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Search of human proteins with 21361543
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|21361543 PHD finger protein 7 isoform 1 [Homo sapiens]
(381 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|21361543 PHD finger protein 7 isoform 1 [Homo sapiens] 830 0.0
gi|27894287 PHD finger protein 7 isoform 2 [Homo sapiens] 725 0.0
gi|33620749 G2/M-phase specific E3 ubiquitin ligase [Homo sapiens] 261 7e-70
gi|63478060 PHD finger protein 6 isoform 2 [Homo sapiens] 65 1e-10
gi|28557677 PHD finger protein 6 isoform 1 [Homo sapiens] 64 2e-10
gi|62865858 PHD finger protein 6 isoform 1 [Homo sapiens] 64 2e-10
gi|94681069 PHD finger protein 11 isoform b [Homo sapiens] 58 2e-08
gi|94681065 PHD finger protein 11 isoform a [Homo sapiens] 58 2e-08
gi|7662046 myeloid/lymphoid or mixed-lineage leukemia 4 [Homo sa... 50 3e-06
gi|91718902 myeloid/lymphoid or mixed-lineage leukemia 3 [Homo s... 46 6e-05
gi|56550039 myeloid/lymphoid or mixed-lineage leukemia protein [... 44 2e-04
gi|51173722 bromodomain and PHD finger-containing protein 1 isof... 43 5e-04
gi|51173720 bromodomain and PHD finger-containing protein 1 isof... 43 5e-04
gi|148727368 bromodomain and PHD finger containing, 3 [Homo sapi... 42 7e-04
gi|11321642 bromodomain containing protein 1 [Homo sapiens] 42 0.001
gi|40807477 retinoic acid induced 1 [Homo sapiens] 41 0.002
gi|27477095 nuclear receptor binding SET domain protein 1 isofor... 40 0.003
gi|19923586 nuclear receptor binding SET domain protein 1 isofor... 40 0.003
gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo ... 40 0.005
gi|100816397 MYST histone acetyltransferase (monocytic leukemia)... 40 0.005
gi|19923609 PHD finger protein 17 short isoform [Homo sapiens] 39 0.006
gi|40556393 PHD finger protein 17 long isoform [Homo sapiens] 39 0.006
gi|150378543 MYST histone acetyltransferase (monocytic leukemia)... 39 0.010
gi|150378463 MYST histone acetyltransferase (monocytic leukemia)... 39 0.010
gi|150378493 MYST histone acetyltransferase (monocytic leukemia)... 39 0.010
gi|108773804 Fraser syndrome 1 [Homo sapiens] 37 0.023
gi|117190334 PHD finger protein 16 [Homo sapiens] 37 0.030
gi|7662006 PHD finger protein 16 [Homo sapiens] 37 0.030
gi|31652244 transcription factor 20 isoform 1 [Homo sapiens] 37 0.030
gi|41281612 zinc finger protein 828 [Homo sapiens] 36 0.050
>gi|21361543 PHD finger protein 7 isoform 1 [Homo sapiens]
Length = 381
Score = 830 bits (2143), Expect = 0.0
Identities = 381/381 (100%), Positives = 381/381 (100%)
Query: 1 MKTVKEKKECQRLRKSAKTRRVTQRKPSSGPVCWLCLREPGDPEKLGEFLQKDNISVHYF 60
MKTVKEKKECQRLRKSAKTRRVTQRKPSSGPVCWLCLREPGDPEKLGEFLQKDNISVHYF
Sbjct: 1 MKTVKEKKECQRLRKSAKTRRVTQRKPSSGPVCWLCLREPGDPEKLGEFLQKDNISVHYF 60
Query: 61 CLILSSKLPQRGQSNRGFHGFLPEDIKKEAARASRKICFVCKKKGAAINCQKDQCLRNFH 120
CLILSSKLPQRGQSNRGFHGFLPEDIKKEAARASRKICFVCKKKGAAINCQKDQCLRNFH
Sbjct: 61 CLILSSKLPQRGQSNRGFHGFLPEDIKKEAARASRKICFVCKKKGAAINCQKDQCLRNFH 120
Query: 121 LPCGQERGCLSQFFGEYKSFCDKHRPTQNIQHGHVGEESCILCCEDLSQQSVENIQSPCC 180
LPCGQERGCLSQFFGEYKSFCDKHRPTQNIQHGHVGEESCILCCEDLSQQSVENIQSPCC
Sbjct: 121 LPCGQERGCLSQFFGEYKSFCDKHRPTQNIQHGHVGEESCILCCEDLSQQSVENIQSPCC 180
Query: 181 SQAIYHRKCIQKYAHTSAKHFFKCPQCNNRKEFPQEMLRMGIHIPDRDAAWELEPGAFSD 240
