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Search of human proteins with 21237808
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|21237808 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin c2 isoform b [Homo sapiens]
(1130 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|21237808 SWI/SNF-related matrix-associated actin-dependent re... 2298 0.0
gi|194363725 SWI/SNF-related matrix-associated actin-dependent r... 2285 0.0
gi|21237805 SWI/SNF-related matrix-associated actin-dependent re... 2172 0.0
gi|188536047 SWI/SNF-related matrix-associated actin-dependent r... 1337 0.0
gi|33356148 formin-like 1 [Homo sapiens] 78 5e-14
gi|4826998 splicing factor proline/glutamine rich (polypyrimidin... 76 2e-13
gi|7706501 WW domain binding protein 11 [Homo sapiens] 76 2e-13
gi|57863314 vacuolar protein sorting 37C [Homo sapiens] 73 2e-12
gi|4507909 Wiskott-Aldrich syndrome protein [Homo sapiens] 70 9e-12
gi|160707881 formin 2 [Homo sapiens] 70 9e-12
gi|150170670 piccolo isoform 2 [Homo sapiens] 70 1e-11
gi|150378539 piccolo isoform 1 [Homo sapiens] 70 1e-11
gi|162329583 cleavage and polyadenylation specific factor 6, 68 ... 69 2e-11
gi|116256453 nuclear receptor co-repressor 2 isoform 1 [Homo sap... 69 2e-11
gi|148536848 carboxyl ester lipase precursor [Homo sapiens] 69 3e-11
gi|19718731 bromodomain-containing protein 4 isoform long [Homo ... 69 3e-11
gi|32895368 alpha 1 type VIII collagen precursor [Homo sapiens] 69 3e-11
gi|17738302 alpha 1 type VIII collagen precursor [Homo sapiens] 69 3e-11
gi|148227842 Myb-like, SWIRM and MPN domains 1 [Homo sapiens] 68 4e-11
gi|163965366 nascent polypeptide-associated complex alpha subuni... 68 4e-11
gi|119395760 diaphanous 1 isoform 2 [Homo sapiens] 67 1e-10
gi|119395758 diaphanous 1 isoform 1 [Homo sapiens] 67 1e-10
gi|23592228 extraembryonic, spermatogenesis, homeobox 1-like [Ho... 67 1e-10
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 66 2e-10
gi|146134388 YLP motif containing 1 [Homo sapiens] 66 2e-10
gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens] 66 2e-10
gi|4557317 annexin A11 [Homo sapiens] 65 4e-10
gi|22165433 annexin A11 [Homo sapiens] 65 4e-10
gi|22165431 annexin A11 [Homo sapiens] 65 4e-10
gi|116256445 nuclear receptor co-repressor 2 isoform 2 [Homo sap... 65 5e-10
>gi|21237808 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin c2 isoform b [Homo sapiens]
Length = 1130
Score = 2298 bits (5954), Expect = 0.0
Identities = 1130/1130 (100%), Positives = 1130/1130 (100%)
Query: 1 MAVRKKDGGPNVKYYEAADTVTQFDNVRLWLGKNYKKYIQAEPPTNKSLSSLVVQLLQFQ 60
MAVRKKDGGPNVKYYEAADTVTQFDNVRLWLGKNYKKYIQAEPPTNKSLSSLVVQLLQFQ
Sbjct: 1 MAVRKKDGGPNVKYYEAADTVTQFDNVRLWLGKNYKKYIQAEPPTNKSLSSLVVQLLQFQ 60
Query: 61 EEVFGKHVSNAPLTKLPIKCFLDFKAGGSLCHILAAAYKFKSDQGWRRYDFQNPSRMDRN 120
EEVFGKHVSNAPLTKLPIKCFLDFKAGGSLCHILAAAYKFKSDQGWRRYDFQNPSRMDRN
Sbjct: 61 EEVFGKHVSNAPLTKLPIKCFLDFKAGGSLCHILAAAYKFKSDQGWRRYDFQNPSRMDRN 120
Query: 121 VEMFMTIEKSLVQNNCLSRPNIFLCPEIEPKLLGKLKDIIKRHQGTVTEDKNNASHVVYP 180
VEMFMTIEKSLVQNNCLSRPNIFLCPEIEPKLLGKLKDIIKRHQGTVTEDKNNASHVVYP
Sbjct: 121 VEMFMTIEKSLVQNNCLSRPNIFLCPEIEPKLLGKLKDIIKRHQGTVTEDKNNASHVVYP 180
Query: 181 VPGNLEEEEWVRPVMKRDKQVLLHWGYYPDSYDTWIPASEIEASVEDAPTPEKPRKVHAK 240
VPGNLEEEEWVRPVMKRDKQVLLHWGYYPDSYDTWIPASEIEASVEDAPTPEKPRKVHAK
Sbjct: 181 VPGNLEEEEWVRPVMKRDKQVLLHWGYYPDSYDTWIPASEIEASVEDAPTPEKPRKVHAK 240
Query: 241 WILDTDTFNEWMNEEDYEVNDDKNPVSRRKKISAKTLTDEVNSPDSDRRDKKGGNYKKRK 300
WILDTDTFNEWMNEEDYEVNDDKNPVSRRKKISAKTLTDEVNSPDSDRRDKKGGNYKKRK
Sbjct: 241 WILDTDTFNEWMNEEDYEVNDDKNPVSRRKKISAKTLTDEVNSPDSDRRDKKGGNYKKRK 300
Query: 301 RSPSPSPTPEAKKKNAKKGPSTPYTKSKRGHREEEQEDLTKDMDEPSPVPNVEEVTLPKT 360
RSPSPSPTPEAKKKNAKKGPSTPYTKSKRGHREEEQEDLTKDMDEPSPVPNVEEVTLPKT
Sbjct: 301 RSPSPSPTPEAKKKNAKKGPSTPYTKSKRGHREEEQEDLTKDMDEPSPVPNVEEVTLPKT 360
Query: 361 VNTKKDSESAPVKGGTMTDLDEQEDESMETTGKDEDENSTGNKGEQTKNPDLHEDNVTEQ 420
VNTKKDSESAPVKGGTMTDLDEQEDESMETTGKDEDENSTGNKGEQTKNPDLHEDNVTEQ
Sbjct: 361 VNTKKDSESAPVKGGTMTDLDEQEDESMETTGKDEDENSTGNKGEQTKNPDLHEDNVTEQ 420
Query: 421 THHIIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEY 480
THHIIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEY
Sbjct: 421 THHIIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEY 480
Query: 481 LTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDAESRPTPMGPPPTSHFHVLADTPSG 540
LTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDAESRPTPMGPPPTSHFHVLADTPSG
Sbjct: 481 LTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDAESRPTPMGPPPTSHFHVLADTPSG 540
Query: 541 LVPLQPKTPQGRQVDADTKAGRKGKELDDLVPETAKGKPELQTSASQQMLNFPDKGKEKP 600
LVPLQPKTPQGRQVDADTKAGRKGKELDDLVPETAKGKPELQTSASQQMLNFPDKGKEKP
Sbjct: 541 LVPLQPKTPQGRQVDADTKAGRKGKELDDLVPETAKGKPELQTSASQQMLNFPDKGKEKP 600
Query: 601 TDMQNFGLRTDMYTKKNVPSKSKAAASATREWTEQETLLLLEALEMYKDDWNKVSEHVGS 660
TDMQNFGLRTDMYTKKNVPSKSKAAASATREWTEQETLLLLEALEMYKDDWNKVSEHVGS
Sbjct: 601 TDMQNFGLRTDMYTKKNVPSKSKAAASATREWTEQETLLLLEALEMYKDDWNKVSEHVGS 660
Query: 661 RTQDECILHFLRLPIEDPYLEDSEASLGPLAYQPIPFSQSGNPVMSTVAFLASVVDPRVA 720
RTQDECILHFLRLPIEDPYLEDSEASLGPLAYQPIPFSQSGNPVMSTVAFLASVVDPRVA
Sbjct: 661 RTQDECILHFLRLPIEDPYLEDSEASLGPLAYQPIPFSQSGNPVMSTVAFLASVVDPRVA 720
Query: 721 SAAAKSALEEFSKMKEEVPTALVEAHVRKVEEAAKVTGKADPAFGLESSGIAGTTSDEPE 780
SAAAKSALEEFSKMKEEVPTALVEAHVRKVEEAAKVTGKADPAFGLESSGIAGTTSDEPE
Sbjct: 721 SAAAKSALEEFSKMKEEVPTALVEAHVRKVEEAAKVTGKADPAFGLESSGIAGTTSDEPE 780
Query: 781 RIEESGNDEARVEGQATDEKKEPKEPREGGGAIEEEAKEKTSEAPKKDEEKGKEGDSEKE 840
RIEESGNDEARVEGQATDEKKEPKEPREGGGAIEEEAKEKTSEAPKKDEEKGKEGDSEKE
Sbjct: 781 RIEESGNDEARVEGQATDEKKEPKEPREGGGAIEEEAKEKTSEAPKKDEEKGKEGDSEKE 840
Query: 841 SEKSDGDPIVDPEKEKEPKEGQEEVLKEVVESEGERKTKVERDIGEGNLSTAAAAALAAA 900
SEKSDGDPIVDPEKEKEPKEGQEEVLKEVVESEGERKTKVERDIGEGNLSTAAAAALAAA
Sbjct: 841 SEKSDGDPIVDPEKEKEPKEGQEEVLKEVVESEGERKTKVERDIGEGNLSTAAAAALAAA 900
Query: 901 AVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREREALEYQRQQLLA 960
AVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREREALEYQRQQLLA
Sbjct: 901 AVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREREALEYQRQQLLA 960
Query: 961 DRQAFHMEQLKYAEMRARQQHFQQMHQQQQQPPPALPPGSQPIPPTGAAGPPAVHGLAVA 1020
DRQAFHMEQLKYAEMRARQQHFQQMHQQQQQPPPALPPGSQPIPPTGAAGPPAVHGLAVA
Sbjct: 961 DRQAFHMEQLKYAEMRARQQHFQQMHQQQQQPPPALPPGSQPIPPTGAAGPPAVHGLAVA 1020
Query: 1021 PASVVPAPAGSGAPPGSLGPSEQIGQAGSTAGPQQQQPAGAPQPGAVPPGVPPPGPHGPS 1080
PASVVPAPAGSGAPPGSLGPSEQIGQAGSTAGPQQQQPAGAPQPGAVPPGVPPPGPHGPS
Sbjct: 1021 PASVVPAPAGSGAPPGSLGPSEQIGQAGSTAGPQQQQPAGAPQPGAVPPGVPPPGPHGPS 1080
Query: 1081 PFPNQQTPPSMMPGAVPGSGHPGVADPGTPLPPDPTAPSPGTVTPVPPPQ 1130
PFPNQQTPPSMMPGAVPGSGHPGVADPGTPLPPDPTAPSPGTVTPVPPPQ
Sbjct: 1081 PFPNQQTPPSMMPGAVPGSGHPGVADPGTPLPPDPTAPSPGTVTPVPPPQ 1130
>gi|194363725 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin c2 isoform c [Homo sapiens]
Length = 1152
Score = 2285 bits (5921), Expect = 0.0
Identities = 1130/1152 (98%), Positives = 1130/1152 (98%), Gaps = 22/1152 (1%)
Query: 1 MAVRKKDGGPNVKYYEAADTVTQFDNVRLWLGKNYKKYIQAEPPTNKSLSSLVVQLLQFQ 60
MAVRKKDGGPNVKYYEAADTVTQFDNVRLWLGKNYKKYIQAEPPTNKSLSSLVVQLLQFQ
Sbjct: 1 MAVRKKDGGPNVKYYEAADTVTQFDNVRLWLGKNYKKYIQAEPPTNKSLSSLVVQLLQFQ 60
Query: 61 EEVFGKHVSNAPLTKLPIKCFLDFKAGGSLCHILAAAYKFKSDQGWRRYDFQNPSRMDRN 120
EEVFGKHVSNAPLTKLPIKCFLDFKAGGSLCHILAAAYKFKSDQGWRRYDFQNPSRMDRN
Sbjct: 61 EEVFGKHVSNAPLTKLPIKCFLDFKAGGSLCHILAAAYKFKSDQGWRRYDFQNPSRMDRN 120
Query: 121 VEMFMTIEKSLVQNNCLSRPNIFLCPEIEPKLLGKLKDIIKRHQGTVTEDKNNASHVVYP 180
VEMFMTIEKSLVQNNCLSRPNIFLCPEIEPKLLGKLKDIIKRHQGTVTEDKNNASHVVYP
Sbjct: 121 VEMFMTIEKSLVQNNCLSRPNIFLCPEIEPKLLGKLKDIIKRHQGTVTEDKNNASHVVYP 180
Query: 181 VPGNLEEEEWVRPVMKRDKQVLLHWGYYPDSYDTWIPASEIEASVEDAPTPEKPRKVHAK 240
VPGNLEEEEWVRPVMKRDKQVLLHWGYYPDSYDTWIPASEIEASVEDAPTPEKPRKVHAK
Sbjct: 181 VPGNLEEEEWVRPVMKRDKQVLLHWGYYPDSYDTWIPASEIEASVEDAPTPEKPRKVHAK 240
Query: 241 WILDTDTFNEWMNEEDYEVNDDKNPVSRRKKISAKTLTDEVNSPDSDRRDKKGGNYKKRK 300
WILDTDTFNEWMNEEDYEVNDDKNPVSRRKKISAKTLTDEVNSPDSDRRDKKGGNYKKRK
Sbjct: 241 WILDTDTFNEWMNEEDYEVNDDKNPVSRRKKISAKTLTDEVNSPDSDRRDKKGGNYKKRK 300
Query: 301 RSPSPSPTPEAKKKNAKKGPSTPYTKSKRGHREEEQEDLTKDMDEPSPVPNVEEVTLPKT 360
RSPSPSPTPEAKKKNAKKGPSTPYTKSKRGHREEEQEDLTKDMDEPSPVPNVEEVTLPKT
Sbjct: 301 RSPSPSPTPEAKKKNAKKGPSTPYTKSKRGHREEEQEDLTKDMDEPSPVPNVEEVTLPKT 360
Query: 361 VNTKKDSESAPVKGGTMTDLDEQEDESMETTGKDEDENSTGNKGEQTKNPDLHEDNVTEQ 420
VNTKKDSESAPVKGGTMTDLDEQEDESMETTGKDEDENSTGNKGEQTKNPDLHEDNVTEQ
Sbjct: 361 VNTKKDSESAPVKGGTMTDLDEQEDESMETTGKDEDENSTGNKGEQTKNPDLHEDNVTEQ 420
Query: 421 THHIIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEY 480
THHIIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEY
Sbjct: 421 THHIIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEY 480
Query: 481 LTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDAESRPTPMGPPPTSHFHVLADTPSG 540
LTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDAESRPTPMGPPPTSHFHVLADTPSG
Sbjct: 481 LTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDAESRPTPMGPPPTSHFHVLADTPSG 540
Query: 541 LVPLQPKTPQGRQVDADTKAGRKGKELDDLVPETAKGKPELQTSASQQMLNFPDKGKEKP 600
LVPLQPKTPQGRQVDADTKAGRKGKELDDLVPETAKGKPELQTSASQQMLNFPDKGKEKP
Sbjct: 541 LVPLQPKTPQGRQVDADTKAGRKGKELDDLVPETAKGKPELQTSASQQMLNFPDKGKEKP 600
Query: 601 TDMQNFGLRTDMYTKKNVPSKSKAAASATREWTEQETLLLLEALEMYKDDWNKVSEHVGS 660
TDMQNFGLRTDMYTKKNVPSKSKAAASATREWTEQETLLLLEALEMYKDDWNKVSEHVGS
Sbjct: 601 TDMQNFGLRTDMYTKKNVPSKSKAAASATREWTEQETLLLLEALEMYKDDWNKVSEHVGS 660
Query: 661 RTQDECILHFLRLPIEDPYLEDSEASLGPLAYQPIPFSQSGNPVMSTVAFLASVVDPRVA 720
RTQDECILHFLRLPIEDPYLEDSEASLGPLAYQPIPFSQSGNPVMSTVAFLASVVDPRVA
Sbjct: 661 RTQDECILHFLRLPIEDPYLEDSEASLGPLAYQPIPFSQSGNPVMSTVAFLASVVDPRVA 720
Query: 721 SAAAKSALEEFSKMKEEVPTALVEAHVRKVEEAAKVTGKADPAFGLESSGIAGTTSDEPE 780
SAAAKSALEEFSKMKEEVPTALVEAHVRKVEEAAKVTGKADPAFGLESSGIAGTTSDEPE
Sbjct: 721 SAAAKSALEEFSKMKEEVPTALVEAHVRKVEEAAKVTGKADPAFGLESSGIAGTTSDEPE 780
Query: 781 RIEESGNDEARVEGQATDEKKEPKEPREGGGAIEEEAKEKTSEAPKKDEEKGKEGDSEKE 840
RIEESGNDEARVEGQATDEKKEPKEPREGGGAIEEEAKEKTSEAPKKDEEKGKEGDSEKE
Sbjct: 781 RIEESGNDEARVEGQATDEKKEPKEPREGGGAIEEEAKEKTSEAPKKDEEKGKEGDSEKE 840
Query: 841 SEKSDGDPIVDPEKEKEPKEGQEEVLKEVVESEGERKTKVERDIGEGNLSTAAAAALAAA 900
SEKSDGDPIVDPEKEKEPKEGQEEVLKEVVESEGERKTKVERDIGEGNLSTAAAAALAAA
Sbjct: 841 SEKSDGDPIVDPEKEKEPKEGQEEVLKEVVESEGERKTKVERDIGEGNLSTAAAAALAAA 900
Query: 901 AVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREREALEYQRQQLLA 960
AVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREREALEYQRQQLLA
Sbjct: 901 AVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREREALEYQRQQLLA 960
Query: 961 DRQAFHMEQLKYAEMRARQQHFQQMHQQQQQPPPALPPGSQPIPPTGAAGPPAVHGLAVA 1020
DRQAFHMEQLKYAEMRARQQHFQQMHQQQQQPPPALPPGSQPIPPTGAAGPPAVHGLAVA
Sbjct: 961 DRQAFHMEQLKYAEMRARQQHFQQMHQQQQQPPPALPPGSQPIPPTGAAGPPAVHGLAVA 1020
Query: 1021 PASVVPAPAGSGAPPGSLGPSEQIGQAGSTAGPQQQQPAGAPQPGAVPPGVPPPGPHGPS 1080
PASVVPAPAGSGAPPGSLGPSEQIGQAGSTAGPQQQQPAGAPQPGAVPPGVPPPGPHGPS
Sbjct: 1021 PASVVPAPAGSGAPPGSLGPSEQIGQAGSTAGPQQQQPAGAPQPGAVPPGVPPPGPHGPS 1080
Query: 1081 PFPNQQTPPSMMPGAVPGSGHPGVA----------------------DPGTPLPPDPTAP 1118
PFPNQQTPPSMMPGAVPGSGHPGVA DPGTPLPPDPTAP
Sbjct: 1081 PFPNQQTPPSMMPGAVPGSGHPGVAAQSPAIVAAVQGNLLPSASPLPDPGTPLPPDPTAP 1140
Query: 1119 SPGTVTPVPPPQ 1130
SPGTVTPVPPPQ
Sbjct: 1141 SPGTVTPVPPPQ 1152
>gi|21237805 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin c2 isoform a [Homo sapiens]
Length = 1214
Score = 2172 bits (5629), Expect = 0.0
Identities = 1082/1126 (96%), Positives = 1082/1126 (96%), Gaps = 38/1126 (3%)
Query: 1 MAVRKKDGGPNVKYYEAADTVTQFDNVRLWLGKNYKKYIQAEPPTNKSLSSLVVQLLQFQ 60
MAVRKKDGGPNVKYYEAADTVTQFDNVRLWLGKNYKKYIQAEPPTNKSLSSLVVQLLQFQ
Sbjct: 1 MAVRKKDGGPNVKYYEAADTVTQFDNVRLWLGKNYKKYIQAEPPTNKSLSSLVVQLLQFQ 60
Query: 61 EEVFGKHVSNAPLTKLPIKCFLDFKAGGSLCHILAAAYKFKSDQGWRRYDFQNPSRMDRN 120
EEVFGKHVSNAPLTKLPIKCFLDFKAGGSLCHILAAAYKFKSDQGWRRYDFQNPSRMDRN
Sbjct: 61 EEVFGKHVSNAPLTKLPIKCFLDFKAGGSLCHILAAAYKFKSDQGWRRYDFQNPSRMDRN 120
Query: 121 VEMFMTIEKSLVQNNCLSRPNIFLCPEIEPKLLGKLKDIIKRHQGTVTEDKNNASHVVYP 180
VEMFMTIEKSLVQNNCLSRPNIFLCPEIEPKLLGKLKDIIKRHQGTVTEDKNNASHVVYP
Sbjct: 121 VEMFMTIEKSLVQNNCLSRPNIFLCPEIEPKLLGKLKDIIKRHQGTVTEDKNNASHVVYP 180
Query: 181 VPGNLEEEEWVRPVMKRDKQVLLHWGYYPDSYDTWIPASEIEASVEDAPTPEKPRKVHAK 240
VPGNLEEEEWVRPVMKRDKQVLLHWGYYPDSYDTWIPASEIEASVEDAPTPEKPRKVHAK
Sbjct: 181 VPGNLEEEEWVRPVMKRDKQVLLHWGYYPDSYDTWIPASEIEASVEDAPTPEKPRKVHAK 240
Query: 241 WILDTDTFNEWMNEEDYEVNDDKNPVSRRKKISAKTLTDEVNSPDSDRRDKKGGNYKKRK 300
WILDTDTFNEWMNEEDYEVNDDKNPVSRRKKISAKTLTDEVNSPDSDRRDKKGGNYKKRK
Sbjct: 241 WILDTDTFNEWMNEEDYEVNDDKNPVSRRKKISAKTLTDEVNSPDSDRRDKKGGNYKKRK 300
Query: 301 RSPSPSPTPEAKKKNAKKGPSTPYTKSKRGHREEEQEDLTKDMDEPSPVPNVEEVTLPKT 360
RSPSPSPTPEAKKKNAKKGPSTPYTKSKRGHREEEQEDLTKDMDEPSPVPNVEEVTLPKT
Sbjct: 301 RSPSPSPTPEAKKKNAKKGPSTPYTKSKRGHREEEQEDLTKDMDEPSPVPNVEEVTLPKT 360
Query: 361 VNTKKDSESAPVKGGTMTDLDEQEDESMETTGKDEDENSTGNKGEQTKNPDLHEDNVTEQ 420
VNTKKDSESAPVKGGTMTDLDEQEDESMETTGKDEDENSTGNKGEQTKNPDLHEDNVTEQ
Sbjct: 361 VNTKKDSESAPVKGGTMTDLDEQEDESMETTGKDEDENSTGNKGEQTKNPDLHEDNVTEQ 420
Query: 421 THHIIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEY 480
THHIIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEY
Sbjct: 421 THHIIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEY 480
Query: 481 LTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDAESRPTPMGPPPTSHFHVLADTPSG 540
LTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDAESRPTPMGPPPTSHFHVLADTPSG
Sbjct: 481 LTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDAESRPTPMGPPPTSHFHVLADTPSG 540
Query: 541 LVPLQPKTPQGRQVDADTKAGRKGKELDDLVPETAKGKPELQTSASQQMLNFPDKGKEKP 600
LVPLQPKTPQ QTSASQQMLNFPDKGKEKP
Sbjct: 541 LVPLQPKTPQ-------------------------------QTSASQQMLNFPDKGKEKP 569
Query: 601 TDMQNFGLRTDMYTKKNVPSKSKAAASATREWTEQETLLLLEALEMYKDDWNKVSEHVGS 660
TDMQNFGLRTDMYTKKNVPSKSKAAASATREWTEQETLLLLEALEMYKDDWNKVSEHVGS
Sbjct: 570 TDMQNFGLRTDMYTKKNVPSKSKAAASATREWTEQETLLLLEALEMYKDDWNKVSEHVGS 629
Query: 661 RTQDECILHFLRLPIEDPYLEDSEASLGPLAYQPIPFSQSGNPVMSTVAFLASVVDPRVA 720
RTQDECILHFLRLPIEDPYLEDSEASLGPLAYQPIPFSQSGNPVMSTVAFLASVVDPRVA
Sbjct: 630 RTQDECILHFLRLPIEDPYLEDSEASLGPLAYQPIPFSQSGNPVMSTVAFLASVVDPRVA 689
Query: 721 SAAAKSALEEFSKMKEEVPTALVEAHVRKVEEAAKVTGKADPAFGLESSGIAGTTSDEPE 780
SAAAKSALEEFSKMKEEVPTALVEAHVRKVEEAAKVTGKADPAFGLESSGIAGTTSDEPE
Sbjct: 690 SAAAKSALEEFSKMKEEVPTALVEAHVRKVEEAAKVTGKADPAFGLESSGIAGTTSDEPE 749
Query: 781 RIEESGNDEARVEGQATDEKKEPKEPREGGGAIEEEAKEKTSEAPKKDEEKGKEGDSEKE 840
RIEESGNDEARVEGQATDEKKEPKEPREGGGAIEEEAKEKTSEAPKKDEEKGKEGDSEKE
Sbjct: 750 RIEESGNDEARVEGQATDEKKEPKEPREGGGAIEEEAKEKTSEAPKKDEEKGKEGDSEKE 809
Query: 841 SEKSDGDPIVDPEKEKEPKEGQEEVLKEVVESEGERKTKVERDIGEGNLSTAAAAALAAA 900
SEKSDGDPIVDPEKEKEPKEGQEEVLKEVVESEGERKTKVERDIGEGNLSTAAAAALAAA
Sbjct: 810 SEKSDGDPIVDPEKEKEPKEGQEEVLKEVVESEGERKTKVERDIGEGNLSTAAAAALAAA 869
Query: 901 AVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREREALEYQRQQLLA 960
AVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREREALEYQRQQLLA
Sbjct: 870 AVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREREALEYQRQQLLA 929
Query: 961 DRQAFHMEQLKYAEMRARQQHFQQMHQQQQQPPPALPPGSQPIPPTGAAGPPAVHGLAVA 1020
DRQAFHMEQLKYAEMRARQQHFQQMHQQQQQPPPALPPGSQPIPPTGAAGPPAVHGLAVA
Sbjct: 930 DRQAFHMEQLKYAEMRARQQHFQQMHQQQQQPPPALPPGSQPIPPTGAAGPPAVHGLAVA 989
Query: 1021 PASVVPAPAGSGAPPGSLGPSEQIGQAGSTAGPQQQQPAGAPQPGAVPPGVPPPGPHGPS 1080
PASVVPAPAGSGAPPGSLGPSEQIGQAGSTAGPQQQQPAGAPQPGAVPPGVPPPGPHGPS
Sbjct: 990 PASVVPAPAGSGAPPGSLGPSEQIGQAGSTAGPQQQQPAGAPQPGAVPPGVPPPGPHGPS 1049
Query: 1081 PFPNQQTPPSMMPGAVPGSGHPGVADP-------GTPLPPDPTAPS 1119
