Guide to the Human Genome
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Search of human proteins with 113430126

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|113430126 PREDICTED: hypothetical protein [Homo sapiens]
         (161 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|113430608 PREDICTED: hypothetical protein [Homo sapiens]           329   7e-91
gi|113430126 PREDICTED: hypothetical protein [Homo sapiens]           329   7e-91
gi|169217249 PREDICTED: hypothetical protein [Homo sapiens]           298   1e-81
gi|169204585 PREDICTED: similar to mCG115122 [Homo sapiens]            87   8e-18
gi|169205186 PREDICTED: similar to mCG115122 [Homo sapiens]            87   8e-18
gi|169204245 PREDICTED: similar to mCG115122 [Homo sapiens]            87   8e-18
gi|145386517 phostensin [Homo sapiens]                                 35   0.021
gi|199559805 phostensin [Homo sapiens]                                 35   0.021
gi|195972805 myocyte enhancer factor 2A isoform 4 [Homo sapiens]       34   0.048
gi|195972801 myocyte enhancer factor 2A isoform 2 [Homo sapiens]       34   0.048
gi|195972799 myocyte enhancer factor 2A isoform 1 [Homo sapiens]       34   0.048
gi|5454106 TBP-related factor 10 [Homo sapiens]                        33   0.11 
gi|24308073 protein tyrosine phosphatase, non-receptor type 23 [...    33   0.14 
gi|115430223 galectin 3 [Homo sapiens]                                 32   0.31 
gi|5453936 POU class 3 homeobox 3 [Homo sapiens]                       32   0.31 
gi|55769533 PRKC, apoptosis, WT1, regulator [Homo sapiens]             31   0.40 
gi|169162518 PREDICTED: hypothetical protein [Homo sapiens]            30   0.90 
gi|169162027 PREDICTED: hypothetical protein [Homo sapiens]            30   0.90 
gi|169161198 PREDICTED: hypothetical protein [Homo sapiens]            30   0.90 
gi|25470890 DAZ associated protein 1 isoform a [Homo sapiens]          30   0.90 
gi|25470886 DAZ associated protein 1 isoform b [Homo sapiens]          30   0.90 
gi|239743055 PREDICTED: hypothetical protein XP_002342730 [Homo ...    30   1.2  
gi|5902084 silver homolog [Homo sapiens]                               30   1.2  
gi|14249622 ajuba isoform 1 [Homo sapiens]                             30   1.2  
gi|169210256 PREDICTED: hypothetical protein [Homo sapiens]            29   1.5  
gi|239755715 PREDICTED: similar to hCG2002101 [Homo sapiens]           29   1.5  
gi|239752750 PREDICTED: similar to protein phosphatase 2, cataly...    29   1.5  
gi|156416026 zinc finger protein 219 [Homo sapiens]                    29   1.5  
gi|156415998 zinc finger protein 219 [Homo sapiens]                    29   1.5  
gi|156415996 zinc finger protein 219 [Homo sapiens]                    29   1.5  

>gi|113430608 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 161

 Score =  329 bits (843), Expect = 7e-91
 Identities = 161/161 (100%), Positives = 161/161 (100%)

Query: 1   MGTYARHIIMFKSKGHADPVGRGGTWQGASDRWGQSPAGKGGLPPCSAARISSSPGGLPP 60
           MGTYARHIIMFKSKGHADPVGRGGTWQGASDRWGQSPAGKGGLPPCSAARISSSPGGLPP
Sbjct: 1   MGTYARHIIMFKSKGHADPVGRGGTWQGASDRWGQSPAGKGGLPPCSAARISSSPGGLPP 60

Query: 61  VLSRVHPSVPRSVSQRSLMEALGSGHYVGGSIRSMAAAALSGLAVRLSRPQGTRGSYGAF 120
           VLSRVHPSVPRSVSQRSLMEALGSGHYVGGSIRSMAAAALSGLAVRLSRPQGTRGSYGAF
Sbjct: 61  VLSRVHPSVPRSVSQRSLMEALGSGHYVGGSIRSMAAAALSGLAVRLSRPQGTRGSYGAF 120