SQAIYHRKCIQKYAHTSAKHFFKCPQCNNRKEFPQEMLRMGIHIPDRDAAWELEPGAFSD
Sbjct: 181 SQAIYHRKCIQKYAHTSAKHFFKCPQCNNRKEFPQEMLRMGIHIPDRDAAWELEPGAFSD 240
Query: 241 LYQRYQHCDAPICLYEQGRDSFEDEGRWCLILCATCGSHGTHRDCSSLRSNSKKWECEEC 300
LYQRYQHCDAPICLYEQGRDSFEDEGRWCLILCATCGSHGTHRDCSSLRSNSKKWECEEC
Sbjct: 241 LYQRYQHCDAPICLYEQGRDSFEDEGRWCLILCATCGSHGTHRDCSSLRSNSKKWECEEC 300
Query: 301 SPAAATDYIPENSGDIPCCSSTFHPEEHFCRDNTLEENPGLSWTDWPEPSLLEKPESSRG 360
SPAAATDYIPENSGDIPCCSSTFHPEEHFCRDNTLEENPGLSWTDWPEPSLLEKPESSRG
Sbjct: 301 SPAAATDYIPENSGDIPCCSSTFHPEEHFCRDNTLEENPGLSWTDWPEPSLLEKPESSRG 360
Query: 361 RRSYSWRSKGVRITNSCKKSK 381
RRSYSWRSKGVRITNSCKKSK
Sbjct: 361 RRSYSWRSKGVRITNSCKKSK 381
>gi|27894287 PHD finger protein 7 isoform 2 [Homo sapiens]
Length = 342
Score = 725 bits (1871), Expect = 0.0
Identities = 342/381 (89%), Positives = 342/381 (89%), Gaps = 39/381 (10%)
Query: 1 MKTVKEKKECQRLRKSAKTRRVTQRKPSSGPVCWLCLREPGDPEKLGEFLQKDNISVHYF 60
MKTVKEKKECQRLRKSAKTRRVTQRKPSSGPVCWLCLREPGDPEKLGEFLQKDNISVHYF
Sbjct: 1 MKTVKEKKECQRLRKSAKTRRVTQRKPSSGPVCWLCLREPGDPEKLGEFLQKDNISVHYF 60
Query: 61 CLILSSKLPQRGQSNRGFHGFLPEDIKKEAARASRKICFVCKKKGAAINCQKDQCLRNFH 120
CLILSSKLPQRGQSNRGFHGFLPEDIKKEAARASRKICFVCKKKGAAINCQKDQCLRNFH
Sbjct: 61 CLILSSKLPQRGQSNRGFHGFLPEDIKKEAARASRKICFVCKKKGAAINCQKDQCLRNFH 120
Query: 121 LPCGQERGCLSQFFGEYKSFCDKHRPTQNIQHGHVGEESCILCCEDLSQQSVENIQSPCC 180
LPCGQERGCLSQFFGEYKSFCDKHRPTQNIQHGHVGEESCILCCEDLSQQSVENIQSPCC
Sbjct: 121 LPCGQERGCLSQFFGEYKSFCDKHRPTQNIQHGHVGEESCILCCEDLSQQSVENIQSPCC 180
Query: 181 SQAIYHRKCIQKYAHTSAKHFFKCPQCNNRKEFPQEMLRMGIHIPDRDAAWELEPGAFSD 240
SQAIYHRKCIQKYAHTSAKHFFKCPQCNNRKEFPQEMLRMGIHIPDR
Sbjct: 181 SQAIYHRKCIQKYAHTSAKHFFKCPQCNNRKEFPQEMLRMGIHIPDR------------- 227
Query: 241 LYQRYQHCDAPICLYEQGRDSFEDEGRWCLILCATCGSHGTHRDCSSLRSNSKKWECEEC 300
RWCLILCATCGSHGTHRDCSSLRSNSKKWECEEC
Sbjct: 228 --------------------------RWCLILCATCGSHGTHRDCSSLRSNSKKWECEEC 261
Query: 301 SPAAATDYIPENSGDIPCCSSTFHPEEHFCRDNTLEENPGLSWTDWPEPSLLEKPESSRG 360
SPAAATDYIPENSGDIPCCSSTFHPEEHFCRDNTLEENPGLSWTDWPEPSLLEKPESSRG
Sbjct: 262 SPAAATDYIPENSGDIPCCSSTFHPEEHFCRDNTLEENPGLSWTDWPEPSLLEKPESSRG 321
Query: 361 RRSYSWRSKGVRITNSCKKSK 381
RRSYSWRSKGVRITNSCKKSK
Sbjct: 322 RRSYSWRSKGVRITNSCKKSK 342
>gi|33620749 G2/M-phase specific E3 ubiquitin ligase [Homo sapiens]
Length = 706
Score = 261 bits (667), Expect = 7e-70
Identities = 129/285 (45%), Positives = 171/285 (60%), Gaps = 6/285 (2%)
Query: 22 VTQRKP--SSGPVCWLCLREPGDPEKLGEFLQKD--NISVHYFCLILSSKLPQRGQSNRG 77
+ + KP S C C + P K GE K+ N++VHY+CL++SS + QRG+ G
Sbjct: 1 MNESKPGDSQNLACVFCRKHDDCPNKYGEKKTKEKWNLTVHYYCLLMSSGIWQRGKEEEG 60
Query: 78 FHGFLPEDIKKEAARASRKICFVCKKKGAAINCQKDQCLRNFHLPCGQERGCLSQFFGEY 137
+GFL EDI+KE RAS+ C VCKK GA+I C +C R++H PCG +R C+ QF G +
Sbjct: 61 VYGFLIEDIRKEVNRASKLKCCVCKKNGASIGCVAPRCKRSYHFPCGLQRECIFQFTGNF 120
Query: 138 KSFCDKHRPTQNIQHGHVGEE-SCILCCEDLSQQSVENI-QSPCCSQAIYHRKCIQKYAH 195
SFC HRP Q I + E C +C E + NI +SPCC A +HR C+Q A
Sbjct: 121 ASFCWDHRPVQIITSNNYRESLPCTICLEFIEPIPSYNILRSPCCKNAWFHRDCLQVQAI 180
Query: 196 TSAKHFFKCPQCNNRKEFPQEMLRMGIHIPDRDAAWELEPGAFSDLYQRYQHCDAPICLY 255
+ FF+C CNN F +EMLRMGIHIP++DA+WELE A+ +L Q Y+ CD C
Sbjct: 181 NAGVFFFRCTICNNSDIFQKEMLRMGIHIPEKDASWELEENAYQELLQHYERCDVRRCRC 240
Query: 256 EQGRDSFEDEGRWCLILCATCGSHGTHRDCSSLRSNSKKWECEEC 300
