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Search of human proteins with 113430146
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|113430146 PREDICTED: hypothetical protein LOC729078 [Homo
sapiens]
(161 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|113430146 PREDICTED: hypothetical protein LOC729078 [Homo sap... 327 3e-90
gi|113430626 PREDICTED: hypothetical protein LOC729078 [Homo sap... 326 6e-90
gi|153945728 microtubule-associated protein 1B [Homo sapiens] 45 2e-05
gi|166235169 PRP38 pre-mRNA processing factor 38 (yeast) domain ... 45 3e-05
gi|169216709 PREDICTED: hypothetical protein [Homo sapiens] 45 4e-05
gi|221136769 hypothetical protein LOC100129239 [Homo sapiens] 45 4e-05
gi|7657218 bromodomain-containing protein 4 isoform short [Homo ... 42 2e-04
gi|19718731 bromodomain-containing protein 4 isoform long [Homo ... 42 2e-04
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens] 42 3e-04
gi|168229156 NFKB activating protein [Homo sapiens] 40 7e-04
gi|32483416 neurofilament, heavy polypeptide 200kDa [Homo sapiens] 40 7e-04
gi|104526627 triadin [Homo sapiens] 40 9e-04
gi|239750213 PREDICTED: hypothetical protein [Homo sapiens] 39 0.001
gi|50083281 KIAA1853 protein [Homo sapiens] 39 0.001
gi|56090620 NFKB activating protein-like [Homo sapiens] 39 0.002
gi|56676330 HP1-BP74 [Homo sapiens] 37 0.006
gi|54112403 chromodomain helicase DNA binding protein 7 [Homo sa... 37 0.007
gi|117676384 splicing factor, arginine/serine-rich 2, interactin... 37 0.010
gi|239508778 PREDICTED: hypothetical protein, partial [Homo sapi... 37 0.010
gi|117553580 adaptor-related protein complex 3, delta 1 subunit ... 36 0.013
gi|239752449 PREDICTED: hypothetical protein [Homo sapiens] 36 0.013
gi|239749449 PREDICTED: hypothetical protein [Homo sapiens] 36 0.013
gi|197927454 DEK oncogene isoform 2 [Homo sapiens] 36 0.013
gi|4503249 DEK oncogene isoform 1 [Homo sapiens] 36 0.013
gi|119372317 xin actin-binding repeat containing 2 isoform 1 [Ho... 36 0.013
gi|221219020 NYD-SP11 protein [Homo sapiens] 36 0.016
gi|125656165 THO complex 2 [Homo sapiens] 36 0.016
gi|156104889 myeloid/lymphoid or mixed-lineage leukemia (trithor... 36 0.016
gi|21040326 SON DNA-binding protein isoform F [Homo sapiens] 36 0.016
gi|21040314 SON DNA-binding protein isoform B [Homo sapiens] 36 0.016
>gi|113430146 PREDICTED: hypothetical protein LOC729078 [Homo
sapiens]
Length = 161
Score = 327 bits (838), Expect = 3e-90
Identities = 161/161 (100%), Positives = 161/161 (100%)
Query: 1 MAKETHTPVKPKENMKQPILSTKKPTPRTKEKKEKKNSSQQKTNKNGKVEKKIIKVKKPL 60
MAKETHTPVKPKENMKQPILSTKKPTPRTKEKKEKKNSSQQKTNKNGKVEKKIIKVKKPL
Sbjct: 1 MAKETHTPVKPKENMKQPILSTKKPTPRTKEKKEKKNSSQQKTNKNGKVEKKIIKVKKPL 60
Query: 61 QRNSRKKTQSPPSCSKKPRITMRPTIFVCHHKQNKTQHKNQKSKHKRQQKMKIRRASPEA 120
QRNSRKKTQSPPSCSKKPRITMRPTIFVCHHKQNKTQHKNQKSKHKRQQKMKIRRASPEA
Sbjct: 61 QRNSRKKTQSPPSCSKKPRITMRPTIFVCHHKQNKTQHKNQKSKHKRQQKMKIRRASPEA 120
Query: 121 AGKSKPSQVTISAASKCRAWIRSVQLATATLGNHQSHKGQS 161
AGKSKPSQVTISAASKCRAWIRSVQLATATLGNHQSHKGQS
Sbjct: 121 AGKSKPSQVTISAASKCRAWIRSVQLATATLGNHQSHKGQS 161
>gi|113430626 PREDICTED: hypothetical protein LOC729078 [Homo
sapiens]
Length = 161
Score = 326 bits (835), Expect = 6e-90
Identities = 160/161 (99%), Positives = 161/161 (100%)
Query: 1 MAKETHTPVKPKENMKQPILSTKKPTPRTKEKKEKKNSSQQKTNKNGKVEKKIIKVKKPL 60
MAKETHTPVKPKENMKQPILSTKKPTPRTKEKKEKKNSSQQKTNKNGKVEKKIIKVKKPL
Sbjct: 1 MAKETHTPVKPKENMKQPILSTKKPTPRTKEKKEKKNSSQQKTNKNGKVEKKIIKVKKPL 60
Query: 61 QRNSRKKTQSPPSCSKKPRITMRPTIFVCHHKQNKTQHKNQKSKHKRQQKMKIRRASPEA 120
QRNSRKKTQSPPSCSKKPRITMRPTIFVCHHKQNKTQHKNQKSKHKRQQKMKIRRASPEA
Sbjct: 61 QRNSRKKTQSPPSCSKKPRITMRPTIFVCHHKQNKTQHKNQKSKHKRQQKMKIRRASPEA 120
Query: 121 AGKSKPSQVTISAASKCRAWIRSVQLATATLGNHQSHKGQS 161
AGKSKPSQVTISAASKCRAWIR+VQLATATLGNHQSHKGQS
Sbjct: 121 AGKSKPSQVTISAASKCRAWIRNVQLATATLGNHQSHKGQS 161
>gi|153945728 microtubule-associated protein 1B [Homo sapiens]
Length = 2468
Score = 45.4 bits (106), Expect = 2e-05
Identities = 37/112 (33%), Positives = 57/112 (50%), Gaps = 10/112 (8%)
Query: 3 KETHTPVKPKENMKQPILSTKKPTPRTKEKKEKKNSSQQKTNKNGKVEKKIIKVKKPLQR 62
KE +K KE K+P KK TP + KKE K +++ K K KK IK K P
Sbjct: 682 KEVKKEIK-KEEKKEPKKEVKKETPPKEVKKEVKKEEKKEVKKEEKEPKKEIK-KLP--- 736
Query: 63 NSRKKTQSPPSCSKKPRITMRPTIFVCHHKQNKTQHKNQKSKHKRQQKMKIR 114
KK+ +P S +KKP ++P + K+ ++ K+ + K ++K KI+
Sbjct: 737 KDAKKSSTPLSEAKKP-AALKPKV----PKKEESVKKDSVAAGKPKEKGKIK 783
Score = 38.5 bits (88), Expect = 0.003
Identities = 33/126 (26%), Positives = 54/126 (42%), Gaps = 28/126 (22%)
Query: 7 TPVKP------KENMKQPILSTKKPTPRTKEKKEKKNSSQQKTNKNGKVEKKIIKVKKPL 60
T VKP KE K+ + + TP KE+K KK +++ K K E+K K+P
Sbjct: 642 TKVKPEDKKEEKEKPKKEVAKKEDKTPIKKEEKPKKEEVKKEVKKEIKKEEK----KEP- 696
Query: 61 QRNSRKKTQSPPSCSKKPRITMRPTIFVCHHKQNKTQHKNQKSKHKRQQKMKIRRASPEA 120
K ++PP K K+ K + K + K +++ K +I++ +A
Sbjct: 697 --KKEVKKETPPKEVK---------------KEVKKEEKKEVKKEEKEPKKEIKKLPKDA 739
Query: 121 AGKSKP 126
S P
Sbjct: 740 KKSSTP 745
Score = 34.7 bits (78), Expect = 0.036
Identities = 29/125 (23%), Positives = 54/125 (43%), Gaps = 20/125 (16%)
Query: 3 KETHTPVKPKENMKQPILSTKKPTPRTKEKKEKKNSSQQKTNKNGKVEKKIIKVK----- 57
K T KP K+ + S ++P+P E EK+ + + K KK KVK
Sbjct: 592 KPIKTETKPSVTEKE-VPSKEEPSPVKAEVAEKQATDVKPKAAKEKTVKKETKVKPEDKK 650
Query: 58 ----KPLQRNSRKKTQSPPSCSKKPRITMRPTIFVCHHKQNKTQHKNQKSKHKRQQKMKI 113