Query: 121 CKTLTRTLLTFFDLAWRLRKNFFYFYILASVILNVHLQVYI 161
           CKTLTRTLLTFFDLAWRLRKNFFYFYILASVILNVHLQVYI
Sbjct: 121 CKTLTRTLLTFFDLAWRLRKNFFYFYILASVILNVHLQVYI 161


>gi|113430126 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 161

 Score =  329 bits (843), Expect = 7e-91
 Identities = 161/161 (100%), Positives = 161/161 (100%)

Query: 1   MGTYARHIIMFKSKGHADPVGRGGTWQGASDRWGQSPAGKGGLPPCSAARISSSPGGLPP 60
           MGTYARHIIMFKSKGHADPVGRGGTWQGASDRWGQSPAGKGGLPPCSAARISSSPGGLPP
Sbjct: 1   MGTYARHIIMFKSKGHADPVGRGGTWQGASDRWGQSPAGKGGLPPCSAARISSSPGGLPP 60

Query: 61  VLSRVHPSVPRSVSQRSLMEALGSGHYVGGSIRSMAAAALSGLAVRLSRPQGTRGSYGAF 120
           VLSRVHPSVPRSVSQRSLMEALGSGHYVGGSIRSMAAAALSGLAVRLSRPQGTRGSYGAF
Sbjct: 61  VLSRVHPSVPRSVSQRSLMEALGSGHYVGGSIRSMAAAALSGLAVRLSRPQGTRGSYGAF 120

Query: 121 CKTLTRTLLTFFDLAWRLRKNFFYFYILASVILNVHLQVYI 161
           CKTLTRTLLTFFDLAWRLRKNFFYFYILASVILNVHLQVYI
Sbjct: 121 CKTLTRTLLTFFDLAWRLRKNFFYFYILASVILNVHLQVYI 161


>gi|169217249 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 202

 Score =  298 bits (764), Expect = 1e-81
 Identities = 146/146 (100%), Positives = 146/146 (100%)

Query: 16  HADPVGRGGTWQGASDRWGQSPAGKGGLPPCSAARISSSPGGLPPVLSRVHPSVPRSVSQ 75
           HADPVGRGGTWQGASDRWGQSPAGKGGLPPCSAARISSSPGGLPPVLSRVHPSVPRSVSQ
Sbjct: 57  HADPVGRGGTWQGASDRWGQSPAGKGGLPPCSAARISSSPGGLPPVLSRVHPSVPRSVSQ 116

Query: 76  RSLMEALGSGHYVGGSIRSMAAAALSGLAVRLSRPQGTRGSYGAFCKTLTRTLLTFFDLA 135
           RSLMEALGSGHYVGGSIRSMAAAALSGLAVRLSRPQGTRGSYGAFCKTLTRTLLTFFDLA
Sbjct: 117 RSLMEALGSGHYVGGSIRSMAAAALSGLAVRLSRPQGTRGSYGAFCKTLTRTLLTFFDLA 176

Query: 136 WRLRKNFFYFYILASVILNVHLQVYI 161
           WRLRKNFFYFYILASVILNVHLQVYI
Sbjct: 177 WRLRKNFFYFYILASVILNVHLQVYI 202


>gi|169204585 PREDICTED: similar to mCG115122 [Homo sapiens]
          Length = 68

 Score = 86.7 bits (213), Expect = 8e-18
 Identities = 43/65 (66%), Positives = 49/65 (75%)

Query: 97  AAALSGLAVRLSRPQGTRGSYGAFCKTLTRTLLTFFDLAWRLRKNFFYFYILASVILNVH 156
           AAA S LAVR S P  T  SYG FCK L+RTLL FF+LAW+LR NF YFY+  SVILN+ 
Sbjct: 4   AAAPSSLAVRASSPAATPTSYGVFCKGLSRTLLAFFELAWQLRMNFPYFYVAGSVILNIR 63

Query: 157 LQVYI 161
           LQV+I
Sbjct: 64  LQVHI 68


>gi|169205186 PREDICTED: similar to mCG115122 [Homo sapiens]
          Length = 68

 Score = 86.7 bits (213), Expect = 8e-18
 Identities = 43/65 (66%), Positives = 49/65 (75%)

