Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 21314654
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|21314654 ring finger protein 139 [Homo sapiens]
(664 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|21314654 ring finger protein 139 [Homo sapiens] 1338 0.0
gi|21389515 ring finger protein 145 [Homo sapiens] 233 6e-61
gi|27436927 synoviolin 1 isoform b [Homo sapiens] 73 7e-13
gi|27436925 synoviolin 1 isoform a [Homo sapiens] 73 7e-13
gi|33859668 Rabring 7 [Homo sapiens] 60 8e-09
gi|21071001 autocrine motility factor receptor [Homo sapiens] 57 5e-08
gi|34577087 ring finger protein 13 [Homo sapiens] 57 7e-08
gi|6005864 ring finger protein 13 [Homo sapiens] 57 7e-08
gi|38045931 ring finger protein 122 [Homo sapiens] 53 8e-07
gi|29788758 ring finger protein 130 [Homo sapiens] 53 1e-06
gi|5174653 ring finger protein 6 [Homo sapiens] 51 3e-06
gi|34305295 ring finger protein 6 [Homo sapiens] 51 3e-06
gi|34305293 ring finger protein 6 [Homo sapiens] 51 3e-06
gi|197245452 ring finger protein 24 isoform 2 [Homo sapiens] 50 5e-06
gi|197245450 ring finger protein 24 isoform 1 [Homo sapiens] 50 5e-06
gi|6857791 ring finger protein 24 isoform 1 [Homo sapiens] 50 5e-06
gi|7662244 DAZ interacting protein 3, zinc finger [Homo sapiens] 50 5e-06
gi|29789407 ring finger protein 149 [Homo sapiens] 50 7e-06
gi|7662486 ring finger protein 44 [Homo sapiens] 50 7e-06
gi|37577185 ring finger protein 38 isoform 2 [Homo sapiens] 50 9e-06
gi|37577181 ring finger protein 38 isoform 2 [Homo sapiens] 50 9e-06
gi|37577179 ring finger protein 38 isoform 3 [Homo sapiens] 50 9e-06
gi|37577177 ring finger protein 38 isoform 2 [Homo sapiens] 50 9e-06
gi|37577175 ring finger protein 38 isoform 1 [Homo sapiens] 50 9e-06
gi|58331204 ring finger protein 150 [Homo sapiens] 49 1e-05
gi|37588873 ring finger protein 128 isoform 1 [Homo sapiens] 49 2e-05
gi|37588871 ring finger protein 128 isoform 2 [Homo sapiens] 49 2e-05
gi|7706039 ring finger protein 181 [Homo sapiens] 49 2e-05
gi|150170725 zinc and ring finger 4 [Homo sapiens] 48 3e-05
gi|63025220 ring finger protein 215 [Homo sapiens] 48 3e-05
>gi|21314654 ring finger protein 139 [Homo sapiens]
Length = 664
Score = 1338 bits (3462), Expect = 0.0
Identities = 664/664 (100%), Positives = 664/664 (100%)
Query: 1 MAAVGPPQQQVRMAHQQVWAALEVALRVPCLYIIDAIFNSYPDSSQSRFCIVLQIFLRLF 60
MAAVGPPQQQVRMAHQQVWAALEVALRVPCLYIIDAIFNSYPDSSQSRFCIVLQIFLRLF
Sbjct: 1 MAAVGPPQQQVRMAHQQVWAALEVALRVPCLYIIDAIFNSYPDSSQSRFCIVLQIFLRLF 60
Query: 61 GVFASSIVLILSQRSLFKFYTYSSAFLLAATSVLVNYYASLHIDFYGAYNTSAFGIELLP 120
GVFASSIVLILSQRSLFKFYTYSSAFLLAATSVLVNYYASLHIDFYGAYNTSAFGIELLP
Sbjct: 61 GVFASSIVLILSQRSLFKFYTYSSAFLLAATSVLVNYYASLHIDFYGAYNTSAFGIELLP 120
