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Search of human proteins with 21237805
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|21237805 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin c2 isoform a [Homo sapiens]
(1214 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|21237805 SWI/SNF-related matrix-associated actin-dependent re... 2477 0.0
gi|21237808 SWI/SNF-related matrix-associated actin-dependent re... 2172 0.0
gi|194363725 SWI/SNF-related matrix-associated actin-dependent r... 2171 0.0
gi|188536047 SWI/SNF-related matrix-associated actin-dependent r... 1352 0.0
gi|160707881 formin 2 [Homo sapiens] 102 3e-21
gi|42544130 splicing factor 1 isoform 1 [Homo sapiens] 91 9e-18
gi|21361376 splicing factor 3a, subunit 2 [Homo sapiens] 90 1e-17
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 89 2e-17
gi|163965366 nascent polypeptide-associated complex alpha subuni... 88 4e-17
gi|119395760 diaphanous 1 isoform 2 [Homo sapiens] 86 3e-16
gi|119395758 diaphanous 1 isoform 1 [Homo sapiens] 86 3e-16
gi|47132519 Ras association and pleckstrin homology domains 1 is... 85 5e-16
gi|42544125 splicing factor 1 isoform 2 [Homo sapiens] 84 1e-15
gi|5032069 splicing factor 3b, subunit 4 [Homo sapiens] 82 2e-15
gi|150170670 piccolo isoform 2 [Homo sapiens] 82 2e-15
gi|150378539 piccolo isoform 1 [Homo sapiens] 82 2e-15
gi|7706501 WW domain binding protein 11 [Homo sapiens] 82 3e-15
gi|112382226 atrophin-1 like protein isoform b [Homo sapiens] 82 4e-15
gi|112382224 atrophin-1 like protein isoform a [Homo sapiens] 82 4e-15
gi|112382216 atrophin-1 like protein isoform a [Homo sapiens] 82 4e-15
gi|19718731 bromodomain-containing protein 4 isoform long [Homo ... 79 3e-14
gi|32964830 collagen, type VIII, alpha 2 [Homo sapiens] 78 6e-14
gi|4826998 splicing factor proline/glutamine rich (polypyrimidin... 78 6e-14
gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 77 8e-14
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi... 77 8e-14
gi|146134388 YLP motif containing 1 [Homo sapiens] 77 1e-13
gi|55750053 atrophin-1 [Homo sapiens] 76 2e-13
gi|55750041 atrophin-1 [Homo sapiens] 76 2e-13
gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens] 76 2e-13
gi|162329583 cleavage and polyadenylation specific factor 6, 68 ... 75 3e-13
>gi|21237805 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin c2 isoform a [Homo sapiens]
Length = 1214
Score = 2477 bits (6420), Expect = 0.0
Identities = 1214/1214 (100%), Positives = 1214/1214 (100%)
Query: 1 MAVRKKDGGPNVKYYEAADTVTQFDNVRLWLGKNYKKYIQAEPPTNKSLSSLVVQLLQFQ 60
MAVRKKDGGPNVKYYEAADTVTQFDNVRLWLGKNYKKYIQAEPPTNKSLSSLVVQLLQFQ
Sbjct: 1 MAVRKKDGGPNVKYYEAADTVTQFDNVRLWLGKNYKKYIQAEPPTNKSLSSLVVQLLQFQ 60
Query: 61 EEVFGKHVSNAPLTKLPIKCFLDFKAGGSLCHILAAAYKFKSDQGWRRYDFQNPSRMDRN 120
EEVFGKHVSNAPLTKLPIKCFLDFKAGGSLCHILAAAYKFKSDQGWRRYDFQNPSRMDRN
Sbjct: 61 EEVFGKHVSNAPLTKLPIKCFLDFKAGGSLCHILAAAYKFKSDQGWRRYDFQNPSRMDRN 120
Query: 121 VEMFMTIEKSLVQNNCLSRPNIFLCPEIEPKLLGKLKDIIKRHQGTVTEDKNNASHVVYP 180
VEMFMTIEKSLVQNNCLSRPNIFLCPEIEPKLLGKLKDIIKRHQGTVTEDKNNASHVVYP
Sbjct: 121 VEMFMTIEKSLVQNNCLSRPNIFLCPEIEPKLLGKLKDIIKRHQGTVTEDKNNASHVVYP 180
Query: 181 VPGNLEEEEWVRPVMKRDKQVLLHWGYYPDSYDTWIPASEIEASVEDAPTPEKPRKVHAK 240
VPGNLEEEEWVRPVMKRDKQVLLHWGYYPDSYDTWIPASEIEASVEDAPTPEKPRKVHAK
Sbjct: 181 VPGNLEEEEWVRPVMKRDKQVLLHWGYYPDSYDTWIPASEIEASVEDAPTPEKPRKVHAK 240
Query: 241 WILDTDTFNEWMNEEDYEVNDDKNPVSRRKKISAKTLTDEVNSPDSDRRDKKGGNYKKRK 300
WILDTDTFNEWMNEEDYEVNDDKNPVSRRKKISAKTLTDEVNSPDSDRRDKKGGNYKKRK
Sbjct: 241 WILDTDTFNEWMNEEDYEVNDDKNPVSRRKKISAKTLTDEVNSPDSDRRDKKGGNYKKRK 300
Query: 301 RSPSPSPTPEAKKKNAKKGPSTPYTKSKRGHREEEQEDLTKDMDEPSPVPNVEEVTLPKT 360
RSPSPSPTPEAKKKNAKKGPSTPYTKSKRGHREEEQEDLTKDMDEPSPVPNVEEVTLPKT
Sbjct: 301 RSPSPSPTPEAKKKNAKKGPSTPYTKSKRGHREEEQEDLTKDMDEPSPVPNVEEVTLPKT 360
Query: 361 VNTKKDSESAPVKGGTMTDLDEQEDESMETTGKDEDENSTGNKGEQTKNPDLHEDNVTEQ 420
VNTKKDSESAPVKGGTMTDLDEQEDESMETTGKDEDENSTGNKGEQTKNPDLHEDNVTEQ
Sbjct: 361 VNTKKDSESAPVKGGTMTDLDEQEDESMETTGKDEDENSTGNKGEQTKNPDLHEDNVTEQ 420
Query: 421 THHIIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEY 480
THHIIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEY
Sbjct: 421 THHIIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEY 480
Query: 481 LTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDAESRPTPMGPPPTSHFHVLADTPSG 540
LTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDAESRPTPMGPPPTSHFHVLADTPSG
Sbjct: 481 LTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDAESRPTPMGPPPTSHFHVLADTPSG 540
Query: 541 LVPLQPKTPQQTSASQQMLNFPDKGKEKPTDMQNFGLRTDMYTKKNVPSKSKAAASATRE 600
LVPLQPKTPQQTSASQQMLNFPDKGKEKPTDMQNFGLRTDMYTKKNVPSKSKAAASATRE
Sbjct: 541 LVPLQPKTPQQTSASQQMLNFPDKGKEKPTDMQNFGLRTDMYTKKNVPSKSKAAASATRE 600
Query: 601 WTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILHFLRLPIEDPYLEDSEASLGPLA 660
WTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILHFLRLPIEDPYLEDSEASLGPLA
Sbjct: 601 WTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILHFLRLPIEDPYLEDSEASLGPLA 660
Query: 661 YQPIPFSQSGNPVMSTVAFLASVVDPRVASAAAKSALEEFSKMKEEVPTALVEAHVRKVE 720
YQPIPFSQSGNPVMSTVAFLASVVDPRVASAAAKSALEEFSKMKEEVPTALVEAHVRKVE
Sbjct: 661 YQPIPFSQSGNPVMSTVAFLASVVDPRVASAAAKSALEEFSKMKEEVPTALVEAHVRKVE 720
Query: 721 EAAKVTGKADPAFGLESSGIAGTTSDEPERIEESGNDEARVEGQATDEKKEPKEPREGGG 780
EAAKVTGKADPAFGLESSGIAGTTSDEPERIEESGNDEARVEGQATDEKKEPKEPREGGG
Sbjct: 721 EAAKVTGKADPAFGLESSGIAGTTSDEPERIEESGNDEARVEGQATDEKKEPKEPREGGG 780
Query: 781 AIEEEAKEKTSEAPKKDEEKGKEGDSEKESEKSDGDPIVDPEKEKEPKEGQEEVLKEVVE 840
AIEEEAKEKTSEAPKKDEEKGKEGDSEKESEKSDGDPIVDPEKEKEPKEGQEEVLKEVVE
Sbjct: 781 AIEEEAKEKTSEAPKKDEEKGKEGDSEKESEKSDGDPIVDPEKEKEPKEGQEEVLKEVVE 840
Query: 841 SEGERKTKVERDIGEGNLSTAAAAALAAAAVKAKHLAAVEERKIKSLVALLVETQMKKLE 900
SEGERKTKVERDIGEGNLSTAAAAALAAAAVKAKHLAAVEERKIKSLVALLVETQMKKLE
Sbjct: 841 SEGERKTKVERDIGEGNLSTAAAAALAAAAVKAKHLAAVEERKIKSLVALLVETQMKKLE 900
Query: 901 IKLRHFEELETIMDREREALEYQRQQLLADRQAFHMEQLKYAEMRARQQHFQQMHQQQQQ 960
IKLRHFEELETIMDREREALEYQRQQLLADRQAFHMEQLKYAEMRARQQHFQQMHQQQQQ
Sbjct: 901 IKLRHFEELETIMDREREALEYQRQQLLADRQAFHMEQLKYAEMRARQQHFQQMHQQQQQ 960
Query: 961 PPPALPPGSQPIPPTGAAGPPAVHGLAVAPASVVPAPAGSGAPPGSLGPSEQIGQAGSTA 1020
PPPALPPGSQPIPPTGAAGPPAVHGLAVAPASVVPAPAGSGAPPGSLGPSEQIGQAGSTA
Sbjct: 961 PPPALPPGSQPIPPTGAAGPPAVHGLAVAPASVVPAPAGSGAPPGSLGPSEQIGQAGSTA 1020
Query: 1021 GPQQQQPAGAPQPGAVPPGVPPPGPHGPSPFPNQQTPPSMMPGAVPGSGHPGVAGNAPLG 1080
GPQQQQPAGAPQPGAVPPGVPPPGPHGPSPFPNQQTPPSMMPGAVPGSGHPGVAGNAPLG
Sbjct: 1021 GPQQQQPAGAPQPGAVPPGVPPPGPHGPSPFPNQQTPPSMMPGAVPGSGHPGVAGNAPLG 1080
Query: 1081 LPFGMPPPPPPPAPSIIPFGSLADSISINLPAPPNLHGHHHHLPFAPGTLPPPNLPVSMA 1140
LPFGMPPPPPPPAPSIIPFGSLADSISINLPAPPNLHGHHHHLPFAPGTLPPPNLPVSMA
Sbjct: 1081 LPFGMPPPPPPPAPSIIPFGSLADSISINLPAPPNLHGHHHHLPFAPGTLPPPNLPVSMA 1140
Query: 1141 NPLHPNLPATTTMPSSLPLGPGLGSAAAQSPAIVAAVQGNLLPSASPLPDPGTPLPPDPT 1200
NPLHPNLPATTTMPSSLPLGPGLGSAAAQSPAIVAAVQGNLLPSASPLPDPGTPLPPDPT
Sbjct: 1141 NPLHPNLPATTTMPSSLPLGPGLGSAAAQSPAIVAAVQGNLLPSASPLPDPGTPLPPDPT 1200
Query: 1201 APSPGTVTPVPPPQ 1214
APSPGTVTPVPPPQ
Sbjct: 1201 APSPGTVTPVPPPQ 1214
>gi|21237808 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin c2 isoform b [Homo sapiens]
Length = 1130
Score = 2172 bits (5629), Expect = 0.0
Identities = 1082/1126 (96%), Positives = 1082/1126 (96%), Gaps = 38/1126 (3%)
Query: 1 MAVRKKDGGPNVKYYEAADTVTQFDNVRLWLGKNYKKYIQAEPPTNKSLSSLVVQLLQFQ 60
MAVRKKDGGPNVKYYEAADTVTQFDNVRLWLGKNYKKYIQAEPPTNKSLSSLVVQLLQFQ
Sbjct: 1 MAVRKKDGGPNVKYYEAADTVTQFDNVRLWLGKNYKKYIQAEPPTNKSLSSLVVQLLQFQ 60
Query: 61 EEVFGKHVSNAPLTKLPIKCFLDFKAGGSLCHILAAAYKFKSDQGWRRYDFQNPSRMDRN 120
EEVFGKHVSNAPLTKLPIKCFLDFKAGGSLCHILAAAYKFKSDQGWRRYDFQNPSRMDRN
Sbjct: 61 EEVFGKHVSNAPLTKLPIKCFLDFKAGGSLCHILAAAYKFKSDQGWRRYDFQNPSRMDRN 120
Query: 121 VEMFMTIEKSLVQNNCLSRPNIFLCPEIEPKLLGKLKDIIKRHQGTVTEDKNNASHVVYP 180
VEMFMTIEKSLVQNNCLSRPNIFLCPEIEPKLLGKLKDIIKRHQGTVTEDKNNASHVVYP
Sbjct: 121 VEMFMTIEKSLVQNNCLSRPNIFLCPEIEPKLLGKLKDIIKRHQGTVTEDKNNASHVVYP 180
Query: 181 VPGNLEEEEWVRPVMKRDKQVLLHWGYYPDSYDTWIPASEIEASVEDAPTPEKPRKVHAK 240
VPGNLEEEEWVRPVMKRDKQVLLHWGYYPDSYDTWIPASEIEASVEDAPTPEKPRKVHAK
Sbjct: 181 VPGNLEEEEWVRPVMKRDKQVLLHWGYYPDSYDTWIPASEIEASVEDAPTPEKPRKVHAK 240
Query: 241 WILDTDTFNEWMNEEDYEVNDDKNPVSRRKKISAKTLTDEVNSPDSDRRDKKGGNYKKRK 300
WILDTDTFNEWMNEEDYEVNDDKNPVSRRKKISAKTLTDEVNSPDSDRRDKKGGNYKKRK
Sbjct: 241 WILDTDTFNEWMNEEDYEVNDDKNPVSRRKKISAKTLTDEVNSPDSDRRDKKGGNYKKRK 300
Query: 301 RSPSPSPTPEAKKKNAKKGPSTPYTKSKRGHREEEQEDLTKDMDEPSPVPNVEEVTLPKT 360
RSPSPSPTPEAKKKNAKKGPSTPYTKSKRGHREEEQEDLTKDMDEPSPVPNVEEVTLPKT
Sbjct: 301 RSPSPSPTPEAKKKNAKKGPSTPYTKSKRGHREEEQEDLTKDMDEPSPVPNVEEVTLPKT 360
Query: 361 VNTKKDSESAPVKGGTMTDLDEQEDESMETTGKDEDENSTGNKGEQTKNPDLHEDNVTEQ 420
VNTKKDSESAPVKGGTMTDLDEQEDESMETTGKDEDENSTGNKGEQTKNPDLHEDNVTEQ
Sbjct: 361 VNTKKDSESAPVKGGTMTDLDEQEDESMETTGKDEDENSTGNKGEQTKNPDLHEDNVTEQ 420
Query: 421 THHIIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEY 480
THHIIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEY
Sbjct: 421 THHIIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEY 480
Query: 481 LTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDAESRPTPMGPPPTSHFHVLADTPSG 540
LTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDAESRPTPMGPPPTSHFHVLADTPSG
Sbjct: 481 LTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDAESRPTPMGPPPTSHFHVLADTPSG 540
Query: 541 LVPLQPKTPQ-------------------------------QTSASQQMLNFPDKGKEKP 569
LVPLQPKTPQ QTSASQQMLNFPDKGKEKP
Sbjct: 541 LVPLQPKTPQGRQVDADTKAGRKGKELDDLVPETAKGKPELQTSASQQMLNFPDKGKEKP 600
Query: 570 TDMQNFGLRTDMYTKKNVPSKSKAAASATREWTEQETLLLLEALEMYKDDWNKVSEHVGS 629
TDMQNFGLRTDMYTKKNVPSKSKAAASATREWTEQETLLLLEALEMYKDDWNKVSEHVGS
Sbjct: 601 TDMQNFGLRTDMYTKKNVPSKSKAAASATREWTEQETLLLLEALEMYKDDWNKVSEHVGS 660
Query: 630 RTQDECILHFLRLPIEDPYLEDSEASLGPLAYQPIPFSQSGNPVMSTVAFLASVVDPRVA 689
RTQDECILHFLRLPIEDPYLEDSEASLGPLAYQPIPFSQSGNPVMSTVAFLASVVDPRVA
Sbjct: 661 RTQDECILHFLRLPIEDPYLEDSEASLGPLAYQPIPFSQSGNPVMSTVAFLASVVDPRVA 720
Query: 690 SAAAKSALEEFSKMKEEVPTALVEAHVRKVEEAAKVTGKADPAFGLESSGIAGTTSDEPE 749
SAAAKSALEEFSKMKEEVPTALVEAHVRKVEEAAKVTGKADPAFGLESSGIAGTTSDEPE
Sbjct: 721 SAAAKSALEEFSKMKEEVPTALVEAHVRKVEEAAKVTGKADPAFGLESSGIAGTTSDEPE 780
Query: 750 RIEESGNDEARVEGQATDEKKEPKEPREGGGAIEEEAKEKTSEAPKKDEEKGKEGDSEKE 809
RIEESGNDEARVEGQATDEKKEPKEPREGGGAIEEEAKEKTSEAPKKDEEKGKEGDSEKE
Sbjct: 781 RIEESGNDEARVEGQATDEKKEPKEPREGGGAIEEEAKEKTSEAPKKDEEKGKEGDSEKE 840
Query: 810 SEKSDGDPIVDPEKEKEPKEGQEEVLKEVVESEGERKTKVERDIGEGNLSTAAAAALAAA 869
SEKSDGDPIVDPEKEKEPKEGQEEVLKEVVESEGERKTKVERDIGEGNLSTAAAAALAAA
Sbjct: 841 SEKSDGDPIVDPEKEKEPKEGQEEVLKEVVESEGERKTKVERDIGEGNLSTAAAAALAAA 900
Query: 870 AVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREREALEYQRQQLLA 929
AVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREREALEYQRQQLLA
Sbjct: 901 AVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREREALEYQRQQLLA 960
Query: 930 DRQAFHMEQLKYAEMRARQQHFQQMHQQQQQPPPALPPGSQPIPPTGAAGPPAVHGLAVA 989
DRQAFHMEQLKYAEMRARQQHFQQMHQQQQQPPPALPPGSQPIPPTGAAGPPAVHGLAVA
Sbjct: 961 DRQAFHMEQLKYAEMRARQQHFQQMHQQQQQPPPALPPGSQPIPPTGAAGPPAVHGLAVA 1020
Query: 990 PASVVPAPAGSGAPPGSLGPSEQIGQAGSTAGPQQQQPAGAPQPGAVPPGVPPPGPHGPS 1049
PASVVPAPAGSGAPPGSLGPSEQIGQAGSTAGPQQQQPAGAPQPGAVPPGVPPPGPHGPS
Sbjct: 1021 PASVVPAPAGSGAPPGSLGPSEQIGQAGSTAGPQQQQPAGAPQPGAVPPGVPPPGPHGPS 1080
Query: 1050 PFPNQQTPPSMMPGAVPGSGHPGVAGNAPLGLPFGMPPPPPPPAPS 1095
PFPNQQTPPSMMPGAVPGSGHPGVA G P PP P APS
Sbjct: 1081 PFPNQQTPPSMMPGAVPGSGHPGVADP-------GTPLPPDPTAPS 1119
>gi|194363725 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin c2 isoform c [Homo sapiens]
Length = 1152
Score = 2171 bits (5626), Expect = 0.0
Identities = 1085/1141 (95%), Positives = 1086/1141 (95%), Gaps = 46/1141 (4%)
Query: 1 MAVRKKDGGPNVKYYEAADTVTQFDNVRLWLGKNYKKYIQAEPPTNKSLSSLVVQLLQFQ 60
MAVRKKDGGPNVKYYEAADTVTQFDNVRLWLGKNYKKYIQAEPPTNKSLSSLVVQLLQFQ
Sbjct: 1 MAVRKKDGGPNVKYYEAADTVTQFDNVRLWLGKNYKKYIQAEPPTNKSLSSLVVQLLQFQ 60
Query: 61 EEVFGKHVSNAPLTKLPIKCFLDFKAGGSLCHILAAAYKFKSDQGWRRYDFQNPSRMDRN 120
EEVFGKHVSNAPLTKLPIKCFLDFKAGGSLCHILAAAYKFKSDQGWRRYDFQNPSRMDRN
Sbjct: 61 EEVFGKHVSNAPLTKLPIKCFLDFKAGGSLCHILAAAYKFKSDQGWRRYDFQNPSRMDRN 120
Query: 121 VEMFMTIEKSLVQNNCLSRPNIFLCPEIEPKLLGKLKDIIKRHQGTVTEDKNNASHVVYP 180
VEMFMTIEKSLVQNNCLSRPNIFLCPEIEPKLLGKLKDIIKRHQGTVTEDKNNASHVVYP
Sbjct: 121 VEMFMTIEKSLVQNNCLSRPNIFLCPEIEPKLLGKLKDIIKRHQGTVTEDKNNASHVVYP 180
Query: 181 VPGNLEEEEWVRPVMKRDKQVLLHWGYYPDSYDTWIPASEIEASVEDAPTPEKPRKVHAK 240
VPGNLEEEEWVRPVMKRDKQVLLHWGYYPDSYDTWIPASEIEASVEDAPTPEKPRKVHAK
Sbjct: 181 VPGNLEEEEWVRPVMKRDKQVLLHWGYYPDSYDTWIPASEIEASVEDAPTPEKPRKVHAK 240
Query: 241 WILDTDTFNEWMNEEDYEVNDDKNPVSRRKKISAKTLTDEVNSPDSDRRDKKGGNYKKRK 300
WILDTDTFNEWMNEEDYEVNDDKNPVSRRKKISAKTLTDEVNSPDSDRRDKKGGNYKKRK
Sbjct: 241 WILDTDTFNEWMNEEDYEVNDDKNPVSRRKKISAKTLTDEVNSPDSDRRDKKGGNYKKRK 300
Query: 301 RSPSPSPTPEAKKKNAKKGPSTPYTKSKRGHREEEQEDLTKDMDEPSPVPNVEEVTLPKT 360
RSPSPSPTPEAKKKNAKKGPSTPYTKSKRGHREEEQEDLTKDMDEPSPVPNVEEVTLPKT
Sbjct: 301 RSPSPSPTPEAKKKNAKKGPSTPYTKSKRGHREEEQEDLTKDMDEPSPVPNVEEVTLPKT 360
Query: 361 VNTKKDSESAPVKGGTMTDLDEQEDESMETTGKDEDENSTGNKGEQTKNPDLHEDNVTEQ 420
VNTKKDSESAPVKGGTMTDLDEQEDESMETTGKDEDENSTGNKGEQTKNPDLHEDNVTEQ
Sbjct: 361 VNTKKDSESAPVKGGTMTDLDEQEDESMETTGKDEDENSTGNKGEQTKNPDLHEDNVTEQ 420
Query: 421 THHIIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEY 480
THHIIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEY
Sbjct: 421 THHIIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEY 480
Query: 481 LTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDAESRPTPMGPPPTSHFHVLADTPSG 540
LTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDAESRPTPMGPPPTSHFHVLADTPSG
Sbjct: 481 LTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDAESRPTPMGPPPTSHFHVLADTPSG 540
Query: 541 LVPLQPKTPQ-------------------------------QTSASQQMLNFPDKGKEKP 569
LVPLQPKTPQ QTSASQQMLNFPDKGKEKP
Sbjct: 541 LVPLQPKTPQGRQVDADTKAGRKGKELDDLVPETAKGKPELQTSASQQMLNFPDKGKEKP 600
Query: 570 TDMQNFGLRTDMYTKKNVPSKSKAAASATREWTEQETLLLLEALEMYKDDWNKVSEHVGS 629
TDMQNFGLRTDMYTKKNVPSKSKAAASATREWTEQETLLLLEALEMYKDDWNKVSEHVGS
Sbjct: 601 TDMQNFGLRTDMYTKKNVPSKSKAAASATREWTEQETLLLLEALEMYKDDWNKVSEHVGS 660
Query: 630 RTQDECILHFLRLPIEDPYLEDSEASLGPLAYQPIPFSQSGNPVMSTVAFLASVVDPRVA 689
RTQDECILHFLRLPIEDPYLEDSEASLGPLAYQPIPFSQSGNPVMSTVAFLASVVDPRVA
Sbjct: 661 RTQDECILHFLRLPIEDPYLEDSEASLGPLAYQPIPFSQSGNPVMSTVAFLASVVDPRVA 720
Query: 690 SAAAKSALEEFSKMKEEVPTALVEAHVRKVEEAAKVTGKADPAFGLESSGIAGTTSDEPE 749
SAAAKSALEEFSKMKEEVPTALVEAHVRKVEEAAKVTGKADPAFGLESSGIAGTTSDEPE
Sbjct: 721 SAAAKSALEEFSKMKEEVPTALVEAHVRKVEEAAKVTGKADPAFGLESSGIAGTTSDEPE 780
Query: 750 RIEESGNDEARVEGQATDEKKEPKEPREGGGAIEEEAKEKTSEAPKKDEEKGKEGDSEKE 809
RIEESGNDEARVEGQATDEKKEPKEPREGGGAIEEEAKEKTSEAPKKDEEKGKEGDSEKE
Sbjct: 781 RIEESGNDEARVEGQATDEKKEPKEPREGGGAIEEEAKEKTSEAPKKDEEKGKEGDSEKE 840
Query: 810 SEKSDGDPIVDPEKEKEPKEGQEEVLKEVVESEGERKTKVERDIGEGNLSTAAAAALAAA 869
SEKSDGDPIVDPEKEKEPKEGQEEVLKEVVESEGERKTKVERDIGEGNLSTAAAAALAAA
Sbjct: 841 SEKSDGDPIVDPEKEKEPKEGQEEVLKEVVESEGERKTKVERDIGEGNLSTAAAAALAAA 900
Query: 870 AVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREREALEYQRQQLLA 929
AVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREREALEYQRQQLLA
Sbjct: 901 AVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREREALEYQRQQLLA 960
Query: 930 DRQAFHMEQLKYAEMRARQQHFQQMHQQQQQPPPALPPGSQPIPPTGAAGPPAVHGLAVA 989
DRQAFHMEQLKYAEMRARQQHFQQMHQQQQQPPPALPPGSQPIPPTGAAGPPAVHGLAVA
Sbjct: 961 DRQAFHMEQLKYAEMRARQQHFQQMHQQQQQPPPALPPGSQPIPPTGAAGPPAVHGLAVA 1020
Query: 990 PASVVPAPAGSGAPPGSLGPSEQIGQAGSTAGPQQQQPAGAPQPGAVPPGVPPPGPHGPS 1049