PFPNQQTPPSMMPGAVPGSGHPGVA G P PP P APS
Sbjct: 1050 PFPNQQTPPSMMPGAVPGSGHPGVAGNAPLGLPFGMPPPPPPPAPS 1095
>gi|188536047 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin c1 [Homo sapiens]
Length = 1105
Score = 1337 bits (3459), Expect = 0.0
Identities = 700/1137 (61%), Positives = 845/1137 (74%), Gaps = 85/1137 (7%)
Query: 4 RKKDGGPNVKYYEAADTVTQFDNVRLWLGKNYKKYIQAEPPTNKSLSSLVVQLLQFQEEV 63
R+KDGGP K++E+ +TV+Q D+VR+WLGK+YKKY+ A+ PTNK+L+ LVVQLLQFQE+
Sbjct: 32 RRKDGGPATKFWESPETVSQLDSVRVWLGKHYKKYVHADAPTNKTLAGLVVQLLQFQEDA 91
Query: 64 FGKHVSNAPLTKLPIKCFLDFKAGGSLCHILAAAYKFKSDQGWRRYDFQNPSRMDRNVEM 123
FGKHV+N TKLP KCF+DFKAGG+LCHIL AAYK+K++QGWRR+D QNPSRMDRNVEM
Sbjct: 92 FGKHVTNPAFTKLPAKCFMDFKAGGALCHILGAAYKYKNEQGWRRFDLQNPSRMDRNVEM 151
Query: 124 FMTIEKSLVQNNCLSRPNIFLCPEIEPKLLGKLKDIIKRHQGTVTEDKNNASHVVYPVPG 183
FM IEK+LVQNNCL+RPNI+L P+I+ KL KLKDIIKRHQGT T++K+ ASH +YP
Sbjct: 152 FMNIEKTLVQNNCLTRPNIYLIPDIDLKLANKLKDIIKRHQGTFTDEKSKASHHIYPYSS 211
Query: 184 NLEEEEWVRPVMKRDKQVLLHWGYYPDSYDTWIPASEIEASVEDAPTPEKPRKVHAKWIL 243
+ ++EEW+RPVM+++KQVL+HWG+YPDSYDTW+ +++++A +ED P PEKP KVH KWIL
Sbjct: 212 SQDDEEWLRPVMRKEKQVLVHWGFYPDSYDTWVHSNDVDAEIEDPPIPEKPWKVHVKWIL 271
Query: 244 DTDTFNEWMNEEDYEVNDDKNPVSRRKKISAKTLTDEVNSPDSDRRDKKGG-NYKKRKRS 302
DTD FNEWMNEEDYEV++++ PVS R++IS K + V SP+ RRD+K N +KRK S
Sbjct: 272 DTDIFNEWMNEEDYEVDENRKPVSFRQRISTKN-EEPVRSPE--RRDRKASANARKRKHS 328
Query: 303 PSPSP-TP-EAKKKNAKKGPSTPYTKSKRGHREEEQEDLTKDMDEPSPVPNVEEVTLPKT 360
PSP P TP E++KK+ KKG ++ Y K + E+EQEDLTKDM++P+PVPN+EEV LPK
Sbjct: 329 PSPPPPTPTESRKKSGKKGQASLYGKRRSQKEEDEQEDLTKDMEDPTPVPNIEEVVLPKN 388
Query: 361 VNTKKDSESAPVKGGTMTDLDEQEDESMETTGKDEDENSTGNKGEQTKNPDLHEDNVTEQ 420
VN KKDSE+ PVKGGT+ DLDEQ++E++ GK++++ + KG+Q+++ DL EDNVTEQ
Sbjct: 389 VNLKKDSENTPVKGGTVADLDEQDEETVTAGGKEDEDPA---KGDQSRSVDLGEDNVTEQ 445
Query: 421 THHIIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEY 480
T+HIIIPSYA+WFDYN +H IERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEY
Sbjct: 446 TNHIIIPSYASWFDYNCIHVIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEY 505
Query: 481 LTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDAESRPTPMGPPPTSHFHVLADTPSG 540
LTSTACRRNL GDVCA+MRVHAFLEQWGL+NYQVD ESRP MGPPPT HF+VLADTPSG
Sbjct: 506 LTSTACRRNLTGDVCAVMRVHAFLEQWGLVNYQVDPESRPMAMGPPPTPHFNVLADTPSG 565
Query: 541 LVPLQPKTPQGRQVDADTKAGRKGKELDDLVPETAKGKPELQTSASQQMLNFPDKGKEKP 600
LVPL ++PQ VP A+QQMLNFP+K KEKP
Sbjct: 566 LVPLHLRSPQ--------------------VP------------AAQQMLNFPEKNKEKP 593
Query: 601 TDMQNFGLRTDMYTKKNVPSKSKAAASATREWTEQETLLLLEALEMYKDDWNKVSEHVGS 660
D+QNFGLRTD+Y+KK + +KSK A SA REWTEQETLLLLEALEMYKDDWNKVSEHVGS
Sbjct: 594 VDLQNFGLRTDIYSKKTL-AKSKGA-SAGREWTEQETLLLLEALEMYKDDWNKVSEHVGS 651
Query: 661 RTQDECILHFLRLPIEDPYLEDSEASLGPLAYQPIPFSQSGNPVMSTVAFLASVVDPRVA 720
RTQDECILHFLRLPIEDPYLE+S+ASLGPLAYQP+PFSQSGNPVMSTVAFLASVVDPRVA
Sbjct: 652 RTQDECILHFLRLPIEDPYLENSDASLGPLAYQPVPFSQSGNPVMSTVAFLASVVDPRVA 711
Query: 721 SAAAKSALEEFSKMKEEVPTALVEAHVRKVEEAAKVTGKADPAFGLESSGIAGTTSDEPE 780
SAAAK+ALEEFS+++EEVP LVEAHV+KV+EAA+ +GK DP +GLESS IAGT DEPE
Sbjct: 712 SAAAKAALEEFSRVREEVPLELVEAHVKKVQEAARASGKVDPTYGLESSCIAGTGPDEPE 771
Query: 781 RIEESGNDEARVEGQATDEKKEPKEPREGGGAIEEEAKEKTSEAPKKDEEKGKEGDSEKE 840
++E G +E ++E ++ E E + +E E E +K ++G++EK
Sbjct: 772 KLE--GAEEEKMEADPDGQQPEKAENK-----VENETDEG---------DKAQDGENEKN 815
Query: 841 SEKSDGDPIVDPEKEKEPKEGQEEVLKEVVESEGER-----KTKVERDIGEGNLSTAAAA 895
SEK D V + + E KE +E KE+ ++ ER K KVE +I EGN++TAAAA
Sbjct: 816 SEKEQ-DSEVSEDTKSEEKETEEN--KELTDTCKERESDTGKKKVEHEISEGNVATAAAA 872
Query: 896 ALAAAAVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREREALEYQR 955
ALA+AA KAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDRE+EALE QR
Sbjct: 873 ALASAATKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREKEALEQQR 932
Query: 956 QQLLADRQAFHMEQLKYAEMRARQQHFQQMHQQQQQPPPALPPGSQPIPPTGAAGPPAVH 1015
QQLL +RQ FHMEQLKYAE+RARQQ QQ H Q Q G + P GAAG P +
Sbjct: 933 QQLLTERQNFHMEQLKYAELRARQQMEQQQHGQNPQQAHQ-HSGGPGLAPLGAAGHPGMM 991
Query: 1016 GLAVAPASVV---------PAPAGSGAPPGSLGPSEQIGQAGSTAGPQQQQPAGAPQPGA 1066
P + P G PGS+ P + + P+G+ G
Sbjct: 992 PHQQPPPYPLMHHQMPPPHPPQPGQIPGPGSMMPGQHMPGRMIPTVAANIHPSGS---GP 1048
Query: 1067 VPPGVPPP-----GPHGPSPFPNQQTPPSMMPGAVPGSGHPGVADPGTPLPPDPTAP 1118
PPG+PP GP P PN PP P GV P P PP AP
Sbjct: 1049 TPPGMPPMPGNILGPRVPLTAPNGMYPPPPQQQPPPPPPADGVPPPPAPGPPASAAP 1105
>gi|33356148 formin-like 1 [Homo sapiens]
Length = 1100
Score = 77.8 bits (190), Expect = 5e-14
Identities = 73/237 (30%), Positives = 95/237 (40%), Gaps = 45/237 (18%)
Query: 920 ALLVETQMKKLEIKLRHFEELET----IMDREREALEYQRQQLLADRQAFHMEQLKYAEM 975
ALL +T+ K L H EEL+ + +R R+A ++ + + + +
Sbjct: 386 ALLEDTETKNAV--LEHMEELQEQVALLTERLRDAENESMAKIAELEKQLSQARKELETL 443
Query: 976 RARQQHFQQMHQQQQQPPPALPPGSQPIPPTGAA----------------GPPAVHGLAV 1019
R R M ++ P P P + P P+ GP + +
Sbjct: 444 RERFSESTAMGASRRPPEPEKAPPAAPTRPSALELKVEELEEKGLIRILRGPGDAVSIEI 503
Query: 1020 APASVVPAPAGSGAP-PGSLGPSEQIGQAGSTAGPQQQ-QPAGAPQPGAVPPGVPPPGPH 1077
P +V P+G AP PG T P PA P PGA PP PPP P
Sbjct: 504 LPVAVA-TPSGGDAPTPGV-----------PTGSPSPDLAPAAEPAPGAAPP-PPPPLPG 550
Query: 1078 GPSPFPNQQTPPSMMPGA--VPGSGHPGVADP---GTPLPPDPTAPSPGTVTPVPPP 1129
PSP Q+ PPS P A +PGS P A P P PP P P PGT PVPPP
Sbjct: 551 LPSP---QEAPPSAPPQAPPLPGSPEPPPAPPLPGDLPPPPPPPPPPPGTDGPVPPP 604
Score = 49.7 bits (117), Expect = 2e-05
Identities = 35/106 (33%), Positives = 40/106 (37%), Gaps = 15/106 (14%)
Query: 992 PPPALPPGSQPIPPTGAAGPPAVHGLAVAPASVVPAPAGSGAPPGSLGPSEQIGQAGSTA 1051
P P L P ++P P PP + GL + AP + PGS P
Sbjct: 526 PSPDLAPAAEPAPGAAPPPPPPLPGLPSPQEAPPSAPPQAPPLPGSPEPP---------- 575
Query: 1052 GPQQQQPAGAPQPGAVPPGVPPPGPHGPSPFPNQQTPPSMMPGAVP 1097
P P P P PP PPPG GP P P PP PG P
Sbjct: 576 -PAPPLPGDLPPPPPPPP--PPPGTDGPVPPPPPPPPPP--PGGPP 616
Score = 48.5 bits (114), Expect = 4e-05
Identities = 37/110 (33%), Positives = 46/110 (41%), Gaps = 13/110 (11%)
Query: 999 GSQPIP--PTGAAGPPAVHGLAVAPASVVPAPAGSGAPPGSLGPSEQIGQAGSTAGPQQQ 1056
G P P PTG+ P +APA+ PAP + PP L +A +A PQ
Sbjct: 514 GDAPTPGVPTGSPSPD------LAPAAE-PAPGAAPPPPPPLPGLPSPQEAPPSAPPQAP 566
Query: 1057 QPAGAPQPGAVPPGV----PPPGPHGPSPFPNQQTPPSMMPGAVPGSGHP 1102
G+P+P PP PPP P P P + PP P P G P
Sbjct: 567 PLPGSPEPPPAPPLPGDLPPPPPPPPPPPGTDGPVPPPPPPPPPPPGGPP 616
Score = 40.0 bits (92), Expect = 0.013
Identities = 25/64 (39%), Positives = 29/64 (45%), Gaps = 9/64 (14%)
Query: 991 QPPPALP-PGSQPIPPTGAAGPPAVHGLAVAPASVVPAPAGSGAPPGSLGPSEQIGQAGS 1049
+PPPA P PG P PP PP G V P P PPG GP + +G+ S
Sbjct: 573 EPPPAPPLPGDLPPPPPPPPPPPGTDG------PVPPPPPPPPPPPG--GPPDALGRRDS 624
Query: 1050 TAGP 1053
GP
Sbjct: 625 ELGP 628
>gi|4826998 splicing factor proline/glutamine rich (polypyrimidine
tract binding protein associated) [Homo sapiens]
Length = 707
Score = 76.3 bits (186), Expect = 2e-13
Identities = 57/164 (34%), Positives = 62/164 (37%), Gaps = 31/164 (18%)
Query: 986 HQQQQQPPPALPPGSQPIP------------------PTGAAGPPAVHGLAVAPASVVPA 1027
HQQQQQPPP PP QP P P ++ P G AP
Sbjct: 66 HQQQQQPPPQQPPPQQPPPHQPPPHPQPHQQQQPPPPPQDSSKPVVAQGPGPAPGVGSAP 125
Query: 1028 PAGSGAPPGSLGPSEQIGQAGSTAGPQQQQPAGAPQPGAVPPGVPPPGP--HGPSPFPNQ 1085
PA S APP + P GS GP P P + PPG PPP P G P Q
Sbjct: 126 PASSSAPPAT--PPTSGAPPGSGPGP---TPTPPPAVTSAPPGAPPPTPPSSGVPTTPPQ 180
Query: 1086 QTPPSMMPGAVPGSGHPGVADPGTPLPPDPTAPSPGTVTPVPPP 1129
P P AVPG G PG P P P G + P P
Sbjct: 181 AGGPPPPPAAVPGPG------PGPKQGPGPGGPKGGKMPGGPKP 218
Score = 61.2 bits (147), Expect = 5e-09
Identities = 51/153 (33%), Positives = 59/153 (38%), Gaps = 32/153 (20%)
Query: 984 QMHQQQQQPPP---------ALPPGSQP----IPPTGAAGPPAVHGLAVAPA------SV 1024
Q HQQQQ PPP A PG P PP ++ PPA + AP +
Sbjct: 92 QPHQQQQPPPPPQDSSKPVVAQGPGPAPGVGSAPPASSSAPPATPPTSGAPPGSGPGPTP 151
Query: 1025 VPAPAGSGAPPGS---LGPSEQIGQAGSTAGPQQQQPAGAPQPGAVPPGVPPPG------ 1075
P PA + APPG+ PS + AG PA P PG P P PG
Sbjct: 152 TPPPAVTSAPPGAPPPTPPSSGVPTTPPQAGGPPPPPAAVPGPGPGPKQGPGPGGPKGGK 211
Query: 1076 -PHGPSPFPNQQTPPSMMPGAVPGSGHPGVADP 1107
P GP P P PG P H G +P
Sbjct: 212 MPGGPKPGGG---PGLSTPGGHPKPPHRGGGEP 241
Score = 51.6 bits (122), Expect = 4e-06
Identities = 44/134 (32%), Positives = 49/134 (36%), Gaps = 27/134 (20%)
Query: 1011 PPAVHGLAVAPASVVPAPAGSGA-PPGSLGPSEQIGQAGSTAGPQQQQPAGAPQPGAVPP 1069
PP GL + P P SG PP P Q QQQ P P P PP
Sbjct: 34 PPPGMGLNQNRGPMGPGPGQSGPKPPIPPPPPHQ---------QQQQPPPQQPPPQQPPP 84
Query: 1070 GVPPPGPHGPSPFPNQQTPP----------SMMPGAVPGSGH-PGVADPGTPLPPDPTAP 1118
PPP P P QQ PP + PG PG G P + P P +
Sbjct: 85 HQPPPHPQ---PHQQQQPPPPPQDSSKPVVAQGPGPAPGVGSAPPASSSAPPATPPTSGA 141
Query: 1119 SPGT---VTPVPPP 1129
PG+ TP PPP
Sbjct: 142 PPGSGPGPTPTPPP 155
Score = 45.4 bits (106), Expect = 3e-04
Identities = 38/120 (31%), Positives = 44/120 (36%), Gaps = 15/120 (12%)
Query: 992 PPPALPPGSQPIPPTGAAGPPAVHGLAVAPASVVPAPA-GSGAPPGSLGPS--EQIGQAG 1048
PPP P P P A GPP P + VP P G PG GP + G
Sbjct: 165 PPPTPPSSGVPTTPPQAGGPPP-------PPAAVPGPGPGPKQGPGPGGPKGGKMPGGPK 217
Query: 1049 STAGPQQQQPAGAPQPGAVPPGVPPPGPHGPSPFPNQ--QTPPSMMPGAVPGSGHPGVAD 1106
GP P G P+P G P G P+ Q Q PP PG G ++D
Sbjct: 218 PGGGPGLSTPGGHPKPPHRGGGEPRGGRQHHPPYHQQHHQGPP---PGGPGGRSEEKISD 274
Score = 40.8 bits (94), Expect = 0.007
Identities = 30/97 (30%), Positives = 35/97 (36%), Gaps = 12/97 (12%)
Query: 1033 APPGSLGPSEQIGQAGSTAGPQQQQPAGAPQPGAVPPGVPPPGPHGPSPFPNQQTPPSMM 1092
+PP +G ++ G G GP Q P P +PPP PH P Q PP
Sbjct: 33 SPPPGMGLNQNRGPMGP--GPGQSGPK---------PPIPPPPPHQQQQQPPPQQPPPQQ 81
Query: 1093 PGAVPGSGHPGVADPGTPLPPDPTAPSPGTVTPVPPP 1129
P HP P PP P S V P P
Sbjct: 82 PPPHQPPPHPQPHQQQQP-PPPPQDSSKPVVAQGPGP 117
>gi|7706501 WW domain binding protein 11 [Homo sapiens]
Length = 641
Score = 76.3 bits (186), Expect = 2e-13
Identities = 82/307 (26%), Positives = 121/307 (39%), Gaps = 36/307 (11%)
Query: 828 DEEKGKEGDSEKESEKSDGDPIVDPEKEKEPKEGQEEVLKEVVESEGERKTKVERDIGEG 887
D++K + + +++KSDG+ +G E V ++ GER E+ G
Sbjct: 263 DQDKHDDSTDDSDTDKSDGE-----------SDGDEFVHRD----NGERDNNEEKKSG-- 305
Query: 888 NLSTAAAAALAAAAVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDRE 947
LS A + K K++ +++ L A+++ +++ + R EE D +
Sbjct: 306 -LSVRFADMPGKSRKKKKNM-----KELTPLQAMMLRMAGQEIPEEGREVEEFSEDDDED 359
Query: 948 -REALEYQRQQLLADRQAFHMEQLKYAEMRARQQHFQQMHQQQQQPPPALPP--GSQPIP 1004
+ E ++Q ++ H + A + + Q Q PP PP G P P
Sbjct: 360 DSDDSEAEKQSQKQHKEESHSDGTSTASSQQQAPPQSVPPSQIQAPPMPGPPPLGPPPAP 419
Query: 1005 PTGAAGPPAVHGLAVAPASVVPAPAGSGAPPGSLGPSEQIGQAGSTAGPQQQQPAGAPQP 1064
P GPP GL P P PG GP ++ G G P G P P
Sbjct: 420 PLRPPGPPT--GLPPGPPPGAPPFLRPPGMPGLRGPLPRLLPPGPPPGRPPGPPPGPP-P 476
Query: 1065 GAVPPGVPPPGPHGPSPFPNQQTPPSMMPGAVPGSGHPGVADPGTPLPPD--PTAPSPGT 1122
G +PPG PP GP P P PP + P PG P + P P PP P AP P
Sbjct: 477 G-LPPGPPPRGPPPRLPPP---APPGIPPPR-PGMMRPPLVPPLGPAPPGLFPPAPLPNP 531
Query: 1123 VTPVPPP 1129
PP
Sbjct: 532 GVLSAPP 538
Score = 69.7 bits (169), Expect = 1e-11
Identities = 85/313 (27%), Positives = 125/313 (39%), Gaps = 63/313 (20%)
Query: 830 EKGKEGDSEKESEKSDGDPIVDPEKEKEPKEGQEEVLKEVVESEGERKTKVERDIGEGNL 889
++G + D SE DG P + + + + K ES+G+ V RD GE +
Sbjct: 242 QRGHDDDVSSTSE-DDGYPEDMDQDKHDDSTDDSDTDKSDGESDGDEF--VHRDNGERDN 298
Query: 890 STAAAAALAAAAVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDRERE 949
+ + L+ V+ + +K K++ L T ++ + +++ E I + RE
Sbjct: 299 NEEKKSGLS---VRFADMPGKSRKKKKNMKEL---TPLQAMMLRMAGQE----IPEEGRE 348
Query: 950 ALEYQRQQLLADRQAFHMEQLKYAEMRARQQHFQQMHQ--------QQQQPPPALPPGSQ 1001
E+ D AE ++++QH ++ H QQQ PP ++PP
Sbjct: 349 VEEFSEDDDEDDSDDSE------AEKQSQKQHKEESHSDGTSTASSQQQAPPQSVPPSQI 402
Query: 1002 PIPPTGAAGPPAVHGLAVAPASVVPAPAGSGAPPGSLGPSEQIGQAGSTAGPQQQQPAGA 1061
PP GPP + G AP P P +G PPG P GA
Sbjct: 403 QAPPM--PGPPPL-GPPPAPPLRPPGPP-TGLPPGP--------------------PPGA 438
Query: 1062 PQPGAVPPGVPPPGPHGPSPFPNQQTPPSMMPGAVPGSGHPGVADPGTPLPPDPTAPSPG 1121
P P PPG+P G GP P + PP PG PG P PG P P P P P
Sbjct: 439 P-PFLRPPGMP--GLRGPLP---RLLPPGPPPGRPPGP--PPGPPPGLPPGPPPRGPPPR 490
Query: 1122 TVTP----VPPPQ 1130
P +PPP+
Sbjct: 491 LPPPAPPGIPPPR 503
Score = 31.6 bits (70), Expect = 4.4
Identities = 37/162 (22%), Positives = 59/162 (36%), Gaps = 29/162 (17%)
Query: 922 LVETQMKKLEIKLRH-FEELETIMDREREALEYQRQQLLADRQAFHMEQLKYAEMRAR-Q 979
L E +K KLR FE + + ++E + + ++L +++Y + RA+
Sbjct: 73 LNEKVLKDKRKKLRETFERILRLYEKENPDIYKELRKL----------EVEYEQKRAQLS 122
Query: 980 QHFQQMHQQQQQPPPALPPGSQPIPPTGAAGPPAVHGLAVAPASVVPAPAGSGAPPGSLG 1039
Q+F + Q ++P P P+ + P PP L
Sbjct: 123 QYFDAVKNAQHVEVESIPLPDMPHAPSNIL--------------IQDIPLPGAQPPSILK 168
Query: 1040 PSEQIGQAGSTAGPQQQQPAGAPQ--PGAVPPGVPPPGPHGP 1079
+ G G P+ PG PPG PPPGP P
Sbjct: 169 KTSAYGPPTRAVSILPLLGHGVPRLPPGRKPPG-PPPGPPPP 209
Score = 30.4 bits (67), Expect = 9.9
Identities = 22/85 (25%), Positives = 38/85 (44%), Gaps = 15/85 (17%)
Query: 790 ARVEGQATDEKKEPKEP--------REGGGAIEEEAKEKTSEAPKKDEEKGKEGDSEKES 841
A + G++ +KK KE R G I EE +E + DE+ + ++EK+S
Sbjct: 311 ADMPGKSRKKKKNMKELTPLQAMMLRMAGQEIPEEGREVEEFSEDDDEDDSDDSEAEKQS 370
Query: 842 EK-------SDGDPIVDPEKEKEPK 859
+K SDG +++ P+
Sbjct: 371 QKQHKEESHSDGTSTASSQQQAPPQ 395
>gi|57863314 vacuolar protein sorting 37C [Homo sapiens]
Length = 355
Score = 72.8 bits (177), Expect = 2e-12
Identities = 56/158 (35%), Positives = 68/158 (43%), Gaps = 16/158 (10%)
Query: 987 QQQQQPPPALPPGSQPIPPTGA--AGPPAVHGLAVAPASVVPAPAGSGAPPGSLGPSEQI 1044
++Q QPP A+PP P P+ + GP A L AP VV P+ P G P+ Q+
Sbjct: 191 EEQPQPPLAMPPYPLPYSPSPSLPVGPTAHGALPPAPFPVVSQPSFYSGPLGPTYPAAQL 250
Query: 1045 G---QAGSTAGPQQQQPAGAPQP----GAVPPGVPPPGPHGPSPFPNQQTPPSMMPGAVP 1097
G AG + PQ+ P P GA PG P G PSP QQ+P G P
Sbjct: 251 GPRGAAGYSWSPQRSMPPRPGYPGTPMGASGPGYPLRGGRAPSPGYPQQSPYPATGGKPP 310
Query: 1098 G------SGHPGVADPGTPL-PPDPTAPSPGTVTPVPP 1128
PG P PL PP P P+P P PP
Sbjct: 311 YPIQPQLPSFPGQPQPSVPLQPPYPPGPAPPYGFPPPP 348
Score = 46.2 bits (108), Expect = 2e-04
Identities = 42/137 (30%), Positives = 49/137 (35%), Gaps = 31/137 (22%)
Query: 992 PPPALPPGSQP---------IPPTGAAGPPAVHGLAVAPA-SVVPAPAGSGAPPGSLGPS 1041
PP P SQP P GP G + +P S+ P P G P G+ GP
Sbjct: 224 PPAPFPVVSQPSFYSGPLGPTYPAAQLGPRGAAGYSWSPQRSMPPRPGYPGTPMGASGPG 283
Query: 1042 EQI--GQAGSTAGPQQQ-------------QPAGAPQPGAVPPGVPPPGPHGPSPFPNQQ 1086
+ G+A S PQQ QP PG P VP P+ P P P
Sbjct: 284 YPLRGGRAPSPGYPQQSPYPATGGKPPYPIQPQLPSFPGQPQPSVPLQPPYPPGPAPPYG 343
Query: 1087 TPPSMMPGAVPGSGHPG 1103
PP PG PG
Sbjct: 344 FPPP------PGPAWPG 354
Score = 31.6 bits (70), Expect = 4.4
Identities = 25/78 (32%), Positives = 29/78 (37%), Gaps = 9/78 (11%)
Query: 1053 PQQQQPAGAPQPGAVPPGVPPPGPHGPSPFPNQQ-TPPSMMPGAVPGSGHPGVADPGTPL 1111
P+ Q P PP P P G P +Q PP MP +P P L
Sbjct: 160 PRASQELAGDAPPPRPPPPVRPVPQGTPPVVEEQPQPPLAMP------PYPLPYSPSPSL 213
Query: 1112 PPDPTAPSPGTVTPVPPP 1129
P PTA G + P P P
Sbjct: 214 PVGPTA--HGALPPAPFP 229
Score = 30.8 bits (68), Expect = 7.6
Identities = 39/137 (28%), Positives = 48/137 (35%), Gaps = 36/137 (26%)
Query: 1029 AGSGAPPGSLGPSEQIGQAGSTAGPQQQQPAGAPQPGAVP----PGVP-PPGPHG---PS 1080
AG PP P + Q +Q QP A P +P P +P P HG P+
Sbjct: 167 AGDAPPPRPPPPVRPVPQGTPPVVEEQPQPPLAMPPYPLPYSPSPSLPVGPTAHGALPPA 226
Query: 1081 PFPNQQTP-----------PSMMPGAVPGSGH---------PGVADPGTPL----PPDP- 1115
PFP P P+ G +G+ P PGTP+ P P
Sbjct: 227 PFPVVSQPSFYSGPLGPTYPAAQLGPRGAAGYSWSPQRSMPPRPGYPGTPMGASGPGYPL 286
Query: 1116 ---TAPSPGTVTPVPPP 1129
APSPG P P
Sbjct: 287 RGGRAPSPGYPQQSPYP 303
>gi|4507909 Wiskott-Aldrich syndrome protein [Homo sapiens]
Length = 502
Score = 70.5 bits (171), Expect = 9e-12
Identities = 58/165 (35%), Positives = 71/165 (43%), Gaps = 25/165 (15%)
Query: 983 QQMHQQQQQPPPALP---PGSQPIPP-----TGAAGPPAVHGLAVAPASVVPAPAGSGAP 1034