Query: 121 RKGPSLWMALIVLQLTFGIGYVTLLQIHSIYSQLIILDLLVPVIGLITELPLHIRETLLF 180
RKGPSLWMALIVLQLTFGIGYVTLLQIHSIYSQLIILDLLVPVIGLITELPLHIRETLLF
Sbjct: 121 RKGPSLWMALIVLQLTFGIGYVTLLQIHSIYSQLIILDLLVPVIGLITELPLHIRETLLF 180
Query: 181 TSSLILTLNTVFVLAVKLKWFYYSTRYVYLLVRHMYRIYGLQLLMEDTWKRIRFPDILRV 240
TSSLILTLNTVFVLAVKLKWFYYSTRYVYLLVRHMYRIYGLQLLMEDTWKRIRFPDILRV
Sbjct: 181 TSSLILTLNTVFVLAVKLKWFYYSTRYVYLLVRHMYRIYGLQLLMEDTWKRIRFPDILRV 240
Query: 241 FWLTRVTAQATVLMYILRMANETDSFFISWDDFWDLICNLIISGCDSTLTVLGMSAVISS 300
FWLTRVTAQATVLMYILRMANETDSFFISWDDFWDLICNLIISGCDSTLTVLGMSAVISS
Sbjct: 241 FWLTRVTAQATVLMYILRMANETDSFFISWDDFWDLICNLIISGCDSTLTVLGMSAVISS 300
Query: 301 VAHYLGLGILAFIGSTEEDDRRLGFVAPVLFFILALQTGLSGLRPEERLIRLSRNMCLLL 360
VAHYLGLGILAFIGSTEEDDRRLGFVAPVLFFILALQTGLSGLRPEERLIRLSRNMCLLL
Sbjct: 301 VAHYLGLGILAFIGSTEEDDRRLGFVAPVLFFILALQTGLSGLRPEERLIRLSRNMCLLL 360
Query: 361 TAVLHFIHGMTDPVLMSLSASHVSSFRRHFPVLFVSACLFILPVLLSYVLWHHYALNTWL 420
TAVLHFIHGMTDPVLMSLSASHVSSFRRHFPVLFVSACLFILPVLLSYVLWHHYALNTWL
Sbjct: 361 TAVLHFIHGMTDPVLMSLSASHVSSFRRHFPVLFVSACLFILPVLLSYVLWHHYALNTWL 420
Query: 421 FAVTAFCVELCLKVIVSLTVYTLFMIDGYYNVLWEKLDDYVYYVRSTGSIIEFIFGVVMF 480
FAVTAFCVELCLKVIVSLTVYTLFMIDGYYNVLWEKLDDYVYYVRSTGSIIEFIFGVVMF
Sbjct: 421 FAVTAFCVELCLKVIVSLTVYTLFMIDGYYNVLWEKLDDYVYYVRSTGSIIEFIFGVVMF 480
Query: 481 GNGAYTMMFESGSKIRAFMMCLHAYFNIYLQAKNGWKTFMNRRTAVKKINSLPEIKGSRL 540
GNGAYTMMFESGSKIRAFMMCLHAYFNIYLQAKNGWKTFMNRRTAVKKINSLPEIKGSRL
Sbjct: 481 GNGAYTMMFESGSKIRAFMMCLHAYFNIYLQAKNGWKTFMNRRTAVKKINSLPEIKGSRL 540
Query: 541 QEINDVCAICYHEFTTSARITPCNHYFHALCLRKWLYIQDTCPMCHQKVYIEDDIKDNSN 600
QEINDVCAICYHEFTTSARITPCNHYFHALCLRKWLYIQDTCPMCHQKVYIEDDIKDNSN
Sbjct: 541 QEINDVCAICYHEFTTSARITPCNHYFHALCLRKWLYIQDTCPMCHQKVYIEDDIKDNSN 600
Query: 601 VSNNNGFIPPNETPEEAVREAAAESDRELNEDDSTDCDDDVQRERNGVIQHTGAAAEEFN 660
VSNNNGFIPPNETPEEAVREAAAESDRELNEDDSTDCDDDVQRERNGVIQHTGAAAEEFN
Sbjct: 601 VSNNNGFIPPNETPEEAVREAAAESDRELNEDDSTDCDDDVQRERNGVIQHTGAAAEEFN 660
Query: 661 DDTD 664
DDTD
Sbjct: 661 DDTD 664
>gi|21389515 ring finger protein 145 [Homo sapiens]
Length = 691
Score = 233 bits (593), Expect = 6e-61
Identities = 177/652 (27%), Positives = 307/652 (47%), Gaps = 63/652 (9%)
Query: 14 AHQQVWAALEVALRVPCLYIIDAI--------FNSYPDSSQSRFCIVLQIFLRL----FG 61
A +++ A L VALRVP + ++D + F SS S + +L L G
Sbjct: 31 AKEKLEAVLNVALRVPSIMLLDVLYRWDVSSFFQQIQRSSLSNNPLFQYKYLALNMHYVG 90
Query: 62 VFASSIVLILSQRSLFKFYTYS-SAFLLAATSVLVNYYASLHIDFYGAYNTSAFGIEL-L 119
S ++L L ++ L + Y Y +A LL A + Y ++F AY + L +
Sbjct: 91 YILSVVLLTLPRQHLVQLYLYFLTALLLYAGHQISRDYVRSELEF--AYEGPMYLEPLSM 148
Query: 120 PRKGPSLWMALIVLQLTFGIGYVTLLQIHSIYSQLIILDLLVPVIGLITELPLHIRETLL 179
R +L L+V L + + + S + ++P++ + +PL +
