518
effective HSP length: 94
effective length of query: 67
effective length of database: 14,688,114
effective search space: 984103638
effective search space used: 984103638
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 57 (26.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.