Q+M +Q+ PPP P P PP G +GP L +AP P P G P
Sbjct: 305 QEMRRQEPLPPPPPPSRGGNQLPRPPIVGGNKGRSGPLPPVPLGIAPPP--PTPRGP-PP 361
Query: 1035 PGSLGPSEQIGQAGSTAGPQQQQPAGAPQPGAVPPGVPPPGP----HGPSPFPNQQTPPS 1090
PG GP A +GP P GA P PP PPP P +GP+P P PP+
Sbjct: 362 PGRGGPPPPPPPATGRSGPLPPPPPGAGGPPMPPPPPPPPPPPSSGNGPAPPP---LPPA 418
Query: 1091 MMP--GAVPGSGHPGVAD---PGTPLPPDPTAPSPGTVTPVPPPQ 1130
++P G PG G + D G L P AP + PPPQ
Sbjct: 419 LVPAGGLAPGGGRGALLDQIRQGIQLNKTPGAPESSALQ--PPPQ 461
Score = 35.4 bits (80), Expect = 0.31
Identities = 34/90 (37%), Positives = 40/90 (44%), Gaps = 21/90 (23%)
Query: 992 PPPALPPGSQPIPPTGAAGPPAVHGLAVAPASVVPA--PAGSGAPPGSLGP-SEQIGQAG 1048
PPP PP P PP+ GP AP + PA PAG AP G G +QI Q
Sbjct: 394 PPP--PPPPPP-PPSSGNGP--------APPPLPPALVPAGGLAPGGGRGALLDQIRQ-- 440
Query: 1049 STAGPQQQQPAGAPQPGAVPPGVPPPGPHG 1078
G Q + GAP+ A+ P PP G
Sbjct: 441 ---GIQLNKTPGAPESSALQP--PPQSSEG 465
>gi|160707881 formin 2 [Homo sapiens]
Length = 1722
Score = 70.5 bits (171), Expect = 9e-12
Identities = 56/163 (34%), Positives = 65/163 (39%), Gaps = 30/163 (18%)
Query: 992 PPPALP-PGSQPIPPTGAAG---PPAVHGLAVAPASVVPAPA--------GSGAPPGSLG 1039
PPP LP G P+PP AG PP + G A+ P +P G+G PP
Sbjct: 922 PPPPLPGAGILPLPPLPGAGIPPPPPLPGAAIPPPPPLPGAGIPLPPPLPGAGIPPPPPL 981
Query: 1040 PSEQIGQAGSTAGPQQQQPAGAPQPGAVPP------GVPPPGP------HGPSPFPNQQT 1087
P I G P P G PP G+PPP P P P P
Sbjct: 982 PGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGI 1041
Query: 1088 PPSMMPGAVPGSGHPGVAD-PGTPLPPDPTAPSPGTVTPVPPP 1129
PP P +PG+G P PG +PP P P PG P PPP
Sbjct: 1042 PP---PPPLPGAGIPPPPPLPGAGIPPPP--PLPGAGIPPPPP 1079
Score = 68.9 bits (167), Expect = 3e-11
Identities = 51/156 (32%), Positives = 61/156 (39%), Gaps = 23/156 (14%)
Query: 992 PPPALP----PGSQPIPPTGAAGPPAVHGLAVAPASVVPAPAGSGAPPGSLGPSEQIGQA 1047
PPP LP P P+P G PP + G + P +P G+G PP P I
Sbjct: 999 PPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLP---GAGIPPPPPLPGAGIPPP 1055
Query: 1048 GSTAGPQQQQPAGAPQPGAVPP------GVPPPGP------HGPSPFPNQQTPPSMMPGA 1095
G P P G PP G+PPP P P P P PP P
Sbjct: 1056 PPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGVGIPP---PPP 1112
Query: 1096 VPGSGHPGVAD-PGTPLPPDPTAPSPGTVTPVPPPQ 1130
+PG+G P PG +PP P P G P P P+
Sbjct: 1113 LPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPR 1148
Score = 68.2 bits (165), Expect = 4e-11
Identities = 54/155 (34%), Positives = 63/155 (40%), Gaps = 25/155 (16%)
Query: 992 PPPALPPGS-QPIPPTGAAG---PPAVHGLAVAPASVVPAPAGSGAPPGSLGPSEQIGQA 1047
PPP LP + P PP AG PP + G + P +P G+G PP P I
Sbjct: 944 PPPPLPGAAIPPPPPLPGAGIPLPPPLPGAGIPPPPPLP---GAGIPPPPPLPGAGIPPP 1000
Query: 1048 GSTAGPQQQQPAGAPQPGAVPP------GVPPPGP------HGPSPFPNQQTPPSMMPGA 1095
G P P G PP G+PPP P P P P PP P
Sbjct: 1001 PPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPP---PPP 1057
Query: 1096 VPGSGHPGVAD-PGTPLPPDPTAPSPGTVTPVPPP 1129
+PG+G P PG +PP P P PG P PPP
Sbjct: 1058 LPGAGIPPPPPLPGAGIPPPP--PLPGAGIPPPPP 1090
Score = 68.2 bits (165), Expect = 4e-11
Identities = 53/154 (34%), Positives = 61/154 (39%), Gaps = 24/154 (15%)
Query: 992 PPPALPPGSQPIPPTGAAG---PPAVHGLAVAPASVVPAPAGSGAPPGSLGPSEQIGQAG 1048
PPP G P PP AG PP + G + P +P G+G PP P I
Sbjct: 967 PPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLP---GAGIPPPPPLPGAGIPPPP 1023
Query: 1049 STAGPQQQQPAGAPQPGAVPP------GVPPPGP------HGPSPFPNQQTPPSMMPGAV 1096
G P P G PP G+PPP P P P P PP P +
Sbjct: 1024 PLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPP---PPPL 1080
Query: 1097 PGSGHPGVAD-PGTPLPPDPTAPSPGTVTPVPPP 1129
PG+G P PG +PP P P PG P PPP
Sbjct: 1081 PGAGIPPPPPLPGAGIPPPP--PLPGVGIPPPPP 1112
Score = 67.8 bits (164), Expect = 6e-11
Identities = 58/163 (35%), Positives = 67/163 (41%), Gaps = 30/163 (18%)
Query: 992 PPPALP-PGSQPIPPTGAAG---PPAVHGLAVAP------ASVVPAP--AGSGAPPGSLG 1039
PPP LP G P PP AG PP + G + P A + P P G+G PP
Sbjct: 1032 PPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPL 1091
Query: 1040 PSEQIGQAGSTAG-----PQQQQPAGAPQPGAVP-PGVPPPGP------HGPSPFPNQQT 1087
P I G P AG P P +P G+PPP P P P P
Sbjct: 1092 PGAGIPPPPPLPGVGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPRVGI 1151
Query: 1088 PPSMMPGAVPGSGHPGVAD-PGTPLPPDPTAPSPGTVTPVPPP 1129
PP P +PG+G P PG +PP P P PG P PPP
Sbjct: 1152 PP---PPPLPGAGIPPPPPLPGAGIPPPP--PLPGVGIPPPPP 1189
Score = 65.5 bits (158), Expect = 3e-10
Identities = 57/165 (34%), Positives = 67/165 (40%), Gaps = 34/165 (20%)
Query: 992 PPPALP-PGSQPIPPTGAAG--------------PPAVHGLAVAPASVVPAPAGSGAPP- 1035
PPP LP G P PP AG PP + G A+ P +P AG PP
Sbjct: 911 PPPPLPGAGIPPPPPLPGAGILPLPPLPGAGIPPPPPLPGAAIPPPPPLPG-AGIPLPPP 969
Query: 1036 ---GSLGPSEQIGQAGSTAGPQQQQPAGAPQPGAVP-PGVPPPGP------HGPSPFPNQ 1085
+ P + AG P AG P P +P G+PPP P P P P
Sbjct: 970 LPGAGIPPPPPLPGAG-IPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGA 1028
Query: 1086 QTPPSMMPGAVPGSGHPGVAD-PGTPLPPDPTAPSPGTVTPVPPP 1129
PP P +PG+G P PG +PP P P PG P PPP
Sbjct: 1029 GIPP---PPPLPGAGIPPPPPLPGAGIPPPP--PLPGAGIPPPPP 1068
Score = 63.5 bits (153), Expect = 1e-09
Identities = 51/150 (34%), Positives = 60/150 (40%), Gaps = 35/150 (23%)
Query: 992 PPPALP-PGSQPIPPTGAAG---PPAVHGLAVAPASVVPAPAGSGAPPGSLGPSEQIGQA 1047
PPP LP G P PP AG PP + G + P +P G PP
Sbjct: 1109 PPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPR---VGIPP------------ 1153
Query: 1048 GSTAGPQQQQPAGAPQPGAVP-PGVPPPGP------HGPSPFPNQQTPPSMMPGAVPGSG 1100
P AG P P +P G+PPP P P P P PP P +PG+G
Sbjct: 1154 -----PPPLPGAGIPPPPPLPGAGIPPPPPLPGVGIPPPPPLPGVGIPP---PPPLPGAG 1205
Query: 1101 HPGVAD-PGTPLPPDPTAPSPGTVTPVPPP 1129
P PG +PP P P P T +PPP
Sbjct: 1206 IPPPPPLPGMGIPPAPAPPLPPPGTGIPPP 1235
Score = 60.8 bits (146), Expect = 7e-09
Identities = 43/136 (31%), Positives = 56/136 (41%), Gaps = 30/136 (22%)
Query: 992 PPPALP----PGSQPIPPTGAAGPPAVHGLAVAPASVVPAPAGSGAPPGSLGPSEQIGQA 1047
PPP LP P P+P G PP + G + P +P G+G PP
Sbjct: 1131 PPPPLPGAGIPPPPPLPRVGIPPPPPLPGAGIPPPPPLP---GAGIPP------------ 1175
Query: 1048 GSTAGPQQQQPAGAPQPGAVP-PGVPPPGPHGPSPFPNQQTPPSMMPG-AVPGSGHPGVA 1105
P G P P +P G+PPP P + P PP +PG +P + P +
Sbjct: 1176 -----PPPLPGVGIPPPPPLPGVGIPPPPPLPGAGIP----PPPPLPGMGIPPAPAPPLP 1226
Query: 1106 DPGTPLPPDPTAPSPG 1121
PGT +PP P P G
Sbjct: 1227 PPGTGIPPPPLLPVSG 1242
Score = 55.1 bits (131), Expect = 4e-07
Identities = 48/142 (33%), Positives = 57/142 (40%), Gaps = 21/142 (14%)
Query: 992 PPPALPP-GSQPIPPTGAAG---PPAVHGLAVAPASVVPAPAGSGAPPGSLGPSEQIGQA 1047
PPP LP G P PP AG PP + G + P +P G G PP P I
Sbjct: 1142 PPPPLPRVGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLP---GVGIPPPPPLPGVGI--- 1195
Query: 1048 GSTAGPQQQQPAGAPQPGAVPPGVPPPGPHGPSPFPNQQTPPSMMPGAVPGSGHPGVADP 1107
P AG P P +P PP P P P P PP P +P SG P +
Sbjct: 1196 ---PPPPPLPGAGIPPPPPLPGMGIPPAPAPPLPPPGTGIPP---PPLLPVSGPPLLPQV 1249
Query: 1108 GTPLPPDPTAPSPGTVTPVPPP 1129
G+ T P+P +PPP
Sbjct: 1250 GS-----STLPTPQVCGFLPPP 1266
Score = 49.7 bits (117), Expect = 2e-05
Identities = 86/361 (23%), Positives = 128/361 (35%), Gaps = 101/361 (27%)
Query: 844 SDGDPIVDPEKEKEPKEGQEEVLKEVVESEGERKTKVERDIGEGNLSTAAAAALAAAAVK 903
S G P P++E ++ + E V E+ +R V++++ + +K
Sbjct: 624 SMGPPSKPPDEEHRLEDAETESQSAVSETPQKRSDAVQKEVVD---------------MK 668
Query: 904 AKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREREALEYQRQQLLADRQ 963
++ A V ++ +++ L T++ +LE R + L+T + + LE + A
Sbjct: 669 SEGQATVIQQLEQTIEDL--RTKIAELE---RQYPALDTEVASGHQGLE---NGVTASGD 720
Query: 964 AFHMEQLKYAEMRARQQHFQQMHQQQQQPPP-----ALPP-----GSQPIPPTGAAGPPA 1013
+E L+ E R + Q P LPP G P PP +GP
Sbjct: 721 VC-LEALRLEEKEVRHHRILEAKSIQTSPTEEGGVLTLPPVDGLPGRPPCPPGAESGPQT 779
Query: 1014 VH----GLAVAPASV--------------VPAP-------AGSG----APPGSLGPSEQI 1044
L V+P + P P AG G PP S+ Q
Sbjct: 780 KFCSEISLIVSPRRISVQLDSHQPTQSISQPPPPPSLLWSAGQGQPGSQPPHSISTEFQT 839
Query: 1045 GQAGSTAG--------------PQQQQPAGAPQPGAVPPGVPP---------PGPHGPSP 1081
S + P + + P G VPP PP P P P
Sbjct: 840 SHEHSVSSAFKNSCNIPSPPPLPCTESSSSMPGLGMVPPPPPPLPGMTVPTLPSTAIPQP 899
Query: 1082 FPNQQT-----PPSMMPGA-------VPGSG-HPGVADPGTPLPPDPTAPSPGTVTPVPP 1128
P Q T PP +PGA +PG+G P PG +PP P P PG P PP
Sbjct: 900 PPLQGTEMLPPPPPPLPGAGIPPPPPLPGAGILPLPPLPGAGIPPPP--PLPGAAIPPPP 957
Query: 1129 P 1129
P
Sbjct: 958 P 958
Score = 46.6 bits (109), Expect = 1e-04
Identities = 52/170 (30%), Positives = 65/170 (38%), Gaps = 38/170 (22%)
Query: 989 QQQPPPAL-------PPGSQPIPPTGAAGPPAVHGLAVAPASVVPAPAGSGAPPGSLGPS 1041
Q PPP+L PGSQP P + + H +V+ S +PP P
Sbjct: 809 QPPPPPSLLWSAGQGQPGSQP-PHSISTEFQTSHEHSVS--SAFKNSCNIPSPP----PL 861
Query: 1042 EQIGQAGSTAGPQQQQPAGAPQPGAVPPGVP------PPG-------PHGPSPFPNQQ-T 1087
+ S G P P PG P +P PP P P P P
Sbjct: 862 PCTESSSSMPGLGMVPPPPPPLPGMTVPTLPSTAIPQPPPLQGTEMLPPPPPPLPGAGIP 921
Query: 1088 PPSMMPGA-------VPGSGHPGVAD-PGTPLPPDPTAPSPGTVTPVPPP 1129
PP +PGA +PG+G P PG +PP P P PG P+PPP
Sbjct: 922 PPPPLPGAGILPLPPLPGAGIPPPPPLPGAAIPPPP--PLPGAGIPLPPP 969
Score = 42.7 bits (99), Expect = 0.002
Identities = 41/162 (25%), Positives = 66/162 (40%), Gaps = 17/162 (10%)
Query: 954 QRQQLLAD-RQAFHMEQLKYAEMRARQQHFQQMHQQQQQPPPALPPGSQPIPPTGAAGPP 1012
+++ LL+D +QA ++Q +QQ Q+ QQQQ L +P P A P
Sbjct: 191 EQEDLLSDIQQAIRLQQ--------QQQQQLQLQLQQQQQQQQLQGAEEPAAPPTAVSPQ 242
Query: 1013 AVHGLAVAPASVVPAPAGSGAPPGSLGPSEQIGQAG---STAGPQQQQPAGAPQPGAVPP 1069
L + + P+ G+G PGS + + + + ++P P PG +P
Sbjct: 243 PGAFLGLDRFLLGPS-GGAGEAPGSPDTEQALSALSDLPESLAAEPREPQQPPSPGGLPV 301
Query: 1070 GVPPPGPHGPSPFPNQQTPPSMMPGAVPGSGHPGVADPGTPL 1111
P P+ P + PS P +G PG G P+
Sbjct: 302 S---EAPSLPAAQPAAKDSPSSTAFPFPEAG-PGEEAAGAPV 339
>gi|150170670 piccolo isoform 2 [Homo sapiens]
Length = 4935
Score = 70.1 bits (170), Expect = 1e-11
Identities = 60/174 (34%), Positives = 71/174 (40%), Gaps = 38/174 (21%)
Query: 990 QQP----PPALPPGSQ--PIPPTGAAGPPAVHGLAVAPASVVPAPAGSGAPPG------- 1036
QQP PP PPG+ P P G A PPA + P+S P P PPG
Sbjct: 344 QQPGTVKPPVQPPGTTKPPAQPLGPAKPPAQQTGSEKPSSEQPGPKALAQPPGVGKTPAQ 403
Query: 1037 ----SLGPSEQIGQAGSTAG-PQQQQPAGAPQPGAVPPGVPPPGP-----HGPSPFPNQQ 1086
+ P++Q+G A P Q PA AP P P P PG GP QQ
Sbjct: 404 QPGPAKPPTQQVGTPKPLAQQPGLQSPAKAPGPTKTPVQQPGPGKIPAQQAGPGKTSAQQ 463
Query: 1087 T----PPSMMPGAV------PGSGHPGVADPGTPLPPDPTAPSPGTVTPVPPPQ 1130
T PPS +PG PG P PG+ PP + PG+ PPPQ
Sbjct: 464 TGPTKPPSQLPGPAKPPPQQPGPAKPPPQQPGSAKPP---SQQPGSTK--PPPQ 512
Score = 64.3 bits (155), Expect = 6e-10
Identities = 46/144 (31%), Positives = 53/144 (36%), Gaps = 6/144 (4%)
Query: 990 QQPPPALPPGSQPIPPTGAAGPPAVHGLAVAPASV---VPAPAGSGAPPGSLGPSEQIGQ 1046
QQP PA PP Q P A P + A AP V P P GP + Q
Sbjct: 403 QQPGPAKPPTQQVGTPKPLAQQPGLQSPAKAPGPTKTPVQQPGPGKIPAQQAGPGKTSAQ 462
Query: 1047 AGSTAGPQQQQPAGAPQPGAVP-PGVPPPGPHGPSPFPNQQTPPSMMPGAVPGSGHPGVA 1105
P Q P A P P P PPP G + P+QQ + P PG P
Sbjct: 463 QTGPTKPPSQLPGPAKPPPQQPGPAKPPPQQPGSAKPPSQQPGSTKPPPQQPGPAKPSPQ 522
Query: 1106 DPGTPLPP--DPTAPSPGTVTPVP 1127
PG+ PP P + P P P
Sbjct: 523 QPGSTKPPSQQPGSAKPSAQQPSP 546
Score = 57.0 bits (136), Expect = 1e-07
Identities = 60/193 (31%), Positives = 71/193 (36%), Gaps = 46/193 (23%)
Query: 983 QQMHQQQQQPPPALPP--GSQPIPPTGAAGPPA--------------VHGLAVAPASVVP 1026
QQ + + QPP P G P T A P V G +V P+ P
Sbjct: 242 QQPEKIKSQPPGTGKPIQGPTQTPQTDHAKLPLQRDASRPQTKQADIVRGESVKPSLPSP 301
Query: 1027 APAGSGAPPGSLGPSEQIGQAGSTAGPQQQ--QPAG-----APQPGAVPPGVPPPG---- 1075
+ P P++Q G S GP + QP+G A QPG V P V PPG
Sbjct: 302 SKPPIQQPTPGKPPAQQPGHEKSQPGPAKPPAQPSGLTKPLAQQPGTVKPPVQPPGTTKP 361
Query: 1076 ---PHGPSPFPNQQT----PPSMMPGAV-----PGSGHPGVADPGTPLP-------PDPT 1116
P GP+ P QQT P S PG PG G PG P P P
Sbjct: 362 PAQPLGPAKPPAQQTGSEKPSSEQPGPKALAQPPGVGKTPAQQPGPAKPPTQQVGTPKPL 421
Query: 1117 APSPGTVTPVPPP 1129
A PG +P P
Sbjct: 422 AQQPGLQSPAKAP 434
Score = 53.5 bits (127), Expect = 1e-06
Identities = 49/139 (35%), Positives = 54/139 (38%), Gaps = 30/139 (21%)
Query: 990 QQPPPALPPGSQPIPPTGAAGPPAVHGLAVAPASVVPAPAGSGAPPGSLGPSEQIGQAGS 1049
QQP PA PP QP G+A PP+ P S P P PG PS Q Q GS
Sbjct: 482 QQPGPAKPPPQQP----GSAKPPSQQ-----PGSTKPPP----QQPGPAKPSPQ--QPGS 526
Query: 1050 TAGPQQQQPAGAPQPGAVPPGVPPPGPHGPSPFPNQQTPPSMMPGAVPGSGHPGVADPGT 1109
T P Q QPG+ P P P PS S P + GSG P P T
Sbjct: 527 TKPPSQ-------QPGSAKPSAQQPSPAKPS------AQQSTKPVSQTGSGKP--LQPPT 571
Query: 1110 PLPPDPTAPSPGTVTPVPP 1128
P PS G + P
Sbjct: 572 VSPSAKQPPSQGLPKTICP 590
Score = 38.1 bits (87), Expect = 0.048
Identities = 31/120 (25%), Positives = 44/120 (36%), Gaps = 17/120 (14%)
Query: 984 QMHQQQQQPPPALPPGSQP---IPPTGAAGPPAVHGLAVAPASVVPAPAGSGAPPGSLGP 1040
Q +++ PP ++P PPTG P + +P PA GP
Sbjct: 784 QSQAEEKTTPPLKTDSAKPSQSFPPTGEKVSPF-------DSKAIPRPASDSKIISHPGP 836
Query: 1041 S------EQIGQAGSTAGPQQQQPAGAPQPGAVPPGVPPPGPHGPSPFPNQQTP-PSMMP 1093
S +Q+ P++ Q +P+P A P P P GP P Q P P P
Sbjct: 837 SSESKGQKQVDPVQKKEEPKKAQTKMSPKPDAKPMPKGSPTPPGPRPTAGQTVPTPQQSP 896
Score = 35.8 bits (81), Expect = 0.24
Identities = 30/109 (27%), Positives = 38/109 (34%), Gaps = 22/109 (20%)
Query: 1021 PASVVPAPAGSGAPPGSLGPSEQIGQAGSTAGPQQQQPAGAPQPGAVPPGVPPPGPHGPS 1080
P+SV+ P E GQ P Q P+G+P ++P P P S
Sbjct: 2344 PSSVIALPMKEQLSTTYFTSGETFGQEK----PASQLPSGSPSVSSLP-AKPRPFFRSSS 2398
Query: 1081 PFPNQQTPPSMMPGAVPGSGHPGVADPGTPLPPDPTAPSPGTVTPVPPP 1129
+ Q PP P P PP P P P P+PPP
Sbjct: 2399 LDISAQPPP-----------------PPPPPPPPPPPPPPPPPPPLPPP 2430
Score = 35.4 bits (80), Expect = 0.31
Identities = 26/74 (35%), Positives = 36/74 (48%), Gaps = 7/74 (9%)
Query: 1021 PASVVPAPAGSGAPPGSLGPSEQIGQAGSTAGPQQQQPAGAPQPGAVPPGVPPPGPHGPS 1080
PAS +P SG+P S P++ S++ QP P P PP PPP P P
Sbjct: 2372 PASQLP----SGSPSVSSLPAKPRPFFRSSSLDISAQPPPPPPPPPPPP--PPPPPPPPP 2425
Query: 1081 PFPNQQTP-PSMMP 1093
P P +P P+++P
Sbjct: 2426 PLPPPTSPKPTILP 2439
Score = 33.1 bits (74), Expect = 1.5
Identities = 33/139 (23%), Positives = 48/139 (34%), Gaps = 18/139 (12%)
Query: 991 QPPPALPPGSQPIPPTGAAGPPAVHGLAVAPASVVPAPAGSGAPPGSLGPS--EQIGQAG 1048
QPPP PP P PP PP + +++P + A P + + +
Sbjct: 2404 QPPPPPPPPPPPPPPPPPPPPPPLPPPTSPKPTILPKKKLTVASPVTTATPLFDAVTTLE 2463
Query: 1049 STAGPQQQQPAGAPQPGAVPPGVPPPGPHGPSPFPNQQTPPSMMPGAVPGSGHPGVADPG 1108
+TA + PP VPP PS +P + + P + P
Sbjct: 2464 TTAVLRSNGLPVTRICTTAPPPVPP--------------KPSSIPSGLVFTHRPEPSKP- 2508
Query: 1109 TPLPPDPTAPSPGTVTPVP 1127
P+ P P P T T P
Sbjct: 2509 -PIAPKPVIPQLPTTTQKP 2526
Score = 32.3 bits (72), Expect = 2.6
Identities = 35/163 (21%), Positives = 63/163 (38%), Gaps = 22/163 (13%)
Query: 717 PRVASAAAKSALEEFSKMKEEVPTALVEAHVRKVEEAAKVTGKADPAFGLESSGIAG--- 773
P S E+ + E + + E +++ +E K T K D + SS
Sbjct: 1438 PHEVSPEQPKDQEKTQSLSETLEITISEEEIKESQEERKDTFKKDSQQDIPSSKDHKEKS 1497
Query: 774 ------TTSDEP-ERIEESGNDE----------ARVEGQATDEKKEPKEPREGGGAIEEE 816
TT EP + +EES E V ++DE K+ E +G G E+
Sbjct: 1498 EFVDDITTRREPYDSVEESSESENSPVPQRKRRTSVGSSSSDEYKQ--EDSQGSGEEEDF 1555
Query: 817 AKEKTSEAPKKDEEKGKEGDSEKESEKSDGDPIVDPEKEKEPK 859
+++ E ++ G E D ++ + + +K++E K
Sbjct: 1556 IRKQIIEMSADEDASGSEDDEFIRNQLKEISSSTESQKKEETK 1598
Score = 32.0 bits (71), Expect = 3.4
Identities = 32/114 (28%), Positives = 42/114 (36%), Gaps = 18/114 (15%)
Query: 1017 LAVAPASVVP----APAGSGAPPGSLGPSEQIGQAGSTAGPQQQQPAGAPQPGAVPPGVP 1072
LA P+S P AP + + P Q A P+Q + AP+P PP V
Sbjct: 650 LAPVPSSPQPKLKTAPVTTTSAVSKSSPQPQQTSPKKDAAPKQDL-SKAPEPKKPPPLVK 708
Query: 1073 PPGPHGPSPFPNQQTPPSMMPGAVPGSGHPGVADPGTPLPPDPTAPSPGTVTPV 1126
P HG SP + PP + P P +P+ PS PV
Sbjct: 709 QPTLHG-SPSAKAKQPPEADSLSKPAP------------PKEPSVPSEQDKAPV 749
>gi|150378539 piccolo isoform 1 [Homo sapiens]
Length = 5142
Score = 70.1 bits (170), Expect = 1e-11
Identities = 60/174 (34%), Positives = 71/174 (40%), Gaps = 38/174 (21%)
Query: 990 QQP----PPALPPGSQ--PIPPTGAAGPPAVHGLAVAPASVVPAPAGSGAPPG------- 1036