Sbjct: 149 NRFTTALIGQLVVCTLCSCVMKTKQIWLFSAH--------MLPLLARLCLVPLETIVIIN 200
Query: 180 FTSSLILTLNTVFVLAVKLKWFYYSTRYVYLLVRHMYRIYGLQLLMEDTWKRIRFPDILR 239
+ + L ++ L L Y + Y + + +YGL L W ++ P +
Sbjct: 201 KFAMIFTGLEVLYFLGSNLLVPYNLAKSAYRELVQVVEVYGLLALGMSLWNQLVVPVLFM 260
Query: 240 VFWLTRVTAQATVLMYILRMANETDSFFISWDDFWDLICNLIISGCDSTLTVLGMSAVIS 299
VFWL Q + Y T S + L I C + ++LG+ +S
Sbjct: 261 VFWLVLFALQ--IYSYF-----STRDQPASRERLLFLFLTSIAECCSTPYSLLGLVFTVS 313
Query: 300 SVAHYLGLGILA--------FIGSTEEDDRRLGFVAPVLFFILALQTGLSGLRPEERLIR 351
VA LG+L + + G V ILA+QTGL L+ R
Sbjct: 314 FVA----LGVLTLCKFYLQGYRAFMNDPAMNRGMTEGVTLLILAVQTGLIELQVVHRAFL 369
Query: 352 LSRNMCLLLTAVLHFIHGMTDPVLMSLSASHVSSFRRHFPVLFVSACLFIL--PVLLSYV 409
LS + +++ ++L + + DP++++L AS S +HF VS CLF+L P ++Y+
Sbjct: 370 LSIILFIVVASILQSMLEIADPIVLALGASRDKSLWKHFRA--VSLCLFLLVFPAYMAYM 427
Query: 410 LWHHYALNTWLFAVTAFCVELCLKVIVSLTVYTLFMIDGYYNVLWEKLDDYVYYVRSTGS 469
+ + ++ WL + + + L+V+ +L +Y LFM++ + E +DD +YYV T
Sbjct: 428 ICQFFHMDFWLLIIISSSILTSLQVLGTLFIYVLFMVEEFRKEPVENMDDVIYYVNGTYR 487
Query: 470 IIEFIFGVVMFGNGAYTMMFESGSKIRAFMMCLHAYFNIYLQAKNGWKTFMNRRTAVKKI 529
++EF+ + + G +F + + + ++ +H+Y+N++L+A+ GWK+F+ RR AV KI
Sbjct: 488 LLEFLVALCVVAYGVSETIFGEWTVMGSMIIFIHSYYNVWLRAQLGWKSFLLRRDAVNKI 547
Query: 530 NSLPEIKGSRLQEINDVCAICYHEFTTSARITPCNHYFHALCLRKWLYIQDTCPMCH--- 586
SLP +L++ ND+CAICY + SA ITPC+H+FHA CL+KWLY+Q+TCP+CH
Sbjct: 548 KSLPIATKEQLEKHNDICAICYQDM-KSAVITPCSHFFHAGCLKKWLYVQETCPLCHCHL 606
Query: 587 ----------QKVYIEDDIKDNSNVSNNNGFIPPNE--TPEEAVREAAAESD 626
+ ++ NV G PP + TP ++E + +++
Sbjct: 607 KNSSQLPGLGTEPVLQPHAGAEQNVMFQEGTEPPGQEHTPGTRIQEGSRDNN 658
>gi|27436927 synoviolin 1 isoform b [Homo sapiens]
Length = 617
Score = 73.2 bits (178), Expect = 7e-13
Identities = 56/203 (27%), Positives = 86/203 (42%), Gaps = 18/203 (8%)
Query: 395 VSACLFILPVLLSYVLWH--HYALNTWLFAVTAFCVELCLKVIVSLTV---YTLFMIDGY 449
+ + +F+L +L + H H L F E + + + LT+ Y L +D
Sbjct: 141 IVSLMFLLGILDFLFVSHAYHSILTRGASVQLVFGFEYAILMTMVLTIFIKYVLHSVDLQ 200
Query: 450 YNVLWEKLDDYVYYVRS-TGSIIEFIFGVVMFGNGAYTMMFESGSKIRAF-MMCLHAYFN 507
W+ Y+ Y TG I ++ M T+M K+ F + + +
Sbjct: 201 SENPWDNKAVYMLYTELFTGFIKVLLYMAFM------TIMI----KVHTFPLFAIRPMYL 250
Query: 508 IYLQAKNGWKTFMNRRTAVKKINSL-PEIKGSRLQEINDVCAICYHEFTTSARITPCNHY 566
Q K + R A++ +N+L P+ LQ +++VC IC E T A+ PCNH
Sbjct: 251 AMRQFKKAVTDAIMSRRAIRNMNTLYPDATPEELQAMDNVCIICREEMVTGAKRLPCNHI 310
Query: 567 FHALCLRKWLYIQDTCPMCHQKV 589
FH CLR W Q TCP C V
Sbjct: 311 FHTSCLRSWFQRQQTCPTCRMDV 333
>gi|27436925 synoviolin 1 isoform a [Homo sapiens]
Length = 616
Score = 73.2 bits (178), Expect = 7e-13
Identities = 56/203 (27%), Positives = 86/203 (42%), Gaps = 18/203 (8%)