KP + ++K+ ++P +KP+ + K K K + K++ K ++
Sbjct: 651 EEKEKPKKEVAKKEDKTPIKKEEKPK----------KEEVKKEVKKEIKKEEKKEPKKEV 700
Query: 114 RRASP 118
++ +P
Sbjct: 701 KKETP 705
Score = 31.6 bits (70), Expect = 0.31
Identities = 22/79 (27%), Positives = 38/79 (48%), Gaps = 14/79 (17%)
Query: 7 TPVKPKENMKQPILSTKKPTPRTKEKKEKKNSSQQKTNKN-----GKVEKK---IIKVKK 58
T +K + + ++ + KP P +KE K + + T N KVE K ++K K
Sbjct: 533 TKLKQRADSRESLKPAAKPLPSKSVRKESKEETPEVTKVNHVEKPPKVESKEKVMVKKDK 592
Query: 59 PLQRNSRKKTQSPPSCSKK 77
P+ KT++ PS ++K
Sbjct: 593 PI------KTETKPSVTEK 605
>gi|166235169 PRP38 pre-mRNA processing factor 38 (yeast) domain
containing B [Homo sapiens]
Length = 546
Score = 45.1 bits (105), Expect = 3e-05
Identities = 35/117 (29%), Positives = 54/117 (46%), Gaps = 26/117 (22%)
Query: 23 KKPTPRTKEKKEK-KNSSQQKTNKNGK---------VEKKIIKVKKPLQRNSRKKTQSPP 72
K+ R+KEK K KN S++K+NK + VEK + P + SRK+++S
Sbjct: 446 KRSRSRSKEKSSKHKNESKEKSNKRSRSGSQGRTDSVEKSKKREHSPSKEKSRKRSRS-- 503
Query: 73 SCSKKPRITMRPTIFVCHHKQNKTQHKNQKSKHKRQQKMKIRRASPEAAGKSKPSQV 129
K R HK++ + K+Q KH R++ I + S E K+K V
Sbjct: 504 ----KER----------SHKRDHSDSKDQSDKHDRRRSQSIEQESQEKQHKNKDETV 546
Score = 30.0 bits (66), Expect = 0.90
Identities = 17/94 (18%), Positives = 42/94 (44%)
Query: 35 KKNSSQQKTNKNGKVEKKIIKVKKPLQRNSRKKTQSPPSCSKKPRITMRPTIFVCHHKQN 94
+KN QQ + K++K + + + R+ ++ P S PR + R + HH++
Sbjct: 226 QKNIDQQIKTRPRKIKKDGKEGAEEIDRHVERRRSRSPRRSLSPRRSPRRSRSRSHHREG 285
Query: 95 KTQHKNQKSKHKRQQKMKIRRASPEAAGKSKPSQ 128
+ + +++ ++ R + E + + S+
Sbjct: 286 HGSSSFDRELEREKERQRLEREAKEREKERRRSR 319
>gi|169216709 PREDICTED: hypothetical protein [Homo sapiens]
Length = 108
Score = 44.7 bits (104), Expect = 4e-05
Identities = 29/108 (26%), Positives = 51/108 (47%), Gaps = 4/108 (3%)
Query: 1 MAKETHTPVKPKENMKQPILSTKKPTPRTKEKKEKKNSSQQKTNKNGKVEKKIIKVKKPL 60
MAK T P KP E++ + ST TK +K+ K Q+++ K K K K+PL
Sbjct: 1 MAKVTSEPQKPNEDVDEQTPSTSS----TKGRKKGKTPRQRRSRSGVKGLKTTRKAKRPL 56
Query: 61 QRNSRKKTQSPPSCSKKPRITMRPTIFVCHHKQNKTQHKNQKSKHKRQ 108
+ +S +K + + KP+ P + +H+ + K + K + +
Sbjct: 57 RGSSSQKAGETNTPAGKPKKARGPILRGRYHRLKEKMKKEEADKEQSE 104
Score = 27.3 bits (59), Expect = 5.8
Identities = 14/43 (32%), Positives = 23/43 (53%)
Query: 2 AKETHTPVKPKENMKQPILSTKKPTPRTKEKKEKKNSSQQKTN 44
A ET+TP + + PIL + + K KKE+ + Q +T+
Sbjct: 64 AGETNTPAGKPKKARGPILRGRYHRLKEKMKKEEADKEQSETS 106
>gi|221136769 hypothetical protein LOC100129239 [Homo sapiens]
Length = 108
Score = 44.7 bits (104), Expect = 4e-05
Identities = 29/108 (26%), Positives = 51/108 (47%), Gaps = 4/108 (3%)
Query: 1 MAKETHTPVKPKENMKQPILSTKKPTPRTKEKKEKKNSSQQKTNKNGKVEKKIIKVKKPL 60
MAK T P KP E++ + ST TK +K+ K Q+++ K K K K+PL
Sbjct: 1 MAKVTSEPQKPNEDVDEQTPSTSS----TKGRKKGKTPRQRRSRSGVKGLKTTRKAKRPL 56
Query: 61 QRNSRKKTQSPPSCSKKPRITMRPTIFVCHHKQNKTQHKNQKSKHKRQ 108
+ +S +K + + KP+ P + +H+ + K + K + +
Sbjct: 57 RGSSSQKAGETNTPAGKPKKARGPILRGRYHRLKEKMKKEEADKEQSE 104
Score = 27.3 bits (59), Expect = 5.8
Identities = 14/43 (32%), Positives = 23/43 (53%)
Query: 2 AKETHTPVKPKENMKQPILSTKKPTPRTKEKKEKKNSSQQKTN 44
A ET+TP + + PIL + + K KKE+ + Q +T+
Sbjct: 64 AGETNTPAGKPKKARGPILRGRYHRLKEKMKKEEADKEQSETS 106
>gi|7657218 bromodomain-containing protein 4 isoform short [Homo
sapiens]
Length = 722
Score = 42.0 bits (97), Expect = 2e-04
Identities = 27/100 (27%), Positives = 45/100 (45%), Gaps = 2/100 (2%)
Query: 24 KPTPRTKEKKEKKNSSQQKTNKNGKVEKKIIKVKKPLQRNSRKKTQSPPSCSKKPRITMR 83
KP + K+KKEKK ++ K E K K K+P + ++K S + SKK M+
Sbjct: 535 KPKKKEKDKKEKKKEKHKR--KEEVEENKKSKAKEPPPKKTKKNNSSNSNVSKKEPAPMK 592
Query: 84 PTIFVCHHKQNKTQHKNQKSKHKRQQKMKIRRASPEAAGK 123
+ + + + K + KRQ + I + E G+
Sbjct: 593 SKPPPTYESEEEDKCKPMSYEEKRQLSLDINKLPGEKLGR 632
>gi|19718731 bromodomain-containing protein 4 isoform long [Homo
sapiens]
Length = 1362
Score = 42.0 bits (97), Expect = 2e-04
Identities = 27/100 (27%), Positives = 45/100 (45%), Gaps = 2/100 (2%)
Query: 24 KPTPRTKEKKEKKNSSQQKTNKNGKVEKKIIKVKKPLQRNSRKKTQSPPSCSKKPRITMR 83
KP + K+KKEKK ++ K E K K K+P + ++K S + SKK M+
Sbjct: 535 KPKKKEKDKKEKKKEKHKR--KEEVEENKKSKAKEPPPKKTKKNNSSNSNVSKKEPAPMK 592
Query: 84 PTIFVCHHKQNKTQHKNQKSKHKRQQKMKIRRASPEAAGK 123
+ + + + K + KRQ + I + E G+
Sbjct: 593 SKPPPTYESEEEDKCKPMSYEEKRQLSLDINKLPGEKLGR 632
Score = 30.4 bits (67), Expect = 0.69
Identities = 24/134 (17%), Positives = 61/134 (45%), Gaps = 10/134 (7%)
Query: 3 KETHTPVKPKENMKQPILST------KKPTPRTKEKKEKKNSSQQ--KTNKNGKVEKKII 54
+E TPV PK+++K + + K PT + K +S +Q + + + +K +
Sbjct: 1182 QEPKTPVAPKKDLKIKNMGSWASLVQKHPTTPSSTAKSSSDSFEQFRRAAREKEEREKAL 1241
Query: 55 KVKKPLQRNSRKKTQSPPSCSKKPRITMRPTIFVCHHKQNKTQHKNQKSKHKRQQKMKIR 114
K + +++ + S++ + H++ + + + Q+ + + QQ+ + +
Sbjct: 1242 KAQAEHAEKEKERLRQERMRSREDEDALEQARRA--HEEARRRQEQQQQQRQEQQQQQQQ 1299
Query: 115 RASPEAAGKSKPSQ 128
+A+ AA + +Q
Sbjct: 1300 QAAAVAAAATPQAQ 1313
>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
Length = 2752
Score = 41.6 bits (96), Expect = 3e-04
Identities = 35/128 (27%), Positives = 59/128 (46%), Gaps = 26/128 (20%)
Query: 8 PVKPKENMKQPILSTKKPTPRTKEKKEKKNSSQQKTNKNGKVEKKIIKVKKPLQRNSRKK 67
P KP +++ S++ PTP+ K+KK+KK+ ++ + + + E+K ++S+KK
Sbjct: 167 PPKPYSLVRESS-SSRSPTPKQKKKKKKKDRGRRSESSSPRRERK---------KSSKKK 216
Query: 68 TQSPPSCSKKPRITMRPTIFVCHHKQNKTQHKNQKSKHKRQQKMKIRRASPEAAGKSKPS 127
S SKK K + KSK K + K + R S A KS+ +