QQP PP PPG+ P P G A PPA + P+S P P PPG
Sbjct: 344 QQPGTVKPPVQPPGTTKPPAQPLGPAKPPAQQTGSEKPSSEQPGPKALAQPPGVGKTPAQ 403
Query: 1037 ----SLGPSEQIGQAGSTAG-PQQQQPAGAPQPGAVPPGVPPPGP-----HGPSPFPNQQ 1086
+ P++Q+G A P Q PA AP P P P PG GP QQ
Sbjct: 404 QPGPAKPPTQQVGTPKPLAQQPGLQSPAKAPGPTKTPVQQPGPGKIPAQQAGPGKTSAQQ 463
Query: 1087 T----PPSMMPGAV------PGSGHPGVADPGTPLPPDPTAPSPGTVTPVPPPQ 1130
T PPS +PG PG P PG+ PP + PG+ PPPQ
Sbjct: 464 TGPTKPPSQLPGPAKPPPQQPGPAKPPPQQPGSAKPP---SQQPGSTK--PPPQ 512
Score = 64.3 bits (155), Expect = 6e-10
Identities = 46/144 (31%), Positives = 53/144 (36%), Gaps = 6/144 (4%)
Query: 990 QQPPPALPPGSQPIPPTGAAGPPAVHGLAVAPASV---VPAPAGSGAPPGSLGPSEQIGQ 1046
QQP PA PP Q P A P + A AP V P P GP + Q
Sbjct: 403 QQPGPAKPPTQQVGTPKPLAQQPGLQSPAKAPGPTKTPVQQPGPGKIPAQQAGPGKTSAQ 462
Query: 1047 AGSTAGPQQQQPAGAPQPGAVP-PGVPPPGPHGPSPFPNQQTPPSMMPGAVPGSGHPGVA 1105
P Q P A P P P PPP G + P+QQ + P PG P
Sbjct: 463 QTGPTKPPSQLPGPAKPPPQQPGPAKPPPQQPGSAKPPSQQPGSTKPPPQQPGPAKPSPQ 522
Query: 1106 DPGTPLPP--DPTAPSPGTVTPVP 1127
PG+ PP P + P P P
Sbjct: 523 QPGSTKPPSQQPGSAKPSAQQPSP 546
Score = 57.0 bits (136), Expect = 1e-07
Identities = 60/193 (31%), Positives = 71/193 (36%), Gaps = 46/193 (23%)
Query: 983 QQMHQQQQQPPPALPP--GSQPIPPTGAAGPPA--------------VHGLAVAPASVVP 1026
QQ + + QPP P G P T A P V G +V P+ P
Sbjct: 242 QQPEKIKSQPPGTGKPIQGPTQTPQTDHAKLPLQRDASRPQTKQADIVRGESVKPSLPSP 301
Query: 1027 APAGSGAPPGSLGPSEQIGQAGSTAGPQQQ--QPAG-----APQPGAVPPGVPPPG---- 1075
+ P P++Q G S GP + QP+G A QPG V P V PPG
Sbjct: 302 SKPPIQQPTPGKPPAQQPGHEKSQPGPAKPPAQPSGLTKPLAQQPGTVKPPVQPPGTTKP 361
Query: 1076 ---PHGPSPFPNQQT----PPSMMPGAV-----PGSGHPGVADPGTPLP-------PDPT 1116
P GP+ P QQT P S PG PG G PG P P P
Sbjct: 362 PAQPLGPAKPPAQQTGSEKPSSEQPGPKALAQPPGVGKTPAQQPGPAKPPTQQVGTPKPL 421
Query: 1117 APSPGTVTPVPPP 1129
A PG +P P
Sbjct: 422 AQQPGLQSPAKAP 434
Score = 53.5 bits (127), Expect = 1e-06
Identities = 49/139 (35%), Positives = 54/139 (38%), Gaps = 30/139 (21%)
Query: 990 QQPPPALPPGSQPIPPTGAAGPPAVHGLAVAPASVVPAPAGSGAPPGSLGPSEQIGQAGS 1049
QQP PA PP QP G+A PP+ P S P P PG PS Q Q GS
Sbjct: 482 QQPGPAKPPPQQP----GSAKPPSQQ-----PGSTKPPP----QQPGPAKPSPQ--QPGS 526
Query: 1050 TAGPQQQQPAGAPQPGAVPPGVPPPGPHGPSPFPNQQTPPSMMPGAVPGSGHPGVADPGT 1109
T P Q QPG+ P P P PS S P + GSG P P T
Sbjct: 527 TKPPSQ-------QPGSAKPSAQQPSPAKPS------AQQSTKPVSQTGSGKP--LQPPT 571
Query: 1110 PLPPDPTAPSPGTVTPVPP 1128
P PS G + P
Sbjct: 572 VSPSAKQPPSQGLPKTICP 590
Score = 38.1 bits (87), Expect = 0.048
Identities = 31/120 (25%), Positives = 44/120 (36%), Gaps = 17/120 (14%)
Query: 984 QMHQQQQQPPPALPPGSQP---IPPTGAAGPPAVHGLAVAPASVVPAPAGSGAPPGSLGP 1040
Q +++ PP ++P PPTG P + +P PA GP
Sbjct: 784 QSQAEEKTTPPLKTDSAKPSQSFPPTGEKVSPF-------DSKAIPRPASDSKIISHPGP 836
Query: 1041 S------EQIGQAGSTAGPQQQQPAGAPQPGAVPPGVPPPGPHGPSPFPNQQTP-PSMMP 1093
S +Q+ P++ Q +P+P A P P P GP P Q P P P
Sbjct: 837 SSESKGQKQVDPVQKKEEPKKAQTKMSPKPDAKPMPKGSPTPPGPRPTAGQTVPTPQQSP 896
Score = 35.8 bits (81), Expect = 0.24
Identities = 30/109 (27%), Positives = 38/109 (34%), Gaps = 22/109 (20%)
Query: 1021 PASVVPAPAGSGAPPGSLGPSEQIGQAGSTAGPQQQQPAGAPQPGAVPPGVPPPGPHGPS 1080
P+SV+ P E GQ P Q P+G+P ++P P P S
Sbjct: 2344 PSSVIALPMKEQLSTTYFTSGETFGQEK----PASQLPSGSPSVSSLP-AKPRPFFRSSS 2398
Query: 1081 PFPNQQTPPSMMPGAVPGSGHPGVADPGTPLPPDPTAPSPGTVTPVPPP 1129
+ Q PP P P PP P P P P+PPP
Sbjct: 2399 LDISAQPPP-----------------PPPPPPPPPPPPPPPPPPPLPPP 2430
Score = 35.4 bits (80), Expect = 0.31
Identities = 26/74 (35%), Positives = 36/74 (48%), Gaps = 7/74 (9%)
Query: 1021 PASVVPAPAGSGAPPGSLGPSEQIGQAGSTAGPQQQQPAGAPQPGAVPPGVPPPGPHGPS 1080
PAS +P SG+P S P++ S++ QP P P PP PPP P P
Sbjct: 2372 PASQLP----SGSPSVSSLPAKPRPFFRSSSLDISAQPPPPPPPPPPPP--PPPPPPPPP 2425
Query: 1081 PFPNQQTP-PSMMP 1093
P P +P P+++P
Sbjct: 2426 PLPPPTSPKPTILP 2439
Score = 33.1 bits (74), Expect = 1.5
Identities = 33/139 (23%), Positives = 48/139 (34%), Gaps = 18/139 (12%)
Query: 991 QPPPALPPGSQPIPPTGAAGPPAVHGLAVAPASVVPAPAGSGAPPGSLGPS--EQIGQAG 1048
QPPP PP P PP PP + +++P + A P + + +
Sbjct: 2404 QPPPPPPPPPPPPPPPPPPPPPPLPPPTSPKPTILPKKKLTVASPVTTATPLFDAVTTLE 2463
Query: 1049 STAGPQQQQPAGAPQPGAVPPGVPPPGPHGPSPFPNQQTPPSMMPGAVPGSGHPGVADPG 1108
+TA + PP VPP PS +P + + P + P
Sbjct: 2464 TTAVLRSNGLPVTRICTTAPPPVPP--------------KPSSIPSGLVFTHRPEPSKP- 2508
Query: 1109 TPLPPDPTAPSPGTVTPVP 1127
P+ P P P T T P
Sbjct: 2509 -PIAPKPVIPQLPTTTQKP 2526
Score = 32.3 bits (72), Expect = 2.6
Identities = 35/163 (21%), Positives = 63/163 (38%), Gaps = 22/163 (13%)
Query: 717 PRVASAAAKSALEEFSKMKEEVPTALVEAHVRKVEEAAKVTGKADPAFGLESSGIAG--- 773
P S E+ + E + + E +++ +E K T K D + SS
Sbjct: 1438 PHEVSPEQPKDQEKTQSLSETLEITISEEEIKESQEERKDTFKKDSQQDIPSSKDHKEKS 1497
Query: 774 ------TTSDEP-ERIEESGNDE----------ARVEGQATDEKKEPKEPREGGGAIEEE 816
TT EP + +EES E V ++DE K+ E +G G E+
Sbjct: 1498 EFVDDITTRREPYDSVEESSESENSPVPQRKRRTSVGSSSSDEYKQ--EDSQGSGEEEDF 1555
Query: 817 AKEKTSEAPKKDEEKGKEGDSEKESEKSDGDPIVDPEKEKEPK 859
+++ E ++ G E D ++ + + +K++E K
Sbjct: 1556 IRKQIIEMSADEDASGSEDDEFIRNQLKEISSSTESQKKEETK 1598
Score = 32.0 bits (71), Expect = 3.4
Identities = 32/114 (28%), Positives = 42/114 (36%), Gaps = 18/114 (15%)
Query: 1017 LAVAPASVVP----APAGSGAPPGSLGPSEQIGQAGSTAGPQQQQPAGAPQPGAVPPGVP 1072
LA P+S P AP + + P Q A P+Q + AP+P PP V
Sbjct: 650 LAPVPSSPQPKLKTAPVTTTSAVSKSSPQPQQTSPKKDAAPKQDL-SKAPEPKKPPPLVK 708
Query: 1073 PPGPHGPSPFPNQQTPPSMMPGAVPGSGHPGVADPGTPLPPDPTAPSPGTVTPV 1126
P HG SP + PP + P P +P+ PS PV
Sbjct: 709 QPTLHG-SPSAKAKQPPEADSLSKPAP------------PKEPSVPSEQDKAPV 749
>gi|162329583 cleavage and polyadenylation specific factor 6, 68 kD
subunit [Homo sapiens]
Length = 551
Score = 69.3 bits (168), Expect = 2e-11
Identities = 52/156 (33%), Positives = 60/156 (38%), Gaps = 19/156 (12%)
Query: 992 PPPALPPG-SQPIPPTGAAGPPAVHGLAVAPASVVPAPA------GSGAPPGSLGPSEQI 1044
PPP P G + P PP G GPP G P V+P P G PP L P +
Sbjct: 226 PPPPFPAGQTPPRPPLGPPGPPGPPG-PPPPGQVLPPPLAGPPNRGDRPPPPVLFPGQPF 284
Query: 1045 GQ---AGSTAGPQQQQPAGAPQPGAVPP--------GVPPPGPHGPSPFPNQQTPPSMMP 1093
GQ GP P P PG PP G PP P GP P PP +P
Sbjct: 285 GQPPLGPLPPGPPPPVPGYGPPPGPPPPQQGPPPPPGPFPPRPPGPLGPPLTLAPPPHLP 344
Query: 1094 GAVPGSGHPGVADPGTPLPPDPTAPSPGTVTPVPPP 1129
G PG+ P PP + P + + PPP
Sbjct: 345 GPPPGAPPPAPHVNPAFFPPPTNSGMPTSDSRGPPP 380
Score = 68.6 bits (166), Expect = 3e-11
Identities = 53/152 (34%), Positives = 60/152 (39%), Gaps = 19/152 (12%)
Query: 993 PPALPPGSQPIPPTGAAGPPAVHGLAVAPASVVPAPAGSGAPPGSLGPSEQIGQAGSTAG 1052
P A+P G + P G GPP P P G PPG P + + AG
Sbjct: 208 PGAVPGGDRFPGPAGPGGPPPPFPAGQTPPRPPLGPPGPPGPPGPPPPGQVL--PPPLAG 265
Query: 1053 PQQQ------------QPAGAPQPGAVPPGVPPPGP-HG--PSPFPNQQTPPSMMPGAVP 1097
P + QP G P G +PPG PPP P +G P P P QQ PP PG P
Sbjct: 266 PPNRGDRPPPPVLFPGQPFGQPPLGPLPPGPPPPVPGYGPPPGPPPPQQGPPP-PPGPFP 324
Query: 1098 GSGHPGVADPGTPLPPDPTAPSPGTVTPVPPP 1129
PG P L P P P P P P P
Sbjct: 325 -PRPPGPLGPPLTLAPPPHLPGPPPGAPPPAP 355
Score = 63.9 bits (154), Expect = 8e-10
Identities = 50/137 (36%), Positives = 56/137 (40%), Gaps = 20/137 (14%)
Query: 1007 GAAGPPAVHGLAVAPASVVPAPAGSGAPPGSLGPSEQIGQAGSTAGPQQQQPAGA--PQP 1064
G AGPP A P G G PG++ ++ GP PAG P+P
Sbjct: 184 GKAGPPGGSSRAAFPQG----GRGRGRFPGAVPGGDRFPGPAGPGGPPPPFPAGQTPPRP 239
Query: 1065 GAVPPGVPPPGPHGPSPFPNQQTPPSMM---------PGAVPGSGHPGVADPGTPLPPDP 1115
PPG PPGP GP P P Q PP + P V G P P PLPP P
Sbjct: 240 PLGPPG--PPGPPGPPP-PGQVLPPPLAGPPNRGDRPPPPVLFPGQPFGQPPLGPLPPGP 296
Query: 1116 TAPSPGTVTP--VPPPQ 1130
P PG P PPPQ
Sbjct: 297 PPPVPGYGPPPGPPPPQ 313
Score = 48.9 bits (115), Expect = 3e-05
Identities = 43/126 (34%), Positives = 47/126 (37%), Gaps = 33/126 (26%)
Query: 992 PPPALPP-GSQPIPPTGAAGPPAVHGLAVAPASVVPAPAGSGAPPGSLGPSEQIGQAGST 1050
PPP +P G P PP GPP P P P G PP +L P
Sbjct: 296 PPPPVPGYGPPPGPPPPQQGPPP------PPGPFPPRPPGPLGPPLTLAP---------- 339
Query: 1051 AGPQQQQPAGAPQPGAVPPGVPPPGPH-GPSPFPNQQTPPSMMPGAVPGSGHPGVADP-G 1108
P P P PPG PPP PH P+ FP PP+ S P DP G
Sbjct: 340 -------PPHLPGP---PPGAPPPAPHVNPAFFP----PPTNSGMPTSDSRGPPPTDPYG 385
Query: 1109 TPLPPD 1114
P P D
Sbjct: 386 RPPPYD 391
Score = 44.3 bits (103), Expect = 7e-04
Identities = 40/130 (30%), Positives = 45/130 (34%), Gaps = 17/130 (13%)
Query: 992 PPPALPPGSQ----PIPPTGAAGPPAVHGLAVAPASVVPA-----PAGS--GAPPGSLGP 1040
PPP L PG P+ P PP V G P P P G PPG LGP
Sbjct: 274 PPPVLFPGQPFGQPPLGPLPPGPPPPVPGYGPPPGPPPPQQGPPPPPGPFPPRPPGPLGP 333
Query: 1041 SEQIGQAGSTAGPQQQQPAGAPQPG--AVPPGVPPPGPHGPSPFPNQQTPPSMMPGAVPG 1098
+ GP P GAP P P PPP G ++ PP+ G P
Sbjct: 334 PLTLAPPPHLPGP----PPGAPPPAPHVNPAFFPPPTNSGMPTSDSRGPPPTDPYGRPPP 389
Query: 1099 SGHPGVADPG 1108
PG
Sbjct: 390 YDRGDYGPPG 399
Score = 39.3 bits (90), Expect = 0.021
Identities = 32/92 (34%), Positives = 36/92 (39%), Gaps = 19/92 (20%)
Query: 1041 SEQIGQAGSTAGPQQQQPAGAPQPGAVPPGVPPPGPHGPSPFPNQQTPPSMMPGAVPGSG 1100
S + Q+G +G + P G A P G G F PGAVPG
Sbjct: 171 SRKTTQSGQMSGEGKAGPPGGSSRAAFPQG-----GRGRGRF----------PGAVPGGD 215
Query: 1101 H-PGVADPGTPLPPDP---TAPSPGTVTPVPP 1128
PG A PG P PP P T P P P PP
Sbjct: 216 RFPGPAGPGGPPPPFPAGQTPPRPPLGPPGPP 247
>gi|116256453 nuclear receptor co-repressor 2 isoform 1 [Homo sapiens]
Length = 2524
Score = 69.3 bits (168), Expect = 2e-11
Identities = 78/357 (21%), Positives = 136/357 (38%), Gaps = 34/357 (9%)
Query: 786 GNDEARVEGQATDEKKEPKEPREGGGAIEEEAKEKTSEAPKKDEEKGKEGDSEKESEKSD 845
G + + + Q ++++ ++P E++ KEK EA K++E+ E D E ++
Sbjct: 491 GKSQQQQQQQQQQQQQQQQQPMPRSSQEEKDEKEKEKEAEKEEEKPEVENDKEDLLKEKT 550
Query: 846 GDPIVDPEKEKEPKEGQEEVLKEVVESEGERKTKVERDIGEGNLSTAAAAALAAAAVKAK 905
D + EKE + ++ S+G RK ++ R +++ A + A ++
Sbjct: 551 DDTSGEDNDEKEAVASKG---RKTANSQGRRKGRITR-----SMANEANSEEAITPQQSA 602
Query: 906 HLAAVEERKIKSLVALLVETQMKKLEIKLRHFEEL------ETIMDREREALEYQRQQLL 959
LA++E + +ET K L R++ + +T+ + Y+++Q L
Sbjct: 603 ELASMELNESSRWTEEEMETAKKGLLEHGRNWSAIARMVGSKTVSQCKNFYFNYKKRQNL 662
Query: 960 AD-RQAFHMEQLKYAEMRARQQHFQQMHQQQQQPPPALPPGSQPIPPTGAAGPPAVHGLA 1018
+ Q ++ K R +++ ++ PP + V
Sbjct: 663 DEILQQHKLKMEKERNARRKKKKAPAAASEEAAFPPVVEDEEMEASGVSGNEEEMVEEAE 722
Query: 1019 VAPASVVPAPAGSGAPPGSLGPSEQIGQAGSTAGPQQQQPAGAPQPGAVPPGV-----PP 1073
AS P G + P ++ S S P + Q G PP PP
Sbjct: 723 ALHASGNEVPRGECSGPATVNNS---SDTESIPSPHTEAAKDTGQNGPKPPATLGADGPP 779
Query: 1074 PGPHGPSPFPNQQTPPSMMPGAVPGSGHPGVADPGTPLPPDPTAPSPGTVTPVPPPQ 1130
PGP P+P PP +P P P G P PP P PSP PV P +
Sbjct: 780 PGP--PTP------PPEDIP--APTEPTPASEATGAPTPP-PAPPSPSAPPPVVPKE 825
Score = 62.8 bits (151), Expect = 2e-09
Identities = 130/633 (20%), Positives = 216/633 (34%), Gaps = 76/633 (12%)
Query: 545 QPKTPQGRQVDADTKAGRKGKELDDLVPETAKGKPEL----------------QTSASQQ 588
Q P+ Q + D K K E ++ PE K +L + AS+
Sbjct: 509 QQPMPRSSQEEKDEKEKEKEAEKEEEKPEVENDKEDLLKEKTDDTSGEDNDEKEAVASKG 568
Query: 589 MLNFPDKGKEK---PTDMQNFGLRTDMYTKKNVPSKSKAAASATREWTEQETLLLLEALE 645
+G+ K M N + T + + + + WTE+E + L
Sbjct: 569 RKTANSQGRRKGRITRSMANEANSEEAITPQQSAELASMELNESSRWTEEEMETAKKGLL 628
Query: 646 MYKDDWNKVSEHVGSRTQDEC---ILHFLRLPIEDPYLEDSEASLGPLAYQPIPFSQSGN 702
+ +W+ ++ VGS+T +C ++ + D L+ + + ++
Sbjct: 629 EHGRNWSAIARMVGSKTVSQCKNFYFNYKKRQNLDEILQQHKLKMEKERNARRKKKKAPA 688
Query: 703 PVMSTVAFLASVVDPRVASAAAKSALEEFSKMKEEVPTALVEAHVRKVEEAAKVTGKAD- 761
AF V D + ++ EE + E + + E + A V +D
Sbjct: 689 AASEEAAFPPVVEDEEMEASGVSGNEEEMVEEAEALHASGNEVPRGECSGPATVNNSSDT 748
Query: 762 ---PAFGLESSGIAGTTSDEPERIEESGNDEARVEGQATDEKKEPKEP---REGGGAIEE 815
P+ E++ G +P + ++ P EP E GA
Sbjct: 749 ESIPSPHTEAAKDTGQNGPKPPATLGADGPPPGPPTPPPEDIPAPTEPTPASEATGAPTP 808
Query: 816 EAKEKTSEAPKKDEEKGKEGDSEKESEKSDGDPIVDPEKEKEPKEGQEEVLKEVVESEGE 875
+ AP K EKE E + P+ + E++K P EE+ + ++E
Sbjct: 809 PPAPPSPSAPPPVVPK-----EEKEEETAAAPPVEEGEEQKPP--AAEELAVDTGKAEEP 861
Query: 876 RKTKVERDIGEG---NLSTAAAAALAAAAVKAKHLAAVEERKIKSLVALLVETQMKKLEI 932
K++ + EG AA A A A+KA+ R + + +
Sbjct: 862 VKSECTEEAEEGPAKGKDAEAAEATAEGALKAEKKEGGSGRATTAKSSGAPQDSDSSATC 921
Query: 933 KLRHFEELETIMDREREALEYQRQQLLAD-----RQAFHMEQLKYAEMRARQQHFQQMHQ 987
+E E ++ L R LL A + L +++ R +
Sbjct: 922 SADEVDEAE---GGDKNRLLSPRPSLLTPTGDPRANASPQKPLDLKQLKQRAAAIPPIVT 978
Query: 988 QQQQPPPALPPGSQPIPPTGAAGPPAVHGLAVAPASVVPAPAGSGAPPGSLGPSEQIGQA 1047
+ +PP ++P PP A PP + + P S P GS S P+
Sbjct: 979 KVHEPPREDAAPTKPAPP---APPPPQN---LQPESDAPQQPGSSPRGKSRSPA------ 1026
Query: 1048 GSTAGPQQQQPAGAPQPGAVP---PGVPPPGPHGPSPFPNQQTPPSMMPGAVPGSGHPGV 1104
A + ++P P A PG PP G PFP PP + A P + P
Sbjct: 1027 -PPADKEAEKPVFFPAFAAEAQKLPGDPPCWTSG-LPFP---VPPREVIKASPHAPDPSA 1081
Query: 1105 ---ADPGTPLP------PDPTAPSPGTVTPVPP 1128
A PG PLP P P P T++ PP
Sbjct: 1082 FSYAPPGHPLPLGLHDTARPVLPRPPTISNPPP 1114
Score = 31.6 bits (70), Expect = 4.4
Identities = 26/102 (25%), Positives = 37/102 (36%), Gaps = 3/102 (2%)
Query: 305 PSPTPEAKKKNAKKGPSTPYTKSKRGHREEEQEDLTKDMDEPSPVPNVEEVTLPKTVNTK 364
PSP EA K + GP P T G +D+ P+ E T T
Sbjct: 752 PSPHTEAAKDTGQNGPKPPATLGADGPPPGPPTPPPEDIPAPTEPTPASEATGAPTPPPA 811
Query: 365 KDSESAPVKGGTMTDLDEQEDESMETTGKDEDENSTGNKGEQ 406
S SAP + +E+E+E+ +E E E+
Sbjct: 812 PPSPSAP---PPVVPKEEKEEETAAAPPVEEGEEQKPPAAEE 850
>gi|148536848 carboxyl ester lipase precursor [Homo sapiens]
Length = 756
Score = 68.9 bits (167), Expect = 3e-11
Identities = 57/152 (37%), Positives = 65/152 (42%), Gaps = 23/152 (15%)
Query: 993 PPALPPGSQPIPPTGAAGPPAVHGLAVAPASVVPAPAGSGAPP----GSLG--PSEQIGQ 1046
PP G+ P+PPTG +G P V + A VP SGAPP G G P G
Sbjct: 586 PPTGDSGAPPVPPTGDSGAPPVPPTGDSGAPPVPPTGDSGAPPVPPTGDSGAPPVPPTGD 645
Query: 1047 AGSTAGPQQQQPAGAPQP----GAVPPGVPPPGPHGPSPFPNQQTPPSMMPGA--VPGSG 1100
+G+ P P P PP VPP G GP P PP+ GA VP +G
Sbjct: 646 SGAPPVPPTGDSGAPPVPPTGDSGAPP-VPPTGDAGPPP-----VPPTGDSGAPPVPPTG 699
Query: 1101 HPGVADPGTPLPPDPTAPSPGT----VTPVPP 1128
G A P TP TAP P T PVPP
Sbjct: 700 DSG-APPVTPTGDSETAPVPPTGDSGAPPVPP 730
Score = 53.9 bits (128), Expect = 8e-07
Identities = 45/147 (30%), Positives = 53/147 (36%), Gaps = 13/147 (8%)
Query: 993 PPALPPGSQPIPPTGAAGPPAVHGLAVAPASVVPAPAGSGAPP----GSLG--PSEQIGQ 1046
P + P+PPTG + V + + VP SGAPP G G P G
Sbjct: 553 PTVTDQEATPVPPTGDSEATPVPPTGDSETAPVPPTGDSGAPPVPPTGDSGAPPVPPTGD 612
Query: 1047 AGSTAGPQQQQPAGAPQPGAVPPGVPPPGPHGPSPFPNQQTPPSMMPGAVP-----GSGH 1101
+G+ P P P G PP P G S P PP+ GA P SG
Sbjct: 613 SGAPPVPPTGDSGAPPVPPTGDSGAPPVPPTGDSGAP--PVPPTGDSGAPPVPPTGDSGA 670
Query: 1102 PGVADPGTPLPPDPTAPSPGTVTPVPP 1128
P V G PP PVPP
Sbjct: 671 PPVPPTGDAGPPPVPPTGDSGAPPVPP 697
Score = 50.1 bits (118), Expect = 1e-05
Identities = 33/105 (31%), Positives = 42/105 (40%), Gaps = 14/105 (13%)
Query: 993 PPALPPGSQPIPPTGAAGPPAVHGLAVAPASVVPAPAGSGAPPGSLGPSEQIGQAGSTAG 1052
PP G+ P+PPTG AGPP V + A VP SGAPP + G
Sbjct: 663 PPTGDSGAPPVPPTGDAGPPPVPPTGDSGAPPVPPTGDSGAPP------------VTPTG 710
Query: 1053 PQQQQPAGAPQPGAVPPGVPPPGPHGPSPF-PNQQTPPSMMPGAV 1096
+ P PP VPP G +P P + + MP +
Sbjct: 711 DSETAPVPPTGDSGAPP-VPPTGDSEAAPVPPTDDSKEAQMPAVI 754
>gi|19718731 bromodomain-containing protein 4 isoform long [Homo
sapiens]
Length = 1362
Score = 68.6 bits (166), Expect = 3e-11
Identities = 104/457 (22%), Positives = 168/457 (36%), Gaps = 68/457 (14%)
Query: 731 FSKMKEEVPTALVEAHVRKVEEAAKVTG---KADPAFGLESSGIAGTTSDEPERIEE--- 784
F+KM +E +V V KV +D + S + T E ER +
Sbjct: 454 FAKMPDEPEEPVVAVSSPAVPPPTKVVAPPSSSDSSSDSSSDSDSSTDDSEEERAQRLAE 513
Query: 785 ---------------SGNDEARVEGQATDEKKEPKEPREGGGAIEEEAKEKTSEAPKKDE 829
S + + + + D+K++ KE + +EE K K E P K
Sbjct: 514 LQEQLKAVHEQLAALSQPQQNKPKKKEKDKKEKKKEKHKRKEEVEENKKSKAKEPPPKKT 573
Query: 830 EKGKEGDS-----EKESEKSDGDPIVDPEKEKEPK----EGQEEVLKEVVESEGERKTKV 880
+K +S E KS P + E+E + K E + ++ ++ + GE+ +V