++GRD + +W + C CGS GTH CSSLRS + WEC EC
Sbjct: 241 KEGRDYNAPDSKWEIKRCQCCGSSGTHLACSSLRSWEQNWECLEC 285
>gi|63478060 PHD finger protein 6 isoform 2 [Homo sapiens]
Length = 312
Score = 64.7 bits (156), Expect = 1e-10
Identities = 45/146 (30%), Positives = 67/146 (45%), Gaps = 12/146 (8%)
Query: 22 VTQRK-PSSGPVCWLCLREPGDPEKLGEFLQKDN--ISVHYFCLILSSKLPQRGQSNRGF 78
V Q+K P+ C C + ++ G+ L +N ++ H+ C++ SS L N
Sbjct: 5 VEQKKGPTRQRKCGFC--KSNRDKECGQLLISENQKVAAHHKCMLFSSALVSSHSDNESL 62
Query: 79 HGFLPEDIKKEAARASRKICFVCKKKGAAINCQKDQCLRNFHLPC-----GQERGCLSQF 133
GF ED++KE R ++ +C +C GA I C C R +H C Q R SQ
Sbjct: 63 GGFSIEDVQKEIKRGTKLMCSLCHCPGATIGCDVKTCHRTYHYHCALHDKAQIREKPSQ- 121
Query: 134 FGEYKSFCDKHRPTQNIQHGHVGEES 159
G Y +C KH+ T + EES
Sbjct: 122 -GIYMVYCRKHKKTAHNSEAADLEES 146
>gi|28557677 PHD finger protein 6 isoform 1 [Homo sapiens]
Length = 365
Score = 63.9 bits (154), Expect = 2e-10
Identities = 42/134 (31%), Positives = 63/134 (47%), Gaps = 12/134 (8%)
Query: 22 VTQRK-PSSGPVCWLCLREPGDPEKLGEFLQKDN--ISVHYFCLILSSKLPQRGQSNRGF 78
V Q+K P+ C C + ++ G+ L +N ++ H+ C++ SS L N
Sbjct: 5 VEQKKGPTRQRKCGFC--KSNRDKECGQLLISENQKVAAHHKCMLFSSALVSSHSDNESL 62
Query: 79 HGFLPEDIKKEAARASRKICFVCKKKGAAINCQKDQCLRNFHLPC-----GQERGCLSQF 133
GF ED++KE R ++ +C +C GA I C C R +H C Q R SQ
Sbjct: 63 GGFSIEDVQKEIKRGTKLMCSLCHCPGATIGCDVKTCHRTYHYHCALHDKAQIREKPSQ- 121
Query: 134 FGEYKSFCDKHRPT 147
G Y +C KH+ T
Sbjct: 122 -GIYMVYCRKHKKT 134
Score = 51.6 bits (122), Expect = 1e-06
Identities = 36/136 (26%), Positives = 59/136 (43%), Gaps = 7/136 (5%)
Query: 16 SAKTRRVTQRKPS-SGPVCWLCLREPGDPEKLGEF--LQKDNISVHYFCLILSSKLPQRG 72
S + R + PS + P C C + E G+ + HY C++ SS Q
Sbjct: 194 SYRDRSPHRSSPSDTRPKCGFCHVGEEENEARGKLHIFNAKKAAAHYKCMLFSSGTVQLT 253
Query: 73 QSNRG-FHGFLPEDIKKEAARASRKICFVCKKKGAAINCQKDQCLRNFHLPCG---QERG 128
++R F F + + +E R R C +C + GA I C+ C++ +H CG + +
Sbjct: 254 TTSRAEFGDFDIKTVLQEIKRGKRMKCTLCSQPGATIGCEIKACVKTYHYHCGVQDKAKY 313
Query: 129 CLSQFFGEYKSFCDKH 144
+ G YK +C H
Sbjct: 314 IENMSRGIYKLYCKNH 329
>gi|62865858 PHD finger protein 6 isoform 1 [Homo sapiens]
Length = 365
Score = 63.9 bits (154), Expect = 2e-10
Identities = 42/134 (31%), Positives = 63/134 (47%), Gaps = 12/134 (8%)
Query: 22 VTQRK-PSSGPVCWLCLREPGDPEKLGEFLQKDN--ISVHYFCLILSSKLPQRGQSNRGF 78
V Q+K P+ C C + ++ G+ L +N ++ H+ C++ SS L N
Sbjct: 5 VEQKKGPTRQRKCGFC--KSNRDKECGQLLISENQKVAAHHKCMLFSSALVSSHSDNESL 62
Query: 79 HGFLPEDIKKEAARASRKICFVCKKKGAAINCQKDQCLRNFHLPC-----GQERGCLSQF 133
GF ED++KE R ++ +C +C GA I C C R +H C Q R SQ
Sbjct: 63 GGFSIEDVQKEIKRGTKLMCSLCHCPGATIGCDVKTCHRTYHYHCALHDKAQIREKPSQ- 121
Query: 134 FGEYKSFCDKHRPT 147
G Y +C KH+ T
Sbjct: 122 -GIYMVYCRKHKKT 134
Score = 51.6 bits (122), Expect = 1e-06
Identities = 36/136 (26%), Positives = 59/136 (43%), Gaps = 7/136 (5%)
Query: 16 SAKTRRVTQRKPS-SGPVCWLCLREPGDPEKLGEF--LQKDNISVHYFCLILSSKLPQRG 72
S + R + PS + P C C + E G+ + HY C++ SS Q
Sbjct: 194 SYRDRSPHRSSPSDTRPKCGFCHVGEEENEARGKLHIFNAKKAAAHYKCMLFSSGTVQLT 253
Query: 73 QSNRG-FHGFLPEDIKKEAARASRKICFVCKKKGAAINCQKDQCLRNFHLPCG---QERG 128
++R F F + + +E R R C +C + GA I C+ C++ +H CG + +
Sbjct: 254 TTSRAEFGDFDIKTVLQEIKRGKRMKCTLCSQPGATIGCEIKACVKTYHYHCGVQDKAKY 313
Query: 129 CLSQFFGEYKSFCDKH 144
+ G YK +C H
Sbjct: 314 IENMSRGIYKLYCKNH 329