Query: 97  AAALSGLAVRLSRPQGTRGSYGAFCKTLTRTLLTFFDLAWRLRKNFFYFYILASVILNVH 156
           AAA S LAVR S P  T  SYG FCK L+RTLL FF+LAW+LR NF YFY+  SVILN+ 
Sbjct: 4   AAAPSSLAVRASSPAATPTSYGVFCKGLSRTLLAFFELAWQLRMNFPYFYVAGSVILNIR 63

Query: 157 LQVYI 161
           LQV+I
Sbjct: 64  LQVHI 68


>gi|169204245 PREDICTED: similar to mCG115122 [Homo sapiens]
          Length = 68

 Score = 86.7 bits (213), Expect = 8e-18
 Identities = 43/65 (66%), Positives = 49/65 (75%)

Query: 97  AAALSGLAVRLSRPQGTRGSYGAFCKTLTRTLLTFFDLAWRLRKNFFYFYILASVILNVH 156
           AAA S LAVR S P  T  SYG FCK L+RTLL FF+LAW+LR NF YFY+  SVILN+ 
Sbjct: 4   AAAPSSLAVRASSPAATPTSYGVFCKGLSRTLLAFFELAWQLRMNFPYFYVAGSVILNIR 63

Query: 157 LQVYI 161
           LQV+I
Sbjct: 64  LQVHI 68


>gi|145386517 phostensin [Homo sapiens]
          Length = 613

 Score = 35.4 bits (80), Expect = 0.021
 Identities = 22/63 (34%), Positives = 28/63 (44%)

Query: 24 GTWQGASDRWGQSPAGKGGLPPCSAARISSSPGGLPPVLSRVHPSVPRSVSQRSLMEALG 83
          G  +   +R  Q PA K GL     A++  SPG   PVL  V    P       L+EA+G
Sbjct: 24 GREKAERERLSQMPAWKRGLLERRRAKLGLSPGEPSPVLGTVEAGPPDPDESAVLLEAIG 83

Query: 84 SGH 86
            H
Sbjct: 84 PVH 86


>gi|199559805 phostensin [Homo sapiens]
          Length = 613

 Score = 35.4 bits (80), Expect = 0.021
 Identities = 22/63 (34%), Positives = 28/63 (44%)

Query: 24 GTWQGASDRWGQSPAGKGGLPPCSAARISSSPGGLPPVLSRVHPSVPRSVSQRSLMEALG 83
          G  +   +R  Q PA K GL     A++  SPG   PVL  V    P       L+EA+G
Sbjct: 24 GREKAERERLSQMPAWKRGLLERRRAKLGLSPGEPSPVLGTVEAGPPDPDESAVLLEAIG 83

Query: 84 SGH 86
            H
Sbjct: 84 PVH 86


>gi|195972805 myocyte enhancer factor 2A isoform 4 [Homo sapiens]
          Length = 429

 Score = 34.3 bits (77), Expect = 0.048
 Identities = 24/69 (34%), Positives = 35/69 (50%), Gaps = 6/69 (8%)

Query: 37  PAGKGGLPPCSAARISSSPGGLP---PVLSRVHPSVPRSVSQRSLMEALGSGHYVGGSIR 93
           P+ KG +PP +  RISSS    P   PV+S   PS+P    Q  +  A+ + +    S+ 
Sbjct: 209 PSSKGMMPPLNTQRISSSQATQPLATPVVSVTTPSLP---PQGLVYSAMPTAYNTDYSLT 265

Query: 94  SMAAAALSG 102
           S   +AL G
Sbjct: 266 SADLSALQG 274


>gi|195972801 myocyte enhancer factor 2A isoform 2 [Homo sapiens]
          Length = 497

 Score = 34.3 bits (77), Expect = 0.048
 Identities = 24/69 (34%), Positives = 35/69 (50%), Gaps = 6/69 (8%)

Query: 37  PAGKGGLPPCSAARISSSPGGLP---PVLSRVHPSVPRSVSQRSLMEALGSGHYVGGSIR 93
           P+ KG +PP +  RISSS    P   PV+S   PS+P    Q  +  A+ + +    S+ 
Sbjct: 277 PSSKGMMPPLNTQRISSSQATQPLATPVVSVTTPSLP---PQGLVYSAMPTAYNTDYSLT 333