PASVVPAPAGSGAPPGSLGPSEQIGQAGSTAGPQQQQPAGAPQPGAVPPGVPPPGPHGPS
Sbjct: 1021 PASVVPAPAGSGAPPGSLGPSEQIGQAGSTAGPQQQQPAGAPQPGAVPPGVPPPGPHGPS 1080
Query: 1050 PFPNQQTPPSMMPGAVPGSGHPGVAGNAPL--------------GLPF-GMPPPPPPPAP 1094
PFPNQQTPPSMMPGAVPGSGHPGVA +P LP G P PP P AP
Sbjct: 1081 PFPNQQTPPSMMPGAVPGSGHPGVAAQSPAIVAAVQGNLLPSASPLPDPGTPLPPDPTAP 1140
Query: 1095 S 1095
S
Sbjct: 1141 S 1141
>gi|188536047 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin c1 [Homo sapiens]
Length = 1105
Score = 1352 bits (3500), Expect = 0.0
Identities = 703/1111 (63%), Positives = 847/1111 (76%), Gaps = 65/1111 (5%)
Query: 4 RKKDGGPNVKYYEAADTVTQFDNVRLWLGKNYKKYIQAEPPTNKSLSSLVVQLLQFQEEV 63
R+KDGGP K++E+ +TV+Q D+VR+WLGK+YKKY+ A+ PTNK+L+ LVVQLLQFQE+
Sbjct: 32 RRKDGGPATKFWESPETVSQLDSVRVWLGKHYKKYVHADAPTNKTLAGLVVQLLQFQEDA 91
Query: 64 FGKHVSNAPLTKLPIKCFLDFKAGGSLCHILAAAYKFKSDQGWRRYDFQNPSRMDRNVEM 123
FGKHV+N TKLP KCF+DFKAGG+LCHIL AAYK+K++QGWRR+D QNPSRMDRNVEM
Sbjct: 92 FGKHVTNPAFTKLPAKCFMDFKAGGALCHILGAAYKYKNEQGWRRFDLQNPSRMDRNVEM 151
Query: 124 FMTIEKSLVQNNCLSRPNIFLCPEIEPKLLGKLKDIIKRHQGTVTEDKNNASHVVYPVPG 183
FM IEK+LVQNNCL+RPNI+L P+I+ KL KLKDIIKRHQGT T++K+ ASH +YP
Sbjct: 152 FMNIEKTLVQNNCLTRPNIYLIPDIDLKLANKLKDIIKRHQGTFTDEKSKASHHIYPYSS 211
Query: 184 NLEEEEWVRPVMKRDKQVLLHWGYYPDSYDTWIPASEIEASVEDAPTPEKPRKVHAKWIL 243
+ ++EEW+RPVM+++KQVL+HWG+YPDSYDTW+ +++++A +ED P PEKP KVH KWIL
Sbjct: 212 SQDDEEWLRPVMRKEKQVLVHWGFYPDSYDTWVHSNDVDAEIEDPPIPEKPWKVHVKWIL 271
Query: 244 DTDTFNEWMNEEDYEVNDDKNPVSRRKKISAKTLTDEVNSPDSDRRDKKGG-NYKKRKRS 302
DTD FNEWMNEEDYEV++++ PVS R++IS K + V SP+ RRD+K N +KRK S
Sbjct: 272 DTDIFNEWMNEEDYEVDENRKPVSFRQRISTKN-EEPVRSPE--RRDRKASANARKRKHS 328
Query: 303 PSPSP-TP-EAKKKNAKKGPSTPYTKSKRGHREEEQEDLTKDMDEPSPVPNVEEVTLPKT 360
PSP P TP E++KK+ KKG ++ Y K + E+EQEDLTKDM++P+PVPN+EEV LPK
Sbjct: 329 PSPPPPTPTESRKKSGKKGQASLYGKRRSQKEEDEQEDLTKDMEDPTPVPNIEEVVLPKN 388
Query: 361 VNTKKDSESAPVKGGTMTDLDEQEDESMETTGKDEDENSTGNKGEQTKNPDLHEDNVTEQ 420
VN KKDSE+ PVKGGT+ DLDEQ++E++ GK++++ + KG+Q+++ DL EDNVTEQ
Sbjct: 389 VNLKKDSENTPVKGGTVADLDEQDEETVTAGGKEDEDPA---KGDQSRSVDLGEDNVTEQ 445
Query: 421 THHIIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEY 480
T+HIIIPSYA+WFDYN +H IERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEY
Sbjct: 446 TNHIIIPSYASWFDYNCIHVIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEY 505
Query: 481 LTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDAESRPTPMGPPPTSHFHVLADTPSG 540
LTSTACRRNL GDVCA+MRVHAFLEQWGL+NYQVD ESRP MGPPPT HF+VLADTPSG
Sbjct: 506 LTSTACRRNLTGDVCAVMRVHAFLEQWGLVNYQVDPESRPMAMGPPPTPHFNVLADTPSG 565
Query: 541 LVPLQPKTPQQTSASQQMLNFPDKGKEKPTDMQNFGLRTDMYTKKNVPSKSKAAASATRE 600
LVPL ++PQ A+QQMLNFP+K KEKP D+QNFGLRTD+Y+KK + +KSK A SA RE
Sbjct: 566 LVPLHLRSPQ-VPAAQQMLNFPEKNKEKPVDLQNFGLRTDIYSKKTL-AKSKGA-SAGRE 622
Query: 601 WTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILHFLRLPIEDPYLEDSEASLGPLA 660
WTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILHFLRLPIEDPYLE+S+ASLGPLA
Sbjct: 623 WTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILHFLRLPIEDPYLENSDASLGPLA 682
Query: 661 YQPIPFSQSGNPVMSTVAFLASVVDPRVASAAAKSALEEFSKMKEEVPTALVEAHVRKVE 720
YQP+PFSQSGNPVMSTVAFLASVVDPRVASAAAK+ALEEFS+++EEVP LVEAHV+KV+
Sbjct: 683 YQPVPFSQSGNPVMSTVAFLASVVDPRVASAAAKAALEEFSRVREEVPLELVEAHVKKVQ 742
Query: 721 EAAKVTGKADPAFGLESSGIAGTTSDEPERIEESGNDEARVEGQATDEKKEPKEPREGGG 780
EAA+ +GK DP +GLESS IAGT DEPE++E G +E ++E ++ E E +
Sbjct: 743 EAARASGKVDPTYGLESSCIAGTGPDEPEKLE--GAEEEKMEADPDGQQPEKAENK---- 796
Query: 781 AIEEEAKEKTSEAPKKDEEKGKEGDSEKESEKSDGDPIVDPEKEKEPKEGQEEVLKEVVE 840
+E E E +K ++G++EK SEK D V + + E KE +E KE+ +
Sbjct: 797 -VENETDEG---------DKAQDGENEKNSEKEQ-DSEVSEDTKSEEKETEEN--KELTD 843
Query: 841 SEGER-----KTKVERDIGEGNLSTAAAAALAAAAVKAKHLAAVEERKIKSLVALLVETQ 895
+ ER K KVE +I EGN++TAAAAALA+AA KAKHLAAVEERKIKSLVALLVETQ
Sbjct: 844 TCKERESDTGKKKVEHEISEGNVATAAAAALASAATKAKHLAAVEERKIKSLVALLVETQ 903
Query: 896 MKKLEIKLRHFEELETIMDREREALEYQRQQLLADRQAFHMEQLKYAEMRARQQHFQQMH 955
MKKLEIKLRHFEELETIMDRE+EALE QRQQLL +RQ FHMEQLKYAE+RARQQ QQ H
Sbjct: 904 MKKLEIKLRHFEELETIMDREKEALEQQRQQLLTERQNFHMEQLKYAELRARQQMEQQQH 963
Query: 956 QQQQQPPPALPPGSQPIPPTGAAGPPAVHGLAVAPASVVPAPAGSGAPPGSLGPSEQIGQ 1015
Q Q G + P GAAG P + P P P P
Sbjct: 964 GQNPQQAHQ-HSGGPGLAPLGAAGHPGMMPHQQPP----PYPLMHHQMPP---------- 1008
Query: 1016 AGSTAGPQQQQPAGAPQPGAVPPGVPPPGPHGPS------PFPNQQTPPSM--MPGAVPG 1067
P QP P PG++ PG PG P+ P + TPP M MPG + G
Sbjct: 1009 ------PHPPQPGQIPGPGSMMPGQHMPGRMIPTVAANIHPSGSGPTPPGMPPMPGNILG 1062
Query: 1068 SGHPGVAGNAPLGLPFGMPPPPPPPAPSIIP 1098
P A N P PPPPPPA + P
Sbjct: 1063 PRVPLTAPNGMYPPPPQQQPPPPPPADGVPP 1093
Score = 36.2 bits (82), Expect = 0.19
Identities = 41/153 (26%), Positives = 49/153 (32%), Gaps = 52/153 (33%)
Query: 1068 SGHPGVAGNAPLGLPFGMPPPPPPPAPSIIPFGSLADSISINLPAPPNLHGHHHHLPFAP 1127
SG PG+A G P MP PPP P + HH +P
Sbjct: 974 SGGPGLAPLGAAGHPGMMPHQQPPPYPLM-----------------------HHQMP--- 1007
Query: 1128 GTLPPPNLPVSMANPLHPNLPATTTMPSSLPLGPGLGSAAAQSPAIVAAVQGNLLPSASP 1187
P HP P P S+ PG P + A N+ PS S
Sbjct: 1008 --------------PPHPPQPGQIPGPGSMM--PGQHMPGRMIPTVAA----NIHPSGSG 1047
Query: 1188 LPDPGTPLPPD----PTAP--SPGTVTPVPPPQ 1214
PG P P P P +P + P PP Q
Sbjct: 1048 PTPPGMPPMPGNILGPRVPLTAPNGMYPPPPQQ 1080
Score = 33.5 bits (75), Expect = 1.3
Identities = 15/25 (60%), Positives = 17/25 (68%), Gaps = 2/25 (8%)
Query: 958 QQQPPPALPPGSQPIPPTGAAGPPA 982
QQQPPP PP + +PP A GPPA
Sbjct: 1079 QQQPPP--PPPADGVPPPPAPGPPA 1101
>gi|160707881 formin 2 [Homo sapiens]
Length = 1722
Score = 102 bits (253), Expect = 3e-21
Identities = 93/280 (33%), Positives = 113/280 (40%), Gaps = 58/280 (20%)
Query: 960 QPPPA-----LPPGSQPIPPTGAAGPPAVHGLAVAPASVVPAPAGSGAPPGSLGPSEQIG 1014
QPPP LPP P+P G PP + G + P +P G+G PP P
Sbjct: 898 QPPPLQGTEMLPPPPPPLPGAGIPPPPPLPGAGILPLPPLP---GAGIPPPPPLP----- 949
Query: 1015 QAGSTAGPQQQQP-AGAPQPGAVP-PGVPPPGP------HGPSPFPNQQTPPSMMPGAVP 1066
G+ P P AG P P +P G+PPP P P P P PP P +P
Sbjct: 950 --GAAIPPPPPLPGAGIPLPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPP---PPPLP 1004
Query: 1067 GSGHPGVAGNAPLGLP-FGMPPPPPPPAPSIIPFGSLADSISINLPAPPNLHGHHHHLPF 1125
G+G P P LP G+PPPPP P I P L + +P PP L G
Sbjct: 1005 GAGIP-----PPPPLPGAGIPPPPPLPGAGIPPPPPLPGA---GIPPPPPLPG------- 1049
Query: 1126 APGTLPPPNLPVSMANPLHP----NLPATTTMP-SSLPLGPGLGSAAAQSPAIVAAVQGN 1180
G PPP LP + P P +P +P + +P P L A P + V
Sbjct: 1050 -AGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGVG-- 1106
Query: 1181 LLPSASPLPDPGTPLPP-------DPTAPSPGTVTPVPPP 1213
+P PLP G P PP P P PG P PPP
Sbjct: 1107 -IPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPP 1145
Score = 100 bits (249), Expect = 8e-21
Identities = 95/291 (32%), Positives = 111/291 (38%), Gaps = 61/291 (20%)
Query: 961 PPPALP-PGSQPIPPTGAAG---PPAVHGLAVAPASVVPAPA--------GSGAPPGSLG 1008
PPP LP G P+PP AG PP + G A+ P +P G+G PP
Sbjct: 922 PPPPLPGAGILPLPPLPGAGIPPPPPLPGAAIPPPPPLPGAGIPLPPPLPGAGIPPPPPL 981
Query: 1009 PSEQIGQAGSTAGPQQQQPAGAPQPGAVPP------GVPPPGP------HGPSPFPNQQT 1056
P I G P P G PP G+PPP P P P P
Sbjct: 982 PGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGI 1041
Query: 1057 PPSMMPGAVPGSGHPGVAGNAPLGLP-FGMPPPPPPPAPSIIPFGSLADSISINLPAPPN 1115
PP P +PG+G P P LP G+PPPPP P I P L + +P PP
Sbjct: 1042 PP---PPPLPGAGIP-----PPPPLPGAGIPPPPPLPGAGIPPPPPLPGA---GIPPPPP 1090
Query: 1116 LHGHHHHLPFAPGTLPPPNLPVSMANPLHPNLPATTTMP------SSLPLGPGLGSAAAQ 1169
L G G PPP LP + P P LP P + +P P L A
Sbjct: 1091 LPG--------AGIPPPPPLP-GVGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIP 1141
Query: 1170 SPAIVAAVQGNLLPSASPLPDPGTPLPP-------DPTAPSPGTVTPVPPP 1213
P + V +P PLP G P PP P P PG P PPP
Sbjct: 1142 PPPPLPRVG---IPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGVGIPPPPP 1189
Score = 99.0 bits (245), Expect = 2e-20
Identities = 93/278 (33%), Positives = 108/278 (38%), Gaps = 44/278 (15%)
Query: 961 PPPALP----PGSQPIPPTGAAGPPAVHGLAVAPASVVPAPAGSGAPPGSLGPSEQIGQA 1016
PPP LP P P+P G PP + G + P +P G+G PP P I
Sbjct: 977 PPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLP---GAGIPPPPPLPGAGIPPP 1033
Query: 1017 GSTAGPQQQQPAGAPQPGAVPP------GVPPPGP------HGPSPFPNQQTPPSMMPGA 1064
G P P G PP G+PPP P P P P PP P
Sbjct: 1034 PPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPP---PPP 1090
Query: 1065 VPGSGHPGVAGNAPLGLP-FGMPPPPPPPAPSIIPFGSLADSISINLPAPPNLHGHHHHL 1123
+PG+G P P LP G+PPPPP P I P L + +P PP L G +
Sbjct: 1091 LPGAGIP-----PPPPLPGVGIPPPPPLPGAGIPPPPPLPGA---GIPPPPPLPGAG--I 1140
Query: 1124 PFAP-----GTLPPPNLPVSMANPLHPNLPATTTMPSSLPLGPGLGSAAAQSPAIVAAVQ 1178
P P G PPP LP P P LP P P PG+G V
Sbjct: 1141 PPPPPLPRVGIPPPPPLP-GAGIPPPPPLPGAGIPPP--PPLPGVGIPPPPPLPGVGIPP 1197
Query: 1179 GNLLPSAS---PLPDPGTPLPPDPTAPSPGTVTPVPPP 1213
LP A P P PG +PP P P P T +PPP
Sbjct: 1198 PPPLPGAGIPPPPPLPGMGIPPAPAPPLPPPGTGIPPP 1235
Score = 98.6 bits (244), Expect = 3e-20
Identities = 87/262 (33%), Positives = 102/262 (38%), Gaps = 57/262 (21%)
Query: 961 PPPALP----PGSQPIPPTGAAGPPAVHGLAVAPASVVPAPAGSGAPPGSLGPSEQIGQA 1016
PPP LP P P+P G PP + G + P +P G+G PP P I
Sbjct: 1021 PPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLP---GAGIPPPPPLPGAGIPPP 1077
Query: 1017 GSTAGPQQQQPAGAPQPGAVPP------GVPPPGP------HGPSPFPNQQTPPSMMPGA 1064
G P P G PP G+PPP P P P P PP P
Sbjct: 1078 PPLPGAGIPPPPPLPGAGIPPPPPLPGVGIPPPPPLPGAGIPPPPPLPGAGIPP---PPP 1134
Query: 1065 VPGSGHPGVAGNAPLGLP-FGMPPPPPPPAPSIIPFGSLADSISINLPAPPNLHGHHHHL 1123
+PG+G P P LP G+PPPPP P I P L + +P PP L G
Sbjct: 1135 LPGAGIP-----PPPPLPRVGIPPPPPLPGAGIPPPPPLPGA---GIPPPPPLPG----- 1181
Query: 1124 PFAPGTLPPPNLPVSMANPLHPNLPATTTMPSSLPLGPGLGSAAAQSPAIVAAVQGNLLP 1183
G PPP LP + P P LP P P PG+G A +P
Sbjct: 1182 ---VGIPPPPPLP-GVGIPPPPPLPGAGIPPP--PPLPGMGIPPAPAP------------ 1223
Query: 1184 SASPLPDPGTPLPPDPTAPSPG 1205
PLP PGT +PP P P G
Sbjct: 1224 ---PLPPPGTGIPPPPLLPVSG 1242
Score = 98.2 bits (243), Expect = 4e-20
Identities = 90/284 (31%), Positives = 108/284 (38%), Gaps = 46/284 (16%)
Query: 961 PPPALPPGSQPIPPTGAAG---PPAVHGLAVAPASVVPAPAGSGAPPGSLGPSEQIGQAG 1017
PPP G P PP AG PP + G + P +P G+G PP P I
Sbjct: 967 PPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLP---GAGIPPPPPLPGAGIPPPP 1023
Query: 1018 STAGPQQQQPAGAPQPGAVPP------GVPPPGP------HGPSPFPNQQTPPSMMPGAV 1065
G P P G PP G+PPP P P P P PP P +
Sbjct: 1024 PLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPP---PPPL 1080
Query: 1066 PGSGHPGVAGNAPLGLP-------FGMPPPPPPPAPSIIPFGSLADSISINLPAPPNLHG 1118
PG+G P G+P G+PPPPP P I P L + +P PP L G
Sbjct: 1081 PGAGIPPPPPLPGAGIPPPPPLPGVGIPPPPPLPGAGIPPPPPLPGA---GIPPPPPLPG 1137
Query: 1119 HHHHLPFAP-----GTLPPPNLPVSMANPLHP----NLPATTTMPS-SLPLGPGLGSAAA 1168
+P P G PPP LP + P P +P +P +P P L
Sbjct: 1138 --AGIPPPPPLPRVGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGVGIPPPPPLPGVGI 1195
Query: 1169 QSPAIVAAVQGNLLPSASPLPDPGTPLPPDPTAPSPGTVTPVPP 1212
P + G +P PLP G P P P P PGT P PP
Sbjct: 1196 PPP---PPLPGAGIPPPPPLPGMGIPPAPAPPLPPPGTGIPPPP 1236
Score = 97.8 bits (242), Expect = 5e-20
Identities = 91/288 (31%), Positives = 109/288 (37%), Gaps = 55/288 (19%)
Query: 961 PPPALPPGS-QPIPPTGAAG---PPAVHGLAVAPASVVPAPAGSGAPPGSLGPSEQIGQA 1016
PPP LP + P PP AG PP + G + P +P G+G PP P I
Sbjct: 944 PPPPLPGAAIPPPPPLPGAGIPLPPPLPGAGIPPPPPLP---GAGIPPPPPLPGAGIPPP 1000
Query: 1017 GSTAGPQQQQPAGAPQPGAVPP------GVPPPGP------HGPSPFPNQQTPPSMMPGA 1064
G P P G PP G+PPP P P P P PP P
Sbjct: 1001 PPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPP---PPP 1057
Query: 1065 VPGSGHPGVAGNAPLGLP-------FGMPPPPPPPAPSIIPFGSLADSISINLPAPPNLH 1117
+PG+G P G+P G+PPPPP P I P L + +P PP L
Sbjct: 1058 LPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLP---GVGIPPPPPLP 1114
Query: 1118 GHHHHLPFAPGTLPPPNLPVSMANPLHP----NLPATTTMPS-SLPLGPGLGSAAAQSPA 1172
G G PPP LP + P P +P +P +P P L A P
Sbjct: 1115 G--------AGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPRVGIPPPPPLPGAGIPPP- 1165
Query: 1173 IVAAVQGNLLPSASPLPDPGTPLPP-------DPTAPSPGTVTPVPPP 1213
+ G +P PLP G P PP P P PG P PPP
Sbjct: 1166 --PPLPGAGIPPPPPLPGVGIPPPPPLPGVGIPPPPPLPGAGIPPPPP 1211
Score = 92.8 bits (229), Expect = 2e-18
Identities = 87/275 (31%), Positives = 103/275 (37%), Gaps = 52/275 (18%)
Query: 961 PPPALP----PGSQPIPPTGAAGPPAVHGLAVAPASVVPAPAGSGAPPGSLGPSEQIGQA 1016
PPP LP P P+P G PP + G + P +P G+G PP P I
Sbjct: 999 PPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLP---GAGIPPPPPLPGAGIPPP 1055
Query: 1017 GSTAGPQQQQPAGAPQPGAVPP------GVPPPGP------HGPSPFPNQQTPPSMMPGA 1064
G P P G PP G+PPP P P P P PP P
Sbjct: 1056 PPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGVGIPP---PPP 1112
Query: 1065 VPGSGHPGVAGNAPLGLP-FGMPPPPPPPAPSIIPFGSLADSISINLPAPPNLHGHHHHL 1123
+PG+G P P LP G+PPPPP P I P L + +P PP L G
Sbjct: 1113 LPGAGIP-----PPPPLPGAGIPPPPPLPGAGIPPPPPLP---RVGIPPPPPLPG----- 1159
Query: 1124 PFAPGTLPPPNLPVSMANPLHP----NLPATTTMPS-SLPLGPGLGSAAAQSPAIVAAVQ 1178
G PPP LP + P P +P +P +P P L A P
Sbjct: 1160 ---AGIPPPPPLPGAGIPPPPPLPGVGIPPPPPLPGVGIPPPPPLPGAGIPPPPP----- 1211
Query: 1179 GNLLPSASPLPDPGTPLPPDPTAPSPGTVTPVPPP 1213
LP P P PLPP T P + PV P
Sbjct: 1212 ---LPGMGIPPAPAPPLPPPGTGIPPPPLLPVSGP 1243
Score = 82.4 bits (202), Expect = 2e-15
Identities = 111/426 (26%), Positives = 159/426 (37%), Gaps = 83/426 (19%)
Query: 813 SDGDPIVDPEKEKEPKEGQEEVLKEVVESEGERKTKVERDIGEGNLSTAAAAALAAAAVK 872
S G P P++E ++ + E V E+ +R V++++ + +K
Sbjct: 624 SMGPPSKPPDEEHRLEDAETESQSAVSETPQKRSDAVQKEVVD---------------MK 668
Query: 873 AKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREREALEYQRQQLLADRQ 932
++ A V ++ +++ L T++ +LE R + L+T + + LE + A
Sbjct: 669 SEGQATVIQQLEQTIEDL--RTKIAELE---RQYPALDTEVASGHQGLE---NGVTASGD 720
Query: 933 AFHMEQLKYAEMRARQQHFQQMHQQQQQPPP-----ALPP-----GSQPIPPTGAAGPPA 982
+E L+ E R + Q P LPP G P PP +GP
Sbjct: 721 VC-LEALRLEEKEVRHHRILEAKSIQTSPTEEGGVLTLPPVDGLPGRPPCPPGAESGPQT 779
Query: 983 VHGLAVAPASVVPAPAGSGAPPGSLGPSEQIGQAGSTAGPQQQQPAGAPQPGAVPPG--- 1039
+ S++ +P S P++ I Q P AG QPG+ PP
Sbjct: 780 KF---CSEISLIVSPRRISVQLDSHQPTQSISQPPPP--PSLLWSAGQGQPGSQPPHSIS 834
Query: 1040 --VPPPGPHG-PSPFPNQQTPPSM--MPGAVPGSGHPGVAGNAPLGLPFGMPPPPPPPAP 1094
H S F N PS +P S PG+ GM PPPPPP P
Sbjct: 835 TEFQTSHEHSVSSAFKNSCNIPSPPPLPCTESSSSMPGL----------GMVPPPPPPLP 884
Query: 1095 SIIPFGSLADSISINLPAPPNLHGHHHHLPFAPGTLPPPNLPVSMANPLHPNLPATTTMP 1154
+ ++ S +P PP L G P PPP LP P P LP +P
Sbjct: 885 GM----TVPTLPSTAIPQPPPLQGTEMLPP------PPPPLP-GAGIPPPPPLPGAGILP 933
Query: 1155 SSLPLGPGLGSAAAQSPAIVAAVQGNLLPSASPLPDPGTPLPP-------DPTAPSPGTV 1207
LP PG G + G +P PLP G PLPP P P PG
Sbjct: 934 --LPPLPGAGIPPP------PPLPGAAIPPPPPLPGAGIPLPPPLPGAGIPPPPPLPGAG 985
Query: 1208 TPVPPP 1213
P PPP
Sbjct: 986 IPPPPP 991
Score = 58.5 bits (140), Expect = 4e-08
Identities = 68/219 (31%), Positives = 81/219 (36%), Gaps = 89/219 (40%)
Query: 961 PPPALP----PGSQPIPPTGAAGPPAVHGLAVAPASVVPAPAGSGAPPGSLGPSEQIGQA 1016
PPP LP P P+P G PP + G + P +P G+G PP
Sbjct: 1131 PPPPLPGAGIPPPPPLPRVGIPPPPPLPGAGIPPPPPLP---GAGIPP------------ 1175
Query: 1017 GSTAGPQQQQPAGAPQPGAVPPGVPPPGPHGPSPFPNQQTPPSMMPGAVPGSGHPGVAGN 1076
P PG G+PP P P P PP P +PG+G
Sbjct: 1176 ------------PPPLPGV---GIPP-----PPPLPGVGIPP---PPPLPGAG------- 1205
Query: 1077 APLGLPFGMPPPPPPPAPSIIPFGSLADSISINLPAPPNLHGHHHHLPFAPGT--LPPPN 1134
+PPPPP P I P PAPP LP PGT PPP
Sbjct: 1206 --------IPPPPPLPGMGIPP-----------APAPP--------LP-PPGTGIPPPPL 1237
Query: 1135 LPVSMANPLHPNLPATTT--------MPSSLPLGP-GLG 1164
LPVS PL P + ++T +P LP G GLG
Sbjct: 1238 LPVS-GPPLLPQVGSSTLPTPQVCGFLPPPLPSGLFGLG 1275
Score = 42.4 bits (98), Expect = 0.003
Identities = 40/161 (24%), Positives = 65/161 (40%), Gaps = 16/161 (9%)