>gi|94681069 PHD finger protein 11 isoform b [Homo sapiens]
Length = 292
Score = 57.8 bits (138), Expect = 2e-08
Identities = 38/118 (32%), Positives = 54/118 (45%), Gaps = 9/118 (7%)
Query: 33 CWLCLREPGDPE-KLGEFLQKDNISVHYFCLILSSKLPQRGQSN--RGFHGFLPEDIKKE 89
C LC P D E + F Q +NI+ H CL+ SS L + + F E +KKE
Sbjct: 6 CALC---PKDVEYNVLYFAQSENIAAHENCLLYSSGLVECEDQDPLNPDRSFDVESVKKE 62
Query: 90 AARASRKICFVCKKKGAAINCQKDQCLRNFHLPCGQERGCLSQ---FFGEYKSFCDKH 144
R + C C K+GA + C C +N+H C ++ + Q G YK C +H
Sbjct: 63 IQRGRKLKCKFCHKRGATVGCDLKNCNKNYHFFCAKKDDAVPQSDGVRGIYKLLCQQH 120
>gi|94681065 PHD finger protein 11 isoform a [Homo sapiens]
Length = 331
Score = 57.8 bits (138), Expect = 2e-08
Identities = 38/118 (32%), Positives = 54/118 (45%), Gaps = 9/118 (7%)
Query: 33 CWLCLREPGDPE-KLGEFLQKDNISVHYFCLILSSKLPQRGQSN--RGFHGFLPEDIKKE 89
C LC P D E + F Q +NI+ H CL+ SS L + + F E +KKE
Sbjct: 45 CALC---PKDVEYNVLYFAQSENIAAHENCLLYSSGLVECEDQDPLNPDRSFDVESVKKE 101
Query: 90 AARASRKICFVCKKKGAAINCQKDQCLRNFHLPCGQERGCLSQ---FFGEYKSFCDKH 144
R + C C K+GA + C C +N+H C ++ + Q G YK C +H
Sbjct: 102 IQRGRKLKCKFCHKRGATVGCDLKNCNKNYHFFCAKKDDAVPQSDGVRGIYKLLCQQH 159
>gi|7662046 myeloid/lymphoid or mixed-lineage leukemia 4 [Homo
sapiens]
Length = 2715
Score = 50.4 bits (119), Expect = 3e-06
Identities = 33/114 (28%), Positives = 50/114 (43%), Gaps = 11/114 (9%)
Query: 33 CWLCLRE-PGDPEKLGEFLQ-KDNISVHYFCLILSSKLPQRGQSNRGFHGFLPEDIKKEA 90
C LCL+ D ++ G L N H C I S+++ + + +++
Sbjct: 1581 CALCLKYGDADSKEAGRLLYIGQNEWTHVNCAIWSAEVFEENDGSL-------KNVHAAV 1633
Query: 91 ARASRKICFVCKKKGAAINCQKDQCLRNFHLPCGQERGCLSQFFGEYKSFCDKH 144
AR + C +C K GA + C CL NFH C + C+ F + K FC KH
Sbjct: 1634 ARGRQMRCELCLKPGATVGCCLSSCLSNFHFMCARASYCI--FQDDKKVFCQKH 1685
>gi|91718902 myeloid/lymphoid or mixed-lineage leukemia 3 [Homo
sapiens]
Length = 4911
Score = 45.8 bits (107), Expect = 6e-05
Identities = 29/123 (23%), Positives = 48/123 (39%), Gaps = 6/123 (4%)
Query: 85 DIKKEAARASRKICFVCKKKGAAINCQKDQCLRNFHLPCGQERGCLSQFFGEYKSFCDKH 144
++ K S + C CK GA I C +++C + +H PC G Q F C +H
Sbjct: 272 NVDKAVVSGSTERCAFCKHLGATIKCCEEKCTQMYHYPCAAGAGTF-QDFSHIFLLCPEH 330
Query: 145 RPTQNIQHGHVGEESCILCCEDLSQQSVENIQSPCCSQAIYHRKCIQKYAHTSAKHFFKC 204
+ +C +C D ++ C Q YH C+ + ++C
Sbjct: 331 --IDQAPERSKEDANCAVC--DSPGDLLDQFFCTTCGQH-YHGMCLDIAVTPLKRAGWQC 385
Query: 205 PQC 207
P+C
Sbjct: 386 PEC 388
Score = 37.4 bits (85), Expect = 0.023
Identities = 15/49 (30%), Positives = 22/49 (44%), Gaps = 2/49 (4%)
Query: 98 CFVCKKKGAAINCQKDQCLRNFHLPCGQERGCLSQFFGEYKSFCDKHRP 146
C C K GA C + +C +H C + C+ FF + C H+P
Sbjct: 4462 CVFCHKTGATSGCHRFRCTNIYHFTCAIKAQCM--FFKDKTMLCPMHKP 4508
>gi|56550039 myeloid/lymphoid or mixed-lineage leukemia protein [Homo
sapiens]
Length = 3969
Score = 43.9 bits (102), Expect = 2e-04
Identities = 17/62 (27%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
Query: 84 EDIKKEAARASRKICFVCKKKGAAINCQKDQCLRNFHLPCGQERGCLSQFFGEYKSFCDK 143
+++ R + C C+K GA + C C N+H C + + C+ F + K +C +
Sbjct: 1919 KNVHMAVIRGKQLRCEFCQKPGATVGCCLTSCTSNYHFMCSRAKNCV--FLDDKKVYCQR 1976
Query: 144 HR 145
HR
Sbjct: 1977 HR 1978
Score = 31.6 bits (70), Expect = 1.2
Identities = 17/65 (26%), Positives = 28/65 (43%), Gaps = 10/65 (15%)
Query: 153 GHVGEESCILCCEDLSQQSVENIQSP--------CCSQAIYHRKCIQKYAHTSAKHFFKC 204