Sbjct: 217 KHRSESESKK----------------RKHRSPTPKSKRKSKDKKRKRSRSTTPAPKSRRA 260
Query: 128 QVTISAAS 135
+ SA S
Sbjct: 261 HRSTSADS 268
>gi|168229156 NFKB activating protein [Homo sapiens]
Length = 415
Score = 40.4 bits (93), Expect = 7e-04
Identities = 30/125 (24%), Positives = 58/125 (46%), Gaps = 10/125 (8%)
Query: 4 ETHTPVKPKENMKQPILSTKKPTPRTKEKKEKKNSSQQKTNKNGKVEKKIIKVKKPLQRN 63
+ HTPV+ +E K ST + +EKK+K + S++++ K K + K KK + +
Sbjct: 158 DEHTPVEDEEPKK----STTSASTSEEEKKKKSSRSKERSKKRRKKKSSKRKHKKYSEDS 213
Query: 64 SRKKTQSPPSCSKKPRITMRPTIFVCHHKQNKTQHKNQKSKHKRQQKMKIRRASPEAAGK 123
S + + + K+ K +H+++K K KR +K R+ S +++ K
Sbjct: 214 DSDSDSETDSSDEDNKRRAKK----AKKKEKKKKHRSKKYKKKRSKKS--RKESSDSSSK 267
Query: 124 SKPSQ 128
+
Sbjct: 268 ESQEE 272
>gi|32483416 neurofilament, heavy polypeptide 200kDa [Homo sapiens]
Length = 1020
Score = 40.4 bits (93), Expect = 7e-04
Identities = 31/131 (23%), Positives = 57/131 (43%), Gaps = 13/131 (9%)
Query: 2 AKETHTPVKPKENMKQPILSTKKPTPRTKEKKEKKNSSQQKTNKNGKVEKKIIKVKKPLQ 61
AK + KE +K P+ +KP K K+ K + ++K K E+K
Sbjct: 807 AKAPEKEIPKKEEVKSPVKEEEKPQ-EVKVKEPPKKAEEEKAPATPKTEEK--------- 856
Query: 62 RNSRKKTQSPPSCSKKPRITMRPTIFVCHHKQNKTQHKNQKSKHKRQ--QKMKIRRASPE 119
KK ++P + KP++ + V K++K + K ++++ K++ K A E
Sbjct: 857 -KDSKKEEAPKKEAPKPKVEEKKEPAVEKPKESKVEAKKEEAEDKKKVPTPEKEAPAKVE 915
Query: 120 AAGKSKPSQVT 130
+KP + T
Sbjct: 916 VKEDAKPKEKT 926
Score = 34.3 bits (77), Expect = 0.048
Identities = 30/140 (21%), Positives = 56/140 (40%), Gaps = 15/140 (10%)
Query: 3 KETHTPVKPKENMKQPILSTKKPTPRTKEKKEKKNSSQQKTNKNGKVEKKII----KVKK 58
+E +P K K K L K P +T K+E ++ + + K K+ + K K
Sbjct: 742 EEAKSPEKAKSPEKAKTLDVKSPEAKTPAKEEARSPADKFPEKAKSPVKEEVKSPEKAKS 801
Query: 59 PLQRNS---------RKKTQSPPSCSKKPR--ITMRPTIFVCHHKQNKTQHKNQKSKHKR 107
PL+ ++ +++ +SP +KP+ P K T +K K+
Sbjct: 802 PLKEDAKAPEKEIPKKEEVKSPVKEEEKPQEVKVKEPPKKAEEEKAPATPKTEEKKDSKK 861
Query: 108 QQKMKIRRASPEAAGKSKPS 127
++ K P+ K +P+
Sbjct: 862 EEAPKKEAPKPKVEEKKEPA 881
Score = 29.6 bits (65), Expect = 1.2
Identities = 33/132 (25%), Positives = 46/132 (34%), Gaps = 20/132 (15%)
Query: 3 KETHTPVKP------------KENMKQPILSTKKPTPRTKEKKEKKNSSQQKTNKNGKVE 50
KE +PVK KE K P K P KE+ S + + +
Sbjct: 514 KEAKSPVKEEAKSPAEAKSPEKEEAKSPA-EVKSPEKAKSPAKEEAKSPPEAKSPEKEEA 572
Query: 51 KKIIKVKKPLQRNSRKKTQS-PPSCSKKPRITMRPTIFVCHHKQNKTQHKNQKSKHKRQQ 109
K +VK P + S K ++ P+ +K P P K+ KS K +
Sbjct: 573 KSPAEVKSPEKAKSPAKEEAKSPAEAKSPEKAKSPV------KEEAKSPAEAKSPVKEEA 626
Query: 110 KMKIRRASPEAA 121
K SPE A
Sbjct: 627 KSPAEVKSPEKA 638
Score = 29.6 bits (65), Expect = 1.2
Identities = 24/79 (30%), Positives = 34/79 (43%), Gaps = 10/79 (12%)
Query: 2 AKETHTPVKPKENMKQPILSTKKPTPRTKEKKEKKNSSQQKTNKNGKVEKKII--KVKKP 59
AKE P + KE + KK TKE+K KK + KT K + K + + KP
Sbjct: 938 AKEPSKPAEKKEAAPE-----KKD---TKEEKAKKPEEKPKTEAKAKEDDKTLSKEPSKP 989
Query: 60 LQRNSRKKTQSPPSCSKKP 78
+ K + + SK P
Sbjct: 990 KAEKAEKSSSTDQKDSKPP 1008
Score = 28.5 bits (62), Expect = 2.6
Identities = 29/119 (24%), Positives = 48/119 (40%), Gaps = 14/119 (11%)
Query: 4 ETHTPVKPKENMKQPILSTKKPTPRTKEK---KEKKNSSQQKTNKNGKVEKKIIKVKKPL 60
E +PVK + + S +K TKE+ EK S +++ K+ + K +K
Sbjct: 617 EAKSPVKEEAKSPAEVKSPEKAKSPTKEEAKSPEKAKSPEKEEAKSPEKAKSPVKA---- 672
Query: 61 QRNSRKKTQSPPSC-SKKPRITMRPTIFVCHHKQNKTQHKNQKSKHKRQQKMKIRRASP 118
+ S +K +SP +K P P K+ + KS K + K + SP
Sbjct: 673 EAKSPEKAKSPVKAEAKSPEKAKSPV------KEEAKSPEKAKSPVKEEAKSPEKAKSP 725
Score = 27.7 bits (60), Expect = 4.5
Identities = 27/125 (21%), Positives = 41/125 (32%), Gaps = 11/125 (8%)
Query: 4 ETHTPVKPKENMKQPILSTKKPTPRTKEKKEKKNSSQQKTNKNGKVEKKIIKVKKPLQRN 63
E T P E P K P + + S +++ K+ K K K P
Sbjct: 498 EEETKSPPAEEAASPEKEAKSPVKEEAKSPAEAKSPEKEEAKSPAEVKSPEKAKSPA--- 554
Query: 64 SRKKTQSPPSC-------SKKPRITMRPTIFVCHHKQNKTQHKNQKSKHKRQQKMKIRRA 116
+++ +SPP +K P P K+ KS K + +K
Sbjct: 555 -KEEAKSPPEAKSPEKEEAKSPAEVKSPEKAKSPAKEEAKSPAEAKSPEKAKSPVKEEAK 613
Query: 117 SPEAA 121
SP A
Sbjct: 614 SPAEA 618
>gi|104526627 triadin [Homo sapiens]
Length = 729
Score = 40.0 bits (92), Expect = 9e-04
Identities = 41/171 (23%), Positives = 70/171 (40%), Gaps = 43/171 (25%)
Query: 3 KETHTPVKPKENMKQPILSTKKPTPRTKEKKEKKNSSQ---------------------- 40
KE K E M + K P+ + KKE+K Q
Sbjct: 488 KEKEPETKKDEKMSKAGKEVKPKPPQLQGKKEEKPEPQIKKEAKPAISEKVQIHKQDIVK 547
Query: 41 -QKTNKNGKVEKKIIK-VK----------KPLQRNSRKKTQSPPSCSKKPRITMRPTIFV 88
+KT +GK E+K++K VK KP ++ ++ + P + KP+ T + T V
Sbjct: 548 PEKTVSHGKPEEKVLKQVKAVTIEKTAKPKPTKKAEHREREPPSIKTDKPKPTPKGTSEV 607
Query: 89 CHHKQNKTQHKNQKS------KHKRQQKMKIRRASPE---AAGKSKPSQVT 130
+ KT+ ++S KH R++K+ R+ S + KP++V+
Sbjct: 608 TESGKKKTEISEKESKEKADMKHLREEKVSTRKESLQLHNVTKAEKPARVS 658
Score = 35.0 bits (79), Expect = 0.028
Identities = 33/127 (25%), Positives = 54/127 (42%), Gaps = 5/127 (3%)
Query: 3 KETHTPVKPKENMKQPILSTKKPTPRTKEKKEKKNSSQQKTNKNGKVEKKIIKVKKPLQR 62
KE H K+ + + TK T + KEK ++K ++K K ++KI K +KP +
Sbjct: 141 KEIHKDKTEKQEKPERKIQTKV-THKEKEKGKEKVREKEKPEKKATHKEKIEKKEKPETK 199
Query: 63 NSRKKTQSPPSCSKKPRITMRPTIFVCHHKQNKTQHKNQKSKHKRQQKMKIR-RASPEAA 121
K+ + + K T + V KQ K + K K ++ K + + E A
Sbjct: 200 TLAKEQKKAKTAEKSEEKTKKE---VKGGKQEKVKQTAAKVKEVQKTPSKPKEKEDKEKA 256
Query: 122 GKSKPSQ 128
SK Q
Sbjct: 257 AVSKHEQ 263
Score = 33.9 bits (76), Expect = 0.062
Identities = 37/123 (30%), Positives = 58/123 (47%), Gaps = 15/123 (12%)