Query: 395 VSACLFILPVLLSYVLWH--HYALNTWLFAVTAFCVELCLKVIVSLTV---YTLFMIDGY 449
+ + +F+L +L + H H L F E + + + LT+ Y L +D
Sbjct: 141 IVSLMFLLGILDFLFVSHAYHSILTRGASVQLVFGFEYAILMTMVLTIFIKYVLHSVDLQ 200
Query: 450 YNVLWEKLDDYVYYVRS-TGSIIEFIFGVVMFGNGAYTMMFESGSKIRAF-MMCLHAYFN 507
W+ Y+ Y TG I ++ M T+M K+ F + + +
Sbjct: 201 SENPWDNKAVYMLYTELFTGFIKVLLYMAFM------TIMI----KVHTFPLFAIRPMYL 250
Query: 508 IYLQAKNGWKTFMNRRTAVKKINSL-PEIKGSRLQEINDVCAICYHEFTTSARITPCNHY 566
Q K + R A++ +N+L P+ LQ +++VC IC E T A+ PCNH
Sbjct: 251 AMRQFKKAVTDAIMSRRAIRNMNTLYPDATPEELQAMDNVCIICREEMVTGAKRLPCNHI 310
Query: 567 FHALCLRKWLYIQDTCPMCHQKV 589
FH CLR W Q TCP C V
Sbjct: 311 FHTSCLRSWFQRQQTCPTCRMDV 333
>gi|33859668 Rabring 7 [Homo sapiens]
Length = 304
Score = 59.7 bits (143), Expect = 8e-09
Identities = 25/77 (32%), Positives = 45/77 (58%), Gaps = 3/77 (3%)
Query: 527 KKINSLPEIKGSRLQ-EINDVCAICYHEFTTSARIT--PCNHYFHALCLRKWLYIQDTCP 583
+KI SLP + ++ Q ++ C +C ++T + PCNH+FH+ C+ WL + DTCP
Sbjct: 207 EKITSLPTVTVTQEQVDMGLECPVCKEDYTVEEEVRQLPCNHFFHSSCIVPWLELHDTCP 266
Query: 584 MCHQKVYIEDDIKDNSN 600
+C + + ED + + +
Sbjct: 267 VCRKSLNGEDSTRQSQS 283
>gi|21071001 autocrine motility factor receptor [Homo sapiens]
Length = 643
Score = 57.0 bits (136), Expect = 5e-08
Identities = 58/205 (28%), Positives = 84/205 (40%), Gaps = 38/205 (18%)
Query: 441 YTLFMIDGYYNVLWEKLDDYVYYVRSTGSIIEFIF---------GVVMFGNGAYTMMFES 491
Y + + D + WE YVYY T ++E +++FGN ++ S
Sbjct: 237 YVIHLWDLNHEGTWEGKGTYVYY---TDFVMELTLLSLDLMHHIHMLLFGN-----IWLS 288
Query: 492 GSKIRAFMMCLHAYFNIYLQA---KNGWKTF--MNRRTAVKKINSLPEIKGSRLQEINDV 546
+ + FM + + + + KN + M R AV + PE L ND
Sbjct: 289 MASLVIFMQLRYLFHEVQRRIRRHKNYLRVVGNMEARFAV----ATPE----ELAVNNDD 340
Query: 547 CAICYHEFTTSARITPCNHYFHALCLRKWLYIQDTCPMCHQKVYIEDDIKDNSNVSNNNG 606
CAIC+ +AR PC H FH CLR WL +CP C + +I DN+ V +
Sbjct: 341 CAICWDSMQ-AARKLPCGHLFHNSCLRSWLEQDTSCPTCRMSL----NIADNNRVREEH- 394
Query: 607 FIPPNETPEEAVREAAAESDRELNE 631
E V AAAE LN+
Sbjct: 395 --QGENLDENLVPVAAAEGRPRLNQ 417
>gi|34577087 ring finger protein 13 [Homo sapiens]
Length = 381
Score = 56.6 bits (135), Expect = 7e-08
Identities = 40/132 (30%), Positives = 62/132 (46%), Gaps = 14/132 (10%)
Query: 522 RRTAVKK--INSLPEIKGSRLQEINDVCAICYHEFTTS--ARITPCNHYFHALCLRKWL- 576
RR ++K + LP K + E DVCAIC E+ RI PC+H +H C+ WL
Sbjct: 214 RRNRLRKDQLKKLPVHKFKKGDEY-DVCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLT 272
Query: 577 YIQDTCPMCHQKVYIE--------DDIKDNSNVSNNNGFIPPNETPEEAVREAAAESDRE 628
+ TCP+C QKV D ++ + V+ + + P + A +ES
Sbjct: 273 KTKKTCPVCKQKVVPSQGDSDSDTDSSQEENEVTEHTPLLRPLASVSAQSFGALSESRSH 332
Query: 629 LNEDDSTDCDDD 640
N +S+D ++D
Sbjct: 333 QNMTESSDYEED 344
>gi|6005864 ring finger protein 13 [Homo sapiens]