GHV C +CCE + +E + P CC + + C ++ H + K +C
Sbjct: 1441 GHVEFVYCQVCCEPFHKFCLEENERPLEDQLENWCCRRCKFCHVCGRQ--HQATKQLLEC 1498
Query: 205 PQCNN 209
+C N
Sbjct: 1499 NKCRN 1503
>gi|51173722 bromodomain and PHD finger-containing protein 1 isoform
2 [Homo sapiens]
Length = 1214
Score = 42.7 bits (99), Expect = 5e-04
Identities = 39/139 (28%), Positives = 56/139 (40%), Gaps = 28/139 (20%)
Query: 25 RKPSSGPVCWLCLREPGDPEKLGEFLQKDNIS-VHYFCLILSSKLPQRGQSNRGFHGFLP 83
+ PS C LC P K G F Q D+ H C + +P+ +N F P
Sbjct: 322 QSPSRAVDCALC------PNKGGAFKQTDDGRWAHVVCALW---IPEVCFANTVF--LEP 370
Query: 84 EDIKKEAARASRKI-CFVCKKKG--AAINCQKDQCLRNFHLPCGQERGCL---------- 130
D + A K+ C++CK++G A I C K C FH+ C Q+ G
Sbjct: 371 IDSIEHIPPARWKLTCYICKQRGSGACIQCHKANCYTAFHVTCAQQAGLYMKMEPVRETG 430
Query: 131 ---SQFFGEYKSFCDKHRP 146
+ F ++CD H P
Sbjct: 431 ANGTSFSVRKTAYCDIHTP 449
>gi|51173720 bromodomain and PHD finger-containing protein 1 isoform
1 [Homo sapiens]
Length = 1220
Score = 42.7 bits (99), Expect = 5e-04
Identities = 39/139 (28%), Positives = 56/139 (40%), Gaps = 28/139 (20%)
Query: 25 RKPSSGPVCWLCLREPGDPEKLGEFLQKDNIS-VHYFCLILSSKLPQRGQSNRGFHGFLP 83
+ PS C LC P K G F Q D+ H C + +P+ +N F P
Sbjct: 322 QSPSRAVDCALC------PNKGGAFKQTDDGRWAHVVCALW---IPEVCFANTVF--LEP 370
Query: 84 EDIKKEAARASRKI-CFVCKKKG--AAINCQKDQCLRNFHLPCGQERGCL---------- 130
D + A K+ C++CK++G A I C K C FH+ C Q+ G
Sbjct: 371 IDSIEHIPPARWKLTCYICKQRGSGACIQCHKANCYTAFHVTCAQQAGLYMKMEPVRETG 430
Query: 131 ---SQFFGEYKSFCDKHRP 146
+ F ++CD H P
Sbjct: 431 ANGTSFSVRKTAYCDIHTP 449
>gi|148727368 bromodomain and PHD finger containing, 3 [Homo
sapiens]
Length = 1205
Score = 42.4 bits (98), Expect = 7e-04
Identities = 39/143 (27%), Positives = 54/143 (37%), Gaps = 27/143 (18%)
Query: 27 PSSGPVCWLCLREPGDP-------EKLGEFLQ-KDNISVHYFCLILSSKLPQRGQSNRGF 78
P +C CL+ P P K G F Q D H C I +P+ +N F
Sbjct: 250 PEGQWLCRCCLQSPSRPVDCILCPNKGGAFKQTSDGHWAHVVCAIW---IPEVCFANTVF 306
Query: 79 HGFLPEDIKKEAARASRKICFVCKKKG--AAINCQKDQCLRNFHLPCGQERGCLSQ---- 132
+ E I + C++CK+KG AAI C K C FH+ C Q G +
Sbjct: 307 LEPI-EGIDNIPPARWKLTCYICKQKGLGAAIQCHKVNCYTAFHVTCAQRAGLFMKIEPM 365
Query: 133 ---------FFGEYKSFCDKHRP 146
F ++C+ H P
Sbjct: 366 RETSLNGTIFTVRKTAYCEAHSP 388
>gi|11321642 bromodomain containing protein 1 [Homo sapiens]
Length = 1058
Score = 42.0 bits (97), Expect = 0.001
Identities = 40/140 (28%), Positives = 56/140 (40%), Gaps = 32/140 (22%)
Query: 34 WLCLR------EPGD----PEKLGEFLQKDNISV-HYFCLILSSKLPQRGQSNRGFHGFL 82
WLC P D P K G F + D+ H C + +P+ G +N F
Sbjct: 256 WLCRHCLQSRARPADCVLCPNKGGAFKKTDDDRWGHVVCALW---IPEVGFANTVF--IE 310
Query: 83 PEDIKKEAARASRKI-CFVCKKKG--AAINCQKDQCLRNFHLPCGQERGCL--------- 130
P D + A K+ C++CK+KG A I C K C FH+ C Q+ G
Sbjct: 311 PIDGVRNIPPARWKLTCYLCKQKGVGACIQCHKANCYTAFHVTCAQKAGLYMKMEPVKEL 370
Query: 131 ----SQFFGEYKSFCDKHRP 146
+ F ++CD H P
Sbjct: 371 TGGGTTFSVRKTAYCDVHTP 390
>gi|40807477 retinoic acid induced 1 [Homo sapiens]
Length = 1906
Score = 41.2 bits (95), Expect = 0.002
Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 3/50 (6%)
Query: 97 ICFVCKKKGAAINCQKDQCLRNFHLPCGQERGCLSQFFGEYKSF-CDKHR 145
+C C++ GA I C CL +H PC + GC+ F E S C KH+
Sbjct: 1856 MCSSCQEAGATIGCCHKGCLHTYHYPCASDAGCI--FIEENFSLKCPKHK 1903
>gi|27477095 nuclear receptor binding SET domain protein 1 isoform a