Query: 923 QRQQLLAD-RQAFHMEQLKYAEMRARQQHFQQMHQQQQQPPPALPPGSQPIPPTGAAGPP 981
+++ LL+D +QA ++Q +QQ Q+ QQQQ L +P P A P
Sbjct: 191 EQEDLLSDIQQAIRLQQ--------QQQQQLQLQLQQQQQQQQLQGAEEPAAPPTAVSPQ 242
Query: 982 AVHGLAVAPASVVPAPAGSGAPPGSLGPSEQIGQAG---STAGPQQQQPAGAPQPGAVPP 1038
L + + P+ G+G PGS + + + + ++P P PG +P
Sbjct: 243 PGAFLGLDRFLLGPS-GGAGEAPGSPDTEQALSALSDLPESLAAEPREPQQPPSPGGLPV 301
Query: 1039 GVPPPGPHGPSPFPNQQTPPSMMPGAVPGSGHPGVAGNAPL 1079
P P+ P + PS P +G A AP+
Sbjct: 302 S---EAPSLPAAQPAAKDSPSSTAFPFPEAGPGEEAAGAPV 339
>gi|42544130 splicing factor 1 isoform 1 [Homo sapiens]
Length = 639
Score = 90.5 bits (223), Expect = 9e-18
Identities = 90/276 (32%), Positives = 107/276 (38%), Gaps = 51/276 (18%)
Query: 961 PPPALPPGSQPIPPTGAAGPPA---VHGLAVAPASVVPAPAGSGAPPGSLGPSEQIGQAG 1017
PPP+L +Q PP +GP HG+ P G G P S G
Sbjct: 354 PPPSLMSTTQSRPPWMNSGPSESRPYHGMHGG------GPGGPGGGPHSFPHPLPSLTGG 407
Query: 1018 STAGPQQQQPAGAPQPGAVPPGVPPPGPHGPSPFPNQQTPPSMMP--GAVP-GSG----- 1069
P Q P G P P PP PPP GP P P PP M G+ P GSG
Sbjct: 408 HGGHPMQHNPNGPPPPWMQPP--PPPMNQGPHP-PGHHGPPPMDQYLGSTPVGSGVYRLH 464
Query: 1070 -HPGVAGNAPLGLPFGMPPPPPPPA--PSIIPFGSLADSISINLPAPPNLHGHHHHLPFA 1126
G+ P+G+ MPPPPPPP+ P P G P PP
Sbjct: 465 QGKGMMPPPPMGM---MPPPPPPPSGQPPPPPSG----------PLPPWQQQQQQ----- 506
Query: 1127 PGTLPPPNLPVSMANPLHPNLPATTTMPS----SLPLGPGLGSAAAQSPAIVAAVQGN-- 1180
P PPP+ ++ + PL TTT S S+P +AAA SP +QGN
Sbjct: 507 PPPPPPPSSSMASSTPLPWQQNTTTTTTSAGTGSIPPWQQQQAAAAASPG-APQMQGNPT 565
Query: 1181 ---LLPSASPLPDPGTPLPPDPTAPSPGTVTPVPPP 1213
L P P PG P PP P P + PPP
Sbjct: 566 MVPLPPGVQPPLPPGAPPPPPPPPPGSAGMMYAPPP 601
Score = 72.0 bits (175), Expect = 3e-12
Identities = 55/160 (34%), Positives = 63/160 (39%), Gaps = 27/160 (16%)
Query: 961 PPPALPPGSQPIPPTGAAGPPAVHGLAVAP---------ASVVPAP-------AGSGAPP 1004
PPP PP QP PP PP P AS P P + A
Sbjct: 479 PPPPPPPSGQPPPPPSGPLPPWQQQQQQPPPPPPPSSSMASSTPLPWQQNTTTTTTSAGT 538
Query: 1005 GSLGPSEQIGQAGSTAGPQQQQPAGAPQPGAVPPGVPPPGPHGPSPFPN---------QQ 1055
GS+ P +Q QA + A P Q G P +PPGV PP P G P P
Sbjct: 539 GSIPPWQQ-QQAAAAASPGAPQMQGNPTMVPLPPGVQPPLPPGAPPPPPPPPPGSAGMMY 597
Query: 1056 TPPSMMPGAVPGSGHPGVAGNAPLGLP-FGMPPPPPPPAP 1094
PP P + S + G G+P FGMPP PPPP P
Sbjct: 598 APPPPPPPPMDPSNFVTMMGMGVAGMPPFGMPPAPPPPPP 637
Score = 67.0 bits (162), Expect = 1e-10
Identities = 67/248 (27%), Positives = 82/248 (33%), Gaps = 24/248 (9%)
Query: 955 HQQQQQPPPALPPGSQPIPPTGAAG--PPAVHGLAVAPASVVPAPAGSGAPPGSLGPSEQ 1012
H Q P PP QP PP G PP HG + P GSG
Sbjct: 411 HPMQHNPNGPPPPWMQPPPPPMNQGPHPPGHHGPPPMDQYLGSTPVGSG----------- 459
Query: 1013 IGQAGSTAGPQQQQPAG-APQPGAVPPGVPPPGPHGPSPFPNQQTPPSMMPGAVPGSGHP 1071
+ + G P G P P P G PPP P GP P P QQ P P S
Sbjct: 460 VYRLHQGKGMMPPPPMGMMPPPPPPPSGQPPPPPSGPLP-PWQQQQQQPPPPPPPSS--- 515
Query: 1072 GVAGNAPLGLPFGMPPPPPPPAPSIIPFGSLADSISINLPAPPNLHGHHHHLPFAPGTLP 1131
+A + PL IP + + P P + G+ +P PG P
Sbjct: 516 SMASSTPLPWQQNTTTTTTSAGTGSIPPWQQQQAAAAASPGAPQMQGNPTMVPLPPGVQP 575
Query: 1132 PPNLPVSMANPLHPNLPATTTMPSSLPLGPGLGSAAAQSPAIVAAVQGNLLPSASPLPDP 1191
P LP P P P + M + P P P+ + G + P P
Sbjct: 576 P--LPPGAPPPPPPPPPGSAGMMYAPPPPP----PPPMDPSNFVTMMGMGVAGMPPFGMP 629
Query: 1192 GTPLPPDP 1199
P PP P
Sbjct: 630 PAPPPPPP 637
>gi|21361376 splicing factor 3a, subunit 2 [Homo sapiens]
Length = 464
Score = 89.7 bits (221), Expect = 1e-17
Identities = 99/294 (33%), Positives = 122/294 (41%), Gaps = 58/294 (19%)
Query: 945 RARQQHFQQMHQQQQQPP-----PALPPGSQPIPPTGAAGPPAVHGLAVAPASVVPAPAG 999
R +Q F Q H + ++PP PA PPG + PP G P L P S+ P P G
Sbjct: 201 RETKQFFLQFHFKMEKPPAPPSLPAGPPGVKRPPPPLMNGLPPRPPL---PESLPPPPPG 257
Query: 1000 SGAPPGSLGPSEQIGQAGSTAGPQQQQPAGAPQPGAVPPGVPPPGPHGPSPFPNQQTPPS 1059
G P + P+ GP P G PQ PGV PP P P P
Sbjct: 258 -GLPLPPMPPT----------GPAPSGPPGPPQLPPPAPGVHPPAPVVHPPASGVHPP-- 304
Query: 1060 MMPGAVPGSGHPGVAGNAPLGLP--FGMPPPPP---PPAPSIIPFGSLADSISINLPAPP 1114
PG P + PGV AP P G+ PP P PPAP + P + ++ PAP
Sbjct: 305 -APGVHPPA--PGVHPPAPGVHPPTSGVHPPAPGVHPPAPGVHP-----PAPGVHPPAP- 355
Query: 1115 NLHGHHHHLPFAPGTLPPPNLPVSMANP-LHPNLPAT-TTMPSSLPLGPGLGSAA----A 1168
G H P APG PPP+ V P +HP PA P P PG+ A
Sbjct: 356 ---GVH---PPAPGVHPPPSAGVHPQAPGVHPAAPAVHPQAPGVHPPAPGMHPQAPGVHP 409
Query: 1169 QSPAIVAAVQG------NLLPSASPLPDPGTPLPP--DPTAPS--PGTVTPVPP 1212
Q P + + G + PS +P P TP+PP P PS PG + P PP
Sbjct: 410 QPPGVHPSAPGVHPQPPGVHPS-NPGVHPPTPMPPMLRPPLPSEGPGNIPPPPP 462
Score = 34.3 bits (77), Expect = 0.74
Identities = 26/63 (41%), Positives = 29/63 (46%), Gaps = 5/63 (7%)
Query: 1154 PSSLPLGPGLGSAAAQSPAIVAAVQGNLLPSASPLPDP-GTPLPP-DPTAPSPGTVTPVP 1211
P SLP GP G P + LP + P P P G PLPP PT P+P P
Sbjct: 220 PPSLPAGPP-GVKRPPPPLMNGLPPRPPLPESLPPPPPGGLPLPPMPPTGPAPS--GPPG 276
Query: 1212 PPQ 1214
PPQ
Sbjct: 277 PPQ 279
>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapiens]
Length = 1124
Score = 89.4 bits (220), Expect = 2e-17
Identities = 88/279 (31%), Positives = 109/279 (39%), Gaps = 52/279 (18%)
Query: 960 QPPPALPPGSQPIPPTGAAGPPAVHGLAV----APASVVPAPAGSG--APPGSLGPSEQI 1013
Q PP+ PP S P+ P P A + LAV AP S P+P +PP S S
Sbjct: 631 QAPPS-PPASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSP-- 687
Query: 1014 GQAGSTAGPQQQQPAGAPQPGAVPPGVPPPGPHGPSPFPNQQTPPSMMPGAVPGSGHPGV 1073
S P Q P+ A P VPP P P PS P Q PP P A P P
Sbjct: 688 ----SATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPP---PLAAPPLQVPPS 740
Query: 1074 AGNAPLGLPFGMPPPPPPPAPSIIPFGSLADSISINLPAPPNLHGHHHHLPFAPGTLPPP 1133
+P P PPP PP + P P+PP LP +P PPP
Sbjct: 741 PPASPPMSPSATPPPRVPPLLAAPPLQV--------PPSPP------ASLPMSPLAKPPP 786
Query: 1134 NLPVSMANPLHPNLP---------ATTTMPSSLPLGPGLGSAAAQSPAIVAAVQGNLLPS 1184
P ++A P LP A + +SLP+ P L + Q+P ++AA + P
Sbjct: 787 QAPPALATPPLQALPSPPASFPGQAPFSPSASLPMSP-LATPPPQAPPVLAAPLLQVPP- 844
Query: 1185 ASPLPDPGTPLPPDPTAPSPGT----------VTPVPPP 1213
SP P P P P P T + P PPP
Sbjct: 845 -SPPASPTLQAPRRPPTPGPDTSVSGPRLTLALAPGPPP 882
Score = 80.9 bits (198), Expect = 7e-15
Identities = 80/274 (29%), Positives = 104/274 (37%), Gaps = 34/274 (12%)
Query: 964 ALPPGSQPIPPTGAAGPPAVHGLAVAPASVVPAPAGSGAPP----GSLGPSE-QIGQAGS 1018
+L S P + PP ++AP S+ PA PP SL P Q A
Sbjct: 494 SLASHSPQAPLSSLIMPPLETQSSLAPPSLQTPPASLTTPPLENLPSLAPPPLQTASAPL 553
Query: 1019 TAGPQQQQPAGAPQPGAVPPG---VPPPGPHGPSPFPNQQTPPSMMPGAVPGSGHPGVAG 1075
T + P AP P PP PPP P Q PP++ + G P ++
Sbjct: 554 TTPHLETPPCPAPCPLQAPPSPLTTPPPETPSSIATPPPQAPPALASPPLQGLPSPPLSP 613
Query: 1076 NA--------PLGLPFGMPPPPPPPAPSIIPFGSLADSISINLPAPPNLHGHHHHLPFAP 1127
A L LP PP PP +P + P + + AP L H PF+P
Sbjct: 614 LATPPPQAPPXLALPPLQAPPSPPASPPLSPLATPSPQ------APNALAVHLLQAPFSP 667
Query: 1128 GTLPPPNLPVSMANPLHPNLPATTTMPSSLPLGPGLGSAAAQSPAIVAAVQGNLLPSASP 1187
PP P S P P + + T PS P P L + Q P A + PSA+P
Sbjct: 668 PPSPPVQAPFS--PPASPPVSPSATPPSQAP--PSLAAPPLQVPPSPPA-SPPMSPSATP 722
Query: 1188 LPDPGTPL-------PPDPTAPSPGTVTPVPPPQ 1214
P PL PP P A P + + PPP+
Sbjct: 723 PPQAPPPLAAPPLQVPPSPPASPPMSPSATPPPR 756
Score = 76.6 bits (187), Expect = 1e-13
Identities = 83/291 (28%), Positives = 106/291 (36%), Gaps = 55/291 (18%)
Query: 960 QPPPALPPGSQPIPPTGAAGPPAVHGLAVAPASVVPAPAGSGAPPGSLGPSEQIGQAGST 1019
+ PP P PP+ PP P+S+ P APP P Q G
Sbjct: 559 ETPPCPAPCPLQAPPSPLTTPPPE-----TPSSIATPPPQ--APPALASPPLQ-GLPSPP 610
Query: 1020 AGPQQQQPAGAPQPGAVPPGVPPPGPHGPSPFPNQQTPPSMMPGAV-------PGSGHPG 1072
P P AP A+PP PP P P TP P A+ P S P
Sbjct: 611 LSPLATPPPQAPPXLALPPLQAPPSPPASPPLSPLATPSPQAPNALAVHLLQAPFSPPP- 669
Query: 1073 VAGNAPLGLPFGMPPPPPPPAPSIIPFGSLADSISI-NLPAPPNLHGHHHHLPFAPGTLP 1131
+ P+ PF PP PP +PS P S++ L PP+ P +P P
Sbjct: 670 ---SPPVQAPFS-PPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASP---PMSPSATP 722
Query: 1132 PPNLPVSMANP---LHPNLPATTTM-------------------------PSSLPLGPGL 1163
PP P +A P + P+ PA+ M P+SLP+ P L
Sbjct: 723 PPQAPPPLAAPPLQVPPSPPASPPMSPSATPPPRVPPLLAAPPLQVPPSPPASLPMSP-L 781
Query: 1164 GSAAAQSPAIVAAVQGNLLPSASPLPDPGTPLPPDPTAPSPGTVTPVPPPQ 1214
Q+P +A LPS P PG P P+A P + PPPQ
Sbjct: 782 AKPPPQAPPALATPPLQALPS-PPASFPG-QAPFSPSASLPMSPLATPPPQ 830
Score = 72.4 bits (176), Expect = 2e-12
Identities = 86/306 (28%), Positives = 111/306 (36%), Gaps = 72/306 (23%)
Query: 962 PPALPPGS-QPIPPTGAAGPPAVHGLAVAPASVVPAPAGSGAPPGSLGPSEQIGQAGSTA 1020
PPA PP S PP A P LA P V P+P S PP + S
Sbjct: 710 PPASPPMSPSATPPPQAPPP-----LAAPPLQVPPSPPAS--PP----------MSPSAT 752
Query: 1021 GPQQQQPAGAPQPGAVPPGVPPPGPHGPSPFPNQQTPPSMM----------PGAVPGSGH 1070
P + P A P VPP P P P P Q PP++ P + PG
Sbjct: 753 PPPRVPPLLAAPPLQVPPSPPASLPMSPLAKPPPQAPPALATPPLQALPSPPASFPGQAP 812
Query: 1071 PGVAGNAPLGLPFGMPPPPPPP---APSIIPFGSLADSISINLPAPP-------NLHGHH 1120
+ + P+ P PPP PP AP + S S ++ P P ++ G
Sbjct: 813 FSPSASLPMS-PLATPPPQAPPVLAAPLLQVPPSPPASPTLQAPRRPPTPGPDTSVSGPR 871
Query: 1121 HHLPFAPGTLPPPNLPVS--MANP-LHPNLPATTTMPSSL---PLGPGLGSAAAQSPAIV 1174
L APG PPP+ S ++ P L + + T+ P L GP G+AA+ P
Sbjct: 872 LTLALAPGPPPPPSRSPSSTLSGPDLAGHSSSATSTPEELRGYDSGPEGGAAASPPPDAE 931
Query: 1175 AAVQGNLLPSASPLPD------PGTPLP---------------------PDPTAPSPGTV 1207
A S P P PG PLP P+ P+PG +
Sbjct: 932 LAACHPAAWSRGPAPPLAFRGAPGAPLPWPPATGPGSADGLCTIYETEGPESATPAPGAL 991
Query: 1208 TPVPPP 1213
P P P
Sbjct: 992 DPGPSP 997
Score = 70.5 bits (171), Expect = 9e-12
Identities = 70/255 (27%), Positives = 90/255 (35%), Gaps = 30/255 (11%)
Query: 960 QPPPALPPGSQPIPPTGAAGPPAVHGLAVAPASVVPAPAGSGAPPGSLGPSEQIGQAGST 1019
Q PP+ PP S P+ P P A LA P +P+P S PS + +
Sbjct: 767 QVPPS-PPASLPMSPLAKPPPQAPPALATPPLQALPSPPASFPGQAPFSPSASLPMSPLA 825
Query: 1020 AGPQQQQPAGAPQPGAVPPGVPPPGPHGPSPFPNQQTPPSMMPGAVPGSGHPGVAGNAPL 1079
P Q P A VPP PP P +P + PP+ PG L
Sbjct: 826 TPPPQAPPVLAAPLLQVPPS-PPASPTLQAP----RRPPT------PGPDTSVSGPRLTL 874
Query: 1080 GLPFGMPPPPPPPAPSIIPFGSLADSISINLPAPPNLHGHHHHLPFAPGTLPPPNLPVSM 1139
L G PPPP S + LA S P L G+ PPP+ ++
Sbjct: 875 ALAPGPPPPPSRSPSSTLSGPDLAGHSSSATSTPEELRGYDSGPEGGAAASPPPDAELAA 934
Query: 1140 ANPL------HPNLPATTTMPSSLPLGPGLGSAAAQSPAIVAAVQGNLLPSASPLPDPGT 1193
+P P L + LP P G +A + +G P+ T
Sbjct: 935 CHPAAWSRGPAPPLAFRGAPGAPLPWPPATGPGSADGLCTIYETEG---------PESAT 985
Query: 1194 PLPP--DPTAPSPGT 1206
P P DP PSPGT
Sbjct: 986 PAPGALDP-GPSPGT 999
Score = 61.2 bits (147), Expect = 6e-09
Identities = 70/285 (24%), Positives = 97/285 (34%), Gaps = 34/285 (11%)
Query: 960 QPPPALPPGSQPIPPTGAAGPPAVHGLAV------APASVVPAPAGSGAPPGSLGPSEQI 1013
+P P + P+P T PP L + AP S+ P+ PP PS
Sbjct: 315 RPVPPPDNAATPLPATLPPSPPLATPLPLAPPSPSAPPSLQTLPSPPATPPSQAPPSMTT 374
Query: 1014 GQAGSTAGPQQQQPAGAPQPGAVPPGVPPPGP--------------------HGPSPFPN 1053
+ Q P P P PP P H
Sbjct: 375 PPMQAPPSLQTIPPIQVPHSLTSPSLQAPPSPLALSSLQATTSLGSPTLQATHSFLTMSP 434
Query: 1054 QQTPPSMMPGAVPGSGHPGVAGNAPLGLPFGMPPPPPPPAPSIIPFGSLADSISIN-LPA 1112
+QT S+ + P S P + PL P +P PP L+ ++I+ L A
Sbjct: 435 RQTQASLTSPSRPASTPP---DSPPLQAPLSLPASPPLQTSLSPAVSPLSSPLTIHPLQA 491
Query: 1113 PPNLHGHHHHLPFAPGTLPPPNLPVSMANPLHPNLPATTTMP--SSLPLGPGLGSAAAQS 1170
+L H P + +PP S+A P PA+ T P +LP A +
Sbjct: 492 LSSLASHSPQAPLSSLIMPPLETQSSLAPPSLQTPPASLTTPPLENLPSLAPPPLQTASA 551
Query: 1171 PAIVAAVQGNLLPSASPLPDPGTPL--PPDPTAPSPGTVTPVPPP 1213
P ++ P+ PL P +PL PP T S T P PP
Sbjct: 552 PLTTPHLETPPCPAPCPLQAPPSPLTTPPPETPSSIATPPPQAPP 596
Score = 56.6 bits (135), Expect = 1e-07
Identities = 78/274 (28%), Positives = 104/274 (37%), Gaps = 43/274 (15%)
Query: 974 PTGAAGP--PAVHGL-AVAPASVVPAPAGSGAPPGSLGPSEQIGQAGSTAGPQQQQPAGA 1030
P A P P GL A+ P V P P AP +LGP A + + +P
Sbjct: 263 PRAPAHPSQPKPKGLQALRPPQVTP-PRKDAAP--ALGPLSSSPLATPSPSGTKARPVPP 319
Query: 1031 PQPGAVP-PGVPPPGPHGPSPFP----NQQTPPSMM----PGAVPGSGHPGVAGNAPLGL 1081
P A P P PP P +P P + PPS+ P A P S P P+
Sbjct: 320 PDNAATPLPATLPPSPPLATPLPLAPPSPSAPPSLQTLPSPPATPPSQAPPSMTTPPMQA 379
Query: 1082 PFGMPPPPP--------------PPAPSIIPFGSLADSISINLPAPPNLHGHHHHLPFAP 1127
P + PP PP+P + SL + S+ P L H L +P
Sbjct: 380 PPSLQTIPPIQVPHSLTSPSLQAPPSP--LALSSLQATTSL---GSPTLQATHSFLTMSP 434
Query: 1128 ----GTLPPPNLPVSMANPLHPNLPATTTMPSSLPLGPGLGSAAA--QSPAIVAAVQG-N 1180
+L P+ P S P P L A ++P+S PL L A + SP + +Q +
Sbjct: 435 RQTQASLTSPSRPAS-TPPDSPPLQAPLSLPASPPLQTSLSPAVSPLSSPLTIHPLQALS 493
Query: 1181 LLPSASP-LPDPGTPLPPDPTAPSPGTVTPVPPP 1213
L S SP P +PP T S + PP
Sbjct: 494 SLASHSPQAPLSSLIMPPLETQSSLAPPSLQTPP 527
Score = 50.1 bits (118), Expect = 1e-05
Identities = 73/292 (25%), Positives = 103/292 (35%), Gaps = 37/292 (12%)
Query: 959 QQPPPALPPGSQPIPPTGAA------GPPAVHGL------AVAPASVVPAP------AG- 999
++ PPA P+ G A GP GL VA AP AG
Sbjct: 101 ERAPPAKNTSPGPVSSPGRASGTTRPGPLGQKGLRISAEETVARGKATEAPKRSALSAGA 160
Query: 1000 ----SGAPPGSLGPS--EQIGQAGSTAGPQQQQPAGAPQPGAVPP--GVPPPGPHGPS-P 1050
SG PG+ P+ + AG+ G + P+ P+P P V H + P
Sbjct: 161 RRDTSGPTPGTPSPAMARRSRAAGTEVGLPRPAPSARPRPPTEGPRKSVSSASEHSTTEP 220
Query: 1051 FPNQQTPPSMMPGAVPGSGHPGVAGNAPLGLPFGMPPP----PPPPAPSIIPFGSLADSI 1106
P + PS G + + PL P P P PA P ++
Sbjct: 221 SPAARRRPSAGGGLQRPASRSLSSSATPLSSPARSGPSARGTPRAPAHPSQPKPKGLQAL 280
Query: 1107 SINLPAPPNLHGHHHHLPFAPGTLPPPNLPVSMANPLHPNLPATTTMPSSLPLGPGLGS- 1165
PP P + L P+ + A P+ P A T +P++LP P L +
Sbjct: 281 RPPQVTPPRKDAAPALGPLSSSPLATPSPSGTKARPVPPPDNAATPLPATLPPSPPLATP 340
Query: 1166 --AAAQSPAIVAAVQGNLLPSASP--LPDPGTPLPPDPTAPSPGTVTPVPPP 1213
A SP+ ++Q P A+P P PP PS T+ P+ P
Sbjct: 341 LPLAPPSPSAPPSLQTLPSPPATPPSQAPPSMTTPPMQAPPSLQTIPPIQVP 392
Score = 45.8 bits (107), Expect = 2e-04
Identities = 73/295 (24%), Positives = 98/295 (33%), Gaps = 78/295 (26%)
Query: 978 AGPPAVHGLAVAPASVVPAPAGSGAPPGSLGPS--EQIGQAGSTAGPQQQQPAGAPQPGA 1035
AG A A AP + P P GS PP + P+ +G AG+ + AG
Sbjct: 10 AGAAARTPAARAPGLLTPRPPGSPRPPPPVTPAALRVLGAAGAVGRKPLAERAGGIGGAT 69
Query: 1036 VPPGVPPPGP--------HGPS-------------PFPNQQTPPSMMPGAVPGSGHPGVA 1074
+P P GP P+ P N P PG G+ PG
Sbjct: 70 IPESAPRAGPTRSAGTSSRNPASRPPASGRGERAPPAKNTSPGPVSSPGRASGTTRPGPL 129
Query: 1075 GNAPL----------GLPFGMP---------------PPPPPPAPSIIPFGSLADSISIN 1109
G L G P P P P+P++ S A +
Sbjct: 130 GQKGLRISAEETVARGKATEAPKRSALSAGARRDTSGPTPGTPSPAMAR-RSRAAGTEVG 188
Query: 1110 LPAP-PNLHGHHHHLPFAPGTLPPPNLPVSMANPLHPNLPATTTMPSSLPLGPGLGSAAA 1168
LP P P+ P P P ++ + + PA PS+ G GL A+
Sbjct: 189 LPRPAPSAR------PRPPTEGPRKSVSSASEHSTTEPSPAARRRPSA---GGGLQRPAS 239
Query: 1169 QSPAIVAAVQGNLLPSASPLPDP--------GTP-LPPDPTAPSPGTVTPVPPPQ 1214
+S L SA+PL P GTP P P+ P P + + PPQ
Sbjct: 240 RS----------LSSSATPLSSPARSGPSARGTPRAPAHPSQPKPKGLQALRPPQ 284
>gi|163965366 nascent polypeptide-associated complex alpha subunit
isoform a [Homo sapiens]
Length = 2078
Score = 88.2 bits (217), Expect = 4e-17
Identities = 79/257 (30%), Positives = 95/257 (36%), Gaps = 44/257 (17%)
Query: 974 PTGAAGPPAVHGLAVAPASVVPAPAGSGAPPGSLGPSEQIGQAGSTAGPQQQQPAGAPQP 1033
P A PA G+ PAS P+P G+ PP + PS + GP P AP P
Sbjct: 918 PKKARATPAPKGI---PAS--PSPKGAPTPPAATPPSPK-------GGPATPSPKWAPTP 965
Query: 1034 GAVPPGVPPPGPHGPSPFPNQQTPPSMMPGAVPGSGHPGVAGNAPLGLPFGMPPPP---- 1089
A P P GP PSP TPP+ P P G P G P PP
Sbjct: 966 PAATPPSPKGGPATPSP-KGAPTPPAATP--------PSPKGGPATPSPKGAPTPPAVTP 1016
Query: 1090 --PPPAPSIIPFGSLADSISINLPAPPNLHGHHHHLPFAPGTLPPPNLPVSMANPLHPNL 1147
P +P+ PF A + P P LP T P LP P P+L
Sbjct: 1017 PSPKGSPAATPFPKGASTPPAATPPSPKGSPAATPLPKGAPTTPAATLPSPKGGPATPSL 1076
Query: 1148 PATTTMPSSLPLGPGLGSAAAQSPAIVAAVQGNLLPSASPLPDP----------GTPLPP 1197
T P++ P P G A SP +G +P A+ P P G P P
Sbjct: 1077 KGAPTPPAATPPSP-KGGPATPSP------KGAPMPPAATPPSPKGGLATPPHKGAPTTP 1129
Query: 1198 DPTAPSPGTVTPVPPPQ 1214
T PSP PPP+
Sbjct: 1130 AATPPSPKGGLATPPPK 1146
Score = 84.0 bits (206), Expect = 8e-16
Identities = 81/263 (30%), Positives = 98/263 (37%), Gaps = 44/263 (16%)
Query: 961 PPPALPPGSQPIP----PTGAAGPPAVHGLAVAPASVVPAPAGSGAPPGSLGPSEQIGQA 1016
PP A PP + P P A PPA + P+P G+ PP + PS +
Sbjct: 942 PPAATPPSPKGGPATPSPKWAPTPPAATPPSPKGGPATPSPKGAPTPPAATPPSPK---- 997