Query: 94  SMAAAALSG 102
           S   +AL G
Sbjct: 334 SADLSALQG 342


>gi|195972799 myocyte enhancer factor 2A isoform 1 [Homo sapiens]
          Length = 499

 Score = 34.3 bits (77), Expect = 0.048
 Identities = 24/69 (34%), Positives = 35/69 (50%), Gaps = 6/69 (8%)

Query: 37  PAGKGGLPPCSAARISSSPGGLP---PVLSRVHPSVPRSVSQRSLMEALGSGHYVGGSIR 93
           P+ KG +PP +  RISSS    P   PV+S   PS+P    Q  +  A+ + +    S+ 
Sbjct: 279 PSSKGMMPPLNTQRISSSQATQPLATPVVSVTTPSLP---PQGLVYSAMPTAYNTDYSLT 335

Query: 94  SMAAAALSG 102
           S   +AL G
Sbjct: 336 SADLSALQG 344


>gi|5454106 TBP-related factor 10 [Homo sapiens]
          Length = 218

 Score = 33.1 bits (74), Expect = 0.11
 Identities = 24/81 (29%), Positives = 35/81 (43%), Gaps = 5/81 (6%)

Query: 36  SPAGKGGLPPCSAARISSSPGGLPPVLSRVHPSVPRSVSQRSLMEALGSGHYVGGSIRSM 95
           S +G G  P  + A  +S+PG  PPV +    ++P S +  +     G+    GG     
Sbjct: 2   SCSGSGADPEAAPASAASAPGPAPPVSAPA--ALPSSTAAENKASPAGT---AGGPGAGA 56

Query: 96  AAAALSGLAVRLSRPQGTRGS 116
           AA     LA R   P   RG+
Sbjct: 57  AAGGTGPLAARAGEPAERRGA 77


>gi|24308073 protein tyrosine phosphatase, non-receptor type 23 [Homo
            sapiens]
          Length = 1636

 Score = 32.7 bits (73), Expect = 0.14
 Identities = 18/49 (36%), Positives = 22/49 (44%)

Query: 37   PAGKGGLPPCSAARISSSPGGLPPVLSRVHPSVPRSVSQRSLMEALGSG 85
            PA   GLPP S    +  P   PP LS   P  P+   +  + EA  SG
Sbjct: 1523 PAEPPGLPPASLPESTPIPSSSPPPLSSPLPEAPQPKEEPPVPEAPSSG 1571


>gi|115430223 galectin 3 [Homo sapiens]
          Length = 250

 Score = 31.6 bits (70), Expect = 0.31
 Identities = 19/46 (41%), Positives = 23/46 (50%), Gaps = 9/46 (19%)

Query: 15 GHADPVGRGGTWQGASDRWGQSPAGKGGLPPCSAARISSSPGGLPP 60
          G+ +P G    W GA   WG  PAG GG P   A+   + PG  PP
Sbjct: 15 GNPNPQG----WPGA---WGNQPAGAGGYP--GASYPGAYPGQAPP 51


>gi|5453936 POU class 3 homeobox 3 [Homo sapiens]
          Length = 500

 Score = 31.6 bits (70), Expect = 0.31
 Identities = 31/104 (29%), Positives = 42/104 (40%), Gaps = 14/104 (13%)

Query: 16  HADPVGRGGTWQGASDRWGQSPAGKGG-LPPCSAARISSSPGGLPPVLSRVHPSVPRSVS 74
           H+D  G GG   G     G    G GG + P SAA  S +  G P  +  V     +S  
Sbjct: 23  HSDAAGAGGGGGGGGGGGGGGAGGGGGGMQPGSAAVTSGAYRGDPSSVKMV-----QSDF 77

Query: 75  QRSLMEALGSGHYVGGSIR--------SMAAAALSGLAVRLSRP 110
            +  M A   GH +  + +        + AAAA +  AV  S P
Sbjct: 78  MQGAMAASNGGHMLSHAHQWVTALPHAAAAAAAAAAAAVEASSP 121