[Homo sapiens]
Length = 2427
Score = 40.4 bits (93), Expect = 0.003
Identities = 32/115 (27%), Positives = 51/115 (44%), Gaps = 19/115 (16%)
Query: 91 ARASRKICFVCKKKGAAINCQKDQCLRNFHLPCGQERGCLSQFFGEYKSFCDKHRPTQNI 150
A +C C+K G + C+ QC FHL C G G++ C++ R
Sbjct: 1270 AALKENVCQNCEKLGELLLCEA-QCCGAFHLEC---LGLTEMPRGKF--ICNECR----- 1318
Query: 151 QHGHVGEESCILCCEDLSQQSVENIQSPCCSQAIYHRKCIQKYAHTSAKH-FFKC 204
G +C +C + S + V+ P C + YH +C+QKY T ++ F+C
Sbjct: 1319 ----TGIHTCFVCKQ--SGEDVKRCLLPLCGK-FYHEECVQKYPPTVMQNKGFRC 1366
Score = 30.0 bits (66), Expect = 3.6
Identities = 15/59 (25%), Positives = 26/59 (44%), Gaps = 8/59 (13%)
Query: 65 SSKLPQRGQSNRGFHGFLPEDIKKEAARASRKICFVCKKKGAAINCQKDQCLRNFHLPC 123
S K ++ Q R G + ++ + E CF C G ++C+K C + +H C
Sbjct: 1827 SKKFKKKQQGKRRTQGEITKEREDE--------CFSCGDAGQLVSCKKPGCPKVYHADC 1877
>gi|19923586 nuclear receptor binding SET domain protein 1 isoform b
[Homo sapiens]
Length = 2696
Score = 40.4 bits (93), Expect = 0.003
Identities = 32/115 (27%), Positives = 51/115 (44%), Gaps = 19/115 (16%)
Query: 91 ARASRKICFVCKKKGAAINCQKDQCLRNFHLPCGQERGCLSQFFGEYKSFCDKHRPTQNI 150
A +C C+K G + C+ QC FHL C G G++ C++ R
Sbjct: 1539 AALKENVCQNCEKLGELLLCEA-QCCGAFHLEC---LGLTEMPRGKF--ICNECR----- 1587
Query: 151 QHGHVGEESCILCCEDLSQQSVENIQSPCCSQAIYHRKCIQKYAHTSAKH-FFKC 204
G +C +C + S + V+ P C + YH +C+QKY T ++ F+C
Sbjct: 1588 ----TGIHTCFVCKQ--SGEDVKRCLLPLCGK-FYHEECVQKYPPTVMQNKGFRC 1635
Score = 30.0 bits (66), Expect = 3.6
Identities = 15/59 (25%), Positives = 26/59 (44%), Gaps = 8/59 (13%)
Query: 65 SSKLPQRGQSNRGFHGFLPEDIKKEAARASRKICFVCKKKGAAINCQKDQCLRNFHLPC 123
S K ++ Q R G + ++ + E CF C G ++C+K C + +H C
Sbjct: 2096 SKKFKKKQQGKRRTQGEITKEREDE--------CFSCGDAGQLVSCKKPGCPKVYHADC 2146
>gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo
sapiens]
Length = 5537
Score = 39.7 bits (91), Expect = 0.005
Identities = 30/104 (28%), Positives = 40/104 (38%), Gaps = 10/104 (9%)
Query: 246 QHCDAPICLYEQGRDSFEDEGRWC-LILCATCGSHGTHRDCSSLRSNSKK---WECEECS 301
+H + L E E G C L C +CG H H C ++K W+C EC
Sbjct: 216 EHSEGAAYLEEARCAVCEGPGELCDLFFCTSCGHH-YHGACLDTALTARKRAGWQCPECK 274
Query: 302 PAAATDYIPENSGDIPC--CSSTFHPEEHFCRDNTLEENPGLSW 343
A +S + C C +H FC +EE P SW
Sbjct: 275 VCQACRKPGNDSKMLVCETCDKGYHT---FCLKPPMEELPAHSW 315
Score = 35.0 bits (79), Expect = 0.11
Identities = 24/110 (21%), Positives = 41/110 (37%), Gaps = 8/110 (7%)
Query: 98 CFVCKKKGAAINCQKDQCLRNFHLPCGQERGCLSQFFGEYKSFCDKHRPTQNIQHGHVGE 157
C C + GA+I C+ C R +H PC G + C +H ++ E
Sbjct: 172 CSHCTRLGASIPCRSPGCPRLYHFPCATASGSFLS-MKTLQLLCPEHSEGA----AYLEE 226
Query: 158 ESCILCCEDLSQQSVENIQSPCCSQAIYHRKCIQKYAHTSAKHFFKCPQC 207
C +C + + + C YH C+ + ++CP+C
Sbjct: 227 ARCAVC--EGPGELCDLFFCTSCGHH-YHGACLDTALTARKRAGWQCPEC 273
Score = 33.9 bits (76), Expect = 0.25
Identities = 13/48 (27%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
Query: 98 CFVCKKKGAAINCQKDQCLRNFHLPCGQERGCLSQFFGEYKSFCDKHR 145
C +C++ GA +C + +C +H C C+ FF + C H+
Sbjct: 5092 CSLCQRTGATSSCNRMRCPNVYHFACAIRAKCM--FFKDKTMLCPMHK 5137
>gi|100816397 MYST histone acetyltransferase (monocytic leukemia) 4
[Homo sapiens]
Length = 2073
Score = 39.7 bits (91), Expect = 0.005
Identities = 32/102 (31%), Positives = 46/102 (45%), Gaps = 12/102 (11%)