Query: 1017 GSTAGPQQQQPAGAPQPGAVPPGVPPPGPHG---PSPFP-NQQTPPSMMPGAVPGSGHPG 1072
GP P GAP PP V PP P G +PFP TPP+ P + GS
Sbjct: 998 ---GGPATPSPKGAP----TPPAVTPPSPKGSPAATPFPKGASTPPAATPPSPKGS---- 1046
Query: 1073 VAGNAPLGLPFGMPPPPPPPAPSIIPFGSLADSISINLPAPPNLHGHHHHLPFAPGTLPP 1132
A LP G P P PS P G PA P+L G P P PP
Sbjct: 1047 ---PAATPLPKGAPTTPAATLPS--PKGG---------PATPSLKG----APTPPAATPP 1088
Query: 1133 -PNLPVSMANPLHPNLPATTTMPSSLPLGPGLGSAAAQSPAIVAAVQGNLLPSASPLPDP 1191
P + +P +P T PS P G +P AA + + P
Sbjct: 1089 SPKGGPATPSPKGAPMPPAATPPS--PKGGLATPPHKGAPTTPAATPPSPKGGLATPPPK 1146
Query: 1192 GTPLPPDPTAPSPGTVTPVPPPQ 1214
G P P T PSP PPP+
Sbjct: 1147 GAPTTPAATPPSPKGGLATPPPK 1169
Score = 82.8 bits (203), Expect = 2e-15
Identities = 87/298 (29%), Positives = 105/298 (35%), Gaps = 51/298 (17%)
Query: 966 PPGSQPIPPTGA-AGPPAVHGLAVAPASVVPAPAGSGAPPGSLG-PSEQIGQAGST-AGP 1022
PP + P P G+ A P G PA+ +P+P G A P G P+ S GP
Sbjct: 1035 PPAATPPSPKGSPAATPLPKGAPTTPAATLPSPKGGPATPSLKGAPTPPAATPPSPKGGP 1094
Query: 1023 QQQQPAGAPQPGAVPPGVPPPG----PHGPSPFPNQQTPPSMMPGAV--PGSGHPGVAGN 1076
P GAP P A P P G PH +P TPPS G P G P
Sbjct: 1095 ATPSPKGAPMPPAATPPSPKGGLATPPHKGAPTTPAATPPSPKGGLATPPPKGAPTTPAA 1154
Query: 1077 APLGLPFGMPPPPPPPAPSI------IPFGSLADSISINLPA-----PPNLHG-----HH 1120
P G+ PPP AP+ P G LA P PP+ G
Sbjct: 1155 TPPSPKGGLATPPPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGLATPSP 1214
Query: 1121 HHLPFAPGTLPP--------------PNLPVSM-----ANPLHPNLPATTTMPSSLP--L 1159
P P PP P P + P P T P++ P L
Sbjct: 1215 KGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGPATPPPKGAPTPPAATPPSL 1274
Query: 1160 GPGLGSA---AAQSPAIVAAVQGNLLPSASPLPDPGTPLPPDPTAPSPGTVTPVPPPQ 1214
GL + A +PA+V P+ SP G P PP T PSP PPP+
Sbjct: 1275 KGGLATPPHKGAPNPAVVTPPSPKGGPATSP--PKGAPTPPAATPPSPKGSPGTPPPK 1330
Score = 78.6 bits (192), Expect = 3e-14
Identities = 82/282 (29%), Positives = 107/282 (37%), Gaps = 46/282 (16%)
Query: 961 PPPALP--PGSQPIPPTGAAGPPAVHGLAVAPASV---------VPAPAGSGAPPGSLGP 1009
PP P P + P P G P+ G PA+ P+P G+ P + P
Sbjct: 1167 PPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPP 1226
Query: 1010 SEQIGQAGSTAGPQQQQPAGAPQPGAVPPGVPPPGPHGP----SPFPNQQTPPSMMPGAV 1065
S + G A P P GAP A P P GP P +P P TPPS+ G
Sbjct: 1227 SPK----GGLATP---SPKGAPTTPAATPPSPKGGPATPPPKGAPTPPAATPPSLKGGLA 1279
Query: 1066 --PGSGHPG---VAGNAPLGLPFGMPP---PPPPPAPSIIPFGSLADSISINLPAPPNLH 1117
P G P V +P G P PP P PP A P GS P PP +
Sbjct: 1280 TPPHKGAPNPAVVTPPSPKGGPATSPPKGAPTPPAATPPSPKGSPGTPPPKGAPTPPAV- 1338
Query: 1118 GHHHHLPFAPGTLP--PPNLPVSMANPLHPNLPATTTMPSSLPL---GPGLGSAAAQSPA 1172
P +P P P P S P P+ T P++ P GP + + +
Sbjct: 1339 -----TPPSPKGTPTLPATTPSSKGGPTTPSSKEGPTPPAATPSHKGGPAMTPPSPKRGP 1393
Query: 1173 IVAAVQGNLLPSA----SPLPDPGTPLPPDPTA-PSPGTVTP 1209
+ + +G+ A SP P TP+ + A PS G +TP
Sbjct: 1394 AIPSPKGDPTSPAVIPLSPKKAPATPVTREGAATPSKGDLTP 1435
Score = 78.2 bits (191), Expect = 4e-14
Identities = 81/293 (27%), Positives = 98/293 (33%), Gaps = 52/293 (17%)
Query: 957 QQQQPPPALPPGSQPIPPTGAAGPPAVHGLA----VAPASVVPAPAGSGAPPGSLGP--- 1009
Q + PA P P GA P AV L+ P P P+ P GP
Sbjct: 844 QGSKDSPATTHSPTPPSPKGAPTPSAVTPLSPKGVTLPPKETPTPSVVNLPFPKEGPATP 903
Query: 1010 -----------SEQIGQAGSTAGPQ----QQQPAGAPQPGAVPPGVPPPGPHGPSPFPNQ 1054
S +A +T P+ P GAP P A P P GP PSP
Sbjct: 904 APKQAPALSMTSSSPKKARATPAPKGIPASPSPKGAPTPPAATPPSPKGGPATPSP-KWA 962
Query: 1055 QTPPSMMPGAVPGSGHPGVAGNAPLGLPFGMPPPPPPPAPSIIPFGSLADSISINLPAPP 1114
TPP+ P P G P G P PP PS P G A P PP
Sbjct: 963 PTPPAATP--------PSPKGGPATPSPKGAPTPPAATPPS--PKGGPATPSPKGAPTPP 1012
Query: 1115 NL-----HGHHHHLPFAPGTLPPPNLPVSMANPLHPNLPATTTMPSSLPLGPGLGSAAAQ 1169
+ G PF G PP + P PA T +P P P + +
Sbjct: 1013 AVTPPSPKGSPAATPFPKGASTPP----AATPPSPKGSPAATPLPKGAPTTPAATLPSPK 1068
Query: 1170 SPAIVAAVQGNLLPSASPLPDP----------GTPLPPDPTAPSPGTVTPVPP 1212
+++G P A+ P P G P+PP T PSP PP
Sbjct: 1069 GGPATPSLKGAPTPPAATPPSPKGGPATPSPKGAPMPPAATPPSPKGGLATPP 1121
Score = 78.2 bits (191), Expect = 4e-14
Identities = 83/266 (31%), Positives = 101/266 (37%), Gaps = 43/266 (16%)
Query: 965 LPPGSQPIPPTGAAGPPAVHGLAVAPASVVPAPAG---------SGAPPGSLGPSEQIGQ 1015
+PP + P P G P G PA+ P+P G + P + PS +
Sbjct: 1104 MPPAATPPSPKGGLATPPHKGAPTTPAATPPSPKGGLATPPPKGAPTTPAATPPSPK--- 1160
Query: 1016 AGSTAGPQQQQPAGAPQPGAVPPGVPPPGPHGPSPFPNQQTPPSMMPGAVPGSGHPGVAG 1075
G A P P GAP P PP P G P+ + P+ P A P S G+A
Sbjct: 1161 -GGLATP---PPKGAP----TTPAATPPSPKGGLATPSPKGAPT-TPAATPPSPKGGLAT 1211
Query: 1076 NAPLGLPFGMPPPPPPPAPSIIPFGSLADSISINLP-----APPNLHGHHHHLP----FA 1126
+P G P P PP+P G LA P PP+ G P
Sbjct: 1212 PSPKGAP--TTPAATPPSPK----GGLATPSPKGAPTTPAATPPSPKGGPATPPPKGAPT 1265
Query: 1127 PGTLPPPNLPVSMANPLH---PNLPATTTMPSSLPLGPGLGSAAAQSPAIVAAVQGNLLP 1183
P PP+L +A P H PN PA T PS P G S +P AA +
Sbjct: 1266 PPAATPPSLKGGLATPPHKGAPN-PAVVTPPS--PKGGPATSPPKGAPTPPAATPPSPKG 1322
Query: 1184 SASPLPDPGTPLPPDPTAPSP-GTVT 1208
S P G P PP T PSP GT T
Sbjct: 1323 SPGTPPPKGAPTPPAVTPPSPKGTPT 1348
Score = 70.1 bits (170), Expect = 1e-11
Identities = 85/271 (31%), Positives = 96/271 (35%), Gaps = 38/271 (14%)
Query: 973 PPT--GAAGPPAVHGLAVAPASVVPAPAGSGAPPGSLGPSEQIGQAGSTAGPQQQQPAGA 1030
PPT G+AGP G +P S V A S P SL +T P P GA
Sbjct: 808 PPTKKGSAGPDTPIGNLSSPVSPVEA---SFLPENSLSFQGSKDSPATTHSPTPPSPKGA 864
Query: 1031 PQPGAV----PPGVPPPGPHGPS------PFPNQ--QTP-PSMMPGAVPGSGHP--GVAG 1075
P P AV P GV P P+ PFP + TP P P S P A
Sbjct: 865 PTPSAVTPLSPKGVTLPPKETPTPSVVNLPFPKEGPATPAPKQAPALSMTSSSPKKARAT 924
Query: 1076 NAPLGLPFGMPP---PPPPPAPSIIPFGSLADSISINLPAPPNL------HGHHHHLPFA 1126
AP G+P P P PP A P G A P PP G P
Sbjct: 925 PAPKGIPASPSPKGAPTPPAATPPSPKGGPATPSPKWAPTPPAATPPSPKGGPATPSPKG 984
Query: 1127 PGTLPPPNLPVSMANPLHPNLPATTTMPSSLPLGPGLGSAA------AQSPAIVAAVQGN 1180
T P P P P+ T P+ P P AA A +P
Sbjct: 985 APTPPAATPPSPKGGPATPSPKGAPTPPAVTPPSPKGSPAATPFPKGASTPPAATPPSPK 1044
Query: 1181 LLPSASPLPDPGTPLPPDPTAPSP--GTVTP 1209
P+A+PLP G P P T PSP G TP
Sbjct: 1045 GSPAATPLP-KGAPTTPAATLPSPKGGPATP 1074
Score = 70.1 bits (170), Expect = 1e-11
Identities = 82/304 (26%), Positives = 109/304 (35%), Gaps = 53/304 (17%)
Query: 962 PPALPPGSQPIPPTGAAGPPAV------HGLAVAPASVVPAPAGSGAPPGSLGPSEQIGQ 1015
PP+ G PP GA PPA GLA P P PA P GP+ +
Sbjct: 1248 PPSPKGGPATPPPKGAPTPPAATPPSLKGGLATPPHKGAPNPAVVTPPSPKGGPATSPPK 1307
Query: 1016 AGST----------AGPQQQQPAGAPQPGAVPPGVPPPGPHGPSPFPNQQ---TPPSMMP 1062
T P P GAP P AV P P P P+ P+ + T PS
Sbjct: 1308 GAPTPPAATPPSPKGSPGTPPPKGAPTPPAVTPPSPKGTPTLPATTPSSKGGPTTPSSKE 1367
Query: 1063 GAVPGS------GHPGVAGNAPLGLPFGMPPPPPPPAPSIIPFG---SLADSISINLPAP 1113
G P + G P + +P P P P +P++IP + A ++ A
Sbjct: 1368 GPTPPAATPSHKGGPAMTPPSPKRGPAIPSPKGDPTSPAVIPLSPKKAPATPVTREGAAT 1427
Query: 1114 PNLHG------HHHHLPFAPGTLPPPNLPVSMANPLHPNLPATTTMPSSLPLGP---GLG 1164
P+ L AP T P P + ++ P LPA T P P
Sbjct: 1428 PSKGDLTPPAVTPVSLKKAPATSAPKGGPATPSSKGDPTLPAVTPPSPKEPPAPKQVATS 1487
Query: 1165 SAAAQSPAIVAAVQGNLLPSASPLPDPGTPLPP----DPTAP--------SPGTVTP--- 1209
S+ ++PA A + LP+ P P P DP AP +P T+ P
Sbjct: 1488 SSPKKAPATPAPMGAPTLPAVIPSSPKEVPATPSSRRDPIAPTATLLSKKTPATLAPKEA 1547
Query: 1210 -VPP 1212
+PP
Sbjct: 1548 LIPP 1551
Score = 69.7 bits (169), Expect = 2e-11
Identities = 84/316 (26%), Positives = 112/316 (35%), Gaps = 65/316 (20%)
Query: 962 PPALPPGSQPIPPTGAAGPPAVHG-LAVAPASVVPAPAGSGAPPGSLGPSEQIGQAGST- 1019
P PP P PP AA PP++ G LA P P PA P GP+ + T
Sbjct: 1255 PATPPPKGAPTPP--AATPPSLKGGLATPPHKGAPNPAVVTPPSPKGGPATSPPKGAPTP 1312
Query: 1020 ---------AGPQQQQPAGAPQPGAVPPGVPPPGPHGPSPFPNQQ---TPPSMMPGAVPG 1067
P P GAP P AV P P P P+ P+ + T PS G P
Sbjct: 1313 PAATPPSPKGSPGTPPPKGAPTPPAVTPPSPKGTPTLPATTPSSKGGPTTPSSKEGPTPP 1372
Query: 1068 SGHPGVAGNAPLGLPF---GMPPPPP---PPAPSIIPFG---SLADSISINLPAPPNLHG 1118
+ P G + P G P P P +P++IP + A ++ A P+
Sbjct: 1373 AATPSHKGGPAMTPPSPKRGPAIPSPKGDPTSPAVIPLSPKKAPATPVTREGAATPSKGD 1432
Query: 1119 HHH------HLPFAPGTLPPPNLPVSMANPLHPNLPATTTMPSSLPLGP---GLGSAAAQ 1169
L AP T P P + ++ P LPA T P P S+ +
Sbjct: 1433 LTPPAVTPVSLKKAPATSAPKGGPATPSSKGDPTLPAVTPPSPKEPPAPKQVATSSSPKK 1492
Query: 1170 SPAIVAAVQGNLLPS---ASPLPDPGTP----------------------------LPPD 1198
+PA A + LP+ +SP P TP +PP
Sbjct: 1493 APATPAPMGAPTLPAVIPSSPKEVPATPSSRRDPIAPTATLLSKKTPATLAPKEALIPPA 1552
Query: 1199 PTAPSPGTVTPVPPPQ 1214
T PSP +P P+
Sbjct: 1553 MTVPSPKKTPAIPTPK 1568
Score = 56.2 bits (134), Expect = 2e-07
Identities = 66/267 (24%), Positives = 89/267 (33%), Gaps = 32/267 (11%)
Query: 973 PPTGAAGPPAVHGLAVAPASVVPAPAGSGAPPGSLG-----------PSEQIG--QAGST 1019
P G PPAV +++ A AP G A P S G P E Q ++
Sbjct: 1428 PSKGDLTPPAVTPVSLKKAPATSAPKGGPATPSSKGDPTLPAVTPPSPKEPPAPKQVATS 1487
Query: 1020 AGPQQQQPAGAPQPGAVPPGVPPPGPHGPSPFPNQQTPPSMMPGAVPGSGHPGVAGNAPL 1079
+ P++ AP P V P P P+ + P + P
Sbjct: 1488 SSPKKAPATPAPMGAPTLPAVIPSSPKEVPATPSSRRDPIAPTATLLSKKTPATLAPKEA 1547
Query: 1080 GLPFGMPPPPPPPAPSI-IPFGSLADSISINLPAPPNLHGHHHH---------LPFA--- 1126
+P M P P P+I P + A S +PP + + +P A
Sbjct: 1548 LIPPAMTVPSPKKTPAIPTPKEAPATPSSKEASSPPAVTPSTYKGAPSPKELLIPPAVTS 1607
Query: 1127 --PGTLPPPNLPVSMANPLHPNLPATTTMPSSLPLGPGLGSAAAQSPAIVAAVQGNLLPS 1184
P P P + P PA P+S P+ P + SPA V G +P
Sbjct: 1608 PSPKEAPTPPAVTPPSPEKGPATPAPKGTPTSPPVTPSSLKDSPTSPASVTCKMGATVPQ 1667
Query: 1185 ASPLPDPGTPLPPDPTAPSPGTVTPVP 1211
AS G P PTA V P P
Sbjct: 1668 AS----KGLPAKKGPTALKEVLVAPAP 1690
Score = 47.0 bits (110), Expect = 1e-04
Identities = 72/278 (25%), Positives = 90/278 (32%), Gaps = 51/278 (18%)
Query: 963 PALP-PGSQPIPPTG--AAGPPAVHGLAVAPASVVPAPAGSGAPPGSLGPSEQIGQAGST 1019
PA+P P P P+ A+ PPAV A P+P PP PS
Sbjct: 1562 PAIPTPKEAPATPSSKEASSPPAVTPSTYKGA---PSPKELLIPPAVTSPS--------- 1609
Query: 1020 AGPQQQQPAGAPQPGAVPPGVPPPGPHGPSPFPNQQTPP-----------------SMMP 1062
P AP P AV P P GP P+P +PP M
Sbjct: 1610 -------PKEAPTPPAVTPPSPEKGPATPAPKGTPTSPPVTPSSLKDSPTSPASVTCKMG 1662
Query: 1063 GAVPGSGHPGVAGNAPLGLPFGMPPPPPPPAPSII----PFGSLADSISINLPAPPNLHG 1118
VP + A P L + P P P I S + + P P+
Sbjct: 1663 ATVPQASKGLPAKKGPTALKEVLVAPAPESTPIITAPTRKGPQTKKSSATSPPICPDPSA 1722
Query: 1119 HHHHLPFAPGTLPPPNLPVSMANPLHPNLPATTTMPSSLPLGPGLGSAAAQSPAIVAAVQ 1178
+ P P LPV + + A S P GP + S + AA
Sbjct: 1723 KNGSKGPLSTVAPAPLLPVQKDS----SKTAKGKDASHSPKGPLAPPESKASTPLTAAAF 1778
Query: 1179 GNLLPSASPLPDPGTPLPPD--PTAPSPGTVTPVPPPQ 1214
+LP P PP P APSP V +PP Q
Sbjct: 1779 EKVLPKPESASVSAAPSPPVSLPLAPSP--VPTLPPKQ 1814
Score = 42.7 bits (99), Expect = 0.002
Identities = 72/302 (23%), Positives = 92/302 (30%), Gaps = 102/302 (33%)
Query: 971 PIPPTGAAGPPAVHGLAVAPASVVPAPAGSGAPPGSLGPSEQIGQAGSTAGPQQQQPAGA 1030
P+ PT + P V P+P + AP +L + +I P
Sbjct: 699 PLVPTASENCP-----------VAPSPQNTCAPLATLVLAPEI-------------PKSV 734
Query: 1031 PQPGAVPPGVPP-----------------------------------------------P 1043
P P P G PP P
Sbjct: 735 PSPSLPPAGTPPGTKKVDGISHTSALAPVASSPKECPTEDSGASATASSKGTLTYLADSP 794
Query: 1044 GPHGPSPFPNQQTPPSMMPGAVPGSGHPGVAGNAPLGLPFGMPPPPPPPAPSIIPFGSLA 1103
P G S P + PP+ A P + P+G + P P S +P SL+
Sbjct: 795 SPLGVSVSPQTKRPPTKKGSAGP---------DTPIG---NLSSPVSPVEASFLPENSLS 842
Query: 1104 ------DSISINLPAPPNLHG---HHHHLPFAPG--TLPPPNLPV-SMANPLHPNLPATT 1151
+ + P PP+ G P +P TLPP P S+ N P T
Sbjct: 843 FQGSKDSPATTHSPTPPSPKGAPTPSAVTPLSPKGVTLPPKETPTPSVVNLPFPKEGPAT 902
Query: 1152 TMPSSLPLGPGLGSAAAQSPAIVAAVQGNLLPSASPLPDPGTPLPPDPTAPSP--GTVTP 1209
P P S + SP A ASP P G P PP T PSP G TP
Sbjct: 903 PAPKQAP----ALSMTSSSPKKARATPAPKGIPASPSP-KGAPTPPAATPPSPKGGPATP 957
Query: 1210 VP 1211
P
Sbjct: 958 SP 959
Score = 41.6 bits (96), Expect = 0.005
Identities = 45/173 (26%), Positives = 68/173 (39%), Gaps = 13/173 (7%)
Query: 1050 PFPNQQTP-PSMMPGAVPGSGHPGVAGNAPLGLPFGMPPPPPPPAPSIIPFGSLADSISI 1108
P Q+ P P +P S V A LG P PPP PAP P S A+ S
Sbjct: 10 PATEQELPQPQAETAVLPMSSALSVT--AALGQPGPTLPPPCSPAPQQCPL-SAANQAS- 65
Query: 1109 NLPAPPNLHGHHHHLPF---APGTLPP----PNLPVSMANPLHPNLPATTTMPSSLPLGP 1161
P+P + +PF + GT P P P + N + P + +S + P
Sbjct: 66 PFPSPSTIASTPLEVPFPQSSSGTALPLGTAPEAPTFLPNLIGPPISPAALALASPMIAP 125
Query: 1162 GL-GSAAAQSPAIVAAVQGNLLPSASPLPDPGTPLPPDPTAPSPGTVTPVPPP 1213
L G+ ++ +P + A+ + + +S P PP G+V + P
Sbjct: 126 TLKGTPSSSAPLALVALAPHSVQKSSAFPPNLLTSPPSVAVAESGSVITLSAP 178
Score = 32.0 bits (71), Expect = 3.7
Identities = 63/267 (23%), Positives = 89/267 (33%), Gaps = 21/267 (7%)
Query: 962 PPALPPGSQPIPPTGAAGPPAVHGLAVAPASVVPAPAGSGAPPGSLGPSEQIGQAGSTAG 1021
P AL S I PT P + LA+ + S PP L + A S +
Sbjct: 113 PAALALASPMIAPTLKGTPSSSAPLALVALAPHSVQKSSAFPPNLLTSPPSVAVAESGSV 172
Query: 1022 PQQQQPAGAPQP----GAVPPGVPPPGPHGPSPFPNQQTPP--SMMPGAVPGSGHPGVAG 1075
P +P VP V P PSP T P + P A SG +
Sbjct: 173 ITLSAPIAPSEPKTNLNKVPSEVVPNPKGTPSPPCIVSTVPYHCVTPMASIQSGVASLPQ 232
Query: 1076 NAP-LGLPFGMPPPPPPPAPSIIPFGSLADSISINLPA--PPNLHGHHHHLPF------A 1126
P L P S++ S+S+ P P L LP
Sbjct: 233 TTPTTTLAIASPQVKDTTISSVLISPQNPGSLSLKGPVSPPAALSLSTQSLPVVTSSQKT 292
Query: 1127 PGTLPPPNLPVSMANPLHPNLPATTTMPSSLPLGPGLGSAAAQSPAIVAAVQGNLLPSAS 1186
G PP+ P+S+ + L P + S+ L G +A P V + + + +
Sbjct: 293 AGPNTPPDFPISLGSHL---APLHQSSFGSVQLLGQTGPSALSDPT-VKTISVDHSSTGA 348
Query: 1187 PLPDPGTPLPPDPTAPS--PGTVTPVP 1211
P + +PP P+ P TV P
Sbjct: 349 SYPSQRSVIPPLPSRNEVVPATVAAFP 375
Score = 31.2 bits (69), Expect = 6.3
Identities = 56/256 (21%), Positives = 91/256 (35%), Gaps = 36/256 (14%)
Query: 960 QPPPALPPGSQPIP---PTGAAGPPAVHGLAVAPASVVPAPAGSGAPPGSLGPSEQIGQA 1016
QP P LPP P P P AA + +P+++ P P S G + +G A
Sbjct: 40 QPGPTLPPPCSPAPQQCPLSAANQASPF---PSPSTIASTPLEVPFPQSSSGTALPLGTA 96
Query: 1017 GSTAGPQQQQPAGAPQPGAVPPGVPPPGPHGPSPFPNQQTPPSMMPGAVPGSGHP-GVAG 1075
P +P + PP + P++ P S P +
Sbjct: 97 PEA-------------PTFLPNLIGPPISPAALALASPMIAPTLK--GTPSSSAPLALVA 141
Query: 1076 NAPLGLPFGMPPPP----PPPAPSIIPFGSLADSISINLPAPPNLHGH---HHHLPFAPG 1128
AP + PP PP+ ++ GS+ + P+ P + + +P G
Sbjct: 142 LAPHSVQKSSAFPPNLLTSPPSVAVAESGSVITLSAPIAPSEPKTNLNKVPSEVVPNPKG 201
Query: 1129 TLPPPNLPVSMANPLHPNLPATTTMP--SSLPLGPGLGSAAAQSPAIVAAVQGNLLPSAS 1186
T PP + ++ P H P + +SLP + A SP + ++L S
Sbjct: 202 TPSPPCIVSTV--PYHCVTPMASIQSGVASLPQTTPTTTLAIASPQVKDTTISSVLISPQ 259
Query: 1187 PLPDPGTPLPPDPTAP 1202
+PG+ P +P
Sbjct: 260 ---NPGSLSLKGPVSP 272
>gi|119395760 diaphanous 1 isoform 2 [Homo sapiens]
Length = 1263
Score = 85.5 bits (210), Expect = 3e-16
Identities = 97/352 (27%), Positives = 134/352 (38%), Gaps = 85/352 (24%)
Query: 879 VEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREREALEYQRQQLLADRQAFHMEQ 938
+++ K++ A E + KKL+ +L EL+ M + E + Q L ++ A H E+
Sbjct: 460 IDKTKVEKSEAKAAELE-KKLDSELTARHELQVEMKKMESDFEQKLQDLQGEKDALHSEK 518
Query: 939 LKYA-EMRARQQHFQQMHQQQQQPPPALPPGSQPIPPTGAAG---PPAVHGLA-VAPASV 993
+ A E + + Q+ + + L + + AA PP+V A V PA
Sbjct: 519 QQIATEKQDLEAEVSQLTGEVAKLTKELEDAKKEMASLSAAAITVPPSVPSRAPVPPAPP 578
Query: 994 VPAPAGSGAPPGSLGPSEQIGQAGSTAGPQQQQPAGAPQPG---AVPPGVPPPGPHGPSP 1050
+P +G+ PP P PG PP PPP P P P
Sbjct: 579 LPGDSGTIIPP-------------------------PPAPGDSTTPPPPPPPPPPPPPLP 613
Query: 1051 FPNQQTPPSMMPGAVPGSGHPGVAGNAPLGLPFGMPPPPPP-------PAPSIIPFGSLA 1103
+ P +PG S P ++G+A + PPPPP P+PS +P G+
Sbjct: 614 GGVCISSPPSLPGGTAISPPPPLSGDATI-------PPPPPLPEGVGIPSPSSLPGGTA- 665
Query: 1104 DSISINLPAPPNLHGHHHHLPFAPGTLPPPNLPVSMA-NPLHPNLPATTTMPSSLPLGPG 1162
+P PP L G P PPP LP S P P LP MP P PG
Sbjct: 666 ------IPPPPPLPGSARIPP------PPPPLPGSAGIPPPPPPLPGEAGMPPPPPPLPG 713
Query: 1163 LGSAAAQSPAIVAAVQGNLLPSASPLP-DPGTPLPPDPTAPSPGTVTPVPPP 1213
G +P P P PG P PP PG P PPP
Sbjct: 714 ----------------GPGIPPPPPFPGGPGIPPPP------PGMGMPPPPP 743
Score = 78.6 bits (192), Expect = 3e-14
Identities = 87/306 (28%), Positives = 119/306 (38%), Gaps = 46/306 (15%)
Query: 872 KAKHLAAVEERKIKSLVALLVETQ--MKKLEIKLRHFEELETIMDREREALEYQRQQLLA 929
K++ AA E+K+ S + E Q MKK+E FE+ + E++AL ++QQ+