Length = 381
Score = 56.6 bits (135), Expect = 7e-08
Identities = 40/132 (30%), Positives = 62/132 (46%), Gaps = 14/132 (10%)
Query: 522 RRTAVKK--INSLPEIKGSRLQEINDVCAICYHEFTTS--ARITPCNHYFHALCLRKWL- 576
RR ++K + LP K + E DVCAIC E+ RI PC+H +H C+ WL
Sbjct: 214 RRNRLRKDQLKKLPVHKFKKGDEY-DVCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLT 272
Query: 577 YIQDTCPMCHQKVYIE--------DDIKDNSNVSNNNGFIPPNETPEEAVREAAAESDRE 628
+ TCP+C QKV D ++ + V+ + + P + A +ES
Sbjct: 273 KTKKTCPVCKQKVVPSQGDSDSDTDSSQEENEVTEHTPLLRPLASVSAQSFGALSESRSH 332
Query: 629 LNEDDSTDCDDD 640
N +S+D ++D
Sbjct: 333 QNMTESSDYEED 344
>gi|38045931 ring finger protein 122 [Homo sapiens]
Length = 155
Score = 53.1 bits (126), Expect = 8e-07
Identities = 32/127 (25%), Positives = 55/127 (43%), Gaps = 18/127 (14%)
Query: 477 VVMFGNGAYTMMFESGSKIRAFMMCLHAYFNIYLQAKNGWKTFMNRRTAVKKINSLPEIK 536
+V+FG G + M + + C + + QA++ R K++ + K
Sbjct: 39 MVIFGTGIFVFML-------SLIFCCYFISKLRNQAQS-------ERYGYKEVVLKGDAK 84
Query: 537 GSRLQEINDVCAICYHEFTTSAR--ITPCNHYFHALCLRKWLYIQDTCPMCHQKVYIEDD 594
+LQ CA+C +F + PC H FH CL KWL ++ CPMC++ + +
Sbjct: 85 --KLQLYGQTCAVCLEDFKGKDELGVLPCQHAFHRKCLVKWLEVRCVCPMCNKPIASPSE 142
Query: 595 IKDNSNV 601
N +
Sbjct: 143 ATQNIGI 149
>gi|29788758 ring finger protein 130 [Homo sapiens]
Length = 419
Score = 52.8 bits (125), Expect = 1e-06
Identities = 32/107 (29%), Positives = 48/107 (44%), Gaps = 3/107 (2%)
Query: 523 RTAVKKINSLPEIKGSRLQEIN-DVCAICYHEFTTS--ARITPCNHYFHALCLRKWLYIQ 579
+ A+ K+ + KG + + + D CA+C + + RI PC H FH C+ WL
Sbjct: 239 KKAISKLTTRTVKKGDKETDPDFDHCAVCIESYKQNDVVRILPCKHVFHKSCVDPWLSEH 298
Query: 580 DTCPMCHQKVYIEDDIKDNSNVSNNNGFIPPNETPEEAVREAAAESD 626
TCPMC + I N ++N F T +AV +A D
Sbjct: 299 CTCPMCKLNILKALGIVPNLPCTDNVAFDMERLTRTQAVNRRSALGD 345
>gi|5174653 ring finger protein 6 [Homo sapiens]
Length = 685
Score = 51.2 bits (121), Expect = 3e-06
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 9/65 (13%)
Query: 542 EINDVCAICYHEFTTSARIT--PCNHYFHALCLRKWLYIQDTCPMCHQKVYIEDDIKDNS 599
E+ +C++C ++ T ++ PC H FH C+ +WL TCP+C Q V S
Sbjct: 627 ELGKICSVCISDYVTGNKLRQLPCMHEFHIHCIDRWLSENCTCPICRQPVL-------GS 679
Query: 600 NVSNN 604
N++NN
Sbjct: 680 NIANN 684
>gi|34305295 ring finger protein 6 [Homo sapiens]
Length = 685
Score = 51.2 bits (121), Expect = 3e-06
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 9/65 (13%)
Query: 542 EINDVCAICYHEFTTSARIT--PCNHYFHALCLRKWLYIQDTCPMCHQKVYIEDDIKDNS 599
E+ +C++C ++ T ++ PC H FH C+ +WL TCP+C Q V S
Sbjct: 627 ELGKICSVCISDYVTGNKLRQLPCMHEFHIHCIDRWLSENCTCPICRQPVL-------GS 679
Query: 600 NVSNN 604
N++NN
Sbjct: 680 NIANN 684
>gi|34305293 ring finger protein 6 [Homo sapiens]
Length = 685
Score = 51.2 bits (121), Expect = 3e-06