Query: 9 VKPK-ENMKQPI--LSTKKPTPRTKEKKEKKNSSQQ-KTNKNGKVEKKIIKVKKPLQRNS 64
VK K E K+ I +S KK P KE+K K Q+ + K+GK I+K K+P++
Sbjct: 422 VKAKTERAKEEIGAVSIKKAVPGKKEEKTTKTVEQEIRKEKSGKT-SSILKDKEPIK--- 477
Query: 65 RKKTQSPPSCSKKPRITMRPTIFVCHHKQNKTQHKNQKSKHKRQQKMKIRRASPEAAGKS 124
K+ + P S +K T + K +K K K K + Q K + P+ ++
Sbjct: 478 GKEEKVPASLKEKEPETKK------DEKMSKA-GKEVKPKPPQLQGKKEEKPEPQIKKEA 530
Query: 125 KPS 127
KP+
Sbjct: 531 KPA 533
Score = 31.6 bits (70), Expect = 0.31
Identities = 34/154 (22%), Positives = 65/154 (42%), Gaps = 17/154 (11%)
Query: 18 PILSTKKPTPRT----KEKKEKKNSSQQKTNKNGKVEKKIIKVKKPLQRNSRKKTQSPPS 73
P +PTP + +++ EKK + ++ T++ K EK+ IK K + + + P
Sbjct: 295 PTEQASRPTPASPALEEKEGEKKKAEKKVTSETKKKEKEDIKKKSEKETAIDVEKKEPGK 354
Query: 74 CSKKPRITMRPTIFVCHHKQNKTQHKN--------QKSKHKRQQKMKIRRASPEAAGK-- 123
S+ + T++ K K + ++ K K+Q+K K + P + K
Sbjct: 355 ASETKQGTVKIAAQAAAKKDEKKEDSKKTKKPAEVEQPKGKKQEK-KEKHVEPAKSPKKE 413
Query: 124 -SKPSQVTISA-ASKCRAWIRSVQLATATLGNHQ 155
S PS + A + + I +V + A G +
Sbjct: 414 HSVPSDKQVKAKTERAKEEIGAVSIKKAVPGKKE 447
Score = 30.0 bits (66), Expect = 0.90
Identities = 23/82 (28%), Positives = 36/82 (43%), Gaps = 13/82 (15%)
Query: 8 PVKPKENMKQ--PILSTKKPTPRTKEKKEKKNSSQQKTNKNGKV-----------EKKII 54
P K E+ ++ P + T KP P K E S ++KT + K E+K+
Sbjct: 578 PTKKAEHREREPPSIKTDKPKPTPKGTSEVTESGKKKTEISEKESKEKADMKHLREEKVS 637
Query: 55 KVKKPLQRNSRKKTQSPPSCSK 76
K+ LQ ++ K + P SK
Sbjct: 638 TRKESLQLHNVTKAEKPARVSK 659
Score = 26.9 bits (58), Expect = 7.6
Identities = 29/129 (22%), Positives = 53/129 (41%), Gaps = 15/129 (11%)
Query: 3 KETHTPVKPKENMKQPILSTKKPTPRTKEKKEKKNSSQQKTNKNGKVEKKIIK-VKKPLQ 61
KE H + + S K+ +T+ KE+ + K GK E+K K V++ ++
Sbjct: 400 KEKHVEPAKSPKKEHSVPSDKQVKAKTERAKEEIGAVSIKKAVPGKKEEKTTKTVEQEIR 459
Query: 62 RNSRKKTQS-----PPSCSKKPRITMRPTIFVCHHKQNKTQHKNQKSKHKRQQKMKIRRA 116
+ KT S P K+ ++ K+ +T+ + SK ++ K K
Sbjct: 460 KEKSGKTSSILKDKEPIKGKEEKVPAS-----LKEKEPETKKDEKMSKAGKEVKPK---- 510
Query: 117 SPEAAGKSK 125
P+ GK +
Sbjct: 511 PPQLQGKKE 519
>gi|239750213 PREDICTED: hypothetical protein [Homo sapiens]
Length = 248
Score = 39.3 bits (90), Expect = 0.001
Identities = 31/125 (24%), Positives = 58/125 (46%), Gaps = 8/125 (6%)
Query: 29 TKEKKEKKNSSQQKTNKNGKVEKKIIKVKKPLQRNSRKKTQSPPSCSKKPRITMRPTIFV 88
T+++ K ++KT K K +K +K KK + ++KKT + K+ T + T
Sbjct: 17 TEKESAWKRGRKKKTTKKKKKKKTTMKKKK--KTTTKKKTTT--KTKKRTTTTKKTTTTT 72
Query: 89 CHHKQNKTQHKNQKSKHKRQQKMKIRRASPEAAGKSKPSQVTISAASKCRAWIRS-VQLA 147
K+ + + + +K K K ++K K ++ + K K ++ A C I S ++
Sbjct: 73 TKEKEKEKEKEKEKEKEKEKEKEKEKKKKKKKKKKKKKKKLN---AKVCGLEIASWSEMT 129
Query: 148 TATLG 152
TA G
Sbjct: 130 TAAAG 134
Score = 38.9 bits (89), Expect = 0.002
Identities = 21/65 (32%), Positives = 35/65 (53%)
Query: 3 KETHTPVKPKENMKQPILSTKKPTPRTKEKKEKKNSSQQKTNKNGKVEKKIIKVKKPLQR 62
K+T T K K+ +TKK T T ++KEK+ +++ K + EK+ K KK ++
Sbjct: 46 KKTTTKKKTTTKTKKRTTTTKKTTTTTTKEKEKEKEKEKEKEKEKEKEKEKEKKKKKKKK 105
Query: 63 NSRKK 67
+KK
Sbjct: 106 KKKKK 110
Score = 34.7 bits (78), Expect = 0.036
Identities = 29/143 (20%), Positives = 66/143 (46%), Gaps = 4/143 (2%)
Query: 15 MKQPILSTKKPTPRTKEKKEKKNSSQQKTNKNGKVEKKIIKVKKPLQRNSRK--KTQSPP 72
M++ + T+K + + +K+K ++K K +KK KK + ++ T+
Sbjct: 10 MEKVHVITEKESAWKRGRKKKTTKKKKKKKTTMKKKKKTTTKKKTTTKTKKRTTTTKKTT 69
Query: 73 SCSKKPRITMRPTIFVCHHKQNKTQHKNQKSKHKRQQKMKIRRASPEAAGK--SKPSQVT 130
+ + K + + ++ K + K +K K K+++K K ++ + + G + S++T
Sbjct: 70 TTTTKEKEKEKEKEKEKEKEKEKEKEKEKKKKKKKKKKKKKKKLNAKVCGLEIASWSEMT 129
Query: 131 ISAASKCRAWIRSVQLATATLGN 153
+AA + VQ A ++ N
Sbjct: 130 TAAAGEGEEQGSMVQAAGVSISN 152
Score = 33.9 bits (76), Expect = 0.062
Identities = 17/51 (33%), Positives = 26/51 (50%)
Query: 3 KETHTPVKPKENMKQPILSTKKPTPRTKEKKEKKNSSQQKTNKNGKVEKKI 53
K T T K KE K+ +K + KEK++KK ++K K K+ K+
Sbjct: 67 KTTTTTTKEKEKEKEKEKEKEKEKEKEKEKEKKKKKKKKKKKKKKKLNAKV 117
>gi|50083281 KIAA1853 protein [Homo sapiens]
Length = 611
Score = 39.3 bits (90), Expect = 0.001
Identities = 24/92 (26%), Positives = 44/92 (47%), Gaps = 13/92 (14%)
Query: 25 PTPRTKEKKEKKNSSQQKTNKNGKVEKKIIKVKKPLQRNSRKKTQSPPSCSKKPRITMRP 84
P P ++ KK+KK S+++K ++ +K KK + S KK + S SKK R
Sbjct: 102 PPPSSRGKKKKKKSTRKKRRRSSSYSPSPVKKKK---KKSSKKHKRRRSFSKKRR----- 153
Query: 85 TIFVCHHKQNKTQHKNQKSKHKRQQKMKIRRA 116
H + + + +HK+Q + + R++
Sbjct: 154 -----HSSSSPKSKRRDEKRHKKQSRSRPRKS 180
Score = 36.6 bits (83), Expect = 0.010
Identities = 34/145 (23%), Positives = 60/145 (41%), Gaps = 24/145 (16%)
Query: 7 TPVKPKENMKQPILSTKK-----------PTPRTKEKKEKKNSSQQKTNKNGKVEKKIIK 55
TP K+ ST+K P + K+K KK+ ++ +K + K
Sbjct: 101 TPPPSSRGKKKKKKSTRKKRRRSSSYSPSPVKKKKKKSSKKHKRRRSFSKKRRHSSSSPK 160
Query: 56 VKKPLQRNSRKKTQSPPSCSKKPR----------ITMRPTIFVCHHKQNKTQHKNQKS-- 103
K+ ++ +K+++S P S + R RP+ H+ ++ + QKS
Sbjct: 161 SKRRDEKRHKKQSRSRPRKSHRHRHHRCPSRSQSSESRPSSCESRHR-GRSPEEGQKSRR 219
Query: 104 KHKRQQKMKIRRASPEAAGKSKPSQ 128
+H R+ + + SPEA PSQ
Sbjct: 220 RHSRRCSKTLCKDSPEAQSSRPPSQ 244
>gi|56090620 NFKB activating protein-like [Homo sapiens]
Length = 402
Score = 38.9 bits (89), Expect = 0.002
Identities = 29/107 (27%), Positives = 46/107 (42%), Gaps = 9/107 (8%)
Query: 4 ETHTPVKPKENMKQPILSTKKPTPRTKEKKEKKNSSQQKTNKNGKVEKKIIKVKKPLQRN 63
+ HTPV+ +E + S+ KK+ S +K KN ++K K N
Sbjct: 149 DEHTPVEDEEEVTHQKSSSSDSNSEEHRKKKTSRSRNKKKRKNKSSKRKHRKYSDS-DSN 207
Query: 64 SRKKTQSPPSCSKKPRITMRPTIFVCHHKQNKTQHKNQKSKHKRQQK 110
S T S KK R+ + K+ K +HK +K K+K+ +K