>gi|55769533 PRKC, apoptosis, WT1, regulator [Homo sapiens]
          Length = 340

 Score = 31.2 bits (69), Expect = 0.40
 Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 7/61 (11%)

Query: 12 KSKGHADPVGRGGTWQGASDRWGQSPAGKGGLPPCSAAR--ISSSPGGLPPVLSRVHPSV 69
          K +   +P G      G+SD  G+ PAG  G P  +AA    ++ PGG P       P+V
Sbjct: 29 KMRAKQNPPGPAPPGGGSSDAAGKPPAGALGTPAAAAANELNNNLPGGAPAA-----PAV 83

Query: 70 P 70
          P
Sbjct: 84 P 84


>gi|169162518 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 216

 Score = 30.0 bits (66), Expect = 0.90
 Identities = 28/106 (26%), Positives = 43/106 (40%), Gaps = 7/106 (6%)

Query: 15  GHADPVGRGGTWQGASDRWGQSPAGKGGLPP----CSAARISSSPGGLPPVLS-RVHPSV 69
           G   P+       G    WG S  G G         + A++    GG  P  + R  P +
Sbjct: 83  GRPPPLREASRDFGGRHHWGGSKRGSGRRLERGVRVNRAQVRGEGGGRGPCQALRGRPQI 142

Query: 70  PRSVSQRSLMEALGSGHYVGGSIRSMAAAALSGLAVRLSRPQGTRG 115
           P +  Q ++ +A G G + GG ++   AAA +G      RP+   G
Sbjct: 143 PHAGVQ-NVCDAEG-GLFDGGGVQGEGAAAWAGRGAVSGRPEAEVG 186


>gi|169162027 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 216

 Score = 30.0 bits (66), Expect = 0.90
 Identities = 28/106 (26%), Positives = 43/106 (40%), Gaps = 7/106 (6%)

Query: 15  GHADPVGRGGTWQGASDRWGQSPAGKGGLPP----CSAARISSSPGGLPPVLS-RVHPSV 69
           G   P+       G    WG S  G G         + A++    GG  P  + R  P +
Sbjct: 83  GRPPPLREASRDFGGRHHWGGSKRGSGRRLERGVRVNRAQVRGEGGGRGPCQALRGRPQI 142

Query: 70  PRSVSQRSLMEALGSGHYVGGSIRSMAAAALSGLAVRLSRPQGTRG 115
           P +  Q ++ +A G G + GG ++   AAA +G      RP+   G
Sbjct: 143 PHAGVQ-NVCDAEG-GLFDGGGVQGEGAAAWAGRGAVSGRPEAEVG 186


>gi|169161198 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 216

 Score = 30.0 bits (66), Expect = 0.90
 Identities = 28/106 (26%), Positives = 43/106 (40%), Gaps = 7/106 (6%)

Query: 15  GHADPVGRGGTWQGASDRWGQSPAGKGGLPP----CSAARISSSPGGLPPVLS-RVHPSV 69
           G   P+       G    WG S  G G         + A++    GG  P  + R  P +
Sbjct: 83  GRPPPLREASRDFGGRHHWGGSKRGSGRRLERGVRVNRAQVRGEGGGRGPCQALRGRPQI 142

Query: 70  PRSVSQRSLMEALGSGHYVGGSIRSMAAAALSGLAVRLSRPQGTRG 115
           P +  Q ++ +A G G + GG ++   AAA +G      RP+   G
Sbjct: 143 PHAGVQ-NVCDAEG-GLFDGGGVQGEGAAAWAGRGAVSGRPEAEVG 186


>gi|25470890 DAZ associated protein 1 isoform a [Homo sapiens]
          Length = 378

 Score = 30.0 bits (66), Expect = 0.90
 Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 6/46 (13%)

Query: 21  GRGGTWQGASDR---WGQSPAGKGGLPP---CSAARISSSPGGLPP 60
           G  G W  A      +G  PAG+G  PP    ++  +S+ PGG PP
Sbjct: 231 GPQGMWVPAGQAIGGYGPPPAGRGAPPPPPPFTSYIVSTPPGGFPP 276