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 9/65 (13%)
Query: 542 EINDVCAICYHEFTTSARIT--PCNHYFHALCLRKWLYIQDTCPMCHQKVYIEDDIKDNS 599
E+ +C++C ++ T ++ PC H FH C+ +WL TCP+C Q V S
Sbjct: 627 ELGKICSVCISDYVTGNKLRQLPCMHEFHIHCIDRWLSENCTCPICRQPVL-------GS 679
Query: 600 NVSNN 604
N++NN
Sbjct: 680 NIANN 684
>gi|197245452 ring finger protein 24 isoform 2 [Homo sapiens]
Length = 169
Score = 50.4 bits (119), Expect = 5e-06
Identities = 21/55 (38%), Positives = 33/55 (60%), Gaps = 4/55 (7%)
Query: 539 RLQEIN--DVCAICYHEFTTSAR--ITPCNHYFHALCLRKWLYIQDTCPMCHQKV 589
+++E+N ++CA+C +F I PC H FH CL KWL ++ CP+C+ V
Sbjct: 89 KVKELNLHELCAVCLEDFKPRDELGICPCKHAFHRKCLIKWLEVRKVCPLCNMPV 143
>gi|197245450 ring finger protein 24 isoform 1 [Homo sapiens]
Length = 148
Score = 50.4 bits (119), Expect = 5e-06
Identities = 21/55 (38%), Positives = 33/55 (60%), Gaps = 4/55 (7%)
Query: 539 RLQEIN--DVCAICYHEFTTSAR--ITPCNHYFHALCLRKWLYIQDTCPMCHQKV 589
+++E+N ++CA+C +F I PC H FH CL KWL ++ CP+C+ V
Sbjct: 68 KVKELNLHELCAVCLEDFKPRDELGICPCKHAFHRKCLIKWLEVRKVCPLCNMPV 122
>gi|6857791 ring finger protein 24 isoform 1 [Homo sapiens]
Length = 148
Score = 50.4 bits (119), Expect = 5e-06
Identities = 21/55 (38%), Positives = 33/55 (60%), Gaps = 4/55 (7%)
Query: 539 RLQEIN--DVCAICYHEFTTSAR--ITPCNHYFHALCLRKWLYIQDTCPMCHQKV 589
+++E+N ++CA+C +F I PC H FH CL KWL ++ CP+C+ V
Sbjct: 68 KVKELNLHELCAVCLEDFKPRDELGICPCKHAFHRKCLIKWLEVRKVCPLCNMPV 122
>gi|7662244 DAZ interacting protein 3, zinc finger [Homo sapiens]
Length = 1208
Score = 50.4 bits (119), Expect = 5e-06
Identities = 25/83 (30%), Positives = 41/83 (49%), Gaps = 5/83 (6%)
Query: 513 KNGWKTFMNRRTAVKKINSLPEIKGSRLQEINDVCAICYHEFTT-SARITPCNHYFHALC 571
K W+ ++ A + S P+ + +E + C IC+ + + + PC H FHA C
Sbjct: 1118 KPAWRPLTSQGPATWEGASNPDEE----EEEEEPCVICHENLSPENLSVLPCAHKFHAQC 1173
Query: 572 LRKWLYIQDTCPMCHQKVYIEDD 594
+R WL Q TCP C V + ++
Sbjct: 1174 IRPWLMQQGTCPTCRLHVLLPEE 1196
>gi|29789407 ring finger protein 149 [Homo sapiens]
Length = 400
Score = 50.1 bits (118), Expect = 7e-06
Identities = 30/93 (32%), Positives = 39/93 (41%), Gaps = 9/93 (9%)
Query: 547 CAICYHEFTTS--ARITPCNHYFHALCLRKWLYIQDTCPMCHQKVYIEDDIKDNSNVSNN 604
CA+C F RI PC H FH +C+ WL TCPMC + D+
Sbjct: 269 CAVCIENFKVKDIIRILPCKHIFHRICIDPWLLDHRTCPMC------KLDVIKALGYWGE 322
Query: 605 NGFIPPNETPEEAV-REAAAESDRELNEDDSTD 636
G + PE R+ AA L +DD +D
Sbjct: 323 PGDVQEMPAPESPPGRDPAANLSLALPDDDGSD 355
>gi|7662486 ring finger protein 44 [Homo sapiens]
Length = 432
Score = 50.1 bits (118), Expect = 7e-06
Identities = 19/47 (40%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Query: 541 QEINDVCAICYHEFTTSA--RITPCNHYFHALCLRKWLYIQDTCPMC 585
Q +C +C+ +F R+ PCNH FH C+ KWL TCP+C