Sbjct: 574 KKNNSSNSNVSKKEPAPMKSKPPPTYESEEEDKCKPMSYEEKRQLSLDINKLPGEKLGRV 633
Query: 881 ERDIG--EGNLSTAAAAALAAAAVKAKHLAAVE-ERKIKSLVALLVETQMKKLEI----- 932
I E +L + + K E ER + S + + Q +K+++
Sbjct: 634 VHIIQSREPSLKNSNPDEIEIDFETLKPSTLRELERYVTSCLRKKRKPQAEKVDVIAGSS 693
Query: 933 KLRHFEELETIMDREREALEYQRQQLLADRQAFHMEQLKYAEMRARQQHFQQMHQQQQQP 992
K++ F E+ E + + + ++ + + K R +++H HQQ QQ
Sbjct: 694 KMKGFSSSESESSSESSSSDSED----SETEMAPKSKKKGHPGREQKKHHHHHHQQMQQA 749
Query: 993 PPALPPGSQPIPPTGAAGPPAVHGLAVAPASVVP--------APAGSGAPPGSLGPSEQI 1044
P +P QP PP PP P P APA +PP + +
Sbjct: 750 PAPVP--QQPPPPPQQPPPPPPPQQQQQPPPPPPPPSMPQQAAPAMKSSPPPFIATQVPV 807
Query: 1045 ------GQAGSTAGPQQQQPAGAPQPGAVPPGVPPPGPHGPSPFPNQQ---TPPSMMPGA 1095
G G Q PQP +PP +P P H P NQ +PP++
Sbjct: 808 LEPQLPGSVFDPIGHFTQPILHLPQP-ELPPHLPQPPEHSTPPHLNQHAVVSPPALHNAL 866
Query: 1096 VPGSGHPGVADPGTPLPPDPTAP---SPG-TVTPVPP 1128
P ++ LPP P P SP T TP+ P
Sbjct: 867 PQQPSRP--SNRAAALPPKPARPPAVSPALTQTPLLP 901
Score = 48.5 bits (114), Expect = 4e-05
Identities = 91/418 (21%), Positives = 156/418 (37%), Gaps = 59/418 (14%)
Query: 735 KEEVPTALVEAHVRKVEEA-----AKVTGKAD-PAFGLESSGIAGTTSD-EPERIEESGN 787
K P V A RK+++ AK+ + + P + S + T P +S +
Sbjct: 431 KYNPPDHEVVAMARKLQDVFEMRFAKMPDEPEEPVVAVSSPAVPPPTKVVAPPSSSDSSS 490
Query: 788 DEARVEGQATDEKKEPKEPREGGGAIEEEAK---EKTSEAPKKDEEKGKEGDSEKESEKS 844
D + +TD+ +E + R ++E+ K E+ + + + K K+ + +K+ +K
Sbjct: 491 DSSSDSDSSTDDSEEERAQRLA--ELQEQLKAVHEQLAALSQPQQNKPKKKEKDKKEKKK 548
Query: 845 DGDPIVDPEKEKEPKEGQEEVLKEVVESEGERKTKVERDIGEGNLSTAAAAALAAAAVKA 904
EK K KE EE K + +KTK + N S + + A +K+
Sbjct: 549 --------EKHKR-KEEVEENKKSKAKEPPPKKTK------KNNSSNSNVSKKEPAPMKS 593
Query: 905 KHLAAVE-ERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREREALEYQRQQLLADRQ 963
K E E + K E + L+I E+L ++ ++ E + D
Sbjct: 594 KPPPTYESEEEDKCKPMSYEEKRQLSLDINKLPGEKLGRVV-HIIQSREPSLKNSNPDEI 652
Query: 964 AFHMEQLKYAEMRARQQHFQQMHQQQQQPPPALPPGSQPIPPTGAAGPPAVHGLAVAPAS 1023
E LK + +R +++ +++++P Q AG + G + + +
Sbjct: 653 EIDFETLKPSTLRELERYVTSCLRKKRKP--------QAEKVDVIAGSSKMKGFSSSESE 704
Query: 1024 VVPAPAGSGAPPGSLGPSEQIGQAGSTAGPQ-----------QQQPAGAPQPGAVPPGVP 1072
+ S + + + + G Q QQ PA PQ PP P
Sbjct: 705 SSSESSSSDSEDSETEMAPKSKKKGHPGREQKKHHHHHHQQMQQAPAPVPQQPPPPPQQP 764
Query: 1073 PPGPHGPSPFPNQQTPPSMMPGAVPGSGHPGVADPGTPLPPDPTAPSPGTVTPVPPPQ 1130
PP P P QQ PP P ++P P + PP P T PV PQ
Sbjct: 765 PPPP---PPQQQQQPPPPPPPPSMPQQAAPAMKSS----PP----PFIATQVPVLEPQ 811
Score = 46.2 bits (108), Expect = 2e-04
Identities = 48/176 (27%), Positives = 56/176 (31%), Gaps = 28/176 (15%)
Query: 981 HFQQ--MHQQQQQPPPALP-PGSQPIPPT----GAAGPPAVHGLAVAPASVVPAPAGSGA 1033
HF Q +H Q + PP LP P PP PPA+H A+ P+ +
Sbjct: 822 HFTQPILHLPQPELPPHLPQPPEHSTPPHLNQHAVVSPPALHN-ALPQQPSRPSNRAAAL 880
Query: 1034 PPGSLGP---SEQIGQAGSTAGPQQQQPAGAPQPGAVPPGVP-----------------P 1073
PP P S + Q P QP PP P P
Sbjct: 881 PPKPARPPAVSPALTQTPLLPQPPMAQPPQVLLEDEEPPAPPLTSMQMQLYLQQLQKVQP 940
Query: 1074 PGPHGPSPFPNQQTPPSMMPGAVPGSGHPGVADPGTPLPPDPTAPSPGTVTPVPPP 1129
P P PS Q PP + P P P P PP P P P P P
Sbjct: 941 PTPLLPSVKVQSQPPPPLPPPPHPSVQQQLQQQPPPPPPPQPQPPPQQQHQPPPRP 996
Score = 42.7 bits (99), Expect = 0.002
Identities = 44/159 (27%), Positives = 52/159 (32%), Gaps = 28/159 (17%)
Query: 992 PPPALPPGSQP-------IPPTGAAGPPAVHGLAVAPASVVPAPAGSGA----------- 1033
P PA PP P +P A PP V + PAP +
Sbjct: 882 PKPARPPAVSPALTQTPLLPQPPMAQPPQV----LLEDEEPPAPPLTSMQMQLYLQQLQK 937
Query: 1034 --PPGSLGPSEQIGQAGSTAGPQQQQPAGAPQPGAVPPGVPPPGPHGPSPFPNQQTPPSM 1091
PP L PS ++ P P+ Q PP PPP P P P QQ P
Sbjct: 938 VQPPTPLLPSVKVQSQPPPPLPPPPHPSVQQQLQQQPPPPPPPQPQPP---PQQQHQPPP 994
Query: 1092 MPGAV-PGSGHPGVADPGTPLPPDPTAPSPGTVTPVPPP 1129
P + P + P P P P PG P P P
Sbjct: 995 RPVHLQPMQFSTHIQQPPPPQGQQPPHPPPGQQPPPPQP 1033
Score = 39.7 bits (91), Expect = 0.016
Identities = 48/196 (24%), Positives = 73/196 (37%), Gaps = 38/196 (19%)
Query: 955 RQQLLADRQAFHMEQLKYAEMRARQQHFQQMHQQQQQPPPALPPGSQPIPPTGA------ 1008
+QQ + H++ ++++ H QQ Q Q PP PPG QP PP A
Sbjct: 987 QQQHQPPPRPVHLQPMQFST------HIQQPPPPQGQQPPHPPPGQQPPPPQPAKPQQVI 1040
Query: 1009 ----------AGPPAVHGLAVAPAS-VVPAPAGS--------GAPPGSLGPSEQIGQAGS 1049
+ P + L AP+ ++ +P S P ++ P +Q +A S
Sbjct: 1041 QHHHSPRHHKSDPYSTGHLREAPSPLMIHSPQMSQFQSLTHQSPPQQNVQPKKQELRAAS 1100
Query: 1050 TAGPQQQQPAGAPQPGAVPPGVPPPGPHGPS--PFPNQQTPPSMMPGAVPGSGHPGVADP 1107
P QP + + + P PS P P + P +P D
Sbjct: 1101 VVQP---QPLVVVKEEKIHSPIIRSEPFSPSLRPEPPKHPESIKAPVHLPQRPEMKPVDV 1157
Query: 1108 GTPL--PPDPTAPSPG 1121
G P+ PP+ AP PG
Sbjct: 1158 GRPVIRPPEQNAPPPG 1173
Score = 39.3 bits (90), Expect = 0.021
Identities = 43/146 (29%), Positives = 51/146 (34%), Gaps = 31/146 (21%)
Query: 1016 GLAVAPASVVPAPAGSGAPPGSLGPSEQIGQAGSTAGPQQ--------QQPAGA---PQP 1064
G A S VP + PP + P +T P Q P PQP
Sbjct: 187 GTAKPGVSTVPNTTQASTPPQTQTPQPNPPPVQATPHPFPAVTPDLIVQTPVMTVVPPQP 246
Query: 1065 GAVPPGVP--PPGPHGPSPFPNQQTPPSMMPGAVPGSGHPGV---ADPGTP--------- 1110
PP VP P P P+P P Q PP + P GV AD TP
Sbjct: 247 LQTPPPVPPQPQPPPAPAPQPVQSHPPIIAATPQPVKTKKGVKRKADTTTPTTIDPIHEP 306
Query: 1111 --LPPDPTAPSPG----TVTPVPPPQ 1130
LPP+P G + PV PP+
Sbjct: 307 PSLPPEPKTTKLGQRRESSRPVKPPK 332
Score = 38.5 bits (88), Expect = 0.036
Identities = 34/151 (22%), Positives = 65/151 (43%), Gaps = 18/151 (11%)
Query: 846 GDPIVDPEKEKEPKEGQEEVLKEVVESEGERKTKVERDIGEGNLSTAAAAA-----LAAA 900
G P++ P ++ P G + K+ + E + ++D+ N+ + A+ ++
Sbjct: 1158 GRPVIRPPEQNAPPPGAPD--KDKQKQEPKTPVAPKKDLKIKNMGSWASLVQKHPTTPSS 1215
Query: 901 AVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREREALEYQRQQLLA 960
K+ + + R+ A E + K L+ + H E +E+E L +R +
Sbjct: 1216 TAKSSSDSFEQFRR----AAREKEEREKALKAQAEHAE-------KEKERLRQERMRSRE 1264
Query: 961 DRQAFHMEQLKYAEMRARQQHFQQMHQQQQQ 991
D A + + E R RQ+ QQ Q+QQQ
Sbjct: 1265 DEDALEQARRAHEEARRRQEQQQQQRQEQQQ 1295
Score = 34.7 bits (78), Expect = 0.53
Identities = 41/147 (27%), Positives = 46/147 (31%), Gaps = 27/147 (18%)
Query: 984 QMHQQQQQPPPALPPGSQPIPPTGAAGPPAVHGLAVAPASVVPAPAGSGAPPGSLGPSEQ 1043
Q QQQ PPP PP QP P PP P L P +
Sbjct: 967 QQQLQQQPPPPP-PPQPQPPPQQQHQPPPR---------------------PVHLQPMQF 1004
Query: 1044 IGQAGSTAGPQQQQPAGAPQPGAVPPGVPPPGPHGPSPFPNQQTPPSMMPGAVPGSGHPG 1103
PQ QQP P PG P PPP P P P +GH
Sbjct: 1005 STHIQQPPPPQGQQPP-HPPPGQQP---PPPQPAKPQQVIQHHHSPRHHKSDPYSTGHLR 1060
Query: 1104 VADPGTPLPPDPTAPSPGTVTPVPPPQ 1130
A P + P ++T PPQ
Sbjct: 1061 EA-PSPLMIHSPQMSQFQSLTHQSPPQ 1086
Score = 30.8 bits (68), Expect = 7.6
Identities = 28/123 (22%), Positives = 48/123 (39%), Gaps = 10/123 (8%)
Query: 282 NSPDSDRRDKKGGNYKKRKRSPSPSPTPEAKKKNAKKGPSTPYTKSKRGHREEEQEDLTK 341
N P +DKK +K KR E KK AK+ P K+ + +++
Sbjct: 534 NKPKKKEKDKKEKKKEKHKRK---EEVEENKKSKAKEPPPKKTKKNNSSNSNVSKKEPAP 590
Query: 342 DMDEPSPVPNVEEVTLPKTVNTKK------DSESAP-VKGGTMTDLDEQEDESMETTGKD 394
+P P EE K ++ ++ D P K G + + + + S++ + D
Sbjct: 591 MKSKPPPTYESEEEDKCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPD 650
Query: 395 EDE 397
E E
Sbjct: 651 EIE 653
>gi|32895368 alpha 1 type VIII collagen precursor [Homo sapiens]
Length = 744
Score = 68.6 bits (166), Expect = 3e-11
Identities = 55/166 (33%), Positives = 62/166 (37%), Gaps = 30/166 (18%)
Query: 989 QQQPPPALPPGSQPIPPT----GAAGPPAVHGLA--VAPASVVPAPAGSGAP--PGSLGP 1040
Q P P PG Q P G GPP + GL + P G P PG LGP
Sbjct: 422 QGPPGPKGEPGLQGFPGKPGFLGEVGPPGMRGLPGPIGPKGEAGQKGVPGLPGVPGLLGP 481
Query: 1041 SEQIGQAGSTAGPQQQQPAGAPQPGAVPPGVPPPGPHGPSPFPNQQTPPSM--------- 1091
G+ G Q P G P G + PPG GP P PP
Sbjct: 482 K---GEPGIPGDQGLQGPPGIPGIGGPSGPIGPPGIPGPKGEPGLPGPPGFPGIGKPGVA 538
Query: 1092 -------MPGAVPGSGHPGVADPGTPLPPDPTAPSPGTVTPVPPPQ 1130
PGA+ G PG+ PG P PP P P P + P PPPQ
Sbjct: 539 GLHGPPGKPGALGPQGQPGL--PGPPGPPGPPGP-PAVMPPTPPPQ 581
Score = 53.1 bits (126), Expect = 1e-06
Identities = 44/142 (30%), Positives = 53/142 (37%), Gaps = 26/142 (18%)
Query: 991 QPPPALPPGSQPIP-PTGAAGPPAVHGLAVAPASVVPAPAGSGAPPGSLGPSEQIGQAGS 1049
QP P G + +P P G GP G + A V P G PPG +G +G+ G
Sbjct: 218 QPGPKGDRGPKGLPGPQGLRGPKGDKGFGMPGAPGVKGPPGMHGPPGPVG-LPGVGKPGV 276
Query: 1050 TAGPQQQQPAGAP----QPGAV----------PPGVPPPGPHGPSPFPNQQTPPSMM--- 1092
T P Q P G P +PG PPG+P G G P Q P
Sbjct: 277 TGFPGPQGPLGKPGAPGEPGPQGPIGVPGVQGPPGIPGIGKPGQDGIPGQPGFPGGKGEQ 336
Query: 1093 -------PGAVPGSGHPGVADP 1107
P +PG G PG P
Sbjct: 337 GLPGLPGPPGLPGIGKPGFPGP 358
Score = 52.0 bits (123), Expect = 3e-06
Identities = 50/161 (31%), Positives = 59/161 (36%), Gaps = 23/161 (14%)
Query: 991 QPPPALPPGSQPIPPTGAAGPPAVHGLAVAPASVVPAPAGSGAPPGSLG---PSEQIGQA 1047
+P P PPG +P G G G P P G PG++G +IGQ
Sbjct: 125 EPGPRGPPGPPGLPGHGIPGIKGKPGPQGYPGVGKPGMPGMPGKPGAMGMPGAKGEIGQK 184
Query: 1048 GSTAGPQQQQPAGAPQPGAVP-------PGVP----PPGPHGPSPFPNQQ-------TPP 1089
G P G P P +P PG+P P G GP P Q
Sbjct: 185 GEIGPMGIPGPQGPPGPHGLPGIGKPGGPGLPGQPGPKGDRGPKGLPGPQGLRGPKGDKG 244
Query: 1090 SMMPGAVPGSGHPGVADPGTPLPPDPTAPSPGTVTPVPPPQ 1130
MPGA G PG+ P P+ P PG VT P PQ
Sbjct: 245 FGMPGAPGVKGPPGMHGPPGPVGL-PGVGKPG-VTGFPGPQ 283
Score = 52.0 bits (123), Expect = 3e-06
Identities = 48/147 (32%), Positives = 51/147 (34%), Gaps = 43/147 (29%)
Query: 992 PPPALPPGSQPIPPTGAAGPPAVHGLAVAPASVVPAPAGSGAPPGSLGPSEQIGQAGSTA 1051
P P PPG +P G G P + G P P G P G GP G G
Sbjct: 193 PGPQGPPGPHGLPGIGKPGGPGLPGQ--------PGPKGDRGPKGLPGPQGLRGPKGDK- 243
Query: 1052 GPQQQQPAGAPQPGAVPPGVP-PPGPHGPSPFPNQQTPPSMMPGAVPGSGHPGV------ 1104
G PGA PGV PPG HGP P +PG G PGV
Sbjct: 244 --------GFGMPGA--PGVKGPPGMHGPPG-----------PVGLPGVGKPGVTGFPGP 282
Query: 1105 ----ADPGTPLPPDPTAP--SPGTVTP 1125
PG P P P P PG P
Sbjct: 283 QGPLGKPGAPGEPGPQGPIGVPGVQGP 309
Score = 48.5 bits (114), Expect = 4e-05
Identities = 51/148 (34%), Positives = 56/148 (37%), Gaps = 14/148 (9%)
Query: 988 QQQQPPPALPP---GSQPIPPTGAAGP---PAVHGLAVAPASVVPAPAGSGAPPGSLGPS 1041
Q Q PP +P S PI P G GP P + G P P AG PPG G
Sbjct: 491 QGLQGPPGIPGIGGPSGPIGPPGIPGPKGEPGLPGPPGFPGIGKPGVAGLHGPPGKPGAL 550
Query: 1042 EQIGQAGSTAGPQQQQPAGAPQPGAVPPGVPPP-GPHGPS-PFPNQQTPPSMMPGAVPG- 1098
GQ G P P G P P AV P PPP G + P P GA G
Sbjct: 551 GPQGQPGLPGPPG---PPGPPGPPAVMPPTPPPQGEYLPDMGLGIDGVKPPHAYGAKKGK 607
Query: 1099 SGHPGVADPGTPLPPDPTAPSPGTVTPV 1126
+G P P + TAP P PV
Sbjct: 608 NGGPAYEMPA--FTAELTAPFPPVGAPV 633
Score = 48.1 bits (113), Expect = 5e-05
Identities = 42/139 (30%), Positives = 48/139 (34%), Gaps = 19/139 (13%)
Query: 994 PALPPGSQPIPPTGAAGPPAVHGLAVAPASVVPAPAGSGAPPGSLGPSEQIGQAGSTAGP 1053
P P G G GPP + G+ G G PG+LGP G+ G P
Sbjct: 327 PGFPGGKGEQGLPGLPGPPGLPGIGKPGFPGPKGDRGMGGVPGALGPR---GEKGPIGAP 383
Query: 1054 QQQQPAGAPQPGAVPPGVPP------PGPHGPSPFPNQQTPPSMMPGAVPG-SGHPG--- 1103
P G P +P + P PGP G Q PP P PG G PG
Sbjct: 384 GIGGPPGEPGLPGIPGPMGPPGAIGFPGPKGEGGIVGPQGPPG--PKGEPGLQGFPGKPG 441
Query: 1104 ----VADPGTPLPPDPTAP 1118
V PG P P P
Sbjct: 442 FLGEVGPPGMRGLPGPIGP 460
Score = 32.3 bits (72), Expect = 2.6
Identities = 50/176 (28%), Positives = 60/176 (34%), Gaps = 39/176 (22%)
Query: 991 QPPPALPPGSQPIPPTGAAGPP---AVHGLAVAPASVVPAPAGSGAP--PGSLGPSEQIG 1045
Q PP +PP P G P A GLA+ + G P P + +
Sbjct: 39 QIPPQMPPQIPQYQPLGQQVPHMPLAKDGLAMGK-EMPHLQYGKEYPHLPQYMKEIQPAP 97
Query: 1046 QAGSTAGPQ------------QQQPAGAPQPGAVP--PGVPP------PGPHGPSPFPNQ 1085
+ G A P+ +Q P G P P P PG+P G GP +P
Sbjct: 98 RMGKEAVPKKGKEIPLASLRGEQGPRGEPGPRGPPGPPGLPGHGIPGIKGKPGPQGYPGV 157
Query: 1086 QTP--PSM--------MPGAVPGSGHPGVADP-GTPLPPDPTAPS--PGTVTPVPP 1128
P P M MPGA G G P G P P P P PG P P
Sbjct: 158 GKPGMPGMPGKPGAMGMPGAKGEIGQKGEIGPMGIPGPQGPPGPHGLPGIGKPGGP 213
>gi|17738302 alpha 1 type VIII collagen precursor [Homo sapiens]
Length = 744
Score = 68.6 bits (166), Expect = 3e-11
Identities = 55/166 (33%), Positives = 62/166 (37%), Gaps = 30/166 (18%)
Query: 989 QQQPPPALPPGSQPIPPT----GAAGPPAVHGLA--VAPASVVPAPAGSGAP--PGSLGP 1040
Q P P PG Q P G GPP + GL + P G P PG LGP
Sbjct: 422 QGPPGPKGEPGLQGFPGKPGFLGEVGPPGMRGLPGPIGPKGEAGQKGVPGLPGVPGLLGP 481
Query: 1041 SEQIGQAGSTAGPQQQQPAGAPQPGAVPPGVPPPGPHGPSPFPNQQTPPSM--------- 1091
G+ G Q P G P G + PPG GP P PP
Sbjct: 482 K---GEPGIPGDQGLQGPPGIPGIGGPSGPIGPPGIPGPKGEPGLPGPPGFPGIGKPGVA 538
Query: 1092 -------MPGAVPGSGHPGVADPGTPLPPDPTAPSPGTVTPVPPPQ 1130
PGA+ G PG+ PG P PP P P P + P PPPQ
Sbjct: 539 GLHGPPGKPGALGPQGQPGL--PGPPGPPGPPGP-PAVMPPTPPPQ 581
Score = 53.1 bits (126), Expect = 1e-06
Identities = 44/142 (30%), Positives = 53/142 (37%), Gaps = 26/142 (18%)
Query: 991 QPPPALPPGSQPIP-PTGAAGPPAVHGLAVAPASVVPAPAGSGAPPGSLGPSEQIGQAGS 1049
QP P G + +P P G GP G + A V P G PPG +G +G+ G
Sbjct: 218 QPGPKGDRGPKGLPGPQGLRGPKGDKGFGMPGAPGVKGPPGMHGPPGPVG-LPGVGKPGV 276
Query: 1050 TAGPQQQQPAGAP----QPGAV----------PPGVPPPGPHGPSPFPNQQTPPSMM--- 1092
T P Q P G P +PG PPG+P G G P Q P
Sbjct: 277 TGFPGPQGPLGKPGAPGEPGPQGPIGVPGVQGPPGIPGIGKPGQDGIPGQPGFPGGKGEQ 336
Query: 1093 -------PGAVPGSGHPGVADP 1107
P +PG G PG P
Sbjct: 337 GLPGLPGPPGLPGIGKPGFPGP 358
Score = 52.0 bits (123), Expect = 3e-06
Identities = 50/161 (31%), Positives = 59/161 (36%), Gaps = 23/161 (14%)
Query: 991 QPPPALPPGSQPIPPTGAAGPPAVHGLAVAPASVVPAPAGSGAPPGSLG---PSEQIGQA 1047
+P P PPG +P G G G P P G PG++G +IGQ
Sbjct: 125 EPGPRGPPGPPGLPGHGIPGIKGKPGPQGYPGVGKPGMPGMPGKPGAMGMPGAKGEIGQK 184
Query: 1048 GSTAGPQQQQPAGAPQPGAVP-------PGVP----PPGPHGPSPFPNQQ-------TPP 1089
G P G P P +P PG+P P G GP P Q
Sbjct: 185 GEIGPMGIPGPQGPPGPHGLPGIGKPGGPGLPGQPGPKGDRGPKGLPGPQGLRGPKGDKG 244
Query: 1090 SMMPGAVPGSGHPGVADPGTPLPPDPTAPSPGTVTPVPPPQ 1130
MPGA G PG+ P P+ P PG VT P PQ
Sbjct: 245 FGMPGAPGVKGPPGMHGPPGPVGL-PGVGKPG-VTGFPGPQ 283
Score = 52.0 bits (123), Expect = 3e-06
Identities = 48/147 (32%), Positives = 51/147 (34%), Gaps = 43/147 (29%)
Query: 992 PPPALPPGSQPIPPTGAAGPPAVHGLAVAPASVVPAPAGSGAPPGSLGPSEQIGQAGSTA 1051
P P PPG +P G G P + G P P G P G GP G G
Sbjct: 193 PGPQGPPGPHGLPGIGKPGGPGLPGQ--------PGPKGDRGPKGLPGPQGLRGPKGDK- 243
Query: 1052 GPQQQQPAGAPQPGAVPPGVP-PPGPHGPSPFPNQQTPPSMMPGAVPGSGHPGV------ 1104
G PGA PGV PPG HGP P +PG G PGV
Sbjct: 244 --------GFGMPGA--PGVKGPPGMHGPPG-----------PVGLPGVGKPGVTGFPGP 282
Query: 1105 ----ADPGTPLPPDPTAP--SPGTVTP 1125
PG P P P P PG P
Sbjct: 283 QGPLGKPGAPGEPGPQGPIGVPGVQGP 309
Score = 48.5 bits (114), Expect = 4e-05
Identities = 51/148 (34%), Positives = 56/148 (37%), Gaps = 14/148 (9%)
Query: 988 QQQQPPPALPP---GSQPIPPTGAAGP---PAVHGLAVAPASVVPAPAGSGAPPGSLGPS 1041
Q Q PP +P S PI P G GP P + G P P AG PPG G
Sbjct: 491 QGLQGPPGIPGIGGPSGPIGPPGIPGPKGEPGLPGPPGFPGIGKPGVAGLHGPPGKPGAL 550
Query: 1042 EQIGQAGSTAGPQQQQPAGAPQPGAVPPGVPPP-GPHGPS-PFPNQQTPPSMMPGAVPG- 1098
GQ G P P G P P AV P PPP G + P P GA G
Sbjct: 551 GPQGQPGLPGPPG---PPGPPGPPAVMPPTPPPQGEYLPDMGLGIDGVKPPHAYGAKKGK 607
Query: 1099 SGHPGVADPGTPLPPDPTAPSPGTVTPV 1126
+G P P + TAP P PV
Sbjct: 608 NGGPAYEMPA--FTAELTAPFPPVGAPV 633
Score = 48.1 bits (113), Expect = 5e-05
Identities = 42/139 (30%), Positives = 48/139 (34%), Gaps = 19/139 (13%)
Query: 994 PALPPGSQPIPPTGAAGPPAVHGLAVAPASVVPAPAGSGAPPGSLGPSEQIGQAGSTAGP 1053
P P G G GPP + G+ G G PG+LGP G+ G P
Sbjct: 327 PGFPGGKGEQGLPGLPGPPGLPGIGKPGFPGPKGDRGMGGVPGALGPR---GEKGPIGAP 383
Query: 1054 QQQQPAGAPQPGAVPPGVPP------PGPHGPSPFPNQQTPPSMMPGAVPG-SGHPG--- 1103
P G P +P + P PGP G Q PP P PG G PG
Sbjct: 384 GIGGPPGEPGLPGIPGPMGPPGAIGFPGPKGEGGIVGPQGPPG--PKGEPGLQGFPGKPG 441
Query: 1104 ----VADPGTPLPPDPTAP 1118
V PG P P P
Sbjct: 442 FLGEVGPPGMRGLPGPIGP 460
Score = 32.3 bits (72), Expect = 2.6
Identities = 50/176 (28%), Positives = 60/176 (34%), Gaps = 39/176 (22%)
Query: 991 QPPPALPPGSQPIPPTGAAGPP---AVHGLAVAPASVVPAPAGSGAP--PGSLGPSEQIG 1045
Q PP +PP P G P A GLA+ + G P P + +
Sbjct: 39 QIPPQMPPQIPQYQPLGQQVPHMPLAKDGLAMGK-EMPHLQYGKEYPHLPQYMKEIQPAP 97
Query: 1046 QAGSTAGPQ------------QQQPAGAPQPGAVP--PGVPP------PGPHGPSPFPNQ 1085