>gi|25470886 DAZ associated protein 1 isoform b [Homo sapiens]
          Length = 407

 Score = 30.0 bits (66), Expect = 0.90
 Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 6/46 (13%)

Query: 21  GRGGTWQGASDR---WGQSPAGKGGLPP---CSAARISSSPGGLPP 60
           G  G W  A      +G  PAG+G  PP    ++  +S+ PGG PP
Sbjct: 231 GPQGMWVPAGQAIGGYGPPPAGRGAPPPPPPFTSYIVSTPPGGFPP 276


>gi|239743055 PREDICTED: hypothetical protein XP_002342730 [Homo
           sapiens]
          Length = 235

 Score = 29.6 bits (65), Expect = 1.2
 Identities = 24/85 (28%), Positives = 35/85 (41%), Gaps = 11/85 (12%)

Query: 43  LPPCSAARISSSPGGLPPVL-SRVHPSVPRSVSQRSLMEALGSGHYVGGSIRSMAAAALS 101
           L P      SS P  L P L S+ HP   +++    L+      H+V  S +S A  A  
Sbjct: 43  LSPRQEGTCSSPPAPLRPELPSQSHPEYLKALGFPRLLPQRSHEHHVSSSSKSSACGAGP 102

Query: 102 GLAVRLSRPQGTRGSYGAFCKTLTR 126
           G+            + GA C+T T+
Sbjct: 103 GVG----------AAKGALCRTRTQ 117


>gi|5902084 silver homolog [Homo sapiens]
          Length = 661

 Score = 29.6 bits (65), Expect = 1.2
 Identities = 22/62 (35%), Positives = 29/62 (46%), Gaps = 3/62 (4%)

Query: 28  GASDRWGQSPAGKGGLPPCSAARISSSPGGLPPVLSRVHPSVPRSVSQRSLMEAL--GSG 85
           G  D +  + + +GGLP  +   ISS PG  PP      P +P    Q  L + L  GSG
Sbjct: 505 GEGDAFELTVSCQGGLPKEACMEISS-PGCQPPAQRLCQPVLPSPACQLVLHQILKGGSG 563

Query: 86  HY 87
            Y
Sbjct: 564 TY 565


>gi|14249622 ajuba isoform 1 [Homo sapiens]
          Length = 538

 Score = 29.6 bits (65), Expect = 1.2
 Identities = 22/74 (29%), Positives = 33/74 (44%), Gaps = 3/74 (4%)

Query: 44  PPCSAARISSSPGGLPPVLSRVHPSVPRSVSQRSL-MEALGSGHYVGGSIRSMAAAALSG 102
           PP + A    SPGG+P     +H ++ R  +QR        S H    ++ S    AL+G
Sbjct: 186 PPLAGAPAGYSPGGVPSAYPELHAALDRLYAQRPAGFGCQESRHSYPPALGS--PGALAG 243

Query: 103 LAVRLSRPQGTRGS 116
             V  + P   RG+
Sbjct: 244 AGVGAAGPLERRGA 257


>gi|169210256 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 447

 Score = 29.3 bits (64), Expect = 1.5
 Identities = 33/118 (27%), Positives = 43/118 (36%), Gaps = 23/118 (19%)

Query: 13  SKGHADPVGRGGTWQGASDRWGQSPAGKGGLP---PCSAARISSSPGGL---------PP 60
           +KG A+  G G   Q     W Q P G+   P   P  A R S+   G+          P
Sbjct: 241 AKGCAEFYGSGARAQPGGPCWAQGPPGRLPDPIPLPTRAPRTSAGLAGVGSGAPGEPAEP 300

Query: 61  VLSRVHPSVPRSVSQRSLMEALGSGHYVG-GSIRSMAAAALSGLAVRLSRPQGTRGSY 117
             +R   S P S   R     +GS    G G++     AA           QG RGS+
Sbjct: 301 GRARAPRSAPSSREPRQTKRRVGSRARAGAGAVTGPCPAA----------AQGARGSW 348


>gi|239755715 PREDICTED: similar to hCG2002101 [Homo sapiens]
          Length = 201

 Score = 29.3 bits (64), Expect = 1.5
 Identities = 23/90 (25%), Positives = 35/90 (38%), Gaps = 9/90 (10%)