Sbjct: 208 SESDTNSDSDDDKK-RVKAKK-------KKKKKKHKTKKKKNKKTKK 246
Score = 26.6 bits (57), Expect = 9.9
Identities = 12/28 (42%), Positives = 18/28 (64%)
Query: 23 KKPTPRTKEKKEKKNSSQQKTNKNGKVE 50
KK K+KK+KK+ +++K NK K E
Sbjct: 220 KKRVKAKKKKKKKKHKTKKKKNKKTKKE 247
>gi|56676330 HP1-BP74 [Homo sapiens]
Length = 553
Score = 37.4 bits (85), Expect = 0.006
Identities = 24/91 (26%), Positives = 50/91 (54%), Gaps = 12/91 (13%)
Query: 2 AKETHTPVKPKENMKQPILSTK----KPTPRTKEKKEKKNSSQQKTNKNGKVEKKIIKVK 57
++E+ + V+ +EN P S++ K P +EK+E K+S + K ++ + ++K KVK
Sbjct: 71 SEESVSTVEEQENETPPATSSEAEQPKGEPENEEKEENKSSEETKKDEKDQSKEKEKKVK 130
Query: 58 KPL--------QRNSRKKTQSPPSCSKKPRI 80
K + + +R + Q+P + S +P++
Sbjct: 131 KTIPSWATLSASQLARAQKQTPMASSPRPKM 161
>gi|54112403 chromodomain helicase DNA binding protein 7 [Homo
sapiens]
Length = 2997
Score = 37.0 bits (84), Expect = 0.007
Identities = 35/131 (26%), Positives = 56/131 (42%), Gaps = 8/131 (6%)
Query: 3 KETHTPVKPKENMKQPILSTKKPTPRTKEKKEKKNSSQQKTNKNGKVEKKIIKVKKPLQR 62
KE TP PK + K TP K K KK+S+++ ++ ++KK+ K K
Sbjct: 666 KEPKTPKAPKIPKEPKEKKAKTATP--KPKSSKKSSNKKPDSEASALKKKVNKGKTEGSE 723
Query: 63 NSRKKTQSPPSCSKKPRITMRPTIFVCHHKQNKTQHKNQKSKHKRQQKMKIRRA-SPEAA 121
NS PP S P P + +++ Q K ++ + K+ A +AA
Sbjct: 724 NSDLDKTPPP--SPPPEEDEDPGV---QKRRSSRQVKRKRYTEDLEFKISDEEADDADAA 778
Query: 122 GKSKPSQVTIS 132
G+ PS + S
Sbjct: 779 GRDSPSNTSQS 789
Score = 31.2 bits (69), Expect = 0.40
Identities = 26/98 (26%), Positives = 38/98 (38%), Gaps = 1/98 (1%)
Query: 23 KKPTPRTKEKKEKKNSSQQKTNKNGKVEKKIIKVKKPLQRNSRK-KTQSPPSCSKKPRIT 81
KK R+K KK+ K + K K K K K P + +K KT +P S K
Sbjct: 641 KKKKKRSKAKKDPKEPKEPKEKKEPKEPKTPKAPKIPKEPKEKKAKTATPKPKSSKKSSN 700
Query: 82 MRPTIFVCHHKQNKTQHKNQKSKHKRQQKMKIRRASPE 119
+P K+ + K + S++ K PE
Sbjct: 701 KKPDSEASALKKKVNKGKTEGSENSDLDKTPPPSPPPE 738
Score = 30.8 bits (68), Expect = 0.53
Identities = 25/95 (26%), Positives = 40/95 (42%), Gaps = 8/95 (8%)
Query: 30 KEKKEKKNSSQQKTNKNGKVEKKIIKVKKPLQRNSRKKTQSPPSCSKKPRITMRPTIFVC 89
+EKK+KK S +K K K K+ + K+P KT P K+P+ T
Sbjct: 639 EEKKKKKRSKAKKDPKEPKEPKEKKEPKEP-------KTPKAPKIPKEPKEKKAKTATPK 691
Query: 90 HHKQNKTQHKNQKSKHKRQQKMKIRRASPEAAGKS 124
K+ +K S+ +K K+ + E + S
Sbjct: 692 PKSSKKSSNKKPDSEASALKK-KVNKGKTEGSENS 725
Score = 28.9 bits (63), Expect = 2.0
Identities = 21/95 (22%), Positives = 36/95 (37%)
Query: 32 KKEKKNSSQQKTNKNGKVEKKIIKVKKPLQRNSRKKTQSPPSCSKKPRITMRPTIFVCHH 91
++EKK + K K+ K K+ + K+P + + K + P +K T P
Sbjct: 638 QEEKKKKKRSKAKKDPKEPKEPKEKKEPKEPKTPKAPKIPKEPKEKKAKTATPKPKSSKK 697
Query: 92 KQNKTQHKNQKSKHKRQQKMKIRRASPEAAGKSKP 126
NK + K+ K K + K+ P
Sbjct: 698 SSNKKPDSEASALKKKVNKGKTEGSENSDLDKTPP 732
>gi|117676384 splicing factor, arginine/serine-rich 2, interacting
protein [Homo sapiens]
Length = 1463
Score = 36.6 bits (83), Expect = 0.010
Identities = 34/150 (22%), Positives = 65/150 (43%), Gaps = 12/150 (8%)
Query: 3 KETHTPVKPKENMKQPILSTKKPTPRTKEKKEKKNSSQQKTNKNGKVEKKIIKVKKPLQR 62
++ T +P E+ K I TKKP RT+ + S+ NK+ EKK + P +
Sbjct: 765 EKVETVSQPSESPKDTIDKTKKP--RTRRSRFHSPSTTWSPNKDTPQEKKRPQSPSPRRE 822
Query: 63 NSR--KKTQSP-----PSCSKKPRITMRPTIFVCHHK---QNKTQHKNQKSKHKRQQKMK 112
+ +K+QSP + +K + P + + Q+++ ++ + +R + +
Sbjct: 823 TGKESRKSQSPSPKNESARGRKKSRSQSPKKDIARERRQSQSRSPKRDTTRESRRSESLS 882
Query: 113 IRRASPEAAGKSKPSQVTISAASKCRAWIR 142
RR + +S+P S K R+ R
Sbjct: 883 PRRETSRENKRSQPRVKDSSPGEKSRSQSR 912
>gi|239508778 PREDICTED: hypothetical protein, partial [Homo
sapiens]
Length = 123
Score = 36.6 bits (83), Expect = 0.010
Identities = 25/121 (20%), Positives = 57/121 (47%), Gaps = 1/121 (0%)
Query: 10 KPKENMKQPILSTKKPTPRTKEKKEKKNSSQQKTNKNGKVEKKIIKVKKPLQRNSRKKTQ 69
K K+ K+ T++ T T+E++EK+ ++K + K ++K K K+ +R +++ +
Sbjct: 1 KKKKKKKKETEETEE-TEETEEEEEKEGKRKEKRKEKRKEKEKKKKTKETEKRKEKEEEE 59
Query: 70 SPPSCSKKPRITMRPTIFVCHHKQNKTQHKNQKSKHKRQQKMKIRRASPEAAGKSKPSQV 129
+K + ++ + + + ++ +R++K K RR E K K +
Sbjct: 60 KKRKRKRKKKKEEEEREEEEEEEEEEKEEEEKEEGRRRKKKKKRRRKEEEEEKKKKRRRK 119
Query: 130 T 130
T
Sbjct: 120 T 120
Score = 33.5 bits (75), Expect = 0.081
Identities = 26/123 (21%), Positives = 57/123 (46%), Gaps = 16/123 (13%)
Query: 3 KETHTPVKPKENMKQPILSTKKPTPRTKEKKEKKNSSQQKTNKNGKVEKKIIKVKKPLQR 62
KET + +E ++ K+ R +++KEK+ ++KT + K ++K + KK ++
Sbjct: 8 KETEETEETEETEEEEEKEGKRKEKRKEKRKEKE--KKKKTKETEKRKEKEEEEKKRKRK 65
Query: 63 NSRKKTQSPPSCSKKPRITMRPTIFVCHHKQNKTQHKNQKSKHKRQQKMKIRRASPEAAG 122
+KK + ++ ++ + + + +K + +R++K K RR E
Sbjct: 66 RKKKKEEEEREEEEE--------------EEEEEKEEEEKEEGRRRKKKKKRRRKEEEEE 111
Query: 123 KSK 125
K K
Sbjct: 112 KKK 114
Score = 28.5 bits (62), Expect = 2.6
Identities = 18/83 (21%), Positives = 38/83 (45%)
Query: 3 KETHTPVKPKENMKQPILSTKKPTPRTKEKKEKKNSSQQKTNKNGKVEKKIIKVKKPLQR 62
KE K KE K+ ++ + K KK+K+ +++ + + EK+ + ++ +R
Sbjct: 38 KEKEKKKKTKETEKRKEKEEEEKKRKRKRKKKKEEEEREEEEEEEEEEKEEEEKEEGRRR 97
Query: 63 NSRKKTQSPPSCSKKPRITMRPT 85
+KK + +K + R T
Sbjct: 98 KKKKKRRRKEEEEEKKKKRRRKT 120
>gi|117553580 adaptor-related protein complex 3, delta 1 subunit
isoform 2 [Homo sapiens]
Length = 1153
Score = 36.2 bits (82), Expect = 0.013
Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 3/75 (4%)
Query: 3 KETHTPVKPKENMKQPILSTKKPTPRTKEKKEKKNSSQQKTNKNGKVEKKIIKVKKPLQR 62
+ T T P++++ P++ K P+ KEKK K+ + K K K +KK K KK R
Sbjct: 822 RNTETSKSPEKDV--PMVEKKSKKPKKKEKKHKEKE-RDKEKKKEKEKKKSPKPKKKKHR 878