+ G A P+ +Q P G P P P PG+P G GP +P
Sbjct: 98 RMGKEAVPKKGKEIPLASLRGEQGPRGEPGPRGPPGPPGLPGHGIPGIKGKPGPQGYPGV 157
Query: 1086 QTP--PSM--------MPGAVPGSGHPGVADP-GTPLPPDPTAPS--PGTVTPVPP 1128
P P M MPGA G G P G P P P P PG P P
Sbjct: 158 GKPGMPGMPGKPGAMGMPGAKGEIGQKGEIGPMGIPGPQGPPGPHGLPGIGKPGGP 213
>gi|148227842 Myb-like, SWIRM and MPN domains 1 [Homo sapiens]
Length = 828
Score = 68.2 bits (165), Expect = 4e-11
Identities = 55/208 (26%), Positives = 91/208 (43%), Gaps = 37/208 (17%)
Query: 324 YTKSKRGHREEEQEDLTKDMDEPSPVPNVEEVTLPKTVNTKKDSESAPVKGGTMTDLDEQ 383
++KS RG + E++D T E +TL + D +S +L++Q
Sbjct: 272 FSKSSRGCLQNEKQDETLSSSE---------ITLWTEKQSNGDKKSI--------ELNDQ 314
Query: 384 EDESMETTGKDEDENSTGNKGEQTKNPD--------------LHEDNVTEQTHH---III 426
+ + D Q +P+ H + E++H +
Sbjct: 315 KFNELIKNCNKHDGRGIIVDARQLPSPEPCEIQKNLNDNEMLFHSCQMVEESHEEEELKP 374
Query: 427 PSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTSTAC 486
P D N + E++A+PEFF G+ ++KTPE YL RN+++D + + +YL T+
Sbjct: 375 PEQEIEIDRNIIQEEEKQAIPEFFEGR-QAKTPERYLKIRNYILDQWEICKPKYLNKTSV 433
Query: 487 RRNL--AGDVCAIMRVHAFLEQWGLINY 512
R L GDV I R+H +LE G IN+
Sbjct: 434 RPGLKNCGDVNCIGRIHTYLELIGAINF 461
Score = 30.4 bits (67), Expect = 9.9
Identities = 14/37 (37%), Positives = 22/37 (59%)
Query: 626 ASATREWTEQETLLLLEALEMYKDDWNKVSEHVGSRT 662
AS + +WT +E L + L + W K+S+ +GSRT
Sbjct: 115 ASYSVKWTIEEKELFEQGLAKFGRRWTKISKLIGSRT 151
>gi|163965366 nascent polypeptide-associated complex alpha subunit
isoform a [Homo sapiens]
Length = 2078
Score = 68.2 bits (165), Expect = 4e-11
Identities = 50/144 (34%), Positives = 59/144 (40%), Gaps = 21/144 (14%)
Query: 992 PPPALPPGSQPIP----PTGAAGPPAVHGLAVAPASVVPAPAGSGAPPGSLGPSEQIGQA 1047
PP A PP + P P A PPA + P+P G+ PP + PS +
Sbjct: 942 PPAATPPSPKGGPATPSPKWAPTPPAATPPSPKGGPATPSPKGAPTPPAATPPSPK---- 997
Query: 1048 GSTAGPQQQQPAGAPQPGAVPPGVPPPGPHG---PSPFP-NQQTPPSMMPGAVPGSGHPG 1103
GP P GAP PP V PP P G +PFP TPP+ P + GS
Sbjct: 998 ---GGPATPSPKGAP----TPPAVTPPSPKGSPAATPFPKGASTPPAATPPSPKGSPAAT 1050
Query: 1104 VADPGTPLPPDPTAPSP--GTVTP 1125
G P P T PSP G TP
Sbjct: 1051 PLPKGAPTTPAATLPSPKGGPATP 1074
Score = 66.2 bits (160), Expect = 2e-10
Identities = 57/169 (33%), Positives = 65/169 (38%), Gaps = 41/169 (24%)
Query: 993 PPALPPGSQPIPPTGAAGPPAVHGLAVAPASVVPAPAGS--------GAP--PGSLGPSE 1042
PPA+ P P P A P G + PA+ P+P GS GAP P + PS
Sbjct: 1011 PPAVTP---PSPKGSPAATPFPKGASTPPAATPPSPKGSPAATPLPKGAPTTPAATLPSP 1067
Query: 1043 QIGQAGSTAGPQQQQPAGAPQPGAVPPGVPPPGPHGPS----PFPNQQTPPS-------- 1090
+ GP GAP P A P P GP PS P P TPPS
Sbjct: 1068 K-------GGPATPSLKGAPTPPAATPPSPKGGPATPSPKGAPMPPAATPPSPKGGLATP 1120
Query: 1091 ------MMPGAVPGSGHPGVADP---GTPLPPDPTAPSPGTVTPVPPPQ 1130
P A P S G+A P G P P T PSP PPP+
Sbjct: 1121 PHKGAPTTPAATPPSPKGGLATPPPKGAPTTPAATPPSPKGGLATPPPK 1169
Score = 64.3 bits (155), Expect = 6e-10
Identities = 54/171 (31%), Positives = 66/171 (38%), Gaps = 39/171 (22%)
Query: 992 PPPALP--PGSQPIPPTGAAGPPAVHGLAVAPASV---------VPAPAGSGAPPGSLGP 1040
PP P P + P P G P+ G PA+ P+P G+ P + P
Sbjct: 1167 PPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPP 1226
Query: 1041 SEQIGQAGSTAGPQQQQPAGAPQPGAVPPGVPPPGPHGP----SPFPNQQTPPSMMPG-A 1095
S + G A P P GAP A P P GP P +P P TPPS+ G A
Sbjct: 1227 SPK----GGLATP---SPKGAPTTPAATPPSPKGGPATPPPKGAPTPPAATPPSLKGGLA 1279
Query: 1096 VP---GSGHPGVADP-------------GTPLPPDPTAPSPGTVTPVPPPQ 1130
P G+ +P V P G P PP T PSP PPP+
Sbjct: 1280 TPPHKGAPNPAVVTPPSPKGGPATSPPKGAPTPPAATPPSPKGSPGTPPPK 1330
Score = 63.2 bits (152), Expect = 1e-09
Identities = 50/149 (33%), Positives = 59/149 (39%), Gaps = 27/149 (18%)
Query: 992 PPPALPPGSQPIP----PTGAAGPPAVHGLAVAPASVVPAPAGSGAPPGSLGPSEQIGQA 1047
PP A PP + P P GA PPA + P+P G+ PP PS +
Sbjct: 965 PPAATPPSPKGGPATPSPKGAPTPPAATPPSPKGGPATPSPKGAPTPPAVTPPSPK---- 1020
Query: 1048 GSTAGPQQQQPAGAPQP--GAVPPGVPPPGPHG-----PSPFPNQQTPPSMMPGAVPGSG 1100
GS PA P P + PP PP P G P P TP + +P G
Sbjct: 1021 GS--------PAATPFPKGASTPPAATPPSPKGSPAATPLPKGAPTTPAATLPSPKGGPA 1072
Query: 1101 HPGVADPGTPLPPDPTAPSP--GTVTPVP 1127
P + G P PP T PSP G TP P
Sbjct: 1073 TPSL--KGAPTPPAATPPSPKGGPATPSP 1099
Score = 62.0 bits (149), Expect = 3e-09
Identities = 51/158 (32%), Positives = 63/158 (39%), Gaps = 27/158 (17%)
Query: 996 LPPGSQPIPPTGAAGPPAVHGLAVAPASVVPAPAGS-------GAP--PGSLGPSEQIGQ 1046
+PP + P P G P G PA+ P+P G GAP P + PS + G
Sbjct: 1104 MPPAATPPSPKGGLATPPHKGAPTTPAATPPSPKGGLATPPPKGAPTTPAATPPSPKGGL 1163
Query: 1047 A-----GSTAGPQQQQPA-----GAPQPGAVP--PGVPPPGPHGPSPFPNQQTPPSMMPG 1094
A G+ P P+ P P P P PP P G P+ + P+ P
Sbjct: 1164 ATPPPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGLATPSPKGAPTT-PA 1222
Query: 1095 AVPGSGHPGVADP---GTPLPPDPTAPSP--GTVTPVP 1127
A P S G+A P G P P T PSP G TP P
Sbjct: 1223 ATPPSPKGGLATPSPKGAPTTPAATPPSPKGGPATPPP 1260
Score = 60.1 bits (144), Expect = 1e-08
Identities = 49/152 (32%), Positives = 59/152 (38%), Gaps = 19/152 (12%)
Query: 986 HQQQQQPPPALPP----GSQPIPPTGAAGPPAVHGLAVAPASVVPAPAGSGAPPGSLGPS 1041
H+ P A PP G PP GA PA + P P G+ P + PS
Sbjct: 1122 HKGAPTTPAATPPSPKGGLATPPPKGAPTTPAATPPSPKGGLATPPPKGAPTTPAATPPS 1181
Query: 1042 EQIGQAGSTAGPQQQQPAGAPQPGAVPPGVPPPGPHGPSPFPNQQTPPSMMPGAVPGSGH 1101
+ G A P P GAP P PP P G P+ + P+ P A P S
Sbjct: 1182 PK----GGLATP---SPKGAP----TTPAATPPSPKGGLATPSPKGAPT-TPAATPPSPK 1229
Query: 1102 PGVADP---GTPLPPDPTAPSPGTVTPVPPPQ 1130
G+A P G P P T PSP PPP+
Sbjct: 1230 GGLATPSPKGAPTTPAATPPSPKGGPATPPPK 1261
Score = 59.3 bits (142), Expect = 2e-08
Identities = 53/152 (34%), Positives = 62/152 (40%), Gaps = 15/152 (9%)
Query: 992 PPPALPPGSQ---PIPPTGAAGP-----PAVHGLAVAP--ASVVPAPAGSGAPPGSLG-P 1040
PP P S P P G A P PA+ + +P A PAP G A P G P
Sbjct: 881 PPKETPTPSVVNLPFPKEGPATPAPKQAPALSMTSSSPKKARATPAPKGIPASPSPKGAP 940
Query: 1041 SEQIGQAGS-TAGPQQQQPAGAPQPGAVPPGVPPPGPHGPSPFPNQQTPPSMMPGAVPGS 1099
+ S GP P AP P A P P GP PSP TPP+ P + P
Sbjct: 941 TPPAATPPSPKGGPATPSPKWAPTPPAATPPSPKGGPATPSP-KGAPTPPAATPPS-PKG 998
Query: 1100 GHPGVADPGTPLPPDPTAPSP-GTVTPVPPPQ 1130
G + G P PP T PSP G+ P P+
Sbjct: 999 GPATPSPKGAPTPPAVTPPSPKGSPAATPFPK 1030
Score = 56.2 bits (134), Expect = 2e-07
Identities = 52/164 (31%), Positives = 61/164 (37%), Gaps = 26/164 (15%)
Query: 988 QQQQPPPALPPGSQPIPPTGAAGPPAVHGLA----VAPASVVPAPAGSGAPPGSLGP--- 1040
Q + PA P P GA P AV L+ P P P+ P GP
Sbjct: 844 QGSKDSPATTHSPTPPSPKGAPTPSAVTPLSPKGVTLPPKETPTPSVVNLPFPKEGPATP 903
Query: 1041 -----------SEQIGQAGSTAGPQ----QQQPAGAPQPGAVPPGVPPPGPHGPSPFPNQ 1085
S +A +T P+ P GAP P A P P GP PSP
Sbjct: 904 APKQAPALSMTSSSPKKARATPAPKGIPASPSPKGAPTPPAATPPSPKGGPATPSP-KWA 962
Query: 1086 QTPPSMMPGAVPGSGHPGVADPGTPLPPDPTAPSP--GTVTPVP 1127
TPP+ P + P G + G P PP T PSP G TP P
Sbjct: 963 PTPPAATPPS-PKGGPATPSPKGAPTPPAATPPSPKGGPATPSP 1005
Score = 54.7 bits (130), Expect = 5e-07
Identities = 48/153 (31%), Positives = 54/153 (35%), Gaps = 16/153 (10%)
Query: 993 PPALPPGSQPIPPTGAAGPPAV------HGLAVAPASVVPAPAGSGAPPGSLGPSEQIGQ 1046
PP+ G PP GA PPA GLA P P PA P GP+ +
Sbjct: 1248 PPSPKGGPATPPPKGAPTPPAATPPSLKGGLATPPHKGAPNPAVVTPPSPKGGPATSPPK 1307
Query: 1047 AGST----AGPQQQQPAGAPQP--GAVPPGVPPPGPHGPSPFPNQQTPPSMMPGAVPGSG 1100
T P + G P P PP V PP P G P TP S P S
Sbjct: 1308 GAPTPPAATPPSPKGSPGTPPPKGAPTPPAVTPPSPKGTPTLP-ATTPSSKGGPTTPSSK 1366
Query: 1101 H---PGVADPGTPLPPDPTAPSPGTVTPVPPPQ 1130
P A P P T PSP +P P+
Sbjct: 1367 EGPTPPAATPSHKGGPAMTPPSPKRGPAIPSPK 1399
Score = 52.8 bits (125), Expect = 2e-06
Identities = 48/146 (32%), Positives = 55/146 (37%), Gaps = 24/146 (16%)
Query: 1004 PPT--GAAGPPAVHGLAVAPASVVPAPAGSGAPPGSLGPSEQIGQAGSTAGPQQQQPAGA 1061
PPT G+AGP G +P S V A S P SL +T P P GA
Sbjct: 808 PPTKKGSAGPDTPIGNLSSPVSPVEA---SFLPENSLSFQGSKDSPATTHSPTPPSPKGA 864
Query: 1062 PQPGAV----PPGVPPPGPHGPS------PFPNQ--------QTPPSMMPGAVPGSGHPG 1103
P P AV P GV P P+ PFP + Q P M + P
Sbjct: 865 PTPSAVTPLSPKGVTLPPKETPTPSVVNLPFPKEGPATPAPKQAPALSMTSSSPKKARAT 924
Query: 1104 VADPGTPLPPDPT-APSPGTVTPVPP 1128
A G P P P AP+P TP P
Sbjct: 925 PAPKGIPASPSPKGAPTPPAATPPSP 950
Score = 50.8 bits (120), Expect = 7e-06
Identities = 48/170 (28%), Positives = 62/170 (36%), Gaps = 34/170 (20%)
Query: 992 PPPALPPGSQPIP----PTGAAGPPAV-----HGLAVAPASVVPAPAGSGAPPGSLGPSE 1042
PP A PP + P P GA PPAV G PA+ + G P GP+
Sbjct: 1312 PPAATPPSPKGSPGTPPPKGAPTPPAVTPPSPKGTPTLPATTPSSKGGPTTPSSKEGPTP 1371
Query: 1043 QIGQAGSTAGPQQQQPA-----------GAPQPGAVPPGVPPPGPHGP-------SPFPN 1084
GP P+ G P AV P P P P +P
Sbjct: 1372 PAATPSHKGGPAMTPPSPKRGPAIPSPKGDPTSPAVIPLSPKKAPATPVTREGAATPSKG 1431
Query: 1085 QQTPPSMMPGAVPGSGHPGVADP-GTPLPP----DPTAPSPGTVTPVPPP 1129
TPP++ P ++ + P + P G P P DPT P+ +P PP
Sbjct: 1432 DLTPPAVTPVSLKKA--PATSAPKGGPATPSSKGDPTLPAVTPPSPKEPP 1479
Score = 49.3 bits (116), Expect = 2e-05
Identities = 48/146 (32%), Positives = 60/146 (41%), Gaps = 35/146 (23%)
Query: 994 PALP-PGSQPIPPTGAAGPPAVHGLAVAPASVVPAPAGSGAPPGSLGPSEQIGQAGSTAG 1052
PA P P P PP AA PP+ G PA+ P+P + PP + PS + G
Sbjct: 931 PASPSPKGAPTPP--AATPPSPKG---GPAT--PSPKWAPTPPAATPPSPK-------GG 976
Query: 1053 PQQQQPAGAPQPGAVPPGVPPPGPHGPSP-----FPNQQ---TPPSMMPGAVPGSGHPGV 1104
P P GAP P P PSP P+ + TPP++ P + GS
Sbjct: 977 PATPSPKGAPTP---------PAATPPSPKGGPATPSPKGAPTPPAVTPPSPKGSPAATP 1027
Query: 1105 ADPGTPLPPDPTAPSP---GTVTPVP 1127
G PP T PSP TP+P
Sbjct: 1028 FPKGASTPPAATPPSPKGSPAATPLP 1053
Score = 45.8 bits (107), Expect = 2e-04
Identities = 37/141 (26%), Positives = 50/141 (35%), Gaps = 14/141 (9%)
Query: 1004 PPTGAAGPPAVHGLAVAPASVVPAPAGSGAPPGSLG-----------PSEQIG--QAGST 1050
P G PPAV +++ A AP G A P S G P E Q ++
Sbjct: 1428 PSKGDLTPPAVTPVSLKKAPATSAPKGGPATPSSKGDPTLPAVTPPSPKEPPAPKQVATS 1487
Query: 1051 AGPQQQQPAGAPQPGAVPPGVPPPGPHGPSPFPNQQTPPSMMPGAVPGSGHPGVADPGTP 1110
+ P++ AP P V P P P+ + P + P P
Sbjct: 1488 SSPKKAPATPAPMGAPTLPAVIPSSPKEVPATPSSRRDPIAPTATLLSKKTPATLAPKEA 1547
Query: 1111 L-PPDPTAPSPGTVTPVPPPQ 1130
L PP T PSP +P P+
Sbjct: 1548 LIPPAMTVPSPKKTPAIPTPK 1568
Score = 44.7 bits (104), Expect = 5e-04
Identities = 43/146 (29%), Positives = 55/146 (37%), Gaps = 19/146 (13%)
Query: 994 PALPPGSQ-PIPPTGAA------GPPAVHGLAVAPASVVPAPAGSGAPP----GSLGPSE 1042
PA P + PI PT A + PA VP+P + A P PS
Sbjct: 1517 PATPSSRRDPIAPTATLLSKKTPATLAPKEALIPPAMTVPSPKKTPAIPTPKEAPATPSS 1576
Query: 1043 QIGQAGSTAGPQQQQPAGAPQPGAVPPGVPPPGPHGPSPFPNQQTPPSMMPGAVPGSGHP 1102
+ + P + A +P+ +PP V P P +P P TPPS P G
Sbjct: 1577 KEASSPPAVTPSTYKGAPSPKELLIPPAVTSPSPK-EAPTPPAVTPPS------PEKGPA 1629
Query: 1103 GVADPGTPLPPDPTAPSPGTVTPVPP 1128
A GTP P P PS +P P
Sbjct: 1630 TPAPKGTPTSP-PVTPSSLKDSPTSP 1654
Score = 42.7 bits (99), Expect = 0.002
Identities = 43/169 (25%), Positives = 57/169 (33%), Gaps = 35/169 (20%)
Query: 994 PALPPGSQPIPPTGAAGPPAVHGLAVAPASVVPAPAGSGAPPGSL--GPSEQIGQAGSTA 1051
P LP + P P A + A PAP G+ P + P E S
Sbjct: 1465 PTLPAVTPPSPKEPPAPKQVATSSSPKKAPATPAPMGAPTLPAVIPSSPKEVPATPSSRR 1524
Query: 1052 GP--------QQQQPAG-APQPGAVPPGVPPPGPHGPSPFPNQQ------------TPPS 1090
P ++ PA AP+ +PP + P P P + +PP+
Sbjct: 1525 DPIAPTATLLSKKTPATLAPKEALIPPAMTVPSPKKTPAIPTPKEAPATPSSKEASSPPA 1584
Query: 1091 MMPGAVPGSGHP-------GVADPG---TPLPPDPTAPSP--GTVTPVP 1127
+ P G+ P V P P PP T PSP G TP P
Sbjct: 1585 VTPSTYKGAPSPKELLIPPAVTSPSPKEAPTPPAVTPPSPEKGPATPAP 1633
Score = 39.3 bits (90), Expect = 0.021
Identities = 36/136 (26%), Positives = 46/136 (33%), Gaps = 21/136 (15%)
Query: 994 PALPPGSQP--IPPTGAAGPPAVHGLAVAPASVVPAPAGSGAPPGSLGPSEQIGQAGSTA 1051
P+ S P + P+ G P+ L + PA P+P + PP PS +
Sbjct: 1574 PSSKEASSPPAVTPSTYKGAPSPKELLIPPAVTSPSPKEAPTPPAVTPPSPE-------K 1626
Query: 1052 GPQQQQPAGAPQPGAVPPGVPPPGPHGPSPFPNQQTPPSMMPGAVPGSGHPGVADPGTPL 1111
GP P G P V P P P+ + M VP A G P
Sbjct: 1627 GPATPAPKGTPTSPPVTPSSLKDSPTSPA------SVTCKMGATVP------QASKGLPA 1674
Query: 1112 PPDPTAPSPGTVTPVP 1127
PTA V P P
Sbjct: 1675 KKGPTALKEVLVAPAP 1690
Score = 37.7 bits (86), Expect = 0.062
Identities = 44/177 (24%), Positives = 63/177 (35%), Gaps = 42/177 (23%)
Query: 994 PALPPGSQPIP----PTGAAGPPAVHGLAVAPASVVPAPA--GSGAPPGSL---GPSEQI 1044
P +P S+ P P P A LA VP+P+ +G PPG+ G S
Sbjct: 699 PLVPTASENCPVAPSPQNTCAPLATLVLAPEIPKSVPSPSLPPAGTPPGTKKVDGISHTS 758
Query: 1045 GQAGSTAGPQQ------QQPAGAPQPGAVPPGVPPPGPHGPSPFPNQQTPPSMMPGAVPG 1098
A + P++ A A G + P P G S P + PP+ A P
Sbjct: 759 ALAPVASSPKECPTEDSGASATASSKGTLTYLADSPSPLGVSVSPQTKRPPTKKGSAGPD 818
Query: 1099 SGHPGVADPGTPL--------------------------PPDPT-APSPGTVTPVPP 1128
+ ++ P +P+ PP P AP+P VTP+ P
Sbjct: 819 TPIGNLSSPVSPVEASFLPENSLSFQGSKDSPATTHSPTPPSPKGAPTPSAVTPLSP 875
>gi|119395760 diaphanous 1 isoform 2 [Homo sapiens]
Length = 1263
Score = 67.0 bits (162), Expect = 1e-10
Identities = 71/265 (26%), Positives = 107/265 (40%), Gaps = 47/265 (17%)
Query: 903 KAKHLAAVEERKIKSLVALLVETQ--MKKLEIKLRHFEELETIMDREREALEYQRQQLLA 960
K++ AA E+K+ S + E Q MKK+E FE+ + E++AL ++QQ+
Sbjct: 467 KSEAKAAELEKKLDSELTARHELQVEMKKME---SDFEQKLQDLQGEKDALHSEKQQIAT 523
Query: 961 DRQAFHMEQLKYA--------EMRARQQHFQQMHQQQQQPPPALPPGSQPIPPT----GA 1008
++Q E + E+ ++ + PP++P + P+PP G
Sbjct: 524 EKQDLEAEVSQLTGEVAKLTKELEDAKKEMASLSAAAITVPPSVPSRA-PVPPAPPLPGD 582
Query: 1009 AG----PPAVHGLAVAPASVVPAPAGSGAPPGSLGPSEQIGQAGSTA------------- 1051
+G PP G + P P P PG + S G TA
Sbjct: 583 SGTIIPPPPAPGDSTTPPPPPPPPPPPPPLPGGVCISSPPSLPGGTAISPPPPLSGDATI 642
Query: 1052 --GPQQQQPAGAPQPGAVPPG--VPPPGP-HGPSPFPNQQTPPSMMPGA--VPGSGHPGV 1104
P + G P P ++P G +PPP P G + P PP +PG+ +P P
Sbjct: 643 PPPPPLPEGVGIPSPSSLPGGTAIPPPPPLPGSARIP---PPPPPLPGSAGIPPPPPPLP 699
Query: 1105 ADPGTPLPPDPTAPSPGTVTPVPPP 1129
+ G P PP P PG P PPP
Sbjct: 700 GEAGMPPPPPPLPGGPG--IPPPPP 722
Score = 59.3 bits (142), Expect = 2e-08
Identities = 52/145 (35%), Positives = 56/145 (38%), Gaps = 16/145 (11%)
Query: 992 PPPALPPG----SQPIPPTGAA--GPPAVHGLAVAPASVVPAPAGSGAP-PGSLGPSEQI 1044
PPP LP G S P P G A PP + G A P P P G G P P SL I
Sbjct: 608 PPPPLPGGVCISSPPSLPGGTAISPPPPLSGDATIPPPP-PLPEGVGIPSPSSLPGGTAI 666
Query: 1045 GQAGSTAGPQQQQPAGAPQPGAVPPGVPPPGPHGPSPFPNQQTPPSMMPGAVPGSGHPGV 1104
G + P P PG+ PPP G + P P PG P PG
Sbjct: 667 PPPPPLPGSARIPPPPPPLPGSAGIPPPPPPLPGEAGMPPPPPPLPGGPGIPPPPPFPG- 725
Query: 1105 ADPGTPLPPDPTAPSPGTVTPVPPP 1129
PG P PP PG P PPP
Sbjct: 726 -GPGIPPPP------PGMGMPPPPP 743
Score = 57.8 bits (138), Expect = 6e-08
Identities = 62/238 (26%), Positives = 92/238 (38%), Gaps = 44/238 (18%)
Query: 910 VEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREREALEYQRQQLLADRQAFHMEQ 969
+++ K++ A E + KKL+ +L EL+ M + E + Q L ++ A H E+
Sbjct: 460 IDKTKVEKSEAKAAELE-KKLDSELTARHELQVEMKKMESDFEQKLQDLQGEKDALHSEK 518
Query: 970 LKYA-EMRARQQHFQQMHQQQQQPPPALPPGSQPIPPTGAAG---PPAVHGLA-VAPASV 1024
+ A E + + Q+ + + L + + AA PP+V A V PA
Sbjct: 519 QQIATEKQDLEAEVSQLTGEVAKLTKELEDAKKEMASLSAAAITVPPSVPSRAPVPPAPP 578
Query: 1025 VPAPAGSGAPPGSLGPSEQIGQAGSTAGPQQQQPAGAPQPG---AVPPGVPPPGPHGPSP 1081
+P +G+ PP P PG PP PPP P P P
Sbjct: 579 LPGDSGTIIPP-------------------------PPAPGDSTTPPPPPPPPPPPPPLP 613
Query: 1082 FPNQQTPPSMMPGAVPGSGHPGVADPGTPLPPDPT-----APSP-----GTVTPVPPP 1129
+ P +PG S P ++ T PP P PSP GT P PPP
Sbjct: 614 GGVCISSPPSLPGGTAISPPPPLSGDATIPPPPPLPEGVGIPSPSSLPGGTAIPPPPP 671
Score = 30.4 bits (67), Expect = 9.9
Identities = 16/37 (43%), Positives = 17/37 (45%), Gaps = 2/37 (5%)
Query: 992 PPPALP--PGSQPIPPTGAAGPPAVHGLAVAPASVVP 1026
PPP P PG P PP PP G V A V+P
Sbjct: 719 PPPPFPGGPGIPPPPPGMGMPPPPPFGFGVPAAPVLP 755
>gi|119395758 diaphanous 1 isoform 1 [Homo sapiens]
Length = 1272
Score = 67.0 bits (162), Expect = 1e-10
Identities = 71/265 (26%), Positives = 107/265 (40%), Gaps = 47/265 (17%)
Query: 903 KAKHLAAVEERKIKSLVALLVETQ--MKKLEIKLRHFEELETIMDREREALEYQRQQLLA 960