Sbjct: 467 KSEAKAAELEKKLDSELTARHELQVEMKKME---SDFEQKLQDLQGEKDALHSEKQQIAT 523
Query: 930 DRQAFHMEQLKYA--------EMRARQQHFQQMHQQQQQPPPALPPGSQPIPPT----GA 977
++Q E + E+ ++ + PP++P + P+PP G
Sbjct: 524 EKQDLEAEVSQLTGEVAKLTKELEDAKKEMASLSAAAITVPPSVPSRA-PVPPAPPLPGD 582
Query: 978 AG----PPAVHGLAVAPASVVPAPAGSGAPPGSLGPSEQIGQAGSTA---GPQQQQPAGA 1030
+G PP G + P P P PG + S G TA P A
Sbjct: 583 SGTIIPPPPAPGDSTTPPPPPPPPPPPPPLPGGVCISSPPSLPGGTAISPPPPLSGDATI 642
Query: 1031 PQPGAVPPGVPPPGPHGPSPFPNQQTPPSMMPGAV----PGSGHPGVAGNAPLGLPF--- 1083
P P +P GV P P P PP +PG+ P PG AG P P
Sbjct: 643 PPPPPLPEGVGIPSPSS-LPGGTAIPPPPPLPGSARIPPPPPPLPGSAGIPPPPPPLPGE 701
Query: 1084 -GMPPPPPPPAPSIIPFGSLADSISINLPAPPNLHGHHHHLPFAPGTLPPPNLPVSMANP 1142
GMPPPPPP +P G +P PP G P PG PP P P
Sbjct: 702 AGMPPPPPP-----LPGGP-------GIPPPPPFPGGPGIPPPPPGMGMPPPPPFGFGVP 749
Query: 1143 LHPNLP 1148
P LP
Sbjct: 750 AAPVLP 755
Score = 70.5 bits (171), Expect = 9e-12
Identities = 57/153 (37%), Positives = 64/153 (41%), Gaps = 16/153 (10%)
Query: 961 PPPALPPG----SQPIPPTGAA--GPPAVHGLAVAPASVVPAPAGSGAP-PGSLGPSEQI 1013
PPP LP G S P P G A PP + G A P P P G G P P SL I
Sbjct: 608 PPPPLPGGVCISSPPSLPGGTAISPPPPLSGDATIPPPP-PLPEGVGIPSPSSLPGGTAI 666
Query: 1014 GQAGSTAGPQQQQPAGAPQPGAVPPGVPPPGPHGPSPFPNQQTPPSMM--PGAVPGSGHP 1071
G + P P PG+ G+PPP P P PP + PG P P
Sbjct: 667 PPPPPLPGSARIPPPPPPLPGSA--GIPPPPPPLPGEAGMPPPPPPLPGGPGIPPPPPFP 724
Query: 1072 GVAGNAPLGLPFGMPPPPP----PPAPSIIPFG 1100
G G P GMPPPPP PA ++PFG
Sbjct: 725 GGPGIPPPPPGMGMPPPPPFGFGVPAAPVLPFG 757
>gi|119395758 diaphanous 1 isoform 1 [Homo sapiens]
Length = 1272
Score = 85.5 bits (210), Expect = 3e-16
Identities = 97/352 (27%), Positives = 134/352 (38%), Gaps = 85/352 (24%)
Query: 879 VEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREREALEYQRQQLLADRQAFHMEQ 938
+++ K++ A E + KKL+ +L EL+ M + E + Q L ++ A H E+
Sbjct: 469 IDKTKVEKSEAKAAELE-KKLDSELTARHELQVEMKKMESDFEQKLQDLQGEKDALHSEK 527
Query: 939 LKYA-EMRARQQHFQQMHQQQQQPPPALPPGSQPIPPTGAAG---PPAVHGLA-VAPASV 993
+ A E + + Q+ + + L + + AA PP+V A V PA
Sbjct: 528 QQIATEKQDLEAEVSQLTGEVAKLTKELEDAKKEMASLSAAAITVPPSVPSRAPVPPAPP 587
Query: 994 VPAPAGSGAPPGSLGPSEQIGQAGSTAGPQQQQPAGAPQPG---AVPPGVPPPGPHGPSP 1050
+P +G+ PP P PG PP PPP P P P
Sbjct: 588 LPGDSGTIIPP-------------------------PPAPGDSTTPPPPPPPPPPPPPLP 622
Query: 1051 FPNQQTPPSMMPGAVPGSGHPGVAGNAPLGLPFGMPPPPPP-------PAPSIIPFGSLA 1103
+ P +PG S P ++G+A + PPPPP P+PS +P G+
Sbjct: 623 GGVCISSPPSLPGGTAISPPPPLSGDATI-------PPPPPLPEGVGIPSPSSLPGGTA- 674
Query: 1104 DSISINLPAPPNLHGHHHHLPFAPGTLPPPNLPVSMA-NPLHPNLPATTTMPSSLPLGPG 1162
+P PP L G P PPP LP S P P LP MP P PG
Sbjct: 675 ------IPPPPPLPGSARIPP------PPPPLPGSAGIPPPPPPLPGEAGMPPPPPPLPG 722
Query: 1163 LGSAAAQSPAIVAAVQGNLLPSASPLP-DPGTPLPPDPTAPSPGTVTPVPPP 1213
G +P P P PG P PP PG P PPP
Sbjct: 723 ----------------GPGIPPPPPFPGGPGIPPPP------PGMGMPPPPP 752
Score = 78.6 bits (192), Expect = 3e-14
Identities = 87/306 (28%), Positives = 119/306 (38%), Gaps = 46/306 (15%)
Query: 872 KAKHLAAVEERKIKSLVALLVETQ--MKKLEIKLRHFEELETIMDREREALEYQRQQLLA 929
K++ AA E+K+ S + E Q MKK+E FE+ + E++AL ++QQ+
Sbjct: 476 KSEAKAAELEKKLDSELTARHELQVEMKKME---SDFEQKLQDLQGEKDALHSEKQQIAT 532
Query: 930 DRQAFHMEQLKYA--------EMRARQQHFQQMHQQQQQPPPALPPGSQPIPPT----GA 977
++Q E + E+ ++ + PP++P + P+PP G
Sbjct: 533 EKQDLEAEVSQLTGEVAKLTKELEDAKKEMASLSAAAITVPPSVPSRA-PVPPAPPLPGD 591
Query: 978 AG----PPAVHGLAVAPASVVPAPAGSGAPPGSLGPSEQIGQAGSTA---GPQQQQPAGA 1030
+G PP G + P P P PG + S G TA P A
Sbjct: 592 SGTIIPPPPAPGDSTTPPPPPPPPPPPPPLPGGVCISSPPSLPGGTAISPPPPLSGDATI 651
Query: 1031 PQPGAVPPGVPPPGPHGPSPFPNQQTPPSMMPGAV----PGSGHPGVAGNAPLGLPF--- 1083
P P +P GV P P P PP +PG+ P PG AG P P
Sbjct: 652 PPPPPLPEGVGIPSPSS-LPGGTAIPPPPPLPGSARIPPPPPPLPGSAGIPPPPPPLPGE 710
Query: 1084 -GMPPPPPPPAPSIIPFGSLADSISINLPAPPNLHGHHHHLPFAPGTLPPPNLPVSMANP 1142
GMPPPPPP +P G +P PP G P PG PP P P
Sbjct: 711 AGMPPPPPP-----LPGGP-------GIPPPPPFPGGPGIPPPPPGMGMPPPPPFGFGVP 758
Query: 1143 LHPNLP 1148
P LP
Sbjct: 759 AAPVLP 764
Score = 70.5 bits (171), Expect = 9e-12
Identities = 57/153 (37%), Positives = 64/153 (41%), Gaps = 16/153 (10%)
Query: 961 PPPALPPG----SQPIPPTGAA--GPPAVHGLAVAPASVVPAPAGSGAP-PGSLGPSEQI 1013
PPP LP G S P P G A PP + G A P P P G G P P SL I
Sbjct: 617 PPPPLPGGVCISSPPSLPGGTAISPPPPLSGDATIPPPP-PLPEGVGIPSPSSLPGGTAI 675
Query: 1014 GQAGSTAGPQQQQPAGAPQPGAVPPGVPPPGPHGPSPFPNQQTPPSMM--PGAVPGSGHP 1071
G + P P PG+ G+PPP P P PP + PG P P
Sbjct: 676 PPPPPLPGSARIPPPPPPLPGSA--GIPPPPPPLPGEAGMPPPPPPLPGGPGIPPPPPFP 733
Query: 1072 GVAGNAPLGLPFGMPPPPP----PPAPSIIPFG 1100
G G P GMPPPPP PA ++PFG
Sbjct: 734 GGPGIPPPPPGMGMPPPPPFGFGVPAAPVLPFG 766
>gi|47132519 Ras association and pleckstrin homology domains 1 isoform
1 [Homo sapiens]
Length = 1250
Score = 84.7 bits (208), Expect = 5e-16
Identities = 82/277 (29%), Positives = 102/277 (36%), Gaps = 45/277 (16%)
Query: 956 QQQQQPPPALPPGSQPIPPTGAAGPPAVHGLAVA---PASVVPAPAGSGAPPGSLGPSEQ 1012
Q Q P L P + +PP PP G A+A PA P+ APP L Q
Sbjct: 693 QSQSVKPQILVPPNGVVPPPPPPPPPPTPGSAMAQLKPAPCAPSLPQFSAPPPPL-KIHQ 751
Query: 1013 IGQAGSTAGPQQQQPAGAPQPGAVPPGVPP------PGPHGP---SPFPNQQTPPSMMPG 1063
+ A P P P P +PP PP P P +P Q PP+ P
Sbjct: 752 VQHITQVAPPTPPPPPPIPAP--LPPQAPPKPLVTIPAPTSTKTVAPVVTQAAPPTPTPP 809
Query: 1064 AVPGSGHPGVAGNAPLGLPFGMPPPPPPPAPSIIPFGSLADSISINLPAPPNLHGHHHHL 1123
P P P PP PP P +P +L S PP+
Sbjct: 810 VPPAKKQPA--------FPASYIPPSPPTPPVPVPPPTLPKQQSFCAKPPPS-------- 853
Query: 1124 PFAPGTLPPPNLPVSMANPLHPNLPATTTMPSSLPLGPGLGSAAAQSPAIVAAVQGNLLP 1183
P + P P++ +A+ P P T S PL P + A QSP V A + P
Sbjct: 854 PLS----PVPSVVKQIASQFPP--PPTPPAMESQPLKPVPANVAPQSPPAVKA-KPKWQP 906
Query: 1184 SASPLPDPGTPLPP-------DPTAPSPGTVTPVPPP 1213
S+ P+P P P PP P PSP P PPP
Sbjct: 907 SSIPVPSPDFPPPPPESSLVFPPPPPSPVPAPPPPPP 943
Score = 68.6 bits (166), Expect = 4e-11
Identities = 73/256 (28%), Positives = 89/256 (34%), Gaps = 57/256 (22%)
Query: 997 PAGSGAPPGSLGPSEQIGQAGSTAGPQQQQPAGAPQPGAVPPGVPPPGPHGPSPFPNQQT 1056
P S PP L P +I + + P P P P PP PPP P P P+Q
Sbjct: 601 PYTSLVPP--LSPQPKIVTPYTASQPSPPLPPPPPPPPPPPPPPPPP----PPPLPSQSA 654
Query: 1057 PP-----------SMMPGAVPGSGHPGVAGNAP--------------LGLPFGMPPPPPP 1091
P S + S H G P L P G+ PPPPP
Sbjct: 655 PSAGSAAPMFVKYSTITRLQNASQHSGALFKPPTPPVMQSQSVKPQILVPPNGVVPPPPP 714
Query: 1092 PAPSIIPFGSLAD----SISINLP---APP---NLHGHHHHLPFAPGTLPPPNLPVSMAN 1141
P P P ++A + +LP APP +H H AP T PP P +
Sbjct: 715 PPPPPTPGSAMAQLKPAPCAPSLPQFSAPPPPLKIHQVQHITQVAPPTPPP---PPPIPA 771
Query: 1142 PLHPNLPATTTMPSSLPLGPGLGSAAAQSPAIVAAVQGNLLPSASPLPD----PGTPLPP 1197
PL P P P L P S +P + A P P P + +PP
Sbjct: 772 PLPPQAP-----PKPLVTIPAPTSTKTVAPVVTQAAPPTPTPPVPPAKKQPAFPASYIPP 826
Query: 1198 DPTAPSPGTVTPVPPP 1213
P P PVPPP
Sbjct: 827 SPPTPP----VPVPPP 838
Score = 62.8 bits (151), Expect = 2e-09
Identities = 74/265 (27%), Positives = 95/265 (35%), Gaps = 57/265 (21%)
Query: 959 QQPPPALPPG--SQPIPPTGA----AGPPAVHGLAVAPASVVPAPAGSGAPPGSLGPSEQ 1012
Q PPP PP SQP+ P A PPAV S +P P+ PP
Sbjct: 868 QFPPPPTPPAMESQPLKPVPANVAPQSPPAVKAKPKWQPSSIPVPSPDFPPP-------- 919
Query: 1013 IGQAGSTAGPQQQQPAGAPQPGAVPPGVPPPGPHGPSPFPNQQTPPSMMPGAVPGSGHPG 1072
P + P P + P PPP P SP P++ SG PG
Sbjct: 920 ---------PPESSLVFPPPPPSPVPAPPPPPPPTASPTPDK-------------SGSPG 957
Query: 1073 VAGNAPLGLPFGMPPPPPPPAPSIIPFGSLADSISINLPAPPNLHGHHHHLPFAPG---- 1128
+ P G PPP P S I S A+ P+ +L P G
Sbjct: 958 KK-TSKTSSPGGKKPPPTPQRNSSIKSSSGAEHPEPKRPSVDSLVSKFTP-PAESGSPSK 1015
Query: 1129 -TLPPPNLPVSMANPLHPNLPATTTMPSSLPLGPGLGSAAAQSPAIVAAVQGNLLPSASP 1187
TLPPP P P NL +LP G +A++P + + +++ SP
Sbjct: 1016 ETLPPPAAP---PKPGKLNLSGV-----NLPGVLQQGCVSAKAPVLSGRGKDSVVEFPSP 1067
Query: 1188 LPDPGTPLPPDPTAPSPGTVTPVPP 1212
D P PP P T P+PP
Sbjct: 1068 PSDSDFPPPP------PETELPLPP 1086
Score = 47.0 bits (110), Expect = 1e-04
Identities = 66/270 (24%), Positives = 94/270 (34%), Gaps = 33/270 (12%)
Query: 959 QQPP-----PALPPGSQPIPPTGAAGPPAVHGLAVAPASVVPAPAGSGAPPGSLGPS-EQ 1012
Q PP P P S P+P PP L P P PA PP + P+ ++
Sbjct: 893 QSPPAVKAKPKWQPSSIPVPSPDFPPPPPESSLVFPPPPPSPVPAPPPPPPPTASPTPDK 952
Query: 1013 IGQAG----STAGPQQQQPAGAPQPGA---VPPGVPPPGPHGPS--PFPNQQTPP----- 1058
G G T+ P ++P PQ + G P P PS ++ TPP
Sbjct: 953 SGSPGKKTSKTSSPGGKKPPPTPQRNSSIKSSSGAEHPEPKRPSVDSLVSKFTPPAESGS 1012
Query: 1059 ----SMMPGAVPGSGHPGVAGNAPLGLPFGMPPPPPPPAPSIIPFGSLADSISINLPAPP 1114
++ P A P PG + + LP G+ A + + G DS+ + P+PP
Sbjct: 1013 PSKETLPPPAAPPK--PGKLNLSGVNLP-GVLQQGCVSAKAPVLSGRGKDSV-VEFPSPP 1068
Query: 1115 NLHGHHHHLPFAPGTLPPPNLPVSMANPLHPNLPATTTMPSSLPLGPGLGSAAAQSPAIV 1174
+ P LPP +P + P + P + A P
Sbjct: 1069 SDSDFPPPPPETELPLPPIEIPAVFSGNTSPKVAVVNPQPQQ---WSKMSVKKAPPPTRP 1125
Query: 1175 AAVQGNLLPSA--SPLPDPGTPLPPDPTAP 1202
L A S P T +P PT+P
Sbjct: 1126 KRNDSTRLTQAEISEQPTMATVVPQVPTSP 1155
Score = 46.6 bits (109), Expect = 1e-04
Identities = 50/208 (24%), Positives = 66/208 (31%), Gaps = 55/208 (26%)
Query: 1022 PQQQQPAGAPQPGAVPPGVPPPGPHGPSPFPNQQTPPSMMPGAVPGSGHPGVAGNAPLGL 1081
P+ P A QP P +PPP P P P P PP P +P P AP+ +
Sbjct: 613 PKIVTPYTASQPS---PPLPPPPPPPPPPPP----PPPPPPPPLPSQSAPSAGSAAPMFV 665
Query: 1082 PFG---------------MPPPPPPPAPSIIPFGSLADSISINLPAPPNLHGHHHHLPFA 1126
+ PP PP S S+ + PPN
Sbjct: 666 KYSTITRLQNASQHSGALFKPPTPPVMQS--------QSVKPQILVPPN----------- 706
Query: 1127 PGTLPPPNLPVSMANPLHPNLPATTTMPSSLPLGPGLGSAAAQSPAIVAAVQGNLLPSAS 1186
G +PPP P P P + P P L +A P + ++ A
Sbjct: 707 -GVVPPPPPP-----PPPPTPGSAMAQLKPAPCAPSLPQFSAPPPPLKIHQVQHITQVAP 760
Query: 1187 PLPDPGTPLPPDPTAPSPGTVTPVPPPQ 1214
P P P P P + P PP+
Sbjct: 761 PTPPP--------PPPIPAPLPPQAPPK 780
Score = 32.3 bits (72), Expect = 2.8
Identities = 23/68 (33%), Positives = 26/68 (38%), Gaps = 18/68 (26%)
Query: 1146 NLPATTTMPSSLPLGPGLGSAAAQSPAIVAAVQGNLLPSASPLPDPGTPLPPDPTAPSPG 1205
N P T+ +P PL P P IV P + P P P PP P P P
Sbjct: 599 NRPYTSLVP---PLSP--------QPKIVT-------PYTASQPSPPLPPPPPPPPPPPP 640
Query: 1206 TVTPVPPP 1213
P PPP
Sbjct: 641 PPPPPPPP 648
>gi|42544125 splicing factor 1 isoform 2 [Homo sapiens]
Length = 638
Score = 83.6 bits (205), Expect = 1e-15
Identities = 93/280 (33%), Positives = 109/280 (38%), Gaps = 59/280 (21%)
Query: 961 PPPALPPGSQPIPPTGAAGPPA---VHGLAVAPASVVPAPAGSGAPPGSLGPSEQIGQAG 1017
PPP+L +Q PP +GP HG+ P G G P S G
Sbjct: 354 PPPSLMSTTQSRPPWMNSGPSESRPYHGMHGG------GPGGPGGGPHSFPHPLPSLTGG 407
Query: 1018 STAGPQQQQPAGAPQPGAVPPGVPPPGPHGPSPFPNQQTPPSMMP--GAVP-GSG----- 1069
P Q P G P P PP PPP GP P P PP M G+ P GSG
Sbjct: 408 HGGHPMQHNPNGPPPPWMQPP--PPPMNQGPHP-PGHHGPPPMDQYLGSTPVGSGVYRLH 464
Query: 1070 -HPGVAGNAPLGLPFGMPPPPPPPA--PSIIPFGSLADSISINLPAPPNLHGHHHHLPFA 1126
G+ P+G+ MPPPPPPP+ P P G P PP
Sbjct: 465 QGKGMMPPPPMGM---MPPPPPPPSGQPPPPPSG----------PLPPWQQQQQQP---- 507
Query: 1127 PGTLPPPNLP-VSMAN----PLHPNLPATTTM--PSSLPLGPGLGSAAAQSPAIVAAVQG 1179
PPP P SMA+ P N TTT S+P +AAA SP +QG
Sbjct: 508 ----PPPPPPSSSMASSTPLPWQQNTTTTTTSAGTGSIPPWQQQQAAAAASPG-APQMQG 562
Query: 1180 N-----LLPSASPLPDPGTPLPPDPTAPSPGTVTPVPPPQ 1214
N L P P PG P PP P P PG+ + PP+
Sbjct: 563 NPTMVPLPPGVQPPLPPGAPPPPPP--PPPGSAGMMIPPR 600
Score = 57.8 bits (138), Expect = 6e-08
Identities = 56/180 (31%), Positives = 65/180 (36%), Gaps = 40/180 (22%)
Query: 955 HQQQQQPPPALPPGSQPIPPTGAAGP--PAVHGLAVAPASVVPAPAGSGA---------- 1002
H Q P PP QP PP GP P HG + P GSG
Sbjct: 411 HPMQHNPNGPPPPWMQPPPPPMNQGPHPPGHHGPPPMDQYLGSTPVGSGVYRLHQGKGMM 470
Query: 1003 PPGSLG-----PSEQIGQAGST-AGP------QQQQPAGAPQPGA-VPPGVPPP------ 1043
PP +G P GQ +GP QQQQP P P + + P P
Sbjct: 471 PPPPMGMMPPPPPPPSGQPPPPPSGPLPPWQQQQQQPPPPPPPSSSMASSTPLPWQQNTT 530
Query: 1044 ------GPHGPSPFPNQQTPPSMMPGAVPGSGHPGVAGNAP---LGLPFGMPPPPPPPAP 1094
G P+ QQ + PGA G+P + P LP G PPPPPPP P
Sbjct: 531 TTTTSAGTGSIPPWQQQQAAAAASPGAPQMQGNPTMVPLPPGVQPPLPPGAPPPPPPPPP 590
>gi|5032069 splicing factor 3b, subunit 4 [Homo sapiens]
Length = 424
Score = 82.4 bits (202), Expect = 2e-15
Identities = 71/227 (31%), Positives = 82/227 (36%), Gaps = 42/227 (18%)
Query: 1002 APPGSLGPSEQIGQAGSTAGPQQQQPAGAPQPGAVPPGVPPPGPHGPSPFPNQQTPPSMM 1061
APP P+ + GS P G P PG+ PP VPPPG P P PP M
Sbjct: 214 APPPPSAPNPVVSSLGSGL-----PPPGMPPPGSFPPPVPPPGALPPG-IPPAMPPPPMP 267
Query: 1062 PGA---------VPGSGHPGVAGNAPLGLPFGMPPPPPPPAPSIIPFGSLADSISINLPA 1112
PGA PG+GHPG + P P G P P + G
Sbjct: 268 PGAAGHGPPSAGTPGAGHPGHGHSHPHPFPPGGMPHPGMSQMQLAHHG------------ 315
Query: 1113 PPNLHGHHHHLPFAPGTLPPPNLPVSMANPLHPNLPATTTMPSSLPLGPGLGSAAAQSPA 1172
P+ GH H P G PPP P M HP P P P G +G P
Sbjct: 316 -PHGLGHPHAGPPGSGGQPPPRPPPGMP---HPGPPPMGMPPRGPPFGSPMGHPGPMPPH 371
Query: 1173 IVAAVQGNLLP---SASPLPDP----GTPLPPDPTAPSPGTVTPVPP 1212
+ + P + P P P PLPP P P PVPP
Sbjct: 372 GMRGPPPLMPPHGYTGPPRPPPYGYQRGPLPPPRPTPRP----PVPP 414
Score = 73.6 bits (179), Expect = 1e-12
Identities = 71/211 (33%), Positives = 80/211 (37%), Gaps = 36/211 (17%)
Query: 961 PPPALP-PGS--QPIPPTGAAGPPAVHGLAVAPASVVPAPAGSGAPPGSLGPSEQIGQAG 1017
PPP +P PGS P+PP GA PP + A+ P + P AG G P + G
Sbjct: 233 PPPGMPPPGSFPPPVPPPGAL-PPGIPP-AMPPPPMPPGAAGHGPPSAGTPGAGHPGHGH 290
Query: 1018 STAGPQQQQPAGAPQPGAVPPGVPPPGPHGPSPFPNQQTPPSMMPGAVPGSGHPGVAGNA 1077
S P P G P PG + GPHG P +G PG G
Sbjct: 291 S--HPHPFPPGGMPHPGMSQMQLAHHGPHGLGH---------------PHAGPPGSGGQP 333
Query: 1078 PLGLPFGMPPPPPPP---APSIIPFGSLADSISINLPAPPNLHGHHHHLPFAP--GTLPP 1132
P P GMP P PPP P PFGS + P P HG P P G P
Sbjct: 334 PPRPPPGMPHPGPPPMGMPPRGPPFGS-----PMGHPGPMPPHGMRGPPPLMPPHGYTGP 388
Query: 1133 PNLPV--SMANPLHPNLPATTTMPSSLPLGP 1161
P P PL P P T P P GP
Sbjct: 389 PRPPPYGYQRGPLPP--PRPTPRPPVPPRGP 417
Score = 70.1 bits (170), Expect = 1e-11
Identities = 54/158 (34%), Positives = 63/158 (39%), Gaps = 17/158 (10%)
Query: 961 PPPALPPGSQPIPPTGAAGPPAVHGLAVAPASVVPAPAGSGAPPGSL-------GPS--- 1010
PPP +PPG+ P A P A H + P P G PG GP
Sbjct: 262 PPPPMPPGAAGHGPPSAGTPGAGHP-GHGHSHPHPFPPGGMPHPGMSQMQLAHHGPHGLG 320
Query: 1011 -EQIGQAGSTAGPQQQQPAGAPQPGAVPPGVPPPGPHGPSPF--PNQQTPPSMM--PGAV 1065
G GS P + P G P PG P G+PP GP SP P P M P +
Sbjct: 321 HPHAGPPGSGGQPPPRPPPGMPHPGPPPMGMPPRGPPFGSPMGHPGPMPPHGMRGPPPLM 380
Query: 1066 PGSGHPGVAGNAPLGLPFG-MPPPPPPPAPSIIPFGSL 1102
P G+ G P G G +PPP P P P + P G L
Sbjct: 381 PPHGYTGPPRPPPYGYQRGPLPPPRPTPRPPVPPRGPL 418
Score = 40.8 bits (94), Expect = 0.008
Identities = 35/96 (36%), Positives = 40/96 (41%), Gaps = 9/96 (9%)
Query: 960 QPPPALPPGS-QPIPPTGAA---GPPAVHGLAVAPASVVPAPAGSGAPPGSLGPSEQIGQ 1015
QPPP PPG P PP GPP G + +P P G PP + P G
Sbjct: 332 QPPPRPPPGMPHPGPPPMGMPPRGPP--FGSPMGHPGPMP-PHGMRGPPPLMPPHGYTGP 388
Query: 1016 AGSTAGPQQQQPAGAPQPGAVPPGVPPPGP-HGPSP 1050
Q+ P P+P PP VPP GP GP P
Sbjct: 389 PRPPPYGYQRGPLPPPRPTPRPP-VPPRGPLRGPLP 423
>gi|150170670 piccolo isoform 2 [Homo sapiens]
Length = 4935
Score = 82.4 bits (202), Expect = 2e-15
Identities = 82/265 (30%), Positives = 93/265 (35%), Gaps = 43/265 (16%)
Query: 959 QQP----PPALPPGSQ--PIPPTGAAGPPAVHGLAVAPASVVPAPAGSGAPPG------- 1005
QQP PP PPG+ P P G A PPA + P+S P P PPG
Sbjct: 344 QQPGTVKPPVQPPGTTKPPAQPLGPAKPPAQQTGSEKPSSEQPGPKALAQPPGVGKTPAQ 403
Query: 1006 SLGPSEQIGQAGSTAGPQQQQPAGAPQPGAVP-PGVPPPGPHGPSPFPNQQTPPSMMPGA 1064
GP++ Q T P QQP G P P P P GP P QQ P
Sbjct: 404 QPGPAKPPTQQVGTPKPLAQQP-GLQSPAKAPGPTKTPVQQPGPGKIPAQQAGPGKTSAQ 462
Query: 1065 VPGSGHPGVAGNAPLGLPFGMPPPPPPPAPSIIPFGSLADSISINLPAPPNLHGHHHHLP 1124
G P P LP PPP P P+ PP G
Sbjct: 463 QTGPTKP------PSQLPGPAKPPPQQPGPA---------------KPPPQQPGSAKPPS 501
Query: 1125 FAPGTLPPPNLPVSMANPLHPNLPATTTMPSSLPLGPGLGSAAAQSPAIVAAVQGNLLPS 1184
PG+ PP A P P P +T PS P G SA SPA +A Q S
Sbjct: 502 QQPGSTKPPPQQPGPAKP-SPQQPGSTKPPSQQP-GSAKPSAQQPSPAKPSAQQ-----S 554
Query: 1185 ASPLPDPGTPLPPDPTAPSPGTVTP 1209
P+ G+ P P SP P
Sbjct: 555 TKPVSQTGSGKPLQPPTVSPSAKQP 579