Query: 63 NSRKKTQSPPSCSKK 77
+++ SKK
Sbjct: 879 KEKEERTKGKKKSKK 893
>gi|239752449 PREDICTED: hypothetical protein [Homo sapiens]
Length = 170
Score = 36.2 bits (82), Expect = 0.013
Identities = 20/62 (32%), Positives = 31/62 (50%)
Query: 18 PILSTKKPTPRTKEKKEKKNSSQQKTNKNGKVEKKIIKVKKPLQRNSRKKTQSPPSCSKK 77
P KK + K+KK+KK ++K K K +KK K KK ++ RK+ + KK
Sbjct: 100 PQREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKK 159
Query: 78 PR 79
+
Sbjct: 160 KK 161
Score = 35.4 bits (80), Expect = 0.021
Identities = 18/57 (31%), Positives = 31/57 (54%)
Query: 12 KENMKQPILSTKKPTPRTKEKKEKKNSSQQKTNKNGKVEKKIIKVKKPLQRNSRKKT 68
KE K+ KK + K+KK+KK ++K K K ++K + +K ++ +KKT
Sbjct: 106 KEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKKKT 162
Score = 33.9 bits (76), Expect = 0.062
Identities = 20/77 (25%), Positives = 39/77 (50%), Gaps = 2/77 (2%)
Query: 6 HTPVK--PKENMKQPILSTKKPTPRTKEKKEKKNSSQQKTNKNGKVEKKIIKVKKPLQRN 63
H P+ P+ K+ KK + K+KK+KK ++K K K +K+ K K+ +R
Sbjct: 93 HLPLHGLPQREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRK 152
Query: 64 SRKKTQSPPSCSKKPRI 80
++K + + ++ +I
Sbjct: 153 KKRKKKKKKTGNEGAKI 169
Score = 32.7 bits (73), Expect = 0.14
Identities = 18/59 (30%), Positives = 30/59 (50%)
Query: 23 KKPTPRTKEKKEKKNSSQQKTNKNGKVEKKIIKVKKPLQRNSRKKTQSPPSCSKKPRIT 81
+K ++KK+KK ++K K K +KK K KK +R ++K + KK + T
Sbjct: 104 EKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKKKT 162
Score = 30.8 bits (68), Expect = 0.53
Identities = 17/56 (30%), Positives = 28/56 (50%)
Query: 3 KETHTPVKPKENMKQPILSTKKPTPRTKEKKEKKNSSQQKTNKNGKVEKKIIKVKK 58
KE K K+ K+ KK + K+KK+KK +++ K + +K+ K KK
Sbjct: 106 KEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKKK 161
Score = 30.4 bits (67), Expect = 0.69
Identities = 17/68 (25%), Positives = 33/68 (48%)
Query: 18 PILSTKKPTPRTKEKKEKKNSSQQKTNKNGKVEKKIIKVKKPLQRNSRKKTQSPPSCSKK 77
P+ + + +++KEKK ++K K K +KK K KK ++ ++K + KK
Sbjct: 95 PLHGLPQREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKK 154
Query: 78 PRITMRPT 85
+ + T
Sbjct: 155 RKKKKKKT 162
Score = 30.4 bits (67), Expect = 0.69
Identities = 23/95 (24%), Positives = 43/95 (45%), Gaps = 27/95 (28%)
Query: 27 PRTKEKKEKKNSSQQKTNKNGKVEKKIIKVKKPLQRNSRKKTQSPPSCSKKPRITMRPTI 86
P+ +EKKEK+ ++K K K +KK + +KK + KK +
Sbjct: 100 PQREEKKEKEKEKKKKKKKKKKKKKK---------KKKKKKKK------KKKK------- 137
Query: 87 FVCHHKQNKTQHKNQKSKHKRQQKMKIRRASPEAA 121
K+ + + + +K K K+++K K ++ E A
Sbjct: 138 -----KKKRKRKRKRKRKRKKKRKKKKKKTGNEGA 167
>gi|239749449 PREDICTED: hypothetical protein [Homo sapiens]
Length = 275
Score = 36.2 bits (82), Expect = 0.013
Identities = 27/106 (25%), Positives = 51/106 (48%), Gaps = 19/106 (17%)
Query: 10 KPKENMKQPILSTKKPTPRTKEKKEKKNSSQQKTNKNGKVEKKIIKVKKPLQRNSRKKTQ 69
K KE KQ ++ R K KKEKK +++ + G+ E+K K +K +R ++++ +
Sbjct: 78 KRKEREKQR--KERREKERRKRKKEKK---KRERKQRGRRERKKKKERKERERENKQRRE 132
Query: 70 SPPSCSKKPRITMRPTIFVCHHKQNKTQHKNQKSKHKRQQKMKIRR 115
+K K+ + + K +K + KR++K K R+
Sbjct: 133 RKRKKRRK--------------KKRRKERKREKERGKRERKRKKRK 164
Score = 35.8 bits (81), Expect = 0.016
Identities = 24/123 (19%), Positives = 53/123 (43%), Gaps = 12/123 (9%)
Query: 3 KETHTPVKPKENMKQPILSTKKPTPRTKEKKEKKNSSQQKTNKNGKVEKKIIKVKKPLQR 62
+E K + K+ K+ + +E+K K+ Q+K + K +K K KK +R
Sbjct: 48 REREKERKRERGKKEKKKRKKRERGKERERKRKEREKQRKERRE-KERRKRKKEKKKRER 106
Query: 63 NSRKKTQSPPSCSKKPRITMRPTIFVCHHKQNKTQHKNQKSKHKRQQKMKIRRASPEAAG 122
R + + +K R ++NK + + ++ K +++++ K R+ E
Sbjct: 107 KQRGRRERKKKKERKER-----------ERENKQRRERKRKKRRKKKRRKERKREKERGK 155
Query: 123 KSK 125
+ +
Sbjct: 156 RER 158
Score = 35.4 bits (80), Expect = 0.021
Identities = 20/92 (21%), Positives = 45/92 (48%), Gaps = 6/92 (6%)
Query: 24 KPTPRTKEKKEKKNSSQQKTNKNGKVEKKIIKVKKPLQRNSRKKTQSPPSCSKKPRITMR 83
KP + + +++K+ ++K + + E+K + KK ++ +++ +K R R
Sbjct: 27 KPCTQRESERKKERREREKRKREREKERKRERGKKEKKKRKKRERGKERERKRKEREKQR 86
Query: 84 PTIFVCHHKQNKTQHKNQKSKHKRQQKMKIRR 115
++ K + K +K K KR++K + RR
Sbjct: 87 ------KERREKERRKRKKEKKKRERKQRGRR 112
Score = 35.4 bits (80), Expect = 0.021
Identities = 23/103 (22%), Positives = 46/103 (44%)
Query: 30 KEKKEKKNSSQQKTNKNGKVEKKIIKVKKPLQRNSRKKTQSPPSCSKKPRITMRPTIFVC 89
K+KKE+K ++ + + KK K K+ +R K+ KK + R
Sbjct: 115 KKKKERKERERENKQRRERKRKKRRKKKRRKERKREKERGKRERKRKKRKKEEREKKRER 174
Query: 90 HHKQNKTQHKNQKSKHKRQQKMKIRRASPEAAGKSKPSQVTIS 132
+ K+ K + + ++ + +++++ K RR E K + T S
Sbjct: 175 NRKERKKERERKERRERKKERKKERRKKKERKKDRKTDRQTDS 217
Score = 32.7 bits (73), Expect = 0.14
Identities = 22/107 (20%), Positives = 46/107 (42%), Gaps = 17/107 (15%)
Query: 23 KKPTPRTKEKKEKKNSSQQKTNKNGKVEKKIIKVKKPLQRNSRKKTQSPPSCSKKPRITM 82
++ R K +K+K+ +++ + GK E+K K KK + R++ + KK R
Sbjct: 130 RRERKRKKRRKKKRRKERKREKERGKRERKRKKRKKEEREKKRERNRKE---RKKER--- 183
Query: 83 RPTIFVCHHKQNKTQHKNQKSKHKRQQKMKIRRASPEAAGKSKPSQV 129
+ + + +K + K++++ K R + SQV
Sbjct: 184 -----------ERKERRERKKERKKERRKKKERKKDRKTDRQTDSQV 219
Score = 32.3 bits (72), Expect = 0.18
Identities = 23/76 (30%), Positives = 36/76 (47%), Gaps = 5/76 (6%)
Query: 10 KPKENMKQPILSTKKPTPRTKEKKEKKNSSQQKTNKNGKVEKKIIKVKKPLQRNSRKKTQ 69
K ++ K+ +K R KE++EKK +K K + K+ + KK ++ RKK +
Sbjct: 145 KERKREKERGKRERKRKKRKKEEREKKRERNRKERKKERERKERRERKKERKKERRKKKE 204
Query: 70 SPPSCSKKPRITMRPT 85
KK R T R T
Sbjct: 205 -----RKKDRKTDRQT 215
Score = 29.3 bits (64), Expect = 1.5
Identities = 20/113 (17%), Positives = 52/113 (46%), Gaps = 5/113 (4%)