Query: 251 PICLYEQG-RDSFEDEGRWCLILCATCGSHGTH---RDCSSLRSNSK--KWECEECSPAA 304
PIC + G ++S ++ L+ CA CGS G + C L +N K +W+C EC +
Sbjct: 214 PICSFCLGTKESNREKKPEELLSCADCGSSGHPSCLKFCPELTTNVKALRWQCIECKTCS 273
Query: 305 ATDYIPENSGDIPCCSST---FHPEEHFCRDNTLEENPGLSW 343
A N+ ++ C S FH E C D L P W
Sbjct: 274 ACRVQGRNADNMLFCDSCDRGFHME---CCDPPLSRMPKGMW 312
>gi|19923609 PHD finger protein 17 short isoform [Homo sapiens]
Length = 509
Score = 39.3 bits (90), Expect = 0.006
Identities = 23/78 (29%), Positives = 36/78 (46%), Gaps = 11/78 (14%)
Query: 97 ICFVCKKK-GAAINCQKDQCLRNFHLPCGQERGC-LSQFFGE-----YKSFCDKH----R 145
+C +C +K GA+I C C FH+ C +RG + E +KS+C KH +
Sbjct: 314 VCSLCNEKFGASIQCSVKNCRTAFHVTCAFDRGLEMKTILAENDEVKFKSYCPKHSSHRK 373
Query: 146 PTQNIQHGHVGEESCILC 163
P +++ G E C
Sbjct: 374 PEESLGKGAAQENGAPEC 391
>gi|40556393 PHD finger protein 17 long isoform [Homo sapiens]
Length = 842
Score = 39.3 bits (90), Expect = 0.006
Identities = 23/78 (29%), Positives = 36/78 (46%), Gaps = 11/78 (14%)
Query: 97 ICFVCKKK-GAAINCQKDQCLRNFHLPCGQERGC-LSQFFGE-----YKSFCDKH----R 145
+C +C +K GA+I C C FH+ C +RG + E +KS+C KH +
Sbjct: 314 VCSLCNEKFGASIQCSVKNCRTAFHVTCAFDRGLEMKTILAENDEVKFKSYCPKHSSHRK 373
Query: 146 PTQNIQHGHVGEESCILC 163
P +++ G E C
Sbjct: 374 PEESLGKGAAQENGAPEC 391
>gi|150378543 MYST histone acetyltransferase (monocytic leukemia) 3
[Homo sapiens]
Length = 2004
Score = 38.5 bits (88), Expect = 0.010
Identities = 32/107 (29%), Positives = 47/107 (43%), Gaps = 22/107 (20%)
Query: 251 PICLY-----EQGRDSFEDEGRWCLILCATCGSHGTHRDCS------SLRSNSKKWECEE 299
PIC + EQ R+ +E LI CA CG+ G H C ++R + +W+C E
Sbjct: 207 PICSFCLGTKEQNREKKPEE----LISCADCGNSG-HPSCLKFSPELTVRVKALRWQCIE 261
Query: 300 CSPAAATDYIPENSGDIPCCSST---FHPEEHFCRDNTLEENPGLSW 343
C ++ +N+ ++ C S FH E C D L P W
Sbjct: 262 CKTCSSCRDQGKNADNMLFCDSCDRGFHME---CCDPPLTRMPKGMW 305
>gi|150378463 MYST histone acetyltransferase (monocytic leukemia) 3
[Homo sapiens]
Length = 2004
Score = 38.5 bits (88), Expect = 0.010
Identities = 32/107 (29%), Positives = 47/107 (43%), Gaps = 22/107 (20%)
Query: 251 PICLY-----EQGRDSFEDEGRWCLILCATCGSHGTHRDCS------SLRSNSKKWECEE 299
PIC + EQ R+ +E LI CA CG+ G H C ++R + +W+C E
Sbjct: 207 PICSFCLGTKEQNREKKPEE----LISCADCGNSG-HPSCLKFSPELTVRVKALRWQCIE 261
Query: 300 CSPAAATDYIPENSGDIPCCSST---FHPEEHFCRDNTLEENPGLSW 343
C ++ +N+ ++ C S FH E C D L P W
Sbjct: 262 CKTCSSCRDQGKNADNMLFCDSCDRGFHME---CCDPPLTRMPKGMW 305
>gi|150378493 MYST histone acetyltransferase (monocytic leukemia) 3
[Homo sapiens]
Length = 2004
Score = 38.5 bits (88), Expect = 0.010
Identities = 32/107 (29%), Positives = 47/107 (43%), Gaps = 22/107 (20%)
Query: 251 PICLY-----EQGRDSFEDEGRWCLILCATCGSHGTHRDCS------SLRSNSKKWECEE 299
PIC + EQ R+ +E LI CA CG+ G H C ++R + +W+C E
Sbjct: 207 PICSFCLGTKEQNREKKPEE----LISCADCGNSG-HPSCLKFSPELTVRVKALRWQCIE 261
Query: 300 CSPAAATDYIPENSGDIPCCSST---FHPEEHFCRDNTLEENPGLSW 343
C ++ +N+ ++ C S FH E C D L P W
Sbjct: 262 CKTCSSCRDQGKNADNMLFCDSCDRGFHME---CCDPPLTRMPKGMW 305
>gi|108773804 Fraser syndrome 1 [Homo sapiens]
Length = 4011
Score = 37.4 bits (85), Expect = 0.023
Identities = 68/304 (22%), Positives = 100/304 (32%), Gaps = 78/304 (25%)
Query: 93 ASRKICFVCKKKGAAINCQKDQCLRNFHLPCGQERGCLSQFFGEY---KSFCDKHRPTQN 149
A + CF C K NC C + L GQ CLSQ Y + C + PT