Score = 67.4 bits (163), Expect = 8e-11
Identities = 89/298 (29%), Positives = 107/298 (35%), Gaps = 52/298 (17%)
Query: 952 QQMHQQQQQPPPALPP--GSQPIPPTGAAGPPA--------------VHGLAVAPASVVP 995
QQ + + QPP P G P T A P V G +V P+ P
Sbjct: 242 QQPEKIKSQPPGTGKPIQGPTQTPQTDHAKLPLQRDASRPQTKQADIVRGESVKPSLPSP 301
Query: 996 APAGSGAPPGSLGPSEQIGQAGSTAGPQQQ--QPAG-----APQPGAVPPGVPPPG---- 1044
+ P P++Q G S GP + QP+G A QPG V P V PPG
Sbjct: 302 SKPPIQQPTPGKPPAQQPGHEKSQPGPAKPPAQPSGLTKPLAQQPGTVKPPVQPPGTTKP 361
Query: 1045 ---PHGPSPFPNQQT----PPSMMPGAVPGSGHPGVAGNAPLGLPFGMPPPPPPPAPSII 1097
P GP+ P QQT P S PG + PGV P P P PP +
Sbjct: 362 PAQPLGPAKPPAQQTGSEKPSSEQPGPKALAQPPGVGKT-----PAQQPGPAKPPTQQVG 416
Query: 1098 PFGSLADSISINLPAPPNLHGHHHHLPFAPGTLPPPNLPVSMANPLHPNLPAT--TTMPS 1155
LA + PA G PG P +P A P + T T PS
Sbjct: 417 TPKPLAQQPGLQSPA--KAPGPTKTPVQQPG---PGKIPAQQAGPGKTSAQQTGPTKPPS 471
Query: 1156 SLPLGPGLGSAAAQSPAIVAAVQ-GNLLPSASPLPDPGTPLPPDPTAPSPGTVTPVPP 1212
LP GP PA Q G+ P P PG+ PP P P P +P P
Sbjct: 472 QLP-GPAKPPPQQPGPAKPPPQQPGSAKP---PSQQPGSTKPP-PQQPGPAKPSPQQP 524
Score = 58.2 bits (139), Expect = 5e-08
Identities = 70/238 (29%), Positives = 91/238 (38%), Gaps = 62/238 (26%)
Query: 990 PASVVPAPAGSGAPPGSLGPSEQIGQAGSTAGPQQQQPAGAPQPGAVPPGVPPPGPHGPS 1049
PAS +P SG+P S P++ S++ QP P P PP PPP P P
Sbjct: 2372 PASQLP----SGSPSVSSLPAKPRPFFRSSSLDISAQPPPPPPPPPPPP--PPPPPPPPP 2425
Query: 1050 PFPNQQTP-PSMMPGAVPGSGHPGVAGNAPL----------------GLPF----GMPPP 1088
P P +P P+++P P V PL GLP PP
Sbjct: 2426 PLPPPTSPKPTILPKKKLTVASP-VTTATPLFDAVTTLETTAVLRSNGLPVTRICTTAPP 2484
Query: 1089 PPPPAPSIIPFGSLADSISINLPAPPNLHGHHHHLPFAPGTLPPPNLPVSMANPLHPNLP 1148
P PP PS IP G L F P P+ P P+ P LP
Sbjct: 2485 PVPPKPSSIPSG----------------------LVFT--HRPEPSKPPIAPKPVIPQLP 2520
Query: 1149 ATTTMPSSL-PLGPGLGSAAAQSPAIVAAVQGNLLPSAS-PLPDPGTPLPPDPTAPSP 1204
TT P+ + P GL ++ +++ NL+ SA LP P +PL P SP
Sbjct: 2521 TTTQKPTDIHPKPTGL--------SLTSSMTLNLVTSADYKLPSPTSPLSPHSNKSSP 2570
Score = 46.6 bits (109), Expect = 1e-04
Identities = 45/146 (30%), Positives = 51/146 (34%), Gaps = 11/146 (7%)
Query: 959 QQPPPALPPGSQPIPPTGAA---GPPAVHGLAVAPASVVPAPAGSGAPP----GSLGPSE 1011
QQP P P Q P +A GP PA P G PP GS P
Sbjct: 442 QQPGPGKIPAQQAGPGKTSAQQTGPTKPPSQLPGPAKPPPQQPGPAKPPPQQPGSAKPPS 501
Query: 1012 QIGQAGSTAGPQQQQPAGAPQPGAVPPGVPPPGPHGPSPFPNQQTPPSMMPGAVPGSGHP 1071
Q Q GST P QQP A P PP S P+ Q P P A +
Sbjct: 502 Q--QPGSTK-PPPQQPGPAKPSPQQPGSTKPPSQQPGSAKPSAQQPSPAKPSAQQSTKPV 558
Query: 1072 GVAGNA-PLGLPFGMPPPPPPPAPSI 1096
G+ PL P P PP+ +
Sbjct: 559 SQTGSGKPLQPPTVSPSAKQPPSQGL 584
Score = 43.1 bits (100), Expect = 0.002
Identities = 54/230 (23%), Positives = 79/230 (34%), Gaps = 20/230 (8%)
Query: 953 QMHQQQQQPPPALPPGSQP---IPPTGAAGPPAVHGLAVAPASVVPAPAGSGAPPGSLGP 1009
Q +++ PP ++P PPTG P + +P PA GP
Sbjct: 784 QSQAEEKTTPPLKTDSAKPSQSFPPTGEKVSPF-------DSKAIPRPASDSKIISHPGP 836
Query: 1010 S------EQIGQAGSTAGPQQQQPAGAPQPGAVPPGVPPPGPHGPSPFPNQQTP-PSMMP 1062
S +Q+ P++ Q +P+P A P P P GP P Q P P P
Sbjct: 837 SSESKGQKQVDPVQKKEEPKKAQTKMSPKPDAKPMPKGSPTPPGPRPTAGQTVPTPQQSP 896
Query: 1063 GAVPGSGHPGVAGNAPLGLPFGMPPPPPPPAP-SIIPFGSLADSISINLPAPPNLHGHHH 1121
S + + P P P + FG+ S + NL + G H
Sbjct: 897 KPQEQSRRFSLNLGSITDAPKSQPTTPQETVTGKLFGFGASIFSQASNLISTAGQPGPHS 956
Query: 1122 HL-PFAP-GTLPPPNLPVSMANPLHPNLPATTTMPSSLPLGPGLGSAAAQ 1169
P AP P P+ P + P A S+P+ + AA+
Sbjct: 957 QSGPGAPMKQAPAPSQPPTSQGPPKSTGQAPPAPAKSIPVKKETKAPAAE 1006
Score = 33.9 bits (76), Expect = 0.97
Identities = 23/87 (26%), Positives = 38/87 (43%), Gaps = 12/87 (13%)
Query: 960 QPPPALPPGSQPIP-PTGAAGPPAVHGLAVAPASVVPAPAGSGAPPGSLGPSEQIGQAGS 1018
+PPP P ++P P G+ PP+ + P++ P+P A P + ++ + Q GS
Sbjct: 508 KPPPQQPGPAKPSPQQPGSTKPPSQQPGSAKPSAQQPSP----AKPSAQQSTKPVSQTGS 563
Query: 1019 -------TAGPQQQQPAGAPQPGAVPP 1038
T P +QP P + P
Sbjct: 564 GKPLQPPTVSPSAKQPPSQGLPKTICP 590
Score = 32.7 bits (73), Expect = 2.2
Identities = 23/60 (38%), Positives = 28/60 (46%), Gaps = 4/60 (6%)
Query: 1155 SSLPLG-PGLGSAAAQSPAIVAAVQGNLLPSASPLPDPGTPLPPDPTAPSPGTVTPVPPP 1213
S LP G P + S A+ + +L SA P P P P PP P P P P+PPP
Sbjct: 2374 SQLPSGSPSVSSLPAKPRPFFRS--SSLDISAQPPPPPPPP-PPPPPPPPPPPPPPLPPP 2430
Score = 32.3 bits (72), Expect = 2.8
Identities = 35/163 (21%), Positives = 63/163 (38%), Gaps = 22/163 (13%)
Query: 686 PRVASAAAKSALEEFSKMKEEVPTALVEAHVRKVEEAAKVTGKADPAFGLESSGIAG--- 742
P S E+ + E + + E +++ +E K T K D + SS
Sbjct: 1438 PHEVSPEQPKDQEKTQSLSETLEITISEEEIKESQEERKDTFKKDSQQDIPSSKDHKEKS 1497
Query: 743 ------TTSDEP-ERIEESGNDE----------ARVEGQATDEKKEPKEPREGGGAIEEE 785
TT EP + +EES E V ++DE K+ E +G G E+
Sbjct: 1498 EFVDDITTRREPYDSVEESSESENSPVPQRKRRTSVGSSSSDEYKQ--EDSQGSGEEEDF 1555
Query: 786 AKEKTSEAPKKDEEKGKEGDSEKESEKSDGDPIVDPEKEKEPK 828
+++ E ++ G E D ++ + + +K++E K
Sbjct: 1556 IRKQIIEMSADEDASGSEDDEFIRNQLKEISSSTESQKKEETK 1598
>gi|150378539 piccolo isoform 1 [Homo sapiens]
Length = 5142
Score = 82.4 bits (202), Expect = 2e-15
Identities = 82/265 (30%), Positives = 93/265 (35%), Gaps = 43/265 (16%)
Query: 959 QQP----PPALPPGSQ--PIPPTGAAGPPAVHGLAVAPASVVPAPAGSGAPPG------- 1005
QQP PP PPG+ P P G A PPA + P+S P P PPG
Sbjct: 344 QQPGTVKPPVQPPGTTKPPAQPLGPAKPPAQQTGSEKPSSEQPGPKALAQPPGVGKTPAQ 403
Query: 1006 SLGPSEQIGQAGSTAGPQQQQPAGAPQPGAVP-PGVPPPGPHGPSPFPNQQTPPSMMPGA 1064
GP++ Q T P QQP G P P P P GP P QQ P
Sbjct: 404 QPGPAKPPTQQVGTPKPLAQQP-GLQSPAKAPGPTKTPVQQPGPGKIPAQQAGPGKTSAQ 462
Query: 1065 VPGSGHPGVAGNAPLGLPFGMPPPPPPPAPSIIPFGSLADSISINLPAPPNLHGHHHHLP 1124
G P P LP PPP P P+ PP G
Sbjct: 463 QTGPTKP------PSQLPGPAKPPPQQPGPA---------------KPPPQQPGSAKPPS 501
Query: 1125 FAPGTLPPPNLPVSMANPLHPNLPATTTMPSSLPLGPGLGSAAAQSPAIVAAVQGNLLPS 1184
PG+ PP A P P P +T PS P G SA SPA +A Q S
Sbjct: 502 QQPGSTKPPPQQPGPAKP-SPQQPGSTKPPSQQP-GSAKPSAQQPSPAKPSAQQ-----S 554
Query: 1185 ASPLPDPGTPLPPDPTAPSPGTVTP 1209
P+ G+ P P SP P
Sbjct: 555 TKPVSQTGSGKPLQPPTVSPSAKQP 579
Score = 67.4 bits (163), Expect = 8e-11
Identities = 89/298 (29%), Positives = 107/298 (35%), Gaps = 52/298 (17%)
Query: 952 QQMHQQQQQPPPALPP--GSQPIPPTGAAGPPA--------------VHGLAVAPASVVP 995
QQ + + QPP P G P T A P V G +V P+ P
Sbjct: 242 QQPEKIKSQPPGTGKPIQGPTQTPQTDHAKLPLQRDASRPQTKQADIVRGESVKPSLPSP 301
Query: 996 APAGSGAPPGSLGPSEQIGQAGSTAGPQQQ--QPAG-----APQPGAVPPGVPPPG---- 1044
+ P P++Q G S GP + QP+G A QPG V P V PPG
Sbjct: 302 SKPPIQQPTPGKPPAQQPGHEKSQPGPAKPPAQPSGLTKPLAQQPGTVKPPVQPPGTTKP 361
Query: 1045 ---PHGPSPFPNQQT----PPSMMPGAVPGSGHPGVAGNAPLGLPFGMPPPPPPPAPSII 1097
P GP+ P QQT P S PG + PGV P P P PP +
Sbjct: 362 PAQPLGPAKPPAQQTGSEKPSSEQPGPKALAQPPGVGKT-----PAQQPGPAKPPTQQVG 416
Query: 1098 PFGSLADSISINLPAPPNLHGHHHHLPFAPGTLPPPNLPVSMANPLHPNLPAT--TTMPS 1155
LA + PA G PG P +P A P + T T PS
Sbjct: 417 TPKPLAQQPGLQSPA--KAPGPTKTPVQQPG---PGKIPAQQAGPGKTSAQQTGPTKPPS 471
Query: 1156 SLPLGPGLGSAAAQSPAIVAAVQ-GNLLPSASPLPDPGTPLPPDPTAPSPGTVTPVPP 1212
LP GP PA Q G+ P P PG+ PP P P P +P P
Sbjct: 472 QLP-GPAKPPPQQPGPAKPPPQQPGSAKP---PSQQPGSTKPP-PQQPGPAKPSPQQP 524
Score = 58.2 bits (139), Expect = 5e-08
Identities = 70/238 (29%), Positives = 91/238 (38%), Gaps = 62/238 (26%)
Query: 990 PASVVPAPAGSGAPPGSLGPSEQIGQAGSTAGPQQQQPAGAPQPGAVPPGVPPPGPHGPS 1049
PAS +P SG+P S P++ S++ QP P P PP PPP P P
Sbjct: 2372 PASQLP----SGSPSVSSLPAKPRPFFRSSSLDISAQPPPPPPPPPPPP--PPPPPPPPP 2425
Query: 1050 PFPNQQTP-PSMMPGAVPGSGHPGVAGNAPL----------------GLPF----GMPPP 1088
P P +P P+++P P V PL GLP PP
Sbjct: 2426 PLPPPTSPKPTILPKKKLTVASP-VTTATPLFDAVTTLETTAVLRSNGLPVTRICTTAPP 2484
Query: 1089 PPPPAPSIIPFGSLADSISINLPAPPNLHGHHHHLPFAPGTLPPPNLPVSMANPLHPNLP 1148
P PP PS IP G L F P P+ P P+ P LP
Sbjct: 2485 PVPPKPSSIPSG----------------------LVFT--HRPEPSKPPIAPKPVIPQLP 2520
Query: 1149 ATTTMPSSL-PLGPGLGSAAAQSPAIVAAVQGNLLPSAS-PLPDPGTPLPPDPTAPSP 1204
TT P+ + P GL ++ +++ NL+ SA LP P +PL P SP
Sbjct: 2521 TTTQKPTDIHPKPTGL--------SLTSSMTLNLVTSADYKLPSPTSPLSPHSNKSSP 2570
Score = 46.6 bits (109), Expect = 1e-04
Identities = 45/146 (30%), Positives = 51/146 (34%), Gaps = 11/146 (7%)
Query: 959 QQPPPALPPGSQPIPPTGAA---GPPAVHGLAVAPASVVPAPAGSGAPP----GSLGPSE 1011
QQP P P Q P +A GP PA P G PP GS P
Sbjct: 442 QQPGPGKIPAQQAGPGKTSAQQTGPTKPPSQLPGPAKPPPQQPGPAKPPPQQPGSAKPPS 501
Query: 1012 QIGQAGSTAGPQQQQPAGAPQPGAVPPGVPPPGPHGPSPFPNQQTPPSMMPGAVPGSGHP 1071
Q Q GST P QQP A P PP S P+ Q P P A +
Sbjct: 502 Q--QPGSTK-PPPQQPGPAKPSPQQPGSTKPPSQQPGSAKPSAQQPSPAKPSAQQSTKPV 558
Query: 1072 GVAGNA-PLGLPFGMPPPPPPPAPSI 1096
G+ PL P P PP+ +
Sbjct: 559 SQTGSGKPLQPPTVSPSAKQPPSQGL 584
Score = 43.1 bits (100), Expect = 0.002
Identities = 54/230 (23%), Positives = 79/230 (34%), Gaps = 20/230 (8%)
Query: 953 QMHQQQQQPPPALPPGSQP---IPPTGAAGPPAVHGLAVAPASVVPAPAGSGAPPGSLGP 1009
Q +++ PP ++P PPTG P + +P PA GP
Sbjct: 784 QSQAEEKTTPPLKTDSAKPSQSFPPTGEKVSPF-------DSKAIPRPASDSKIISHPGP 836
Query: 1010 S------EQIGQAGSTAGPQQQQPAGAPQPGAVPPGVPPPGPHGPSPFPNQQTP-PSMMP 1062
S +Q+ P++ Q +P+P A P P P GP P Q P P P
Sbjct: 837 SSESKGQKQVDPVQKKEEPKKAQTKMSPKPDAKPMPKGSPTPPGPRPTAGQTVPTPQQSP 896
Query: 1063 GAVPGSGHPGVAGNAPLGLPFGMPPPPPPPAP-SIIPFGSLADSISINLPAPPNLHGHHH 1121
S + + P P P + FG+ S + NL + G H
Sbjct: 897 KPQEQSRRFSLNLGSITDAPKSQPTTPQETVTGKLFGFGASIFSQASNLISTAGQPGPHS 956
Query: 1122 HL-PFAP-GTLPPPNLPVSMANPLHPNLPATTTMPSSLPLGPGLGSAAAQ 1169
P AP P P+ P + P A S+P+ + AA+
Sbjct: 957 QSGPGAPMKQAPAPSQPPTSQGPPKSTGQAPPAPAKSIPVKKETKAPAAE 1006
Score = 33.9 bits (76), Expect = 0.97
Identities = 23/87 (26%), Positives = 38/87 (43%), Gaps = 12/87 (13%)
Query: 960 QPPPALPPGSQPIP-PTGAAGPPAVHGLAVAPASVVPAPAGSGAPPGSLGPSEQIGQAGS 1018
+PPP P ++P P G+ PP+ + P++ P+P A P + ++ + Q GS
Sbjct: 508 KPPPQQPGPAKPSPQQPGSTKPPSQQPGSAKPSAQQPSP----AKPSAQQSTKPVSQTGS 563
Query: 1019 -------TAGPQQQQPAGAPQPGAVPP 1038
T P +QP P + P
Sbjct: 564 GKPLQPPTVSPSAKQPPSQGLPKTICP 590
Score = 32.7 bits (73), Expect = 2.2
Identities = 23/60 (38%), Positives = 28/60 (46%), Gaps = 4/60 (6%)
Query: 1155 SSLPLG-PGLGSAAAQSPAIVAAVQGNLLPSASPLPDPGTPLPPDPTAPSPGTVTPVPPP 1213
S LP G P + S A+ + +L SA P P P P PP P P P P+PPP
Sbjct: 2374 SQLPSGSPSVSSLPAKPRPFFRS--SSLDISAQPPPPPPPP-PPPPPPPPPPPPPPLPPP 2430
Score = 32.3 bits (72), Expect = 2.8
Identities = 35/163 (21%), Positives = 63/163 (38%), Gaps = 22/163 (13%)
Query: 686 PRVASAAAKSALEEFSKMKEEVPTALVEAHVRKVEEAAKVTGKADPAFGLESSGIAG--- 742
P S E+ + E + + E +++ +E K T K D + SS
Sbjct: 1438 PHEVSPEQPKDQEKTQSLSETLEITISEEEIKESQEERKDTFKKDSQQDIPSSKDHKEKS 1497
Query: 743 ------TTSDEP-ERIEESGNDE----------ARVEGQATDEKKEPKEPREGGGAIEEE 785
TT EP + +EES E V ++DE K+ E +G G E+
Sbjct: 1498 EFVDDITTRREPYDSVEESSESENSPVPQRKRRTSVGSSSSDEYKQ--EDSQGSGEEEDF 1555
Query: 786 AKEKTSEAPKKDEEKGKEGDSEKESEKSDGDPIVDPEKEKEPK 828
+++ E ++ G E D ++ + + +K++E K
Sbjct: 1556 IRKQIIEMSADEDASGSEDDEFIRNQLKEISSSTESQKKEETK 1598
>gi|7706501 WW domain binding protein 11 [Homo sapiens]
Length = 641
Score = 82.0 bits (201), Expect = 3e-15
Identities = 95/351 (27%), Positives = 139/351 (39%), Gaps = 73/351 (20%)
Query: 799 EKGKEGDSEKESEKSDGDPIVDPEKEKEPKEGQEEVLKEVVESEGERKTKVERDIGEGNL 858
++G + D SE DG P + + + + K ES+G+ V RD GE +
Sbjct: 242 QRGHDDDVSSTSE-DDGYPEDMDQDKHDDSTDDSDTDKSDGESDGDEF--VHRDNGERDN 298
Query: 859 STAAAAALAAAAVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDRERE 918
+ + L+ V+ + +K K++ L T ++ + +++ E I + RE
Sbjct: 299 NEEKKSGLS---VRFADMPGKSRKKKKNMKEL---TPLQAMMLRMAGQE----IPEEGRE 348
Query: 919 ALEYQRQQLLADRQAFHMEQLKYAEMRARQQHFQQMHQ--------QQQQPPPALPPGSQ 970
E+ D AE ++++QH ++ H QQQ PP ++PP
Sbjct: 349 VEEFSEDDDEDDSDDSE------AEKQSQKQHKEESHSDGTSTASSQQQAPPQSVPPSQI 402
Query: 971 PIPPTGAAGPPAVHGLAVAPASVVPAPAGSGAPPGSLGPSEQIGQAGSTAGPQQQQPAG- 1029
PP GPP + G AP P P +G PPG P +P G
Sbjct: 403 QAPPM--PGPPPL-GPPPAPPLRPPGPP-TGLPPGP-----------PPGAPPFLRPPGM 447
Query: 1030 ----APQPGAVPPGVPPPGPHGPSPFPNQQTPPSMMPGAVPGSGHPGVAGNAPLGLPFGM 1085
P P +PPG PP P GP P P PP + PG P P + AP G+P
Sbjct: 448 PGLRGPLPRLLPPGPPPGRPPGPPPGP----PPGLPPGPPPRGPPPRLPPPAPPGIP--- 500
Query: 1086 PPPPPPPAPSII-PFGSLADSISINLPAPPNLHGHHHHLPFAPGTLPPPNL 1135
PP P P ++ P G PAPP L F P LP P +
Sbjct: 501 PPRPGMMRPPLVPPLG----------PAPPGL--------FPPAPLPNPGV 533
Score = 58.5 bits (140), Expect = 4e-08
Identities = 72/299 (24%), Positives = 114/299 (38%), Gaps = 52/299 (17%)
Query: 797 DEEKGKEGDSEKESEKSDGDPIVDPEKEKEPKEGQEEVLKEVVESEGERKTKVERDIGEG 856
D++K + + +++KSDG+ +G E V ++ GER E+ G
Sbjct: 263 DQDKHDDSTDDSDTDKSDGE-----------SDGDEFVHRD----NGERDNNEEKKSG-- 305
Query: 857 NLSTAAAAALAAAAVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDRE 916
LS A + K K++ +++ L A+++ +++ + R EE D +
Sbjct: 306 -LSVRFADMPGKSRKKKKNM-----KELTPLQAMMLRMAGQEIPEEGREVEEFSEDDDED 359
Query: 917 -REALEYQRQQLLADRQAFHMEQLKYAEMRARQQHFQQMHQQQQQPP---------PALP 966
+ E ++Q ++ H + A + + Q Q PP P P
Sbjct: 360 DSDDSEAEKQSQKQHKEESHSDGTSTASSQQQAPPQSVPPSQIQAPPMPGPPPLGPPPAP 419
Query: 967 PGSQPIPPTGAAG-----------PPAVHGLAVAPASVVPAPAGSGAPPGSL-GPSEQIG 1014
P P PPTG PP + GL ++P G PPG GP +
Sbjct: 420 PLRPPGPPTGLPPGPPPGAPPFLRPPGMPGLRGPLPRLLPPGPPPGRPPGPPPGPPPGLP 479
Query: 1015 QAGSTAGPQQQQPAGAP------QPGAV-PPGVPPPGPHGPSPFPNQQTPPSMMPGAVP 1066
GP + P AP +PG + PP VPP GP P FP P + A P
Sbjct: 480 PGPPPRGPPPRLPPPAPPGIPPPRPGMMRPPLVPPLGPAPPGLFPPAPLPNPGVLSAPP 538
Score = 49.7 bits (117), Expect = 2e-05
Identities = 49/159 (30%), Positives = 55/159 (34%), Gaps = 51/159 (32%)
Query: 1054 QQTPPSMMPGAVPGSGHPGVAGNAPLGLPFGMPPPPPPPAPSIIPFGSLADSISINLPAP 1113
QQ PP +P + + P + G PLG PPP PP P P G P P
Sbjct: 390 QQAPPQSVPPSQIQA--PPMPGPPPLG-----PPPAPPLRPPGPPTGLP--------PGP 434
Query: 1114 PNLHGHHHHLPFAPGTLPPPNLPVSMANPLHPNLPATTTMPSSLPLGPGLGSAAAQSPAI 1173
P P AP L PP +P + PL P LP GP G
Sbjct: 435 P---------PGAPPFLRPPGMP-GLRGPL----------PRLLPPGPPPGRP------- 467
Query: 1174 VAAVQGNLLPSASPLPDPGTPLPPDPTAPSPGTVTPVPP 1212
P P P PG P P P P P P PP
Sbjct: 468 ---------PGPPPGPPPGLPPGPPPRGPPPRLPPPAPP 497
Score = 41.2 bits (95), Expect = 0.006
Identities = 32/92 (34%), Positives = 38/92 (41%), Gaps = 8/92 (8%)
Query: 1126 APGTLPPPNLPVSMANPLHPNLPATTTMPSSLPLGPGLGSAAAQSPAIVAAVQGNLLPSA 1185
AP PP L A PL P P P+ LP GP G+ P + ++G L
Sbjct: 404 APPMPGPPPLGPPPAPPLRPPGP-----PTGLPPGPPPGAPPFLRPPGMPGLRGPLPRLL 458
Query: 1186 SPLPDPGTPLPPDPTAPS---PGTVTPVPPPQ 1214
P P PG P P P P PG PPP+
Sbjct: 459 PPGPPPGRPPGPPPGPPPGLPPGPPPRGPPPR 490
Score = 32.3 bits (72), Expect = 2.8
Identities = 23/74 (31%), Positives = 31/74 (41%), Gaps = 5/74 (6%)
Query: 1040 VPPPGPHGPSPFPNQQT--PPSMMPGAVPGSGHPGVAGNAPLGLPFGMPPPPPPPAPSII 1097
+P PG PS PP+ +P GH GV P P G PPP PP P ++
Sbjct: 156 IPLPGAQPPSILKKTSAYGPPTRAVSILPLLGH-GVPRLPPGRKPPG--PPPGPPPPQVV 212
Query: 1098 PFGSLADSISINLP 1111
+++LP
Sbjct: 213 QMYGRKVGFALDLP 226
Score = 31.6 bits (70), Expect = 4.8
Identities = 37/162 (22%), Positives = 59/162 (36%), Gaps = 29/162 (17%)
Query: 891 LVETQMKKLEIKLRH-FEELETIMDREREALEYQRQQLLADRQAFHMEQLKYAEMRAR-Q 948
L E +K KLR FE + + ++E + + ++L +++Y + RA+
Sbjct: 73 LNEKVLKDKRKKLRETFERILRLYEKENPDIYKELRKL----------EVEYEQKRAQLS 122
Query: 949 QHFQQMHQQQQQPPPALPPGSQPIPPTGAAGPPAVHGLAVAPASVVPAPAGSGAPPGSLG 1008
Q+F + Q ++P P P+ + P PP L
Sbjct: 123 QYFDAVKNAQHVEVESIPLPDMPHAPSNIL--------------IQDIPLPGAQPPSILK 168
Query: 1009 PSEQIGQAGSTAGPQQQQPAGAPQ--PGAVPPGVPPPGPHGP 1048
+ G G P+ PG PPG PPPGP P
Sbjct: 169 KTSAYGPPTRAVSILPLLGHGVPRLPPGRKPPG-PPPGPPPP 209
Score = 30.8 bits (68), Expect = 8.2
Identities = 25/68 (36%), Positives = 27/68 (39%), Gaps = 18/68 (26%)
Query: 1042 PPGPHGPSPFPNQQTPPSMMPGAVPGS--------GHPGVA-------GNAPLGLPFGMP 1086
P PH PS Q P +PGA P S G P A G+ LP G
Sbjct: 142 PDMPHAPSNILIQDIP---LPGAQPPSILKKTSAYGPPTRAVSILPLLGHGVPRLPPGRK 198
Query: 1087 PPPPPPAP 1094
PP PPP P
Sbjct: 199 PPGPPPGP 206