K++ AA E+K+ S + E Q MKK+E FE+ + E++AL ++QQ+
Sbjct: 476 KSEAKAAELEKKLDSELTARHELQVEMKKME---SDFEQKLQDLQGEKDALHSEKQQIAT 532
Query: 961 DRQAFHMEQLKYA--------EMRARQQHFQQMHQQQQQPPPALPPGSQPIPPT----GA 1008
++Q E + E+ ++ + PP++P + P+PP G
Sbjct: 533 EKQDLEAEVSQLTGEVAKLTKELEDAKKEMASLSAAAITVPPSVPSRA-PVPPAPPLPGD 591
Query: 1009 AG----PPAVHGLAVAPASVVPAPAGSGAPPGSLGPSEQIGQAGSTA------------- 1051
+G PP G + P P P PG + S G TA
Sbjct: 592 SGTIIPPPPAPGDSTTPPPPPPPPPPPPPLPGGVCISSPPSLPGGTAISPPPPLSGDATI 651
Query: 1052 --GPQQQQPAGAPQPGAVPPG--VPPPGP-HGPSPFPNQQTPPSMMPGA--VPGSGHPGV 1104
P + G P P ++P G +PPP P G + P PP +PG+ +P P
Sbjct: 652 PPPPPLPEGVGIPSPSSLPGGTAIPPPPPLPGSARIP---PPPPPLPGSAGIPPPPPPLP 708
Query: 1105 ADPGTPLPPDPTAPSPGTVTPVPPP 1129
+ G P PP P PG P PPP
Sbjct: 709 GEAGMPPPPPPLPGGPG--IPPPPP 731
Score = 59.3 bits (142), Expect = 2e-08
Identities = 52/145 (35%), Positives = 56/145 (38%), Gaps = 16/145 (11%)
Query: 992 PPPALPPG----SQPIPPTGAA--GPPAVHGLAVAPASVVPAPAGSGAP-PGSLGPSEQI 1044
PPP LP G S P P G A PP + G A P P P G G P P SL I
Sbjct: 617 PPPPLPGGVCISSPPSLPGGTAISPPPPLSGDATIPPPP-PLPEGVGIPSPSSLPGGTAI 675
Query: 1045 GQAGSTAGPQQQQPAGAPQPGAVPPGVPPPGPHGPSPFPNQQTPPSMMPGAVPGSGHPGV 1104
G + P P PG+ PPP G + P P PG P PG
Sbjct: 676 PPPPPLPGSARIPPPPPPLPGSAGIPPPPPPLPGEAGMPPPPPPLPGGPGIPPPPPFPG- 734
Query: 1105 ADPGTPLPPDPTAPSPGTVTPVPPP 1129
PG P PP PG P PPP
Sbjct: 735 -GPGIPPPP------PGMGMPPPPP 752
Score = 57.8 bits (138), Expect = 6e-08
Identities = 62/238 (26%), Positives = 92/238 (38%), Gaps = 44/238 (18%)
Query: 910 VEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREREALEYQRQQLLADRQAFHMEQ 969
+++ K++ A E + KKL+ +L EL+ M + E + Q L ++ A H E+
Sbjct: 469 IDKTKVEKSEAKAAELE-KKLDSELTARHELQVEMKKMESDFEQKLQDLQGEKDALHSEK 527
Query: 970 LKYA-EMRARQQHFQQMHQQQQQPPPALPPGSQPIPPTGAAG---PPAVHGLA-VAPASV 1024
+ A E + + Q+ + + L + + AA PP+V A V PA
Sbjct: 528 QQIATEKQDLEAEVSQLTGEVAKLTKELEDAKKEMASLSAAAITVPPSVPSRAPVPPAPP 587
Query: 1025 VPAPAGSGAPPGSLGPSEQIGQAGSTAGPQQQQPAGAPQPG---AVPPGVPPPGPHGPSP 1081
+P +G+ PP P PG PP PPP P P P
Sbjct: 588 LPGDSGTIIPP-------------------------PPAPGDSTTPPPPPPPPPPPPPLP 622
Query: 1082 FPNQQTPPSMMPGAVPGSGHPGVADPGTPLPPDPT-----APSP-----GTVTPVPPP 1129
+ P +PG S P ++ T PP P PSP GT P PPP
Sbjct: 623 GGVCISSPPSLPGGTAISPPPPLSGDATIPPPPPLPEGVGIPSPSSLPGGTAIPPPPP 680
Score = 30.4 bits (67), Expect = 9.9
Identities = 16/37 (43%), Positives = 17/37 (45%), Gaps = 2/37 (5%)
Query: 992 PPPALP--PGSQPIPPTGAAGPPAVHGLAVAPASVVP 1026
PPP P PG P PP PP G V A V+P
Sbjct: 728 PPPPFPGGPGIPPPPPGMGMPPPPPFGFGVPAAPVLP 764
>gi|23592228 extraembryonic, spermatogenesis, homeobox 1-like [Homo
sapiens]
Length = 406
Score = 67.0 bits (162), Expect = 1e-10
Identities = 84/357 (23%), Positives = 125/357 (35%), Gaps = 33/357 (9%)
Query: 795 QATDEKKEPKEPREGGGAIEEEAKEKTSEAPKKDEEKGKEGDSEKESEKSDGDPIVDPEK 854
+ DEK GG EE + K + + G EG + + +G +PE+
Sbjct: 25 EVNDEKLTVTSLMARGGEDEENTRSKPEYGTEAENNVGTEGSVPSDDQDREGGGGHEPEQ 84
Query: 855 EKE------PKEGQEE--VLKEVVESEGERKTKVERDIGEGNLSTAAAAALAAAAVKAKH 906
++E P++ QEE +L+ E E +T VE TA K +
Sbjct: 85 QQEEPPLTKPEQQQEEPPLLELKQEQEEPPQTTVEGPQPAEGPQTAEGPQPPER--KRRR 142
Query: 907 LAAVEERKIKSLVALLVETQM------KKLEIKLRHFEELETIMDREREALEYQRQQLLA 960
A + +++ L E+Q ++L +L E+ + + R A + Q++L
Sbjct: 143 RTAFTQFQLQELENFFDESQYPDVVARERLAARLNLTEDRVQVWFQNRRAKWKRNQRVLM 202
Query: 961 DRQAFHMEQLKYAEMRARQQHFQQ--------MHQQQQQP-PPALPPGSQPIPPTGAAGP 1011
R + +M ++ +H Q P PP LP P P P
Sbjct: 203 LRNTATADLAHPLDMFLGGAYYAAPALDPALCVHLVPQLPRPPVLPVPPMPPRPPMVPMP 262
Query: 1012 PAVHGLAVAPASVVPAPAGSGAPPGSLGPSEQIGQAGSTAGPQQQQPAGAPQPGAVPPGV 1071
P + P + P P GS P GP P P AP P P
Sbjct: 263 PRPPIAPMPP--MAPVPPGSRMAPVPPGPRMAPVPPWPPMAPVPPWPPMAPVPTGPPMAP 320
Query: 1072 PPPGPHGPSPFPNQQTPPSMMPGAVPGSGHPGVADPGTPLPPDPTAPSPGTVTPVPP 1128
PPGP P + PP VP PG P+ P P P + P PP
Sbjct: 321 VPPGP------PMARVPPGPPMARVPPGPPMAPLPPGPPMAPLPPGPPMAPLPPGPP 371
>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapiens]
Length = 1124
Score = 65.9 bits (159), Expect = 2e-10
Identities = 53/166 (31%), Positives = 62/166 (37%), Gaps = 35/166 (21%)
Query: 991 QPPPALPPGSQPIPPTGAAGPPAVHGLAV----APASVVPAP------------------ 1028
Q PP+ PP S P+ P P A + LAV AP S P+P
Sbjct: 631 QAPPS-PPASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSPSA 689
Query: 1029 -AGSGAPPGSLGPSEQI---GQAGSTAGPQQQQPAGAPQPGAVPPGVPPPGPHGPSPFPN 1084
S APP P Q+ A P P AP P A PP PP P P
Sbjct: 690 TPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQVPPSPPASPPMSP 749
Query: 1085 QQTPPSMMPGAVPGSGHPGVADPGTPLPPDPTAPSPGTVTPVPPPQ 1130
TPP +P P +A P +PP P A P + PPPQ
Sbjct: 750 SATPPPRVP--------PLLAAPPLQVPPSPPASLPMSPLAKPPPQ 787
Score = 59.7 bits (143), Expect = 2e-08
Identities = 46/140 (32%), Positives = 57/140 (40%), Gaps = 14/140 (10%)
Query: 991 QPPPALPPGSQPIPPTGAAGPPAVHGLAVAPASVVPAPAGSGAPPGSLGPSEQIGQAGST 1050
Q PP+ PP S P+ P+ P A LA P V P+P S PP S S
Sbjct: 705 QVPPS-PPASPPMSPSATPPPQAPPPLAAPPLQVPPSPPAS--PPMS----------PSA 751
Query: 1051 AGPQQQQPAGAPQPGAVPPGVPPPGPHGPSPFPNQQTPPSMMPGAVPGSGHPGVADPGTP 1110
P + P A P VPP P P P P Q PP++ + P + PG
Sbjct: 752 TPPPRVPPLLAAPPLQVPPSPPASLPMSPLAKPPPQAPPALATPPLQALPSPPASFPG-Q 810
Query: 1111 LPPDPTAPSPGTVTPVPPPQ 1130
P P+A P + PPPQ
Sbjct: 811 APFSPSASLPMSPLATPPPQ 830
Score = 54.3 bits (129), Expect = 6e-07
Identities = 49/141 (34%), Positives = 57/141 (40%), Gaps = 19/141 (13%)
Query: 991 QPPPALPPGSQPIPPTGAAGPPAVHGLAVAPASVVPAPAGSGAPPGSLGPSEQIGQAGST 1050
Q PP+ PP S P+ P+ A PP V L AP VP +PP SL P + +
Sbjct: 736 QVPPS-PPASPPMSPS-ATPPPRVPPLLAAPPLQVPP-----SPPASL-PMSPLAKPPPQ 787
Query: 1051 AGPQQQQP--AGAPQPGAVPPGVPPPGPHGPSPFPNQQTPPSMMPGAVPGSGHPGVADPG 1108
A P P P P A PG P P P TPP P P +A P
Sbjct: 788 APPALATPPLQALPSPPASFPGQAPFSPSASLPMSPLATPPPQAP--------PVLAAPL 839
Query: 1109 TPLPPDPTAPSPGTVTPVPPP 1129
+PP P A SP P PP
Sbjct: 840 LQVPPSPPA-SPTLQAPRRPP 859
Score = 51.6 bits (122), Expect = 4e-06
Identities = 41/137 (29%), Positives = 53/137 (38%), Gaps = 8/137 (5%)
Query: 991 QPPPALPPGSQPIPPTGAAGPPAVHGLAVAPASVVPAPAGSGAPPGSLGPSEQIGQAGST 1050
Q PP+ PP S P+ P P A LA P +P+P S PS + +
Sbjct: 767 QVPPS-PPASLPMSPLAKPPPQAPPALATPPLQALPSPPASFPGQAPFSPSASLPMSPLA 825
Query: 1051 AGPQQQQPAGAPQPGAVPPGVPPPGPHGPSPFPNQQTPPSMMPGAVPGSGHPGVADPGTP 1110
P Q P A VPP PP P +P + PP+ PG P + P
Sbjct: 826 TPPPQAPPVLAAPLLQVPPS-PPASPTLQAP----RRPPT--PGPDTSVSGPRLTLALAP 878
Query: 1111 LPPDPTAPSPGTVTPVP 1127
PP P + SP + P
Sbjct: 879 GPPPPPSRSPSSTLSGP 895
Score = 50.8 bits (120), Expect = 7e-06
Identities = 48/175 (27%), Positives = 58/175 (33%), Gaps = 43/175 (24%)
Query: 991 QPPPALPPGSQPIPPTGAAGPPAVHGLAVAPASVVPAPAGSGAPPGSLGPSEQIGQAGST 1050
+ PP P PP+ PP P+S+ P APP P Q G
Sbjct: 559 ETPPCPAPCPLQAPPSPLTTPPPE-----TPSSIATPPPQ--APPALASPPLQ-GLPSPP 610
Query: 1051 AGPQQQQPAGAPQPGAVPPGVPPP----------------------------GPHGPSPF 1082
P P AP A+PP PP P P P
Sbjct: 611 LSPLATPPPQAPPXLALPPLQAPPSPPASPPLSPLATPSPQAPNALAVHLLQAPFSPPPS 670
Query: 1083 PNQQTP------PSMMPGAVPGS-GHPGVADPGTPLPPDPTAPSPGTVTPVPPPQ 1130
P Q P P + P A P S P +A P +PP P A P + + PPPQ
Sbjct: 671 PPVQAPFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQ 725
Score = 47.4 bits (111), Expect = 8e-05
Identities = 37/136 (27%), Positives = 46/136 (33%), Gaps = 1/136 (0%)
Query: 995 ALPPGSQPIPPTGAAGPPAVHGLAVAPASVVPAPAGSGAPPGSLGPSEQIGQAGSTAGPQ 1054
+L P S PP PP + ++AP + A A P P + P
Sbjct: 517 SLAPPSLQTPPASLTTPPLENLPSLAPPPLQTASAPLTTPHLETPPCPAPCPLQAPPSPL 576
Query: 1055 QQQPAGAPQPGAVPPGVPPPGPHGPSPFPNQQTPPSMMPGAVPGSGHPGVADPGTPLPPD 1114
P P A PP PP P P +PP P P +A P PP
Sbjct: 577 TTPPPETPSSIATPPPQAPPALASP-PLQGLPSPPLSPLATPPPQAPPXLALPPLQAPPS 635
Query: 1115 PTAPSPGTVTPVPPPQ 1130
P A P + P PQ
Sbjct: 636 PPASPPLSPLATPSPQ 651
Score = 47.0 bits (110), Expect = 1e-04
Identities = 41/133 (30%), Positives = 52/133 (39%), Gaps = 11/133 (8%)
Query: 1005 PTGAAGP--PAVHGL-AVAPASVVPAPAGSGAPPGSLGPSEQIGQAGSTAGPQQQQPAGA 1061
P A P P GL A+ P V P P AP +LGP A + + +P
Sbjct: 263 PRAPAHPSQPKPKGLQALRPPQVTP-PRKDAAP--ALGPLSSSPLATPSPSGTKARPVPP 319
Query: 1062 PQPGAVP-PGVPPPGPHGPSPFP----NQQTPPSMMPGAVPGSGHPGVADPGTPLPPDPT 1116
P A P P PP P +P P + PPS+ P + P A P PP
Sbjct: 320 PDNAATPLPATLPPSPPLATPLPLAPPSPSAPPSLQTLPSPPATPPSQAPPSMTTPPMQA 379
Query: 1117 APSPGTVTPVPPP 1129
PS T+ P+ P
Sbjct: 380 PPSLQTIPPIQVP 392
Score = 46.6 bits (109), Expect = 1e-04
Identities = 43/151 (28%), Positives = 55/151 (36%), Gaps = 17/151 (11%)
Query: 995 ALPPGSQPIPPTGAAGPPAVHGLAVAPASVVPAPAGSGAPP----GSLGPSE-QIGQAGS 1049
+L S P + PP ++AP S+ PA PP SL P Q A
Sbjct: 494 SLASHSPQAPLSSLIMPPLETQSSLAPPSLQTPPASLTTPPLENLPSLAPPPLQTASAPL 553
Query: 1050 TAGPQQQQPAGAPQPGAVPPG---VPPPGPHGPSPFPNQQTPPSMMPGAVPGSGHPGVAD 1106
T + P AP P PP PPP P Q PP++ + G P ++
Sbjct: 554 TTPHLETPPCPAPCPLQAPPSPLTTPPPETPSSIATPPPQAPPALASPPLQGLPSPPLSP 613
Query: 1107 PGTP---------LPPDPTAPSPGTVTPVPP 1128
TP LPP PSP P+ P
Sbjct: 614 LATPPPQAPPXLALPPLQAPPSPPASPPLSP 644
Score = 40.8 bits (94), Expect = 0.007
Identities = 41/150 (27%), Positives = 59/150 (39%), Gaps = 21/150 (14%)
Query: 994 PALPPGSQPIPPTGAAGPPAVHGLAVAPASVVPAPAGSGAPPGSLGPSEQIGQAGS-TAG 1052
P PP P P T +GP LA+AP P P S +P +L + G + S T+
Sbjct: 855 PRRPP--TPGPDTSVSGPRLT--LALAPG---PPPPPSRSPSSTLSGPDLAGHSSSATST 907
Query: 1053 PQQQQPAGAPQPGAVPPGVPPPGPHG---PSPFPNQQTPPSMMPGAV------PGSGHPG 1103
P++ + + G PP P+ + PP GA P + PG
Sbjct: 908 PEELRGYDSGPEGGAAASPPPDAELAACHPAAWSRGPAPPLAFRGAPGAPLPWPPATGPG 967
Query: 1104 VADPGTPL----PPDPTAPSPGTVTPVPPP 1129
AD + P+ P+PG + P P P
Sbjct: 968 SADGLCTIYETEGPESATPAPGALDPGPSP 997
Score = 40.0 bits (92), Expect = 0.013
Identities = 35/121 (28%), Positives = 47/121 (38%), Gaps = 4/121 (3%)
Query: 1009 AGPPAVHGLAVAPASVVPAPAGSGAPPGSLGPS--EQIGQAGSTAGPQQQQPAGAPQPGA 1066
AG A A AP + P P GS PP + P+ +G AG+ + AG
Sbjct: 10 AGAAARTPAARAPGLLTPRPPGSPRPPPPVTPAALRVLGAAGAVGRKPLAERAGGIGGAT 69
Query: 1067 VPPGVPPPGPHGPSPFPNQQTPPSMMPGAVPGSGHPGVADPGTPLPPDPTAPSPGTVTPV 1126
+P P GP S + + P S P + G P A +P P + GT P
Sbjct: 70 IPESAPRAGP-TRSAGTSSRNPASRPPASGRGERAP-PAKNTSPGPVSSPGRASGTTRPG 127
Query: 1127 P 1127
P
Sbjct: 128 P 128
Score = 39.3 bits (90), Expect = 0.021
Identities = 37/123 (30%), Positives = 43/123 (34%), Gaps = 29/123 (23%)
Query: 1000 SQPIPPTGAAGPPAVHGLAVAPASVVPAPAGSGAPPGSLGPSEQIGQAGSTAGPQQQQPA 1059
++P+PP A P L +P P P APP P P Q
Sbjct: 314 ARPVPPPDNAATPLPATLPPSPPLATPLPL---APPSPSAP------------PSLQT-- 356
Query: 1060 GAPQPGAVPPGVPPPGPHGPSPFPNQQTPPSMM---PGAVPGSGHPGVADPGTPLPPDPT 1116
P P A PP PP P Q PPS+ P VP S + P PP P
Sbjct: 357 -LPSPPATPPSQAPPS----MTTPPMQAPPSLQTIPPIQVPHS----LTSPSLQAPPSPL 407
Query: 1117 APS 1119
A S
Sbjct: 408 ALS 410
Score = 32.0 bits (71), Expect = 3.4
Identities = 33/107 (30%), Positives = 41/107 (38%), Gaps = 8/107 (7%)
Query: 997 PPGSQPIPPTGAAGPPAVHGLAVAPASVVPAPAGSGAPPGSLGPSEQIGQAGSTAGPQQQ 1056
PPGS PP P A+ L A A V P A G +G I ++ AGP +
Sbjct: 29 PPGSPRPPP--PVTPAALRVLGAAGA-VGRKPLAERA--GGIG-GATIPESAPRAGPTRS 82
Query: 1057 QPAGAPQPGAVPPGVPPPGPHGPSPFPNQQTPPSMMPGAVPGSGHPG 1103
+ P + PP G P P N P PG G+ PG
Sbjct: 83 AGTSSRNPASRPP-ASGRGERAP-PAKNTSPGPVSSPGRASGTTRPG 127
>gi|146134388 YLP motif containing 1 [Homo sapiens]
Length = 2146
Score = 65.9 bits (159), Expect = 2e-10
Identities = 85/347 (24%), Positives = 131/347 (37%), Gaps = 55/347 (15%)
Query: 820 KTSEAPKKDEEKGKEGDSEKESEKSDGDPIVDPEKEKEPKEGQEEVLKEVVESEGERKTK 879
K + P K+E ES S+ P+ P +E P EE E E + K +
Sbjct: 324 KDTPEPVKEEVTVPATSQVPESPSSEEPPLPPPNEEVPPPLPPEEPQSEDPEEDARLK-Q 382
Query: 880 VERDIGEGNLSTAAAAALAAAAVKAKHLAAVEE-RKIKSLVALLVETQMKKLEIKLRHFE 938
++ + KH + ++ + ++ Q ++++LRH+E
Sbjct: 383 LQAAAAHWQQHQQHRVGFQYQGIMQKHTQLQQILQQYQQIIQPPPHIQTMSVDMQLRHYE 442
Query: 939 ELETIMDREREALEYQRQQLLADRQAF---HMEQLKYAE---------MRARQQH----- 981
+ + E++R+ L + Q H +QL+ E M+A Q +
Sbjct: 443 MQQQQFQHLYQ--EWEREFQLWEEQLHSYPHKDQLQEYEKQWKTWQGHMKATQSYLQEKV 500
Query: 982 --FQQMHQQ----QQQPPPALPPGSQPIP-PTGAAGPPAVHGLAVAPASVVPAPAGSGAP 1034
FQ M Q PPP +P P P PT PP V ++ P + PA + P
Sbjct: 501 NSFQNMKNQYMGNMSMPPPFVPYSQMPPPLPTM---PPPVLPPSLPPPVMPPALPATVPP 557
Query: 1035 PG-----------SLGPSEQIGQAGSTAGPQQQQPAGAPQPGAVPPGVPPPGPHGPSPFP 1083
PG + P + + S+AGP P + PP +PPP +P P
Sbjct: 558 PGMPPPVMPPSLPTSVPPPGMPPSLSSAGPPPVLPPPSLSSAGPPPVLPPPSLSSTAPPP 617
Query: 1084 NQQTPPSMMPGAVPGSGHPGVADPGTP--LPPDPTAPSPGTVTPVPP 1128
PP + A P PG+ PG P +PP TA PVPP
Sbjct: 618 VMPLPP--LSSATP---PPGIPPPGVPQGIPPQLTA------APVPP 653
Score = 47.8 bits (112), Expect = 6e-05
Identities = 52/167 (31%), Positives = 62/167 (37%), Gaps = 36/167 (21%)
Query: 977 ARQQHFQQMHQQQQQ---------PPPALPPGSQPIPPTGAAGPPAVHGLAVAPASVVPA 1027
A+ Q QQMHQ+Q Q PPP PP P+ P G G P
Sbjct: 59 AQLQQLQQMHQKQMQCVLQPHHLPPPPLPPP---PVMPGGGYG------------DWQPP 103
Query: 1028 PAGSGAPPG-SLGPSEQIGQAGSTAGPQQQQPAG-APQPGAVPPGVP--PPGPHGP---S 1080
P PPG +L +Q Q+ P G P PP P PPG + P S
Sbjct: 104 PPPMPPPPGPALSYQKQQQYKHQMLHHQRDGPPGLVPMELESPPESPPVPPGSYMPPSQS 163
Query: 1081 PFPNQQTPPSMMPGAVPGSGHPGVADPGTPLPPDPTAPSPGTVTPVP 1127
P Q PPS P P S P + P P + PS + P P
Sbjct: 164 YMPPPQPPPSYYP---PTSSQPYL--PPAQPSPSQSPPSQSYLAPTP 205
Score = 45.1 bits (105), Expect = 4e-04
Identities = 48/157 (30%), Positives = 61/157 (38%), Gaps = 24/157 (15%)
Query: 978 RQQHFQQMHQQQQQPPPAL-------PPGSQPIPPTGAAGPPAVHGLAVAPASVVPAPAG 1030
+QQ+ QM Q+ PP L PP S P+PP G+ PP+ + P P
Sbjct: 120 QQQYKHQMLHHQRDGPPGLVPMELESPPESPPVPP-GSYMPPSQSYMP------PPQPPP 172
Query: 1031 SGAPPGSLGPSEQIGQ-AGSTAGPQQQQPAGAPQPGAVPPGVPPPGPHGPSPFPNQQTPP 1089
S PP S P Q + S + P Q A P + H S P+ Q P
Sbjct: 173 SYYPPTSSQPYLPPAQPSPSQSPPSQSYLAPTPSYSSSSSSSQSYLSHSQSYLPSSQASP 232
Query: 1090 SMMPGAVPGSGHPGVADPGTPLPPDPTAPSPGTVTPV 1126
S P GH + PP P+AP PG T V
Sbjct: 233 SR-----PSQGH---SKSQLLAPPPPSAP-PGNKTTV 260
Score = 44.7 bits (104), Expect = 5e-04
Identities = 46/155 (29%), Positives = 60/155 (38%), Gaps = 24/155 (15%)
Query: 992 PPPALPPGSQPIPPTGAAGPPAVHGL-----AVAPASVVPAPAGSGAPPG-SLGPSEQIG 1045
PPP LPP P + PP V L A P + P G PP + P
Sbjct: 601 PPPVLPP-----PSLSSTAPPPVMPLPPLSSATPPPGIPPPGVPQGIPPQLTAAPVPPAS 655
Query: 1046 QAGSTAGPQQQQPAGAPQP---GAVPPGV--PPPGPHGPSPFPNQQTP--PSMMP----G 1094
+ S+ P++ +PA P P G+ PP PP GPS N + P S +P
Sbjct: 656 SSQSSQVPEKPRPALLPTPVSFGSAPPTTYHPPLQSAGPSEQVNSKAPLSKSALPYSSFS 715
Query: 1095 AVPGSGHPGVADPGTPLPPDPTAP-SPGTVTPVPP 1128
+ G G A P P+ P G + P PP
Sbjct: 716 SDQGLGESSAA-PSQPITAVKDMPVRSGGLLPDPP 749
Score = 44.3 bits (103), Expect = 7e-04
Identities = 46/165 (27%), Positives = 57/165 (34%), Gaps = 36/165 (21%)
Query: 992 PPPALPPGSQPIPPTGAAGPPAVHGLAVAPASVVPAPAGSGAPPGSLGPSEQIGQAGSTA 1051
PPP +PP P A P A G + ++ AP+ SG Q+ Q
Sbjct: 15 PPPPVPP------PPPVALPEASPGPGYSSSTTPAAPSSSGFMSFREQHLAQLQQLQQMH 68
Query: 1052 GPQQQ---QPAGAPQPGAVPPGVPPPGPHGPSPFPNQQTPPSMMPGAVPG---------- 1098
Q Q QP P P PP V P G +G Q PP M P P
Sbjct: 69 QKQMQCVLQPHHLPPPPLPPPPVMPGGGYGDW----QPPPPPMPPPPGPALSYQKQQQYK 124
Query: 1099 --------SGHPGVADPGTPLPPDPTAPSPGTVTP-----VPPPQ 1130
G PG+ PP+ PG+ P +PPPQ
Sbjct: 125 HQMLHHQRDGPPGLVPMELESPPESPPVPPGSYMPPSQSYMPPPQ 169
Score = 40.8 bits (94), Expect = 0.007
Identities = 26/68 (38%), Positives = 30/68 (44%), Gaps = 8/68 (11%)
Query: 1062 PQPGAVPPGVPPPGPHGPSPFPNQQTPPSMMPGAVPGSGHPGVADPGTPLPPDPTAPSPG 1121
P P +PPP P P P PP +MP A+P + V PG P P P P
Sbjct: 517 PPPFVPYSQMPPPLPTMPPPVLPPSLPPPVMPPALPAT----VPPPGMPPPVMP----PS 568
Query: 1122 TVTPVPPP 1129
T VPPP
Sbjct: 569 LPTSVPPP 576
Score = 40.8 bits (94), Expect = 0.007
Identities = 25/63 (39%), Positives = 32/63 (50%), Gaps = 9/63 (14%)
Query: 1069 PGV-PPPGPHGPSPFPNQQTPPSMM-PGAVPGSGHPGVADPGTPLPPDPTAPSPGTVTPV 1126