Sbjct: 374 QSEQTLCVVCFSDFEARQLLRVLPCNHEFHTKCVDKWLKANRTCPIC 420
>gi|37577185 ring finger protein 38 isoform 2 [Homo sapiens]
Length = 432
Score = 49.7 bits (117), Expect = 9e-06
Identities = 20/47 (42%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Query: 541 QEINDVCAICYHEFTTSA--RITPCNHYFHALCLRKWLYIQDTCPMC 585
Q +C +C +F + R+ PCNH FHA C+ KWL TCP+C
Sbjct: 374 QSEQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPIC 420
>gi|37577181 ring finger protein 38 isoform 2 [Homo sapiens]
Length = 432
Score = 49.7 bits (117), Expect = 9e-06
Identities = 20/47 (42%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Query: 541 QEINDVCAICYHEFTTSA--RITPCNHYFHALCLRKWLYIQDTCPMC 585
Q +C +C +F + R+ PCNH FHA C+ KWL TCP+C
Sbjct: 374 QSEQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPIC 420
>gi|37577179 ring finger protein 38 isoform 3 [Homo sapiens]
Length = 465
Score = 49.7 bits (117), Expect = 9e-06
Identities = 20/47 (42%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Query: 541 QEINDVCAICYHEFTTSA--RITPCNHYFHALCLRKWLYIQDTCPMC 585
Q +C +C +F + R+ PCNH FHA C+ KWL TCP+C
Sbjct: 407 QSEQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPIC 453
>gi|37577177 ring finger protein 38 isoform 2 [Homo sapiens]
Length = 432
Score = 49.7 bits (117), Expect = 9e-06
Identities = 20/47 (42%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Query: 541 QEINDVCAICYHEFTTSA--RITPCNHYFHALCLRKWLYIQDTCPMC 585
Q +C +C +F + R+ PCNH FHA C+ KWL TCP+C
Sbjct: 374 QSEQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPIC 420
>gi|37577175 ring finger protein 38 isoform 1 [Homo sapiens]
Length = 515
Score = 49.7 bits (117), Expect = 9e-06
Identities = 20/47 (42%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Query: 541 QEINDVCAICYHEFTTSA--RITPCNHYFHALCLRKWLYIQDTCPMC 585
Q +C +C +F + R+ PCNH FHA C+ KWL TCP+C
Sbjct: 457 QSEQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPIC 503
>gi|58331204 ring finger protein 150 [Homo sapiens]
Length = 438
Score = 48.9 bits (115), Expect = 1e-05
Identities = 31/116 (26%), Positives = 47/116 (40%), Gaps = 3/116 (2%)
Query: 523 RTAVKKINSLPEIKGSRLQEIN-DVCAICYHEFTTS--ARITPCNHYFHALCLRKWLYIQ 579
+ A+ K+ KG + E + D CA+C + + RI PC H FH C+ WL
Sbjct: 253 KKAISKLQIRTIKKGDKETESDFDNCAVCIEGYKPNDVVRILPCRHLFHKSCVDPWLLDH 312
Query: 580 DTCPMCHQKVYIEDDIKDNSNVSNNNGFIPPNETPEEAVREAAAESDRELNEDDST 635
TCPMC + I N++ ++ + SD +NE T
Sbjct: 313 RTCPMCKMNILKALGIPPNADCMDDLPTDFEGSLGGPPTNQITGASDTTVNESSVT 368
>gi|37588873 ring finger protein 128 isoform 1 [Homo sapiens]
Length = 428
Score = 48.5 bits (114), Expect = 2e-05
Identities = 24/61 (39%), Positives = 32/61 (52%), Gaps = 6/61 (9%)