>gi|112382226 atrophin-1 like protein isoform b [Homo sapiens]
Length = 1012
Score = 81.6 bits (200), Expect = 4e-15
Identities = 125/530 (23%), Positives = 175/530 (33%), Gaps = 81/530 (15%)
Query: 737 SSGIAGTTSDEPERIEESGNDEARVEGQATDEKKEPKEPREGGGAIEEEAKEKTSEAPKK 796
+S A +TS + E +V+ +A+ K K RE + EEA +S+ K
Sbjct: 58 NSPSAASTSSNDSKAETVKKSAKKVKEEASSPLKSNKRQREKVASDTEEADRTSSKKTKT 117
Query: 797 DEEKGKEGDSEKESEKSDGDPIVDPEKEKEPKEGQEEVLKEVVESEGERKTKVERDIGEG 856
E SE E E SD V EG K DI +
Sbjct: 118 QEISRPNSPSEGEGESSDS---------------------RSVNDEGSSDPK---DIDQD 153
Query: 857 NLSTAAAAALAAAAVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDRE 916
N ST+ + +A ++ AL T +
Sbjct: 154 NRSTSPSIPSPQDNESDSDSSAQQQMLQAQPPALQAPTGVTPAPSSAPPGTPQLPTPGPT 213
Query: 917 REALEYQRQQLLADRQAFHMEQLKYAEMRARQQHFQQMH--QQQQQPPPALPPGSQPIPP 974
A Q QA + Q A + H QQ Q+ P P PP P PP
Sbjct: 214 PSATAVPPQGSPTASQAPNQPQAPTAPVP--HTHIQQAPALHPQRPPSPHPPPHPSPHPP 271
Query: 975 ----TGAAG----------------PPAVHGLAVAPASVVPAPAGS-GAPPGSLGPSEQI 1013
TG+AG PP H L P P P G PP + +
Sbjct: 272 LQPLTGSAGQPSAPSHAQPPLHGQGPPGPHSLQAGPLLQHPGPPQPFGLPPQASQGQAPL 331
Query: 1014 GQAGSTAGPQQ--QQPAGAPQPGAVPPGVPPPGPHGPSPFPNQQTPPS----MMPGAVPG 1067
G + + A P Q PA + P P P P P+ + PP+ +P
Sbjct: 332 GTSPAAAYPHTSLQLPASQSALQSQQPPREQPLPPAPLAMPHIKPPPTTPIPQLPAPQAH 391
Query: 1068 SGHPGVAGNAPLGLPFGMPPPPP-----------PPAPSIIPFGSLADSISI-NLPAPPN 1115
P ++G +P + +PPPP PP+ P + S + + PA P
Sbjct: 392 KHPPHLSGPSPFSMNANLPPPPALKPLSSLSTHHPPSAHPPPLQLMPQSQPLPSSPAQPP 451
Query: 1116 LHGHHHHLPFAPGTLPPPNL------PVSMANPLHPNLPATTTMP-----SSLPLGPGLG 1164
+LP P + PP L P +P P P T P S+ P GPG
Sbjct: 452 GLTQSQNLPPPPASHPPTGLHQVAPQPPFAQHPFVPGGPPPITPPTCPSTSTPPAGPG-- 509
Query: 1165 SAAAQSPAIVAAVQGNLLPSASPLPDPGTPLPPDPTAPSPGTVTPVPPPQ 1214
+AQ P AA G + S P P + + + +P PPP+
Sbjct: 510 -TSAQPPCSGAAASGGSIAGGSSCPLPTVQIKEEALDDAEEPESPPPPPR 558
Score = 45.4 bits (106), Expect = 3e-04
Identities = 53/190 (27%), Positives = 66/190 (34%), Gaps = 43/190 (22%)
Query: 943 EMRARQQHFQQMHQQQQQP-------PPALPPGSQPIPPTGAAGPPAVHG--LAVAPASV 993
++ A Q H H P PP PP +P+ PP+ H L + P S
Sbjct: 384 QLPAPQAHKHPPHLSGPSPFSMNANLPP--PPALKPLSSLSTHHPPSAHPPPLQLMPQSQ 441
Query: 994 VPAPAGSGAPPGSLGPSEQIGQAGSTAGPQQQQPAGAPQPGAVPPGVPPPG-PHGPSPFP 1052
P P+ PPG L S+ + P P G Q PP P P GP P
Sbjct: 442 -PLPSSPAQPPG-LTQSQNLPPP-----PASHPPTGLHQVAPQPPFAQHPFVPGGPPPIT 494
Query: 1053 NQQTPPSMMPGAVPG-SGHP----------GVAGNAPLGLPFGM-------------PPP 1088
P + P A PG S P +AG + LP PP
Sbjct: 495 PPTCPSTSTPPAGPGTSAQPPCSGAAASGGSIAGGSSCPLPTVQIKEEALDDAEEPESPP 554
Query: 1089 PPPPAPSIIP 1098
PPP +PS P
Sbjct: 555 PPPRSPSPEP 564
Score = 42.4 bits (98), Expect = 0.003
Identities = 43/137 (31%), Positives = 51/137 (37%), Gaps = 29/137 (21%)
Query: 952 QQMHQQQQQPP-PALPPG---SQPIPPTGAAGPPA-VHGLAVAPASVV------------ 994
Q M Q Q P PA PPG SQ +PP A+ PP +H +A P
Sbjct: 435 QLMPQSQPLPSSPAQPPGLTQSQNLPPPPASHPPTGLHQVAPQPPFAQHPFVPGGPPPIT 494
Query: 995 -PAPAGSGAPPGSLGPSEQIGQAGSTA-GPQQQQPAGAPQP----------GAVPPGVPP 1042
P + PP G S Q +G+ A G + P P A P PP
Sbjct: 495 PPTCPSTSTPPAGPGTSAQPPCSGAAASGGSIAGGSSCPLPTVQIKEEALDDAEEPESPP 554
Query: 1043 PGPHGPSPFPNQQTPPS 1059
P P PSP P PS
Sbjct: 555 PPPRSPSPEPTVVDTPS 571
Score = 35.0 bits (79), Expect = 0.43
Identities = 58/258 (22%), Positives = 92/258 (35%), Gaps = 29/258 (11%)
Query: 779 GGAIEEEAKEKTSEAPKKDEEKGKEGDSEKESEKSDGDPIVDPEKEKEPKEGQEEVLKEV 838
G + ++ +E +A ++ E+K +E E+E EK EKEKE + +E
Sbjct: 602 GSKLAKKREEAIEKAKREAEQKARE---EREREK---------EKEKERERERER----- 644
Query: 839 VESEGERKTKVERDIGEGNLS----TAAAAALAAAAVKAKHLAAVEERKIKSLVAL--LV 892
E E ER K EG LS + + +AAV AL L
Sbjct: 645 -EREAERAAKASSSAHEGRLSDPQLSGPGHMRPSFEPPPTTIAAVPPYIGPDTPALRTLS 703
Query: 893 ETQMKKLEIKLRHFEELETIMDREREALEYQRQQLLADRQAFHMEQLKYAEMRARQQHFQ 952
E + ++ L Y L +L+ E+R R+ +
Sbjct: 704 EYARPHVMSPTNRNHPFYMPLNPTDPLLAYHMPGLYNVDPTIRERELREREIREREIRER 763
Query: 953 QMHQQQQQPPPALPPGSQPIPPTGAAGPP---AVHGLAVAPASVVPAPAGSGAPPGSLGP 1009
++ ++ + PP P+ P AA P A H P + P P S P +
Sbjct: 764 ELRERMKPGFEVKPPELDPLHP--AANPMEHFARHSALTIPPTAGPHPFASFHPGLNPLE 821
Query: 1010 SEQIGQAGSTAGPQQQQP 1027
E++ AG P+ P
Sbjct: 822 RERLALAGPQLRPEMSYP 839
Score = 34.7 bits (78), Expect = 0.57
Identities = 43/141 (30%), Positives = 60/141 (42%), Gaps = 14/141 (9%)
Query: 913 MDREREAL---EYQRQQLLADRQA---FHMEQLKY--AEMRARQQHFQQM--HQQQQQPP 962
++RER AL + + + DR A H E++ ++ AR Q F H Q
Sbjct: 820 LERERLALAGPQLRPEMSYPDRLAAERIHAERMASLTSDPLARLQMFNVTPHHHQHSHIH 879
Query: 963 PALPPGSQPIPPTGAAGPPAVHGLAVAPASVVPAPAGSGAPPGSLGPSEQIGQAGSTAGP 1022
L Q G+AGP VH L V P + P A PPG+L P+ +GQ
Sbjct: 880 SHLHLHQQDPLHQGSAGP--VHPL-VDPLTAGPHLARFPYPPGTL-PNPLLGQPPHEHEM 935
Query: 1023 QQQQPAGAPQPGAVPPGVPPP 1043
+ G P P +P +PPP
Sbjct: 936 LRHPVFGTPYPRDLPGAIPPP 956
>gi|112382224 atrophin-1 like protein isoform a [Homo sapiens]
Length = 1566
Score = 81.6 bits (200), Expect = 4e-15
Identities = 125/530 (23%), Positives = 175/530 (33%), Gaps = 81/530 (15%)
Query: 737 SSGIAGTTSDEPERIEESGNDEARVEGQATDEKKEPKEPREGGGAIEEEAKEKTSEAPKK 796
+S A +TS + E +V+ +A+ K K RE + EEA +S+ K
Sbjct: 612 NSPSAASTSSNDSKAETVKKSAKKVKEEASSPLKSNKRQREKVASDTEEADRTSSKKTKT 671
Query: 797 DEEKGKEGDSEKESEKSDGDPIVDPEKEKEPKEGQEEVLKEVVESEGERKTKVERDIGEG 856
E SE E E SD V EG K DI +
Sbjct: 672 QEISRPNSPSEGEGESSDS---------------------RSVNDEGSSDPK---DIDQD 707
Query: 857 NLSTAAAAALAAAAVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDRE 916
N ST+ + +A ++ AL T +
Sbjct: 708 NRSTSPSIPSPQDNESDSDSSAQQQMLQAQPPALQAPTGVTPAPSSAPPGTPQLPTPGPT 767
Query: 917 REALEYQRQQLLADRQAFHMEQLKYAEMRARQQHFQQMH--QQQQQPPPALPPGSQPIPP 974
A Q QA + Q A + H QQ Q+ P P PP P PP
Sbjct: 768 PSATAVPPQGSPTASQAPNQPQAPTAPVP--HTHIQQAPALHPQRPPSPHPPPHPSPHPP 825
Query: 975 ----TGAAG----------------PPAVHGLAVAPASVVPAPAGS-GAPPGSLGPSEQI 1013
TG+AG PP H L P P P G PP + +
Sbjct: 826 LQPLTGSAGQPSAPSHAQPPLHGQGPPGPHSLQAGPLLQHPGPPQPFGLPPQASQGQAPL 885
Query: 1014 GQAGSTAGPQQ--QQPAGAPQPGAVPPGVPPPGPHGPSPFPNQQTPPS----MMPGAVPG 1067
G + + A P Q PA + P P P P P+ + PP+ +P
Sbjct: 886 GTSPAAAYPHTSLQLPASQSALQSQQPPREQPLPPAPLAMPHIKPPPTTPIPQLPAPQAH 945
Query: 1068 SGHPGVAGNAPLGLPFGMPPPPP-----------PPAPSIIPFGSLADSISI-NLPAPPN 1115
P ++G +P + +PPPP PP+ P + S + + PA P
Sbjct: 946 KHPPHLSGPSPFSMNANLPPPPALKPLSSLSTHHPPSAHPPPLQLMPQSQPLPSSPAQPP 1005
Query: 1116 LHGHHHHLPFAPGTLPPPNL------PVSMANPLHPNLPATTTMP-----SSLPLGPGLG 1164
+LP P + PP L P +P P P T P S+ P GPG
Sbjct: 1006 GLTQSQNLPPPPASHPPTGLHQVAPQPPFAQHPFVPGGPPPITPPTCPSTSTPPAGPG-- 1063
Query: 1165 SAAAQSPAIVAAVQGNLLPSASPLPDPGTPLPPDPTAPSPGTVTPVPPPQ 1214
+AQ P AA G + S P P + + + +P PPP+
Sbjct: 1064 -TSAQPPCSGAAASGGSIAGGSSCPLPTVQIKEEALDDAEEPESPPPPPR 1112
Score = 45.4 bits (106), Expect = 3e-04
Identities = 53/190 (27%), Positives = 66/190 (34%), Gaps = 43/190 (22%)
Query: 943 EMRARQQHFQQMHQQQQQP-------PPALPPGSQPIPPTGAAGPPAVHG--LAVAPASV 993
++ A Q H H P PP PP +P+ PP+ H L + P S
Sbjct: 938 QLPAPQAHKHPPHLSGPSPFSMNANLPP--PPALKPLSSLSTHHPPSAHPPPLQLMPQSQ 995
Query: 994 VPAPAGSGAPPGSLGPSEQIGQAGSTAGPQQQQPAGAPQPGAVPPGVPPPG-PHGPSPFP 1052
P P+ PPG L S+ + P P G Q PP P P GP P
Sbjct: 996 -PLPSSPAQPPG-LTQSQNLPPP-----PASHPPTGLHQVAPQPPFAQHPFVPGGPPPIT 1048
Query: 1053 NQQTPPSMMPGAVPG-SGHP----------GVAGNAPLGLPFGM-------------PPP 1088
P + P A PG S P +AG + LP PP
Sbjct: 1049 PPTCPSTSTPPAGPGTSAQPPCSGAAASGGSIAGGSSCPLPTVQIKEEALDDAEEPESPP 1108
Query: 1089 PPPPAPSIIP 1098
PPP +PS P
Sbjct: 1109 PPPRSPSPEP 1118
Score = 42.4 bits (98), Expect = 0.003
Identities = 43/137 (31%), Positives = 51/137 (37%), Gaps = 29/137 (21%)
Query: 952 QQMHQQQQQPP-PALPPG---SQPIPPTGAAGPPA-VHGLAVAPASVV------------ 994
Q M Q Q P PA PPG SQ +PP A+ PP +H +A P
Sbjct: 989 QLMPQSQPLPSSPAQPPGLTQSQNLPPPPASHPPTGLHQVAPQPPFAQHPFVPGGPPPIT 1048
Query: 995 -PAPAGSGAPPGSLGPSEQIGQAGSTA-GPQQQQPAGAPQP----------GAVPPGVPP 1042
P + PP G S Q +G+ A G + P P A P PP
Sbjct: 1049 PPTCPSTSTPPAGPGTSAQPPCSGAAASGGSIAGGSSCPLPTVQIKEEALDDAEEPESPP 1108
Query: 1043 PGPHGPSPFPNQQTPPS 1059
P P PSP P PS
Sbjct: 1109 PPPRSPSPEPTVVDTPS 1125
Score = 35.0 bits (79), Expect = 0.43
Identities = 58/258 (22%), Positives = 92/258 (35%), Gaps = 29/258 (11%)
Query: 779 GGAIEEEAKEKTSEAPKKDEEKGKEGDSEKESEKSDGDPIVDPEKEKEPKEGQEEVLKEV 838
G + ++ +E +A ++ E+K +E E+E EK EKEKE + +E
Sbjct: 1156 GSKLAKKREEAIEKAKREAEQKARE---EREREK---------EKEKERERERER----- 1198
Query: 839 VESEGERKTKVERDIGEGNLS----TAAAAALAAAAVKAKHLAAVEERKIKSLVAL--LV 892
E E ER K EG LS + + +AAV AL L
Sbjct: 1199 -EREAERAAKASSSAHEGRLSDPQLSGPGHMRPSFEPPPTTIAAVPPYIGPDTPALRTLS 1257
Query: 893 ETQMKKLEIKLRHFEELETIMDREREALEYQRQQLLADRQAFHMEQLKYAEMRARQQHFQ 952
E + ++ L Y L +L+ E+R R+ +
Sbjct: 1258 EYARPHVMSPTNRNHPFYMPLNPTDPLLAYHMPGLYNVDPTIRERELREREIREREIRER 1317
Query: 953 QMHQQQQQPPPALPPGSQPIPPTGAAGPP---AVHGLAVAPASVVPAPAGSGAPPGSLGP 1009
++ ++ + PP P+ P AA P A H P + P P S P +
Sbjct: 1318 ELRERMKPGFEVKPPELDPLHP--AANPMEHFARHSALTIPPTAGPHPFASFHPGLNPLE 1375
Query: 1010 SEQIGQAGSTAGPQQQQP 1027
E++ AG P+ P
Sbjct: 1376 RERLALAGPQLRPEMSYP 1393
Score = 34.7 bits (78), Expect = 0.57
Identities = 43/141 (30%), Positives = 60/141 (42%), Gaps = 14/141 (9%)
Query: 913 MDREREAL---EYQRQQLLADRQA---FHMEQLKY--AEMRARQQHFQQM--HQQQQQPP 962
++RER AL + + + DR A H E++ ++ AR Q F H Q
Sbjct: 1374 LERERLALAGPQLRPEMSYPDRLAAERIHAERMASLTSDPLARLQMFNVTPHHHQHSHIH 1433
Query: 963 PALPPGSQPIPPTGAAGPPAVHGLAVAPASVVPAPAGSGAPPGSLGPSEQIGQAGSTAGP 1022
L Q G+AGP VH L V P + P A PPG+L P+ +GQ
Sbjct: 1434 SHLHLHQQDPLHQGSAGP--VHPL-VDPLTAGPHLARFPYPPGTL-PNPLLGQPPHEHEM 1489
Query: 1023 QQQQPAGAPQPGAVPPGVPPP 1043
+ G P P +P +PPP
Sbjct: 1490 LRHPVFGTPYPRDLPGAIPPP 1510
>gi|112382216 atrophin-1 like protein isoform a [Homo sapiens]
Length = 1566
Score = 81.6 bits (200), Expect = 4e-15
Identities = 125/530 (23%), Positives = 175/530 (33%), Gaps = 81/530 (15%)
Query: 737 SSGIAGTTSDEPERIEESGNDEARVEGQATDEKKEPKEPREGGGAIEEEAKEKTSEAPKK 796
+S A +TS + E +V+ +A+ K K RE + EEA +S+ K
Sbjct: 612 NSPSAASTSSNDSKAETVKKSAKKVKEEASSPLKSNKRQREKVASDTEEADRTSSKKTKT 671
Query: 797 DEEKGKEGDSEKESEKSDGDPIVDPEKEKEPKEGQEEVLKEVVESEGERKTKVERDIGEG 856
E SE E E SD V EG K DI +
Sbjct: 672 QEISRPNSPSEGEGESSDS---------------------RSVNDEGSSDPK---DIDQD 707
Query: 857 NLSTAAAAALAAAAVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDRE 916
N ST+ + +A ++ AL T +
Sbjct: 708 NRSTSPSIPSPQDNESDSDSSAQQQMLQAQPPALQAPTGVTPAPSSAPPGTPQLPTPGPT 767
Query: 917 REALEYQRQQLLADRQAFHMEQLKYAEMRARQQHFQQMH--QQQQQPPPALPPGSQPIPP 974
A Q QA + Q A + H QQ Q+ P P PP P PP
Sbjct: 768 PSATAVPPQGSPTASQAPNQPQAPTAPVP--HTHIQQAPALHPQRPPSPHPPPHPSPHPP 825
Query: 975 ----TGAAG----------------PPAVHGLAVAPASVVPAPAGS-GAPPGSLGPSEQI 1013
TG+AG PP H L P P P G PP + +
Sbjct: 826 LQPLTGSAGQPSAPSHAQPPLHGQGPPGPHSLQAGPLLQHPGPPQPFGLPPQASQGQAPL 885
Query: 1014 GQAGSTAGPQQ--QQPAGAPQPGAVPPGVPPPGPHGPSPFPNQQTPPS----MMPGAVPG 1067
G + + A P Q PA + P P P P P+ + PP+ +P
Sbjct: 886 GTSPAAAYPHTSLQLPASQSALQSQQPPREQPLPPAPLAMPHIKPPPTTPIPQLPAPQAH 945
Query: 1068 SGHPGVAGNAPLGLPFGMPPPPP-----------PPAPSIIPFGSLADSISI-NLPAPPN 1115
P ++G +P + +PPPP PP+ P + S + + PA P
Sbjct: 946 KHPPHLSGPSPFSMNANLPPPPALKPLSSLSTHHPPSAHPPPLQLMPQSQPLPSSPAQPP 1005
Query: 1116 LHGHHHHLPFAPGTLPPPNL------PVSMANPLHPNLPATTTMP-----SSLPLGPGLG 1164
+LP P + PP L P +P P P T P S+ P GPG
Sbjct: 1006 GLTQSQNLPPPPASHPPTGLHQVAPQPPFAQHPFVPGGPPPITPPTCPSTSTPPAGPG-- 1063
Query: 1165 SAAAQSPAIVAAVQGNLLPSASPLPDPGTPLPPDPTAPSPGTVTPVPPPQ 1214
+AQ P AA G + S P P + + + +P PPP+
Sbjct: 1064 -TSAQPPCSGAAASGGSIAGGSSCPLPTVQIKEEALDDAEEPESPPPPPR 1112
Score = 45.4 bits (106), Expect = 3e-04
Identities = 53/190 (27%), Positives = 66/190 (34%), Gaps = 43/190 (22%)
Query: 943 EMRARQQHFQQMHQQQQQP-------PPALPPGSQPIPPTGAAGPPAVHG--LAVAPASV 993
++ A Q H H P PP PP +P+ PP+ H L + P S
Sbjct: 938 QLPAPQAHKHPPHLSGPSPFSMNANLPP--PPALKPLSSLSTHHPPSAHPPPLQLMPQSQ 995
Query: 994 VPAPAGSGAPPGSLGPSEQIGQAGSTAGPQQQQPAGAPQPGAVPPGVPPPG-PHGPSPFP 1052
P P+ PPG L S+ + P P G Q PP P P GP P
Sbjct: 996 -PLPSSPAQPPG-LTQSQNLPPP-----PASHPPTGLHQVAPQPPFAQHPFVPGGPPPIT 1048
Query: 1053 NQQTPPSMMPGAVPG-SGHP----------GVAGNAPLGLPFGM-------------PPP 1088
P + P A PG S P +AG + LP PP
Sbjct: 1049 PPTCPSTSTPPAGPGTSAQPPCSGAAASGGSIAGGSSCPLPTVQIKEEALDDAEEPESPP 1108
Query: 1089 PPPPAPSIIP 1098
PPP +PS P
Sbjct: 1109 PPPRSPSPEP 1118
Score = 42.4 bits (98), Expect = 0.003
Identities = 43/137 (31%), Positives = 51/137 (37%), Gaps = 29/137 (21%)
Query: 952 QQMHQQQQQPP-PALPPG---SQPIPPTGAAGPPA-VHGLAVAPASVV------------ 994
Q M Q Q P PA PPG SQ +PP A+ PP +H +A P
Sbjct: 989 QLMPQSQPLPSSPAQPPGLTQSQNLPPPPASHPPTGLHQVAPQPPFAQHPFVPGGPPPIT 1048
Query: 995 -PAPAGSGAPPGSLGPSEQIGQAGSTA-GPQQQQPAGAPQP----------GAVPPGVPP 1042
P + PP G S Q +G+ A G + P P A P PP
Sbjct: 1049 PPTCPSTSTPPAGPGTSAQPPCSGAAASGGSIAGGSSCPLPTVQIKEEALDDAEEPESPP 1108
Query: 1043 PGPHGPSPFPNQQTPPS 1059
P P PSP P PS
Sbjct: 1109 PPPRSPSPEPTVVDTPS 1125
Score = 35.0 bits (79), Expect = 0.43
Identities = 58/258 (22%), Positives = 92/258 (35%), Gaps = 29/258 (11%)
Query: 779 GGAIEEEAKEKTSEAPKKDEEKGKEGDSEKESEKSDGDPIVDPEKEKEPKEGQEEVLKEV 838
G + ++ +E +A ++ E+K +E E+E EK EKEKE + +E
Sbjct: 1156 GSKLAKKREEAIEKAKREAEQKARE---EREREK---------EKEKERERERER----- 1198
Query: 839 VESEGERKTKVERDIGEGNLS----TAAAAALAAAAVKAKHLAAVEERKIKSLVAL--LV 892
E E ER K EG LS + + +AAV AL L
Sbjct: 1199 -EREAERAAKASSSAHEGRLSDPQLSGPGHMRPSFEPPPTTIAAVPPYIGPDTPALRTLS 1257
Query: 893 ETQMKKLEIKLRHFEELETIMDREREALEYQRQQLLADRQAFHMEQLKYAEMRARQQHFQ 952
E + ++ L Y L +L+ E+R R+ +
Sbjct: 1258 EYARPHVMSPTNRNHPFYMPLNPTDPLLAYHMPGLYNVDPTIRERELREREIREREIRER 1317
Query: 953 QMHQQQQQPPPALPPGSQPIPPTGAAGPP---AVHGLAVAPASVVPAPAGSGAPPGSLGP 1009
++ ++ + PP P+ P AA P A H P + P P S P +
Sbjct: 1318 ELRERMKPGFEVKPPELDPLHP--AANPMEHFARHSALTIPPTAGPHPFASFHPGLNPLE 1375
Query: 1010 SEQIGQAGSTAGPQQQQP 1027
E++ AG P+ P
Sbjct: 1376 RERLALAGPQLRPEMSYP 1393
Score = 34.7 bits (78), Expect = 0.57
Identities = 43/141 (30%), Positives = 60/141 (42%), Gaps = 14/141 (9%)
Query: 913 MDREREAL---EYQRQQLLADRQA---FHMEQLKY--AEMRARQQHFQQM--HQQQQQPP 962
++RER AL + + + DR A H E++ ++ AR Q F H Q
Sbjct: 1374 LERERLALAGPQLRPEMSYPDRLAAERIHAERMASLTSDPLARLQMFNVTPHHHQHSHIH 1433
Query: 963 PALPPGSQPIPPTGAAGPPAVHGLAVAPASVVPAPAGSGAPPGSLGPSEQIGQAGSTAGP 1022
L Q G+AGP VH L V P + P A PPG+L P+ +GQ
Sbjct: 1434 SHLHLHQQDPLHQGSAGP--VHPL-VDPLTAGPHLARFPYPPGTL-PNPLLGQPPHEHEM 1489
Query: 1023 QQQQPAGAPQPGAVPPGVPPP 1043
+ G P P +P +PPP
Sbjct: 1490 LRHPVFGTPYPRDLPGAIPPP 1510
>gi|19718731 bromodomain-containing protein 4 isoform long [Homo
sapiens]
Length = 1362
Score = 78.6 bits (192), Expect = 3e-14
Identities = 135/579 (23%), Positives = 201/579 (34%), Gaps = 109/579 (18%)
Query: 700 FSKMKEEVPTALVEAHVRKVEEAAKVTG---KADPAFGLESSGIAGTTSDEPERIEE--- 753
F+KM +E +V V KV +D + S + T E ER +
Sbjct: 454 FAKMPDEPEEPVVAVSSPAVPPPTKVVAPPSSSDSSSDSSSDSDSSTDDSEEERAQRLAE 513
Query: 754 ---------------SGNDEARVEGQATDEKKEPKEPREGGGAIEEEAKEKTSEAPKKDE 798
S + + + + D+K++ KE + +EE K K E P K
Sbjct: 514 LQEQLKAVHEQLAALSQPQQNKPKKKEKDKKEKKKEKHKRKEEVEENKKSKAKEPPPKKT 573
Query: 799 EKGKEGDS-----EKESEKSDGDPIVDPEKEKEPK----EGQEEVLKEVVESEGERKTKV 849
+K +S E KS P + E+E + K E + ++ ++ + GE+ +V
Sbjct: 574 KKNNSSNSNVSKKEPAPMKSKPPPTYESEEEDKCKPMSYEEKRQLSLDINKLPGEKLGRV 633
Query: 850 ERDIG--EGNLSTAAAAALAAAAVKAKHLAAVE-ERKIKSLVALLVETQMKKLEI----- 901
I E +L + + K E ER + S + + Q +K+++
Sbjct: 634 VHIIQSREPSLKNSNPDEIEIDFETLKPSTLRELERYVTSCLRKKRKPQAEKVDVIAGSS 693
Query: 902 KLRHFEELETIMDREREALEYQRQQLLADRQAFHMEQLKYAEMRARQQHFQQMHQQQQQP 961
K++ F E+ E + + + ++ + + K R +++H HQQ QQ
Sbjct: 694 KMKGFSSSESESSSESSSSDSED----SETEMAPKSKKKGHPGREQKKHHHHHHQQMQQA 749