Query: 3 KETHTPVKPKENMKQPILSTKKPTPRTKEKKEKKNSSQQKTNKNGKVEKKIIKVKKPLQR 62
+E+ + +E K+ K+ +K++KK +++ + + K+ K +K +
Sbjct: 32 RESERKKERREREKRKREREKERKRERGKKEKKKRKKRERGKERERKRKEREKQRKERRE 91
Query: 63 NSRKKTQSPPSCSKKPRITMRPTIFVCHHKQNKTQHKNQKSKHKRQQKMKIRR 115
R+K + ++ + R K+ + + + +++K +R++K K RR
Sbjct: 92 KERRKRKKEKKKRERKQRGRRE-----RKKKKERKERERENKQRRERKRKKRR 139
Score = 28.5 bits (62), Expect = 2.6
Identities = 15/67 (22%), Positives = 32/67 (47%)
Query: 12 KENMKQPILSTKKPTPRTKEKKEKKNSSQQKTNKNGKVEKKIIKVKKPLQRNSRKKTQSP 71
+E ++ ++ R + +KE+K ++K + K E+K + KK ++ RK +
Sbjct: 156 RERKRKKRKKEEREKKRERNRKERKKERERKERRERKKERKKERRKKKERKKDRKTDRQT 215
Query: 72 PSCSKKP 78
S +P
Sbjct: 216 DSQVFRP 222
>gi|197927454 DEK oncogene isoform 2 [Homo sapiens]
Length = 341
Score = 36.2 bits (82), Expect = 0.013
Identities = 22/78 (28%), Positives = 41/78 (52%), Gaps = 4/78 (5%)
Query: 3 KETHTPVKPKENMKQPILSTKKPTPRTKEKKEKKNSSQQKTNKNGKVEKKIIKVKKPLQR 62
KE + + KE+ ++P K T + ++ K+K S +K+ K+ V+K K Q
Sbjct: 206 KEESSDDEDKESEEEP----PKKTAKREKPKQKATSKSKKSVKSANVKKADSSTTKKNQN 261
Query: 63 NSRKKTQSPPSCSKKPRI 80
+S+K+++S S +P I
Sbjct: 262 SSKKESESEDSSDDEPLI 279
Score = 32.3 bits (72), Expect = 0.18
Identities = 27/115 (23%), Positives = 49/115 (42%), Gaps = 8/115 (6%)
Query: 51 KKIIKVKKPLQRNSRKKTQSPPSCSKKPRITMRPTIFVCHHKQNKTQHKNQKSKHKRQQK 110
K + K KK + S+K+ S ++K + T P I ++ + KN++ + K
Sbjct: 157 KPLPKSKKTCSKGSKKERNSS-GMARKAKRTKCPEILSDESSSDEDEKKNKEESSDDEDK 215
Query: 111 MKIRRASPEAAGKSKPSQVTISAASKCRAWIRSVQL----ATATLGNHQSHKGQS 161
+ A + KP Q A SK + ++S + ++ T N S K +S
Sbjct: 216 ESEEEPPKKTAKREKPKQ---KATSKSKKSVKSANVKKADSSTTKKNQNSSKKES 267
Score = 30.8 bits (68), Expect = 0.53
Identities = 23/100 (23%), Positives = 40/100 (40%), Gaps = 13/100 (13%)
Query: 10 KPKENMKQPILSTKKPTPRTKEKKEKKNSSQQKTNKNGKVEKKIIKVKKPLQRNSRKKTQ 69
K K ILS + + ++K ++++S + + KK K +KP Q+ + K +
Sbjct: 182 KAKRTKCPEILSDESSSDEDEKKNKEESSDDEDKESEEEPPKKTAKREKPKQKATSKSKK 241
Query: 70 SPPSCSKKPRITMRPTIFVCHHKQNKTQHKNQKSKHKRQQ 109
S S + K + T KNQ S K +
Sbjct: 242 SVKSANVK-------------KADSSTTKKNQNSSKKESE 268
>gi|4503249 DEK oncogene isoform 1 [Homo sapiens]
Length = 375
Score = 36.2 bits (82), Expect = 0.013
Identities = 22/78 (28%), Positives = 41/78 (52%), Gaps = 4/78 (5%)
Query: 3 KETHTPVKPKENMKQPILSTKKPTPRTKEKKEKKNSSQQKTNKNGKVEKKIIKVKKPLQR 62
KE + + KE+ ++P K T + ++ K+K S +K+ K+ V+K K Q
Sbjct: 240 KEESSDDEDKESEEEP----PKKTAKREKPKQKATSKSKKSVKSANVKKADSSTTKKNQN 295
Query: 63 NSRKKTQSPPSCSKKPRI 80
+S+K+++S S +P I
Sbjct: 296 SSKKESESEDSSDDEPLI 313
Score = 32.3 bits (72), Expect = 0.18
Identities = 27/115 (23%), Positives = 49/115 (42%), Gaps = 8/115 (6%)
Query: 51 KKIIKVKKPLQRNSRKKTQSPPSCSKKPRITMRPTIFVCHHKQNKTQHKNQKSKHKRQQK 110
K + K KK + S+K+ S ++K + T P I ++ + KN++ + K
Sbjct: 191 KPLPKSKKTCSKGSKKERNSS-GMARKAKRTKCPEILSDESSSDEDEKKNKEESSDDEDK 249
Query: 111 MKIRRASPEAAGKSKPSQVTISAASKCRAWIRSVQL----ATATLGNHQSHKGQS 161
+ A + KP Q A SK + ++S + ++ T N S K +S
Sbjct: 250 ESEEEPPKKTAKREKPKQ---KATSKSKKSVKSANVKKADSSTTKKNQNSSKKES 301
Score = 30.8 bits (68), Expect = 0.53
Identities = 23/100 (23%), Positives = 40/100 (40%), Gaps = 13/100 (13%)
Query: 10 KPKENMKQPILSTKKPTPRTKEKKEKKNSSQQKTNKNGKVEKKIIKVKKPLQRNSRKKTQ 69
K K ILS + + ++K ++++S + + KK K +KP Q+ + K +
Sbjct: 216 KAKRTKCPEILSDESSSDEDEKKNKEESSDDEDKESEEEPPKKTAKREKPKQKATSKSKK 275
Query: 70 SPPSCSKKPRITMRPTIFVCHHKQNKTQHKNQKSKHKRQQ 109
S S + K + T KNQ S K +
Sbjct: 276 SVKSANVK-------------KADSSTTKKNQNSSKKESE 302
>gi|119372317 xin actin-binding repeat containing 2 isoform 1 [Homo
sapiens]
Length = 3549
Score = 36.2 bits (82), Expect = 0.013
Identities = 31/139 (22%), Positives = 60/139 (43%), Gaps = 21/139 (15%)
Query: 12 KENMKQPILSTKKPTPRTKEKKEKKNSSQ----QKTNKNGKVEKKIIKVKKPLQRNSRKK 67
K+ MK+ +L + + ++K E K S Q Q+T + +E+ + KP+ N + K
Sbjct: 2652 KDKMKKEVLQSSRDIMQSKSACEIKQSHQECSTQQTQQKKYLEQLHLPQSKPISPNFKVK 2711
Query: 68 TQSPPSCSKKPRITMRPTIFVCHHKQNKTQHKNQKSKHKRQQKMKIRRASPEAAGKSKPS 127
T P+ H N+T H + HK+Q ++ ++ + + K+K +
Sbjct: 2712 TIKLPTLD---------------HTLNETDHSYE--SHKQQSEIDVQTFTKKQYLKTKKT 2754
Query: 128 QVTISAASKCRAWIRSVQL 146
+ + + K R QL
Sbjct: 2755 EASTECSHKQSLAERHYQL 2773
>gi|221219020 NYD-SP11 protein [Homo sapiens]
Length = 2873
Score = 35.8 bits (81), Expect = 0.016
Identities = 22/100 (22%), Positives = 48/100 (48%), Gaps = 6/100 (6%)
Query: 30 KEKKEKKNSSQQKTNKNGKVEKKIIKVKKPLQRNSRKKT-----QSPPSCSKKPRITMRP 84
KE++EKK ++K + + ++++ + K+ + ++ + SCS + +
Sbjct: 2282 KEEEEKKKKKKEKKKEEVQEKEEVFEEKEEIMSEEETESLSDEEEEEESCSLEEEVDREK 2341
Query: 85 TIFVCHHKQNKTQHKNQKSKHKRQQKMKIRRASPEAAGKS 124
I + KQ K Q + +KS R++ + I R P G++
Sbjct: 2342 EI-LKKEKQFKLQEQRRKSLRGRERVLSILRGVPHGKGRA 2380
>gi|125656165 THO complex 2 [Homo sapiens]
Length = 1593
Score = 35.8 bits (81), Expect = 0.016
Identities = 27/130 (20%), Positives = 54/130 (41%), Gaps = 3/130 (2%)
Query: 12 KENMKQPILSTKKPTPRTKEKKEKKNSSQQKTNKNGKVEKKIIKVKKPLQRNSRKKTQSP 71
+ + K I T P ++KE++ K + ++ + EKK K +K +R+ +
Sbjct: 1433 ESSAKLYINHTPPPLSKSKEREMDKKDLDKSRERSREREKKDEKDRKERKRDHSNNDREV 1492
Query: 72 PSCSKKPRITMRPTIFVCHHKQN---KTQHKNQKSKHKRQQKMKIRRASPEAAGKSKPSQ 128
P K R T+ V HK ++ + N+K K K + K + ++ K +
Sbjct: 1493 PPDLTKRRKEENGTMGVSKHKSESPCESPYPNEKDKEKNKSKSSGKEKGSDSFKSEKMDK 1552
Query: 129 VTISAASKCR 138
++ + R
Sbjct: 1553 ISSGGKKESR 1562