Query: 21  GRGGTWQ--------GASDRWGQSPAGKGGLPPCSAARISSSPGGLPP-VLSRVHPSVPR 71
           GR G W         G    WG +P G G     S      S G  PP  +S  HP+   
Sbjct: 110 GRPGDWLPNSGQDLGGTQGDWGPAPQGFGSRSGTSPGNQHGSSGSHPPEAVSGSHPTPAG 169

Query: 72  SVSQRSLMEALGSGHYVGGSIRSMAAAALS 101
             S  S +  +G+   +  ++R+  ++  S
Sbjct: 170 QSSDGSELPEVGARQGLCSTLRAQWSSRCS 199


>gi|239752750 PREDICTED: similar to protein phosphatase 2,
          catalytic subunit, alpha [Homo sapiens]
          Length = 384

 Score = 29.3 bits (64), Expect = 1.5
 Identities = 26/78 (33%), Positives = 34/78 (43%), Gaps = 10/78 (12%)

Query: 14 KGHADPVGRGGTWQGASDRWGQ----SPAGKGGLPPCSAARISSSPGGLPPVLSRVHPSV 69
          +G +D   RGG   GA  R  Q    +PA +   PP S       P   PPV  R  P+ 
Sbjct: 12 RGRSDVRHRGG---GAIRRRAQLAPLTPARENRSPPGSLESAYLRPASDPPVSDRAGPAT 68

Query: 70 ---PRSVSQRSLMEALGS 84
             PR+ S++    A GS
Sbjct: 69 RAEPRTASEQPRPHAPGS 86


>gi|156416026 zinc finger protein 219 [Homo sapiens]
          Length = 722

 Score = 29.3 bits (64), Expect = 1.5
 Identities = 20/60 (33%), Positives = 27/60 (45%), Gaps = 3/60 (5%)

Query: 83  GSGHYV---GGSIRSMAAAALSGLAVRLSRPQGTRGSYGAFCKTLTRTLLTFFDLAWRLR 139
           G GH     G   RS A    +GL V  +RP+G RG+ G  C    ++  +   L   LR
Sbjct: 459 GPGHSASAAGAQARSTATQEENGLLVGGTRPEGGRGATGKDCPFCGKSFRSAHHLKVHLR 518


>gi|156415998 zinc finger protein 219 [Homo sapiens]
          Length = 722

 Score = 29.3 bits (64), Expect = 1.5
 Identities = 20/60 (33%), Positives = 27/60 (45%), Gaps = 3/60 (5%)

Query: 83  GSGHYV---GGSIRSMAAAALSGLAVRLSRPQGTRGSYGAFCKTLTRTLLTFFDLAWRLR 139
           G GH     G   RS A    +GL V  +RP+G RG+ G  C    ++  +   L   LR
Sbjct: 459 GPGHSASAAGAQARSTATQEENGLLVGGTRPEGGRGATGKDCPFCGKSFRSAHHLKVHLR 518


>gi|156415996 zinc finger protein 219 [Homo sapiens]
          Length = 722

 Score = 29.3 bits (64), Expect = 1.5
 Identities = 20/60 (33%), Positives = 27/60 (45%), Gaps = 3/60 (5%)

Query: 83  GSGHYV---GGSIRSMAAAALSGLAVRLSRPQGTRGSYGAFCKTLTRTLLTFFDLAWRLR 139
           G GH     G   RS A    +GL V  +RP+G RG+ G  C    ++  +   L   LR
Sbjct: 459 GPGHSASAAGAQARSTATQEENGLLVGGTRPEGGRGATGKDCPFCGKSFRSAHHLKVHLR 518


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.323    0.137    0.429 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,742,738
Number of Sequences: 37866
Number of extensions: 338949
Number of successful extensions: 1646
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 64
Number of HSP's that attempted gapping in prelim test: 1586
Number of HSP's gapped (non-prelim): 124
length of query: 161
length of database: 18,247,518
effective HSP length: 94
effective length of query: 67
effective length of database: 14,688,114
effective search space: 984103638
effective search space used: 984103638
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 57 (26.6 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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