Query: 545 DVCAICYHEFTTS--ARITPCNHYFHALCLRKWLYIQDTCPMCH----QKVYIEDDIKDN 598
D CA+C + + RI CNH FH C+ WL TCPMC + + IE D++D
Sbjct: 275 DSCAVCIELYKPNDLVRILTCNHIFHKTCVDPWLLEHRTCPMCKCDILKALGIEVDVEDG 334
Query: 599 S 599
S
Sbjct: 335 S 335
>gi|37588871 ring finger protein 128 isoform 2 [Homo sapiens]
Length = 402
Score = 48.5 bits (114), Expect = 2e-05
Identities = 24/61 (39%), Positives = 32/61 (52%), Gaps = 6/61 (9%)
Query: 545 DVCAICYHEFTTS--ARITPCNHYFHALCLRKWLYIQDTCPMCH----QKVYIEDDIKDN 598
D CA+C + + RI CNH FH C+ WL TCPMC + + IE D++D
Sbjct: 249 DSCAVCIELYKPNDLVRILTCNHIFHKTCVDPWLLEHRTCPMCKCDILKALGIEVDVEDG 308
Query: 599 S 599
S
Sbjct: 309 S 309
>gi|7706039 ring finger protein 181 [Homo sapiens]
Length = 153
Score = 48.5 bits (114), Expect = 2e-05
Identities = 24/81 (29%), Positives = 43/81 (53%), Gaps = 3/81 (3%)
Query: 516 WKTFMNRRTAVKKINSLPE--IKGSRLQEINDVCAICYHEFTTSARITPCNHYFHALCLR 573
W + A + +LP I+GS+ + VC + + E T+ + PC+H FH+ C+
Sbjct: 46 WDHHLPPPAAKTVVENLPRTVIRGSQAELKCPVCLLEFEEEETAIEM-PCHHLFHSSCIL 104
Query: 574 KWLYIQDTCPMCHQKVYIEDD 594
WL ++CP+C ++ +DD
Sbjct: 105 PWLSKTNSCPLCRYELPTDDD 125
>gi|150170725 zinc and ring finger 4 [Homo sapiens]
Length = 429
Score = 48.1 bits (113), Expect = 3e-05
Identities = 29/100 (29%), Positives = 47/100 (47%), Gaps = 6/100 (6%)
Query: 544 NDVCAICYHEFTTS--ARITPCNHYFHALCLRKWL--YIQDTCPMCHQKVYIEDDIKDNS 599
ND+CAIC E+ +I PC+H +H C+ W + +CP+C Q V +D D++
Sbjct: 306 NDLCAICLDEYEEGDQLKILPCSHTYHCKCIDPWFSQAPRRSCPVCKQSVAATEDSFDST 365
Query: 600 NVS--NNNGFIPPNETPEEAVREAAAESDRELNEDDSTDC 637
S + + +P + P A++ EL S C
Sbjct: 366 TYSFRDEDPSLPGHRPPIWAIQVQLRSRRLELLGRASPHC 405
>gi|63025220 ring finger protein 215 [Homo sapiens]
Length = 377
Score = 47.8 bits (112), Expect = 3e-05
Identities = 18/43 (41%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
Query: 545 DVCAICYHEFTTSA--RITPCNHYFHALCLRKWLYIQDTCPMC 585
+ CA+C F R+ PC H FH C+ WL +Q TCP+C
Sbjct: 323 ETCAVCLDYFCNKQWLRVLPCKHEFHRDCVDPWLMLQQTCPLC 365
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.329 0.141 0.437
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,706,081
Number of Sequences: 37866
Number of extensions: 915208
Number of successful extensions: 4029
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 88
Number of HSP's successfully gapped in prelim test: 72
Number of HSP's that attempted gapping in prelim test: 3842
Number of HSP's gapped (non-prelim): 206
length of query: 664
length of database: 18,247,518
effective HSP length: 109
effective length of query: 555
effective length of database: 14,120,124
effective search space: 7836668820
effective search space used: 7836668820
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.