Score = 27.7 bits (60), Expect = 4.5
Identities = 28/127 (22%), Positives = 54/127 (42%), Gaps = 11/127 (8%)
Query: 12 KENMKQPILSTKKPTPRTKEKKEKKNSSQQKTNKNGKVEKKIIKVKKPLQRNSRKKT--Q 69
KEN K+ K + KEKKEK ++ + GK K+ K ++P + ++T +
Sbjct: 1267 KENDKE------KGKEKEKEKKEKTPATTPEARVLGKDGKEKPKEERPNKDEKARETKER 1320
Query: 70 SPPSCSKKPRITMRPTIFVCHHKQNKTQHKNQKSKHKRQQKMKIRRASPEAAGKSKPSQV 129
+P S +K + ++ KT N +SK ++++ + + K S+
Sbjct: 1321 TPKSDKEKEKFKKEEK---AKDEKFKTTVPNAESKSTQEREREKEPSRERDIAKEMKSKE 1377
Query: 130 TISAASK 136
+ K
Sbjct: 1378 NVKGGEK 1384
Score = 26.9 bits (58), Expect = 7.6
Identities = 17/71 (23%), Positives = 32/71 (45%), Gaps = 3/71 (4%)
Query: 10 KPKE---NMKQPILSTKKPTPRTKEKKEKKNSSQQKTNKNGKVEKKIIKVKKPLQRNSRK 66
KPKE N + TK+ TP++ ++KEK ++ ++ K + K +R K
Sbjct: 1302 KPKEERPNKDEKARETKERTPKSDKEKEKFKKEEKAKDEKFKTTVPNAESKSTQEREREK 1361
Query: 67 KTQSPPSCSKK 77
+ +K+
Sbjct: 1362 EPSRERDIAKE 1372
>gi|156104889 myeloid/lymphoid or mixed-lineage leukemia (trithorax
homolog, Drosophila); translocated to, 3 [Homo sapiens]
Length = 568
Score = 35.8 bits (81), Expect = 0.016
Identities = 29/123 (23%), Positives = 54/123 (43%), Gaps = 10/123 (8%)
Query: 10 KPKEN--MKQ----PILSTKKPTPRTKEKKEKKNSSQQKTNKNGKVEKKIIKVKKPLQRN 63
KPKEN +K+ P ++ K+P P +KE K N + ++ K K + + +
Sbjct: 235 KPKENKPLKEEKIVPKMAFKEPKPMSKEPKPDSNLLTITSGQDKKAPSKRPPISDSEELS 294
Query: 64 SRKKTQSPPSCSKKPRITMRPTIFVCHHKQNKTQHKNQKSKHKRQQKMKIRRASPEAAGK 123
++K+ +S K + P I C + + + K+ H + K+KI + E
Sbjct: 295 AKKRKKSSSEALFKSFSSAPPLILTCSADKKQIKDKS----HVKMGKVKIESETSEKKKS 350
Query: 124 SKP 126
+ P
Sbjct: 351 TLP 353
Score = 31.2 bits (69), Expect = 0.40
Identities = 36/159 (22%), Positives = 61/159 (38%), Gaps = 10/159 (6%)
Query: 10 KPKENMKQPILSTKKPTPRTKEKKEKKNSSQQKTNKNGKVEKKIIKVKKPLQRNS---RK 66
KP + MK+ +KP+ ++E K + NK+ K K K KPL+ +
Sbjct: 195 KPHKLMKE---HKEKPSKDSREHKSAFKEPSRDHNKSSKESSKKPKENKPLKEEKIVPKM 251
Query: 67 KTQSPPSCSKKPRITMRPTIFVCHHKQNKTQHKNQKSKHKRQQKMKIRRASPEAAGKS-- 124
+ P SK+P+ + + S + K +++S EA KS
Sbjct: 252 AFKEPKPMSKEPKPDSNLLTITSGQDKKAPSKRPPISDSEELSAKKRKKSSSEALFKSFS 311
Query: 125 --KPSQVTISAASKCRAWIRSVQLATATLGNHQSHKGQS 161
P +T SA K V++ + + S K +S
Sbjct: 312 SAPPLILTCSADKKQIKDKSHVKMGKVKIESETSEKKKS 350
>gi|21040326 SON DNA-binding protein isoform F [Homo sapiens]
Length = 2426
Score = 35.8 bits (81), Expect = 0.016
Identities = 27/122 (22%), Positives = 53/122 (43%), Gaps = 4/122 (3%)
Query: 22 TKKPTPRTKEKKEKKNSSQQKTNKNGKVEKKIIKVKKPLQRNSRKKTQSPPSCSKKPRIT 81
+KK R K +KEKK S ++ + K+ + SR + +S S S + +
Sbjct: 1803 SKKNKNRDKGEKEKKRDSSLRSRSKRSKSSEHKSRKRTSESRSRARKRSSKSKSHRSQTR 1862
Query: 82 MRPTIFVCHHKQNKTQHKNQKSKHKRQQKMKIRRASPEAAGKSKPSQVTISAASKCRAWI 141
R ++ ++ KS+ +R + R+ SP+ KS+ + S++ R +
Sbjct: 1863 SRSR----SRRRRRSSRSRSKSRGRRSVSKEKRKRSPKHRSKSRERKRKRSSSRDNRKTV 1918
Query: 142 RS 143
R+
Sbjct: 1919 RA 1920
Score = 33.5 bits (75), Expect = 0.081
Identities = 30/123 (24%), Positives = 52/123 (42%), Gaps = 18/123 (14%)
Query: 4 ETHTPVKPKENMKQPILSTKKPTPRTKEKKEKKNSSQQKTNKNGKVEKKIIKVKKPLQRN 63
ET+TP++ + + P +K E+ S T ++ K L+
Sbjct: 36 ETNTPIEGNQAGDAAASARSLPNEEIVQKIEEVLSGVLDTE---------LRYKPDLKEG 86
Query: 64 SRKKTQSPPSCSKKPRITMRPTIFVCHHKQNK-TQHKNQKSKHKRQQKMKIRRASPEAAG 122
SRK S+ + PT + K K +HKN+K K K++++ K +R E+
Sbjct: 87 SRK--------SRCVSVQTDPTDEIPTKKSKKHKKHKNKKKKKKKEKEKKYKRQPEESES 138
Query: 123 KSK 125
K+K
Sbjct: 139 KTK 141
>gi|21040314 SON DNA-binding protein isoform B [Homo sapiens]
Length = 2303
Score = 35.8 bits (81), Expect = 0.016
Identities = 27/122 (22%), Positives = 53/122 (43%), Gaps = 4/122 (3%)
Query: 22 TKKPTPRTKEKKEKKNSSQQKTNKNGKVEKKIIKVKKPLQRNSRKKTQSPPSCSKKPRIT 81
+KK R K +KEKK S ++ + K+ + SR + +S S S + +
Sbjct: 1803 SKKNKNRDKGEKEKKRDSSLRSRSKRSKSSEHKSRKRTSESRSRARKRSSKSKSHRSQTR 1862
Query: 82 MRPTIFVCHHKQNKTQHKNQKSKHKRQQKMKIRRASPEAAGKSKPSQVTISAASKCRAWI 141
R ++ ++ KS+ +R + R+ SP+ KS+ + S++ R +
Sbjct: 1863 SRSR----SRRRRRSSRSRSKSRGRRSVSKEKRKRSPKHRSKSRERKRKRSSSRDNRKTV 1918
Query: 142 RS 143
R+
Sbjct: 1919 RA 1920
Score = 33.5 bits (75), Expect = 0.081
Identities = 30/123 (24%), Positives = 52/123 (42%), Gaps = 18/123 (14%)
Query: 4 ETHTPVKPKENMKQPILSTKKPTPRTKEKKEKKNSSQQKTNKNGKVEKKIIKVKKPLQRN 63
ET+TP++ + + P +K E+ S T ++ K L+
Sbjct: 36 ETNTPIEGNQAGDAAASARSLPNEEIVQKIEEVLSGVLDTE---------LRYKPDLKEG 86
Query: 64 SRKKTQSPPSCSKKPRITMRPTIFVCHHKQNK-TQHKNQKSKHKRQQKMKIRRASPEAAG 122
SRK S+ + PT + K K +HKN+K K K++++ K +R E+
Sbjct: 87 SRK--------SRCVSVQTDPTDEIPTKKSKKHKKHKNKKKKKKKEKEKKYKRQPEESES 138
Query: 123 KSK 125
K+K
Sbjct: 139 KTK 141
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.307 0.118 0.329
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,712,774
Number of Sequences: 37866
Number of extensions: 299467
Number of successful extensions: 3477
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 148
Number of HSP's successfully gapped in prelim test: 256
Number of HSP's that attempted gapping in prelim test: 2291
Number of HSP's gapped (non-prelim): 1045
length of query: 161
length of database: 18,247,518
effective HSP length: 94
effective length of query: 67
effective length of database: 14,688,114
effective search space: 984103638
effective search space used: 984103638
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 57 (26.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.