PG+ PPPG + P P P + P S++ P A P V P P+PP P P P+
Sbjct: 1503 PGMYPPPGSYRPPP-PMGKPPGSIVRPSAPPARSSVPVTRPPVPIPPPPPPP------PL 1555
Query: 1127 PPP 1129
PPP
Sbjct: 1556 PPP 1558
Score = 38.1 bits (87), Expect = 0.048
Identities = 48/185 (25%), Positives = 71/185 (38%), Gaps = 24/185 (12%)
Query: 958 LLADRQAFHMEQLKYAE----MRARQQHFQQMHQQQQQPPPA--LPPGSQPIPPTGAAGP 1011
+L+ RQ H LK A+ +R +++ Q+M +P A LPP + T +
Sbjct: 1447 VLSQRQ--HEIILKAAQELKMLREQKEQLQKMKDFGSEPQMADHLPPQESRLQNTSSRP- 1503
Query: 1012 PAVHGLAVAPASVVPAPAGSGAPPGSL-GPSEQIGQAGSTAGPQQQQPAGAPQPGAVPPG 1070
G+ P S P P G PPGS+ PS ++ P + P P P PP
Sbjct: 1504 ----GMYPPPGSYRPPPP-MGKPPGSIVRPS---APPARSSVPVTRPPVPIPPPPPPPPL 1555
Query: 1071 VPPPGPHGP--SPFPNQQTPPSMMPGAVPGSGHPGV----ADPGTPLPPDPTAPSPGTVT 1124
PPP P S ++ G + G+ +P P P P +
Sbjct: 1556 PPPPPVIKPQTSAVEQERWDEDSFYGLWDTNDEQGLNSEFKSETAAIPSAPVLPPPPVHS 1615
Query: 1125 PVPPP 1129
+PPP
Sbjct: 1616 SIPPP 1620
Score = 35.4 bits (80), Expect = 0.31
Identities = 44/201 (21%), Positives = 74/201 (36%), Gaps = 40/201 (19%)
Query: 931 EIKLRHFEELETIMDREREALEYQRQQLLADRQAFHM--EQLKYAEMRARQQHFQQMHQQ 988
EI L+ +EL+ + + ++E L+ + + A H+ ++ + +R +
Sbjct: 1454 EIILKAAQELKMLRE-QKEQLQKMKDFGSEPQMADHLPPQESRLQNTSSRPGMYPPPGSY 1512
Query: 989 QQQPPPALPPGSQPIPPTGAAGPPAVHGLAVAPASVVPAPAGSGAPPGSLGPSEQIGQAG 1048
+ PP PPGS P + PPA + P + P P PP L P + +
Sbjct: 1513 RPPPPMGKPPGSIVRP----SAPPARSSV---PVTRPPVPIPPPPPPPPLPPPPPVIKPQ 1565
Query: 1049 STAGPQQQ------------------------QPAGAPQPGAVPP-----GVPPPGPHGP 1079
++A Q++ + A P +PP +PPPGP P
Sbjct: 1566 TSAVEQERWDEDSFYGLWDTNDEQGLNSEFKSETAAIPSAPVLPPPPVHSSIPPPGP-VP 1624
Query: 1080 SPFPNQQTPPSMMPGAVPGSG 1100
P PP + G G
Sbjct: 1625 MGMPPMSKPPPVQQTVDYGHG 1645
Score = 33.1 bits (74), Expect = 1.5
Identities = 47/198 (23%), Positives = 65/198 (32%), Gaps = 55/198 (27%)
Query: 984 QMHQQQQQPPPAL-PPGSQ-----PIPPTGAAGPPAVHGLAVAPA--------------- 1022
Q + QPPP+ PP S P P+ + PP+ LA P+
Sbjct: 162 QSYMPPPQPPPSYYPPTSSQPYLPPAQPSPSQSPPSQSYLAPTPSYSSSSSSSQSYLSHS 221
Query: 1023 --------------------SVVPAPAGSGAPPGSLGPSEQ--IGQAGSTAGPQQQQPAG 1060
S + AP APPG+ +Q + +QQQ A
Sbjct: 222 QSYLPSSQASPSRPSQGHSKSQLLAPPPPSAPPGNKTTVQQEPLESGAKNKSTEQQQAAP 281
Query: 1061 APQPGAVPPGVPPPGPHGPSPFPNQQTPPSMMPGAVPGSGHPGVA-DPGTPLPPDPTAPS 1119
P P + P + QQ +PG G P VA D P+ + T P+
Sbjct: 282 EPDPSTMTPQEQQQYWYRQHLLSLQQRTKVHLPGHKKG---PVVAKDTPEPVKEEVTVPA 338
Query: 1120 PGTV--------TPVPPP 1129
V P+PPP
Sbjct: 339 TSQVPESPSSEEPPLPPP 356
>gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens]
Length = 538
Score = 65.9 bits (159), Expect = 2e-10
Identities = 74/253 (29%), Positives = 95/253 (37%), Gaps = 47/253 (18%)
Query: 891 TAAAAALAAAAVKAKHLAAVEERKIKSLVALLVETQMKKLE-----IKLRHFEELETIMD 945
TAAAA AAAA + +E + ++ +L LE ++ RH E E
Sbjct: 12 TAAAATTAAAASSSAASPHYQEWILDTIDSLRSRKARPDLERICRMVRRRHGPEPE---- 67
Query: 946 REREALEYQRQQLLADRQAFHMEQLKYAEMRARQQHFQQMHQQQQQPPPALPPGSQPI-- 1003
R R LE QQ R ++ K + Q + P P P P
Sbjct: 68 RTRAELEKLIQQRAVLRVSY-----KGSISYRNAARVQPPRRGATPPAPPRAPRGAPAAA 122
Query: 1004 -----PPTGAAGPPAVHGLAVAPASVVPAPAGSGAPPGSLGPSEQIGQAGSTAGPQQQQP 1058
PPT A PP A APA A A + P S GP++ GP+ Q+
Sbjct: 123 AAAAPPPTPAPPPPPAPVAAAAPARAPRAAAAAATAPPSPGPAQP--------GPRAQR- 173
Query: 1059 AGAPQPGAVPPGVPPPGPHGPSPFPNQQTPPSMMPGAVP-GSGHPGVADPGTPLPPDPTA 1117
A P PPP P PP++ P A P + P VA PLPP P
Sbjct: 174 -------AAPLAAPPPAP---------AAPPAVAPPAGPRRAPPPAVAAREPPLPPPPQP 217
Query: 1118 PSPGTVTPVPPPQ 1130
P+P PPPQ
Sbjct: 218 PAPPQQQQPPPPQ 230
>gi|4557317 annexin A11 [Homo sapiens]
Length = 505
Score = 65.1 bits (157), Expect = 4e-10
Identities = 49/128 (38%), Positives = 55/128 (42%), Gaps = 14/128 (10%)
Query: 1007 GAAGPPAVHGLAVAPASVVPAPAGSGAPPGSLGPSEQIGQAGSTAG-PQQQQPAGAPQPG 1065
GA P G A VP P G G PP + P G G P + P+ P PG
Sbjct: 67 GANMPNLYPGAPGAGYPPVP-PGGFGQPPSAQQPVPPYGMYPPPGGNPPSRMPSYPPYPG 125
Query: 1066 AVPPG--VPPPGPHGPSPFPNQQTPPSMMPGAVPGSGHPGVADPG--TPLPPDPTAPSPG 1121
A PG +PPPG P +P Q PP P G P V PG P+P P P G
Sbjct: 126 APVPGQPMPPPGQQPPGAYPGQ--PPVTYP------GQPPVPLPGQQQPVPSYPGYPGSG 177
Query: 1122 TVTPVPPP 1129
TVTP PP
Sbjct: 178 TVTPAVPP 185
Score = 57.0 bits (136), Expect = 1e-07
Identities = 50/137 (36%), Positives = 56/137 (40%), Gaps = 15/137 (10%)
Query: 993 PPALPPGSQPIPPTGAAGPPAVHGLAVAPASVVPAPAGSGAPPGSLGPSEQIGQAGSTAG 1052
P A G P+PP G PP+ V P + P P G+ P S PS G+
Sbjct: 75 PGAPGAGYPPVPPGGFGQPPSAQQ-PVPPYGMYPPPGGN---PPSRMPSYP-PYPGAPVP 129
Query: 1053 PQQQQPAGAPQPGAVP--PGVPPPGPHGPSPFPNQQTPPSMMPGAVPGSGHPGVADPGTP 1110
Q P G PGA P P V PG P P P QQ P PG PGSG TP
Sbjct: 130 GQPMPPPGQQPPGAYPGQPPVTYPG-QPPVPLPGQQQPVPSYPG-YPGSG------TVTP 181
Query: 1111 LPPDPTAPSPGTVTPVP 1127
P S GT+T P
Sbjct: 182 AVPPTQFGSRGTITDAP 198
Score = 48.1 bits (113), Expect = 5e-05
Identities = 45/142 (31%), Positives = 50/142 (35%), Gaps = 15/142 (10%)
Query: 994 PALPPGSQPIPPTGAAGPPAVHGLAVAPASVVPAPAGSGAP-PGSLGPSEQIGQAGSTAG 1052
P PP PP G P P S+ P + A G G A + +G
Sbjct: 4 PGYPPPPGGYPPAAPGGGPWGGAAYPPPPSMPPIGLDNVATYAGQFNQDYLSGMAANMSG 63
Query: 1053 PQQQQPAGAPQPGAVPPGVPP--PGPHGPSPFPNQQTPPSMM---PGAVPGSGHPGVADP 1107
PGA G PP PG G P Q PP M PG P S P
Sbjct: 64 TFGGANMPNLYPGAPGAGYPPVPPGGFGQPPSAQQPVPPYGMYPPPGGNPPSRMPSY--- 120
Query: 1108 GTPLPPDPTAPSPGTVTPVPPP 1129
PP P AP PG P+PPP
Sbjct: 121 ----PPYPGAPVPG--QPMPPP 136
Score = 48.1 bits (113), Expect = 5e-05
Identities = 48/151 (31%), Positives = 56/151 (37%), Gaps = 24/151 (15%)
Query: 992 PPPALPPGSQPIPPTGAAGPPAVHGLAVAPASVVPAPAG--------------SGAPPGS 1037
PP PP + P G A P + V AG SG G+
Sbjct: 9 PPGGYPPAAPGGGPWGGAAYPPPPSMPPIGLDNVATYAGQFNQDYLSGMAANMSGTFGGA 68
Query: 1038 LGPSEQIGQAGSTAGPQQQQPAGAPQPGAVPPGVPPPGPHGPSPFPNQQTPPSMMPGAVP 1097
P+ G G AG P G QP + VPP G + P P N PPS MP P
Sbjct: 69 NMPNLYPGAPG--AGYPPVPPGGFGQPPSAQQPVPPYGMY-PPPGGN---PPSRMPSYPP 122
Query: 1098 GSGHPGVADPGTPLPPDPTAPSPGTVTPVPP 1128
+PG PG P+PP P PG PP
Sbjct: 123 ---YPGAPVPGQPMPP-PGQQPPGAYPGQPP 149
>gi|22165433 annexin A11 [Homo sapiens]
Length = 505
Score = 65.1 bits (157), Expect = 4e-10
Identities = 49/128 (38%), Positives = 55/128 (42%), Gaps = 14/128 (10%)
Query: 1007 GAAGPPAVHGLAVAPASVVPAPAGSGAPPGSLGPSEQIGQAGSTAG-PQQQQPAGAPQPG 1065
GA P G A VP P G G PP + P G G P + P+ P PG
Sbjct: 67 GANMPNLYPGAPGAGYPPVP-PGGFGQPPSAQQPVPPYGMYPPPGGNPPSRMPSYPPYPG 125
Query: 1066 AVPPG--VPPPGPHGPSPFPNQQTPPSMMPGAVPGSGHPGVADPG--TPLPPDPTAPSPG 1121
A PG +PPPG P +P Q PP P G P V PG P+P P P G
Sbjct: 126 APVPGQPMPPPGQQPPGAYPGQ--PPVTYP------GQPPVPLPGQQQPVPSYPGYPGSG 177
Query: 1122 TVTPVPPP 1129
TVTP PP
Sbjct: 178 TVTPAVPP 185
Score = 57.0 bits (136), Expect = 1e-07
Identities = 50/137 (36%), Positives = 56/137 (40%), Gaps = 15/137 (10%)
Query: 993 PPALPPGSQPIPPTGAAGPPAVHGLAVAPASVVPAPAGSGAPPGSLGPSEQIGQAGSTAG 1052
P A G P+PP G PP+ V P + P P G+ P S PS G+
Sbjct: 75 PGAPGAGYPPVPPGGFGQPPSAQQ-PVPPYGMYPPPGGN---PPSRMPSYP-PYPGAPVP 129
Query: 1053 PQQQQPAGAPQPGAVP--PGVPPPGPHGPSPFPNQQTPPSMMPGAVPGSGHPGVADPGTP 1110
Q P G PGA P P V PG P P P QQ P PG PGSG TP
Sbjct: 130 GQPMPPPGQQPPGAYPGQPPVTYPG-QPPVPLPGQQQPVPSYPG-YPGSG------TVTP 181
Query: 1111 LPPDPTAPSPGTVTPVP 1127
P S GT+T P
Sbjct: 182 AVPPTQFGSRGTITDAP 198
Score = 48.1 bits (113), Expect = 5e-05
Identities = 45/142 (31%), Positives = 50/142 (35%), Gaps = 15/142 (10%)
Query: 994 PALPPGSQPIPPTGAAGPPAVHGLAVAPASVVPAPAGSGAP-PGSLGPSEQIGQAGSTAG 1052
P PP PP G P P S+ P + A G G A + +G
Sbjct: 4 PGYPPPPGGYPPAAPGGGPWGGAAYPPPPSMPPIGLDNVATYAGQFNQDYLSGMAANMSG 63
Query: 1053 PQQQQPAGAPQPGAVPPGVPP--PGPHGPSPFPNQQTPPSMM---PGAVPGSGHPGVADP 1107
PGA G PP PG G P Q PP M PG P S P
Sbjct: 64 TFGGANMPNLYPGAPGAGYPPVPPGGFGQPPSAQQPVPPYGMYPPPGGNPPSRMPSY--- 120
Query: 1108 GTPLPPDPTAPSPGTVTPVPPP 1129
PP P AP PG P+PPP
Sbjct: 121 ----PPYPGAPVPG--QPMPPP 136
Score = 48.1 bits (113), Expect = 5e-05
Identities = 48/151 (31%), Positives = 56/151 (37%), Gaps = 24/151 (15%)
Query: 992 PPPALPPGSQPIPPTGAAGPPAVHGLAVAPASVVPAPAG--------------SGAPPGS 1037
PP PP + P G A P + V AG SG G+
Sbjct: 9 PPGGYPPAAPGGGPWGGAAYPPPPSMPPIGLDNVATYAGQFNQDYLSGMAANMSGTFGGA 68
Query: 1038 LGPSEQIGQAGSTAGPQQQQPAGAPQPGAVPPGVPPPGPHGPSPFPNQQTPPSMMPGAVP 1097
P+ G G AG P G QP + VPP G + P P N PPS MP P
Sbjct: 69 NMPNLYPGAPG--AGYPPVPPGGFGQPPSAQQPVPPYGMY-PPPGGN---PPSRMPSYPP 122
Query: 1098 GSGHPGVADPGTPLPPDPTAPSPGTVTPVPP 1128
+PG PG P+PP P PG PP
Sbjct: 123 ---YPGAPVPGQPMPP-PGQQPPGAYPGQPP 149
>gi|22165431 annexin A11 [Homo sapiens]
Length = 505
Score = 65.1 bits (157), Expect = 4e-10
Identities = 49/128 (38%), Positives = 55/128 (42%), Gaps = 14/128 (10%)
Query: 1007 GAAGPPAVHGLAVAPASVVPAPAGSGAPPGSLGPSEQIGQAGSTAG-PQQQQPAGAPQPG 1065
GA P G A VP P G G PP + P G G P + P+ P PG
Sbjct: 67 GANMPNLYPGAPGAGYPPVP-PGGFGQPPSAQQPVPPYGMYPPPGGNPPSRMPSYPPYPG 125
Query: 1066 AVPPG--VPPPGPHGPSPFPNQQTPPSMMPGAVPGSGHPGVADPG--TPLPPDPTAPSPG 1121
A PG +PPPG P +P Q PP P G P V PG P+P P P G
Sbjct: 126 APVPGQPMPPPGQQPPGAYPGQ--PPVTYP------GQPPVPLPGQQQPVPSYPGYPGSG 177
Query: 1122 TVTPVPPP 1129
TVTP PP
Sbjct: 178 TVTPAVPP 185
Score = 57.0 bits (136), Expect = 1e-07
Identities = 50/137 (36%), Positives = 56/137 (40%), Gaps = 15/137 (10%)
Query: 993 PPALPPGSQPIPPTGAAGPPAVHGLAVAPASVVPAPAGSGAPPGSLGPSEQIGQAGSTAG 1052
P A G P+PP G PP+ V P + P P G+ P S PS G+
Sbjct: 75 PGAPGAGYPPVPPGGFGQPPSAQQ-PVPPYGMYPPPGGN---PPSRMPSYP-PYPGAPVP 129
Query: 1053 PQQQQPAGAPQPGAVP--PGVPPPGPHGPSPFPNQQTPPSMMPGAVPGSGHPGVADPGTP 1110
Q P G PGA P P V PG P P P QQ P PG PGSG TP
Sbjct: 130 GQPMPPPGQQPPGAYPGQPPVTYPG-QPPVPLPGQQQPVPSYPG-YPGSG------TVTP 181
Query: 1111 LPPDPTAPSPGTVTPVP 1127
P S GT+T P
Sbjct: 182 AVPPTQFGSRGTITDAP 198
Score = 48.1 bits (113), Expect = 5e-05
Identities = 45/142 (31%), Positives = 50/142 (35%), Gaps = 15/142 (10%)
Query: 994 PALPPGSQPIPPTGAAGPPAVHGLAVAPASVVPAPAGSGAP-PGSLGPSEQIGQAGSTAG 1052
P PP PP G P P S+ P + A G G A + +G
Sbjct: 4 PGYPPPPGGYPPAAPGGGPWGGAAYPPPPSMPPIGLDNVATYAGQFNQDYLSGMAANMSG 63
Query: 1053 PQQQQPAGAPQPGAVPPGVPP--PGPHGPSPFPNQQTPPSMM---PGAVPGSGHPGVADP 1107
PGA G PP PG G P Q PP M PG P S P
Sbjct: 64 TFGGANMPNLYPGAPGAGYPPVPPGGFGQPPSAQQPVPPYGMYPPPGGNPPSRMPSY--- 120
Query: 1108 GTPLPPDPTAPSPGTVTPVPPP 1129
PP P AP PG P+PPP
Sbjct: 121 ----PPYPGAPVPG--QPMPPP 136
Score = 48.1 bits (113), Expect = 5e-05
Identities = 48/151 (31%), Positives = 56/151 (37%), Gaps = 24/151 (15%)
Query: 992 PPPALPPGSQPIPPTGAAGPPAVHGLAVAPASVVPAPAG--------------SGAPPGS 1037
PP PP + P G A P + V AG SG G+
Sbjct: 9 PPGGYPPAAPGGGPWGGAAYPPPPSMPPIGLDNVATYAGQFNQDYLSGMAANMSGTFGGA 68
Query: 1038 LGPSEQIGQAGSTAGPQQQQPAGAPQPGAVPPGVPPPGPHGPSPFPNQQTPPSMMPGAVP 1097
P+ G G AG P G QP + VPP G + P P N PPS MP P
Sbjct: 69 NMPNLYPGAPG--AGYPPVPPGGFGQPPSAQQPVPPYGMY-PPPGGN---PPSRMPSYPP 122
Query: 1098 GSGHPGVADPGTPLPPDPTAPSPGTVTPVPP 1128
+PG PG P+PP P PG PP
Sbjct: 123 ---YPGAPVPGQPMPP-PGQQPPGAYPGQPP 149
>gi|116256445 nuclear receptor co-repressor 2 isoform 2 [Homo sapiens]
Length = 2462
Score = 64.7 bits (156), Expect = 5e-10
Identities = 78/352 (22%), Positives = 141/352 (40%), Gaps = 41/352 (11%)
Query: 786 GNDEARVEGQATDEKKEPKEPREGGGAIEEEAKEKTSEAPKKDEEKGKEGDSEKESEKSD 845
G + + + Q ++++ ++P E++ KEK EA K++E+ E D E ++
Sbjct: 491 GKSQQQQQQQQQQQQQQQQQPMPRSSQEEKDEKEKEKEAEKEEEKPEVENDKEDLLKEKT 550
Query: 846 GDPIVDPEKEKEPKEGQEEVLKEVVESEGERKTKVERDIGEGNLSTAAAAALAAAAVKAK 905
D + EKE + ++ S+G RK ++ R +++ A + A ++
Sbjct: 551 DDTSGEDNDEKEAVASKG---RKTANSQGRRKGRITR-----SMANEANSEEAITPQQSA 602
Query: 906 HLAAVEERKIKSLVALLVETQMKKLEIKLRHFEEL------ETIMDREREALEYQRQQLL 959
LA++E + +ET K L R++ + +T+ + Y+++Q L
Sbjct: 603 ELASMELNESSRWTEEEMETAKKGLLEHGRNWSAIARMVGSKTVSQCKNFYFNYKKRQNL 662
Query: 960 AD-RQAFHMEQLKYAEMRARQQHFQQMHQQQQQPPPALPPGSQPIPPTGAAGPPAVHGLA 1018
+ Q ++ K R +++ ++ PP + + + +G +G +
Sbjct: 663 DEILQQHKLKMEKERNARRKKKKAPAAASEEAAFPPVVE--DEEMEASGVSGNEE-EMVE 719
Query: 1019 VAPASVVPAPAGSGAPPGSLGPSEQIGQAGSTAGPQQQQPAGAPQPGAVPPGVPPPGPHG 1078
A A+V + P ++ GQ GP+ GA P PPG P P P
Sbjct: 720 EAEATVNNSSDTESIPSPHTEAAKDTGQ----NGPKPPATLGADGP---PPGPPTPPPE- 771
Query: 1079 PSPFPNQQTPPSMMPGAVPGSGHPGVADPGTPLPPDPTAPSPGTVTPVPPPQ 1130
P P + TP S GA P PP P PSP PV P +
Sbjct: 772 DIPAPTEPTPASEATGA--------------PTPP-PAPPSPSAPPPVVPKE 808
Score = 60.8 bits (146), Expect = 7e-09
Identities = 135/634 (21%), Positives = 208/634 (32%), Gaps = 94/634 (14%)
Query: 545 QPKTPQGRQVDADTKAGRKGKELDDLVPETAKGKPEL----------------QTSASQQ 588
Q P+ Q + D K K E ++ PE K +L + AS+
Sbjct: 509 QQPMPRSSQEEKDEKEKEKEAEKEEEKPEVENDKEDLLKEKTDDTSGEDNDEKEAVASKG 568
Query: 589 MLNFPDKGKEK---PTDMQNFGLRTDMYTKKNVPSKSKAAASATREWTEQETLLLLEALE 645
+G+ K M N + T + + + + WTE+E + L
Sbjct: 569 RKTANSQGRRKGRITRSMANEANSEEAITPQQSAELASMELNESSRWTEEEMETAKKGLL 628
Query: 646 MYKDDWNKVSEHVGSRTQDEC---ILHFLRLPIEDPYLEDSEASLGPLAYQPIPFSQSGN 702
+ +W+ ++ VGS+T +C ++ + D L+ + + ++
Sbjct: 629 EHGRNWSAIARMVGSKTVSQCKNFYFNYKKRQNLDEILQQHKLKMEKERNARRKKKKAPA 688
Query: 703 PVMSTVAFLASVVDPRVASAAAKSALEEFSKMKEEVP--TALVEAHVRKVEEAAKVTGKA 760
AF V D + ++ EE + E ++ E+ EAAK TG+
Sbjct: 689 AASEEAAFPPVVEDEEMEASGVSGNEEEMVEEAEATVNNSSDTESIPSPHTEAAKDTGQN 748
Query: 761 DP----AFGLESSGIAGTTSDEPERIEESGNDEARVEGQATDEKKEPKEPREGGGAIEEE 816
P G + G + PE I EP E GA
Sbjct: 749 GPKPPATLGADGPP-PGPPTPPPEDIPAP---------------TEPTPASEATGAPTPP 792
Query: 817 AKEKTSEAPKKDEEKGKEGDSEKESEKSDGDPIVDPEKEKEPKEGQEEVLKEVVESEGER 876
+ AP K EKE E + P+ + E++K P EE+ + ++E
Sbjct: 793 PAPPSPSAPPPVVPK-----EEKEEETAAAPPVEEGEEQKPP--AAEELAVDTGKAEEPV 845
Query: 877 KTKVERDIGEG---NLSTAAAAALAAAAVKAKHLAAVEERKIKSLVALLVETQMKKLEIK 933
K++ + EG AA A A A+KA+ R T K
Sbjct: 846 KSECTEEAEEGPAKGKDAEAAEATAEGALKAEKKEGGSGR----------ATTAKSSGAP 895
Query: 934 LRHFEELETIMDREREALEYQRQQLLADRQAFHMEQLKYAEMRARQQHFQQMH-QQQQQP 992
D EA + +LL+ R + + RA + + +Q +Q
Sbjct: 896 QDSDSSATCSADEVDEAEGGDKNRLLSPRPSL---LTPTGDPRANASPQKPLDLKQLKQR 952
Query: 993 PPALPPGSQPIPPTGAAGPPAVHGLAVAPASVVPAPAGSGAPPGSLGPSEQIGQAGSTAG 1052
A+P PI T PP PA P P + P G +
Sbjct: 953 AAAIP----PIQVTKVHEPPREDAAPTKPAPPAPPPPQNLQPESDAPQQPGSSPRGKSRS 1008
Query: 1053 PQQQQPAGAPQPGAVP---------PGVPPPGPHGPSPFPNQQTPPSMMPGAVPGSGHPG 1103
P A +P P PG PP G PFP PP + A P + P
Sbjct: 1009 PAPPADKEAEKPVFFPAFAAEAQKLPGDPPCWTSG-LPFP---VPPREVIKASPHAPDPS 1064
Query: 1104 V---ADPGTPLP------PDPTAPSPGTVTPVPP 1128
A PG PLP P P P T++ PP
Sbjct: 1065 AFSYAPPGHPLPLGLHDTARPVLPRPPTISNPPP 1098
Score = 31.6 bits (70), Expect = 4.4
Identities = 26/102 (25%), Positives = 37/102 (36%), Gaps = 3/102 (2%)
Query: 305 PSPTPEAKKKNAKKGPSTPYTKSKRGHREEEQEDLTKDMDEPSPVPNVEEVTLPKTVNTK 364
PSP EA K + GP P T G +D+ P+ E T T
Sbjct: 735 PSPHTEAAKDTGQNGPKPPATLGADGPPPGPPTPPPEDIPAPTEPTPASEATGAPTPPPA 794
Query: 365 KDSESAPVKGGTMTDLDEQEDESMETTGKDEDENSTGNKGEQ 406
S SAP + +E+E+E+ +E E E+
Sbjct: 795 PPSPSAP---PPVVPKEEKEEETAAAPPVEEGEEQKPPAAEE 833
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.309 0.129 0.374
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 55,264,523
Number of Sequences: 37866
Number of extensions: 3581698
Number of successful extensions: 65284
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 865
Number of HSP's successfully gapped in prelim test: 2589
Number of HSP's that attempted gapping in prelim test: 21014
Number of HSP's gapped (non-prelim): 23242
length of query: 1130
length of database: 18,247,518
effective HSP length: 113
effective length of query: 1017
effective length of database: 13,968,660
effective search space: 14206127220
effective search space used: 14206127220
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 67 (30.4 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.