Sbjct: 713 ACHQSCFRCAGKSPH-NCT--DCGPSHVLLDGQ---CLSQCPDGYFHQEGSCTECHPTCR 766
Query: 150 IQHGHVGEESCILCCEDLSQQSVENIQSPCCSQAI-----YHRKCIQKYAHTSAKHFFK- 203
HG + E CI C +S + N ++ C + Y C H +A
Sbjct: 767 QCHGPL-ESDCISCYPHISLTN-GNCRTSCREEQFLNLVGYCADCHHLCQHCAADLHNTG 824
Query: 204 --CPQCNNRKEFPQEMLRMGIH-IPDRDAAWELEPGAFSDLYQRYQ-----------HCD 249
C +C N L +G H +PD + + E GA + + CD
Sbjct: 825 SICLRCQNA-----HYLLLGDHCVPDCPSGYYAERGACKKCHSSCRTCQGRGPFSCSSCD 879
Query: 250 APICLYEQGRDS-------FEDEGRWCLILCATCGSHGTHRDCSSLRSNSK--------- 293
+ L G S + D+ C CGS + C+S R +K
Sbjct: 880 TNLVLSHTGTCSTTCFPGHYLDDNHVCQPCNTHCGSCDSQASCTSCRDPNKVLLFGECQY 939
Query: 294 -------------------KWECEECSPAAATD-------YIPENSGDIPCCSSTFHPEE 327
W C CS TD Y+ ++ + C S+F+ +
Sbjct: 940 ESCAPQYYLDFSTNTCKECDWSCSACSGPLKTDCLQCMDGYVLQDGACVEQCLSSFYQDS 999
Query: 328 HFCR 331
C+
Sbjct: 1000 GLCK 1003
>gi|117190334 PHD finger protein 16 [Homo sapiens]
Length = 823
Score = 37.0 bits (84), Expect = 0.030
Identities = 23/62 (37%), Positives = 31/62 (50%), Gaps = 9/62 (14%)
Query: 97 ICFVCK-KKGAAINCQKDQCLRNFHLPCGQERGC-LSQFFGE-----YKSFCDKHRPTQN 149
+C +CK K GA I C C+ FH+ C E G + E +KS+C KH +QN
Sbjct: 311 VCNLCKLKTGACIQCSIKSCITAFHVTCAFEHGLEMKTILDEGDEVKFKSYCLKH--SQN 368
Query: 150 IQ 151
Q
Sbjct: 369 RQ 370
>gi|7662006 PHD finger protein 16 [Homo sapiens]
Length = 823
Score = 37.0 bits (84), Expect = 0.030
Identities = 23/62 (37%), Positives = 31/62 (50%), Gaps = 9/62 (14%)
Query: 97 ICFVCK-KKGAAINCQKDQCLRNFHLPCGQERGC-LSQFFGE-----YKSFCDKHRPTQN 149
+C +CK K GA I C C+ FH+ C E G + E +KS+C KH +QN
Sbjct: 311 VCNLCKLKTGACIQCSIKSCITAFHVTCAFEHGLEMKTILDEGDEVKFKSYCLKH--SQN 368
Query: 150 IQ 151
Q
Sbjct: 369 RQ 370
>gi|31652244 transcription factor 20 isoform 1 [Homo sapiens]
Length = 1960
Score = 37.0 bits (84), Expect = 0.030
Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Query: 88 KEAARASRKI-CFVCKKKGAAINCQKDQCLRNFHLPCGQERGCLSQFFGEYKSFCDKHRP 146
+EA +R++ C C++ GA + C C +H PC + CL + C KH+P
Sbjct: 1876 QEALEIAREMKCSHCQEAGATLGCYNKGCSFRYHYPCAIDADCLLH-EENFSVRCPKHKP 1934
>gi|41281612 zinc finger protein 828 [Homo sapiens]
Length = 812
Score = 36.2 bits (82), Expect = 0.050
Identities = 28/115 (24%), Positives = 47/115 (40%), Gaps = 14/115 (12%)
Query: 125 QERGCLSQFFGEYKSFCDKHRPTQNIQHGHVGEESC-ILCCEDLSQQSV-------ENIQ 176
Q R L QF E ++F + + ++ G G+ C I CC + + +V N+
Sbjct: 678 QSRNVL-QFTEEKEAFISEEEIAKYMKRGK-GKYYCKICCCRAMKKGAVLHHLVNKHNVH 735
Query: 177 SP----CCSQAIYHRKCIQKYAHTSAKHFFKCPQCNNRKEFPQEMLRMGIHIPDR 227
SP C +A ++ + + KCP+CN FP+ + H R
Sbjct: 736 SPYKCTICGKAFLLESLLKNHVAAHGQSLLKCPRCNFESNFPRGFKKHLTHCQSR 790
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.320 0.135 0.449
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,033,584
Number of Sequences: 37866
Number of extensions: 946074
Number of successful extensions: 3200
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 66
Number of HSP's that attempted gapping in prelim test: 3098
Number of HSP's gapped (non-prelim): 170
length of query: 381
length of database: 18,247,518
effective HSP length: 104
effective length of query: 277
effective length of database: 14,309,454
effective search space: 3963718758
effective search space used: 3963718758
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.