Query: 962 PPALPPGSQPIPPTGAAGPPAVHGLAVAPASVVP--------APAGSGAPPGSLGPSEQI 1013
P +P QP PP PP P P APA +PP + +
Sbjct: 750 PAPVP--QQPPPPPQQPPPPPPPQQQQQPPPPPPPPSMPQQAAPAMKSSPPPFIATQVPV 807
Query: 1014 ------GQAGSTAGPQQQQPAGAPQPGAVPPGVPPPGPHGPSPFPNQQ--TPPSMMPGAV 1065
G G Q PQP +PP +P P H P NQ P + A+
Sbjct: 808 LEPQLPGSVFDPIGHFTQPILHLPQP-ELPPHLPQPPEHSTPPHLNQHAVVSPPALHNAL 866
Query: 1066 PGSGHPGVAGNAPLGLPFGMPPPPPPPAPSIIPFGSLADSISINLPAPPNLHGHHHHLPF 1125
P P N LP P P PPA S A + + LP PP
Sbjct: 867 P--QQPSRPSNRAAALP---PKPARPPAV------SPALTQTPLLPQPP----------- 904
Query: 1126 APGTLPPPNLPVSMANPLHPNLPATTTMPSSLPLGPGLGSAAAQSPAIVAAVQGNLLPSA 1185
PP + + P P T+M L L L +P LLPS
Sbjct: 905 ---MAQPPQV---LLEDEEPPAPPLTSMQMQLYL-QQLQKVQPPTP---------LLPSV 948
Query: 1186 SPLPDPGTPLPPDP----------TAPSPGTVTPVPPPQ 1214
P PLPP P P P P PPPQ
Sbjct: 949 KVQSQPPPPLPPPPHPSVQQQLQQQPPPPPPPQPQPPPQ 987
Score = 48.9 bits (115), Expect = 3e-05
Identities = 69/289 (23%), Positives = 94/289 (32%), Gaps = 57/289 (19%)
Query: 961 PPPALPPGSQP-------IPPTGAAGPPAVHGLAVAPASVVPAPAGSGA----------- 1002
P PA PP P +P A PP V + PAP +
Sbjct: 882 PKPARPPAVSPALTQTPLLPQPPMAQPPQV----LLEDEEPPAPPLTSMQMQLYLQQLQK 937
Query: 1003 --PPGSLGPSEQIGQAGSTAGPQQQQPAGAPQPGAVPPGVPPPGPHGPSPFPNQQTPPSM 1060
PP L PS ++ P P+ Q PP PPP P P +Q P +
Sbjct: 938 VQPPTPLLPSVKVQSQPPPPLPPPPHPSVQQQLQQQPPPPPPPQPQPPPQQQHQPPPRPV 997
Query: 1061 MPGAVPGSGH----PGVAGNAPLGLPFGMPPPPPPPAPSIIPFGSLADSISINLPAPPNL 1116
+ S H P G P P G PPPP PA P +
Sbjct: 998 HLQPMQFSTHIQQPPPPQGQQPPHPPPGQQPPPPQPA------------------KPQQV 1039
Query: 1117 HGHHHHL------PFAPGTLPPPNLPVSMANPLHPNLPATT----TMPSSLPLGPGLGSA 1166
HHH P++ G L P+ + +P + T + P L +A
Sbjct: 1040 IQHHHSPRHHKSDPYSTGHLREAPSPLMIHSPQMSQFQSLTHQSPPQQNVQPKKQELRAA 1099
Query: 1167 AAQSPAIVAAVQGNLLPSASPLPDPGTP-LPPDPTAPSPGTVTPVPPPQ 1214
+ P + V+ + S +P +P L P+P PV PQ
Sbjct: 1100 SVVQPQPLVVVKEEKIHSPIIRSEPFSPSLRPEPPKHPESIKAPVHLPQ 1148
Score = 48.9 bits (115), Expect = 3e-05
Identities = 67/266 (25%), Positives = 84/266 (31%), Gaps = 51/266 (19%)
Query: 950 HFQQMHQQQQQPPPALPPGSQPIPPTGAAGPPAVHGLAVAPASVVPAPAGSGAPPGSLGP 1009
H Q QQQPPP PP QP P PP P L P
Sbjct: 963 HPSVQQQLQQQPPPPPPPQPQPPPQQQHQPPPR---------------------PVHLQP 1001
Query: 1010 SEQIGQAGSTAGPQQQQPAGAPQPGAVPPGVPPPGPHGPSPFPNQQTPPSMMPGAVPGSG 1069
+ PQ QQP P PG P PPP P P P +G
Sbjct: 1002 MQFSTHIQQPPPPQGQQPP-HPPPGQQP---PPPQPAKPQQVIQHHHSPRHHKSDPYSTG 1057
Query: 1070 HPGVAG-----NAPLGLPFGMPPPPPPPAPSIIPFGSLADSISINLPAP------PNLHG 1118
H A ++P F PP ++ P + S+ P P +H
Sbjct: 1058 HLREAPSPLMIHSPQMSQFQSLTHQSPPQQNVQPKKQELRAASVVQPQPLVVVKEEKIHS 1117
Query: 1119 H-HHHLPFAPGTLP-PPNLPVSMANPLHPNLPATTTMPSSLPLGPGLGSAAAQSPAIVAA 1176
PF+P P PP P S+ P+H LP P + P ++
Sbjct: 1118 PIIRSEPFSPSLRPEPPKHPESIKAPVH------------LPQRPEMKPVDVGRP-VIRP 1164
Query: 1177 VQGNLLPSASPLPDPGTPLPPDPTAP 1202
+ N P +P D P P AP
Sbjct: 1165 PEQNAPPPGAPDKDKQKQEPKTPVAP 1190
Score = 38.5 bits (88), Expect = 0.039
Identities = 34/151 (22%), Positives = 65/151 (43%), Gaps = 18/151 (11%)
Query: 815 GDPIVDPEKEKEPKEGQEEVLKEVVESEGERKTKVERDIGEGNLSTAAAAA-----LAAA 869
G P++ P ++ P G + K+ + E + ++D+ N+ + A+ ++
Sbjct: 1158 GRPVIRPPEQNAPPPGAPD--KDKQKQEPKTPVAPKKDLKIKNMGSWASLVQKHPTTPSS 1215
Query: 870 AVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREREALEYQRQQLLA 929
K+ + + R+ A E + K L+ + H E +E+E L +R +
Sbjct: 1216 TAKSSSDSFEQFRR----AAREKEEREKALKAQAEHAE-------KEKERLRQERMRSRE 1264
Query: 930 DRQAFHMEQLKYAEMRARQQHFQQMHQQQQQ 960
D A + + E R RQ+ QQ Q+QQQ
Sbjct: 1265 DEDALEQARRAHEEARRRQEQQQQQRQEQQQ 1295
Score = 36.2 bits (82), Expect = 0.19
Identities = 43/151 (28%), Positives = 57/151 (37%), Gaps = 18/151 (11%)
Query: 1017 GSTAGPQQQQPAGAPQPGAVPPGVPPPGPHGPSPFPNQQTPPSMMPGAVPGSGHPGVAGN 1076
G + P Q + PQ P PPP P PFP ++ P + + V
Sbjct: 192 GVSTVPNTTQASTPPQTQTPQPN-PPPVQATPHPFP------AVTPDLIVQTPVMTVVPP 244
Query: 1077 APLGLPFGMPP-PPPPPAPSIIPFGSLADSISINLPAPPNLHGHHHHL-PFAPGTLPPPN 1134
PL P +PP P PPPAP+ P S I+ G P T+ P +
Sbjct: 245 QPLQTPPPVPPQPQPPPAPAPQPVQSHPPIIAATPQPVKTKKGVKRKADTTTPTTIDPIH 304
Query: 1135 LPVSMANPLHPNLPATTTM----PSSLPLGP 1161
P S+ P P TT + SS P+ P
Sbjct: 305 EPPSL-----PPEPKTTKLGQRRESSRPVKP 330
Score = 36.2 bits (82), Expect = 0.19
Identities = 56/199 (28%), Positives = 76/199 (38%), Gaps = 38/199 (19%)
Query: 924 RQQLLADRQAFHMEQLKYAEMRARQQHFQQMHQQQQQPPPALPPGSQPIPPTGAAGPPAV 983
+QQ + H++ ++++ H QQ Q Q PP PPG QP PP A P V
Sbjct: 987 QQQHQPPPRPVHLQPMQFST------HIQQPPPPQGQQPPHPPPGQQP-PPPQPAKPQQV 1039
Query: 984 HGLAVAPASVVPAPAGSG----APPGSLGPSEQIGQAGS---------TAGPQQQQPAGA 1030
+P P +G AP + S Q+ Q S P++Q+ A
Sbjct: 1040 IQHHHSPRHHKSDPYSTGHLREAPSPLMIHSPQMSQFQSLTHQSPPQQNVQPKKQELRAA 1099
Query: 1031 ----PQPGAVPPGVPPPGPHGP----SPF-PNQQTPPSMMPGAVPGSGH-PGVAGNAP-- 1078
PQP V V H P PF P+ + P P ++ H P P
Sbjct: 1100 SVVQPQPLVV---VKEEKIHSPIIRSEPFSPSLRPEPPKHPESIKAPVHLPQRPEMKPVD 1156
Query: 1079 LGLPFGMPP---PPPPPAP 1094
+G P PP PPP AP
Sbjct: 1157 VGRPVIRPPEQNAPPPGAP 1175
Score = 30.8 bits (68), Expect = 8.2
Identities = 28/123 (22%), Positives = 48/123 (39%), Gaps = 10/123 (8%)
Query: 282 NSPDSDRRDKKGGNYKKRKRSPSPSPTPEAKKKNAKKGPSTPYTKSKRGHREEEQEDLTK 341
N P +DKK +K KR E KK AK+ P K+ + +++
Sbjct: 534 NKPKKKEKDKKEKKKEKHKRK---EEVEENKKSKAKEPPPKKTKKNNSSNSNVSKKEPAP 590
Query: 342 DMDEPSPVPNVEEVTLPKTVNTKK------DSESAP-VKGGTMTDLDEQEDESMETTGKD 394
+P P EE K ++ ++ D P K G + + + + S++ + D
Sbjct: 591 MKSKPPPTYESEEEDKCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPD 650
Query: 395 EDE 397
E E
Sbjct: 651 EIE 653
>gi|32964830 collagen, type VIII, alpha 2 [Homo sapiens]
Length = 703
Score = 77.8 bits (190), Expect = 6e-14
Identities = 90/271 (33%), Positives = 106/271 (39%), Gaps = 36/271 (13%)
Query: 962 PPALP-PGSQPIPPTGAAGPPAVHGLAVAPASVVPAPAG-SGA--PPGSLGPSEQIGQAG 1017
PP +P P +P G GPP V G+ V A+ +P P G SGA PG+ GP IG G
Sbjct: 256 PPGVPGPRGEP-GAVGPKGPPGVDGVGVPGAAGLPGPQGPSGAKGEPGTRGPPGLIGPTG 314
Query: 1018 STAGPQQQQPAGAPQPGAVPPGVPPPGPHGPSPFPNQQTPPSMMPGAVPGSGHPGVAGNA 1077
P P G P VP + G G P +Q P + G PG+ G+A
Sbjct: 315 -YGMPGLPGPKGDRGPAGVPGLLGDRGEPGEDGEPGEQGPQGL-------GGPPGLPGSA 366
Query: 1078 PLGLPFGMPPPPP-----PPAPSIIPFGSLADSISINLPAPPNLHGHHHHLPFA---PGT 1129
GLP PP P P P +P G D L P + G LP A PG
Sbjct: 367 --GLPGRRGPPGPKGEAGPGGPPGVP-GIRGDQGPSGLAGKPGVPG-ERGLPGAHGPPGP 422
Query: 1130 LPPPNLPVSMANPLHPNLPATTTMPS--SLPLGPGL----GSAAAQSPAIVAAVQGNLLP 1183
P P P P + LP PGL G Q PA QG LP
Sbjct: 423 TGPKGEPGFTGRPGGPGVAGALGQKGDLGLPGQPGLRGPSGIPGLQGPAGPIGPQG--LP 480
Query: 1184 SASPLPDPGTPLPP-DPTAPSPGTVTPVPPP 1213
+PG P PP + A PGT P PP
Sbjct: 481 GLK--GEPGLPGPPGEGRAGEPGTAGPTGPP 509
Score = 77.4 bits (189), Expect = 8e-14
Identities = 85/275 (30%), Positives = 99/275 (36%), Gaps = 55/275 (20%)
Query: 961 PPPALPPGSQPIPPTGAAGPPAVHGLAVAPASVVPAPAGSGAPPGSLGPSEQIGQAGSTA 1020
P P P G++ P G GPP + G +P P G P G G G+ G
Sbjct: 289 PGPQGPSGAKGEP--GTRGPPGLIGPTGYGMPGLPGPKGDRGPAGVPGLLGDRGEPGEDG 346
Query: 1021 GPQQQQPAGAPQPGAVPPGVPPPGPHGPSPFPNQQTPPSMMPGAVPG----------SGH 1070
P +Q P G P +P PG GP P P + P PG VPG +G
Sbjct: 347 EPGEQGPQGLGGPPGLPGSAGLPGRRGP-PGPKGEAGPGGPPG-VPGIRGDQGPSGLAGK 404
Query: 1071 PGVAGNAPLGLPFGMPPPPPPPAPSIIP-----------FGSLADSISINLPAPPNLHGH 1119
PGV G GLP G PP P P P G+L + LP P L G
Sbjct: 405 PGVPGER--GLP-GAHGPPGPTGPKGEPGFTGRPGGPGVAGALGQKGDLGLPGQPGLRG- 460
Query: 1120 HHHLPFAPGTLPPPNLPVSMANPLHP-NLPATTTMPSSLPLGPGLGSAAAQSPAIVAAVQ 1178
P +P P A P+ P LP P LP PG G A
Sbjct: 461 -------PSGIPGLQGP---AGPIGPQGLPGLKGEP-GLPGPPGEGRAGEPG-------- 501
Query: 1179 GNLLPSASPLPDPGTPLPPDPTAPSPGTVTPVPPP 1213
+A P PG P P T P PG P PP
Sbjct: 502 -----TAGPTGPPGVPGSPGITGP-PGPPGPPGPP 530
Score = 65.5 bits (158), Expect = 3e-10
Identities = 76/250 (30%), Positives = 86/250 (34%), Gaps = 36/250 (14%)
Query: 976 GAAGPPAVHGLAV---APASVVPAPA-GSGAPPGSLGPSEQIGQAGSTAGPQQQQPAGAP 1031
G GPP G P ++P G PPG GP G G P +P
Sbjct: 50 GPVGPPFREGKGQYLEMPLPLLPMDLKGEPGPPGKPGPRGPPGPPGFPGKPGMGKPGLHG 109
Query: 1032 QPG-AVPPGVPPPGPHGPSPFPNQQTPPSMMPGAVPGSGHPGVAGNAPLGLPFGMPPPPP 1090
QPG A PPG G GP P + PP PG G PG+ G+ L G P PP
Sbjct: 110 QPGPAGPPGFSRMGKAGPPGLPGKVGPPG-QPGL---RGEPGIRGDQGLR---GPPGPPG 162
Query: 1091 PPAPSIIPFGSLADSISINLPAPPNLHGHHHHLPFAPGTLPPPNLPVSMANPLHPNLPAT 1150
P PS I +P P G +P PG P P L
Sbjct: 163 LPGPS-----------GITIPGKPGAQG----VPGPPGFQGEPGPQGEPGPPGDRGLKGD 207
Query: 1151 TTM-PSSLPLGPGLGSAAAQSPAIVAAVQGNLLPSASPLP----DPGTPLPPDPTAP--S 1203
+ LP PG G A P + G P LP D G PP P
Sbjct: 208 NGVGQPGLPGAPGQG--GAPGPPGLPGPAGLGKPGLDGLPGAPGDKGESGPPGVPGPRGE 265
Query: 1204 PGTVTPVPPP 1213
PG V P PP
Sbjct: 266 PGAVGPKGPP 275
Score = 64.7 bits (156), Expect = 5e-10
Identities = 57/158 (36%), Positives = 67/158 (42%), Gaps = 31/158 (19%)
Query: 962 PPALPPGSQPIPPTGAAGPPAVHGLAVAPASVVPAPAGSGAPPGSLGPSEQIGQAGSTAG 1021
PP +P P+G AG P V G P G+ PPG GP + G G G
Sbjct: 386 PPGVPGIRGDQGPSGLAGKPGVPGERGLP--------GAHGPPGPTGPKGEPGFTGRPGG 437
Query: 1022 PQ------QQQPAGAP-QPGAV-PPGVP----PPGPHGPSPFPNQQTPPSMMPGAVPG-- 1067
P Q+ G P QPG P G+P P GP GP P + P + PG PG
Sbjct: 438 PGVAGALGQKGDLGLPGQPGLRGPSGIPGLQGPAGPIGPQGLPGLKGEPGL-PGP-PGEG 495
Query: 1068 -SGHPGVAG-NAPLGLP-----FGMPPPPPPPAPSIIP 1098
+G PG AG P G+P G P PP PP P P
Sbjct: 496 RAGEPGTAGPTGPPGVPGSPGITGPPGPPGPPGPPGAP 533
Score = 60.1 bits (144), Expect = 1e-08
Identities = 74/265 (27%), Positives = 92/265 (34%), Gaps = 34/265 (12%)
Query: 960 QPPPALPPGSQPIPPTGAAGPPAVHGL---AVAPASVVPAPAGSGAPPGSLGPSEQIGQA 1016
+P P PPG P G P +HG A P AG PG +GP Q G
Sbjct: 84 KPGPRGPPGPPGFPGKPGMGKPGLHGQPGPAGPPGFSRMGKAGPPGLPGKVGPPGQPGLR 143
Query: 1017 GSTAGPQQQQPAGAPQPGAV--PPGVPPPGPHGPSPFPNQQTPPSMMPGAVPGSGHPGVA 1074
G Q G P P + P G+ PG G P PP G G PG
Sbjct: 144 GEPGIRGDQGLRGPPGPPGLPGPSGITIPGKPGAQGVPG---PPGFQ-GEPGPQGEPGPP 199
Query: 1075 GNAPLGLPFGMPPPPPPPAPSIIPFGSLADSISINLPAPPNLHGHHHHLPFA---PGTLP 1131
G+ L G+ P P AP P PP L G P PG
Sbjct: 200 GDRGLKGDNGVGQPGLPGAPG-----------QGGAPGPPGLPG-----PAGLGKPGLDG 243
Query: 1132 PPNLPVSMANPLHPNLPATTTMPSSL-PLG-PGLGSAAAQSPAIVAAVQGNLLPSASPLP 1189
P P P +P P ++ P G PG+ A + QG PS +
Sbjct: 244 LPGAPGDKGESGPPGVPGPRGEPGAVGPKGPPGVDGVGVPGAAGLPGPQG---PSGAK-G 299
Query: 1190 DPGTPLPPDPTAPSPGTVTPVPPPQ 1214
+PGT PP P+ + +P P+
Sbjct: 300 EPGTRGPPGLIGPTGYGMPGLPGPK 324
Score = 43.1 bits (100), Expect = 0.002
Identities = 35/107 (32%), Positives = 41/107 (38%), Gaps = 8/107 (7%)
Query: 963 PALPPGSQPIPPTGAAGPPAVHGLAVAPASVVPAPAGSGAPPGSLGPSEQIGQAGSTAGP 1022
P+ PG Q P G GP + GL P P G PG+ GP+ G G P
Sbjct: 461 PSGIPGLQG--PAGPIGPQGLPGLKGEPGLPGPPGEGRAGEPGTAGPT---GPPGVPGSP 515
Query: 1023 QQQQPAGAPQPGAVPPGVPPPGPHGPSPFPNQQTPPSMMPGAVPGSG 1069
P G P P PPG PG + P + GAV G G
Sbjct: 516 GITGPPGPPGPPG-PPGA--PGAFDETGIAGLHLPNGGVEGAVLGKG 559
>gi|4826998 splicing factor proline/glutamine rich (polypyrimidine
tract binding protein associated) [Homo sapiens]
Length = 707
Score = 77.8 bits (190), Expect = 6e-14
Identities = 69/210 (32%), Positives = 75/210 (35%), Gaps = 39/210 (18%)
Query: 955 HQQQQQPPPALPPGSQPIP------------------PTGAAGPPAVHGLAVAPASVVPA 996
HQQQQQPPP PP QP P P ++ P G AP
Sbjct: 66 HQQQQQPPPQQPPPQQPPPHQPPPHPQPHQQQQPPPPPQDSSKPVVAQGPGPAPGVGSAP 125
Query: 997 PAGSGAPPGSLGPSEQIGQAGSTAGPQQQQPAGAPQPGAVPPGVPPPGP--HGPSPFPNQ 1054
PA S APP + P GS GP P P + PPG PPP P G P Q
Sbjct: 126 PASSSAPPAT--PPTSGAPPGSGPGP---TPTPPPAVTSAPPGAPPPTPPSSGVPTTPPQ 180
Query: 1055 QTPPSMMPGAVPGSGHPGVAGNAPLGLPFGMPPPPPPPAPSIIPFGSLADSISINLPAPP 1114
P P AVPG G G P G G P P P G S P PP
Sbjct: 181 AGGPPPPPAAVPGPGPGPKQGPGPGGPKGGKMPGGPKPG------GGPGLSTPGGHPKPP 234
Query: 1115 N------LHGHHHHLPF--APGTLPPPNLP 1136
+ G HH P+ PPP P
Sbjct: 235 HRGGGEPRGGRQHHPPYHQQHHQGPPPGGP 264
Score = 60.8 bits (146), Expect = 7e-09
Identities = 66/212 (31%), Positives = 73/212 (34%), Gaps = 28/212 (13%)
Query: 997 PAGSGAPPGSLGPSEQIGQAGSTAGPQQQQPAGAPQPGAVPPGVPPPGPHGPSPFPNQQT 1056
P G G PG GP I QQQ P P P PP PPP P P QQ
Sbjct: 46 PMGPG--PGQSGPKPPI-PPPPPHQQQQQPPPQQPPPQQPPPHQPPP---HPQPHQQQQP 99
Query: 1057 PP----SMMPGAVPGSGHPGVAGNAPLGLPFGMPPPPPPPAPSIIPFGSLADSISINLPA 1112
PP S P G G G+AP P PP P S P GS P
Sbjct: 100 PPPPQDSSKPVVAQGPGPAPGVGSAP---PASSSAPPATPPTSGAPPGSGPGP----TPT 152
Query: 1113 PPNLHGHHHHLPFAPGTLPPPNLPVSMANPLHPNLPATTTMPSSLPLGPGLGSAAAQSPA 1172
PP + AP PPP P S P P+++P GPG G P
Sbjct: 153 PPPA------VTSAPPGAPPPTPPSSGVPTTPPQAGGPPPPPAAVP-GPGPGPKQGPGP- 204
Query: 1173 IVAAVQGNLLPSASPLPDPGTPLPPDPTAPSP 1204
+G +P P P G L P P
Sbjct: 205 --GGPKGGKMP-GGPKPGGGPGLSTPGGHPKP 233
Score = 60.1 bits (144), Expect = 1e-08
Identities = 61/223 (27%), Positives = 72/223 (32%), Gaps = 48/223 (21%)
Query: 1002 APPGSLGPSEQIGQAGSTAGPQQQQPAGAPQPGAVPPGVPPPGPHGPSPFPNQQTPPSMM 1061
+PP +G ++ G G GP Q P P +PPP PH P Q PP
Sbjct: 33 SPPPGMGLNQNRGPMGP--GPGQSGPK---------PPIPPPPPHQQQQQPPPQQPPPQQ 81
Query: 1062 PGAVPGSGHPGVAGNAPLGLPFGMPPPPPPPAPSIIPF-----------GSLADSISINL 1110
P HP P PPPPP S P GS + S
Sbjct: 82 PPPHQPPPHPQ---------PHQQQQPPPPPQDSSKPVVAQGPGPAPGVGSAPPASSSAP 132
Query: 1111 PAPPNLHGHHHHLPFAPGTLPPPNLPVSMANPLHPNLPATTTMPSSLPLGPGLGSAAAQS 1170
PA P G P G P P P ++ + P P T S +P P
Sbjct: 133 PATPPTSG----APPGSGPGPTPTPPPAVTSA-PPGAPPPTPPSSGVPTTPPQAGGPPPP 187
Query: 1171 PAIVAAVQGNLLPSASPLPDPGTPLPPDPTAPSPGTVTPVPPP 1213
PA V P P PG P P P G + P P
Sbjct: 188 PAAV------------PGPGPGPKQGPGPGGPKGGKMPGGPKP 218
>gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapiens]
Length = 855
Score = 77.4 bits (189), Expect = 8e-14
Identities = 91/331 (27%), Positives = 118/331 (35%), Gaps = 85/331 (25%)
Query: 960 QPPPALPPGSQPIPPTGAAGPPAVHGLAV----APASVVPAPAGSG--APPGSLGPSEQI 1013
Q PP+ PP S P+ P P A + LAV AP S P+P +PP S S
Sbjct: 406 QAPPS-PPASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSP-- 462
Query: 1014 GQAGSTAGPQQQQPAGAPQPGAVPPGVPPPGPHGPSPFPNQQTPPSMM------------ 1061
S P Q P+ A P VPP P P PS P Q PP +
Sbjct: 463 ----SATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQLAKPPPQ 518
Query: 1062 ----------------PGAVPGSGHPGVAGNAPLGLPFGMPPPPPPP---APSIIPFGSL 1102
P + PG + + P+ P PPP PP AP + S
Sbjct: 519 APPALATPPLQALPSPPASFPGQAPFSPSASLPMS-PLATPPPQAPPVLAAPLLQVPPSP 577
Query: 1103 ADSISINLPAPP-------NLHGHHHHLPFAPGTLPPPNLPVS--MANP-LHPNLPATTT 1152
S ++ P P ++ G L APG PPP+ S ++ P L + + T+
Sbjct: 578 PASPTLQAPRRPPTPGPDTSVSGPRLTLALAPGPPPPPSRSPSSTLSGPDLAGHSSSATS 637
Query: 1153 MPSSL---PLGPGLGSAAAQSPAIVAAVQGNLLPSASPLPD------PGTPLP------- 1196
P L GP G+AA+ P A S P P PG PLP
Sbjct: 638 TPEELRGYDSGPEGGAAASPPPDAELAACHPAAWSRGPAPPLAFRGAPGAPLPWPPATGP 697
Query: 1197 --------------PDPTAPSPGTVTPVPPP 1213
P+ P+PG + P P P
Sbjct: 698 GSADGLCTIYETEGPESATPAPGALDPGPSP 728
Score = 72.4 bits (176), Expect = 2e-12
Identities = 88/308 (28%), Positives = 113/308 (36%), Gaps = 60/308 (19%)
Query: 958 QQQPPPALP--PGSQPIPPTGAAGPPAVHGLAVAPASVVPAPAGSGAPPG----SLG-PS 1010
Q Q PP LP P S + A P AP S+ P+ PP SLG P+
Sbjct: 314 QSQAPPTLPATPHSSSLTCQLATPLPLAPPSPSAPPSLQTLPSPPATPPSQATTSLGSPT 373
Query: 1011 EQIGQA---GSTAGPQQQQPAGAPQPGAVPPGVPPPGPHGPSPFPNQQTPPSMMPGAV-- 1065
Q + P P AP A+PP PP P P TP P A+
Sbjct: 374 LQATHSFLPSPPLSPLATPPPQAPPALALPPLQAPPSPPASPPLSPLATPSPQAPNALAV 433
Query: 1066 -----PGSGHPGVAGNAPLGLPFGMPPPPPPPAPSIIPFGSLADSISI-------NLPAP 1113
P S P + P+ PF PP PP +PS P S++ + PA
Sbjct: 434 HLLQAPFSPPP----SPPVQAPFS-PPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPAS 488
Query: 1114 PNLHGHHHHLPFAPGTL---------PPPNLPVSMANPLHPNLP---------ATTTMPS 1155
P + P AP L PPP P ++A P LP A + +
Sbjct: 489 PPMSPSATPPPQAPPPLAAPPLQLAKPPPQAPPALATPPLQALPSPPASFPGQAPFSPSA 548
Query: 1156 SLPLGPGLGSAAAQSPAIVAAVQGNLLPSASPLPDPGTPLPPDPTAPSPGT--------- 1206
SLP+ P L + Q+P ++AA + P SP P P P P P T
Sbjct: 549 SLPMSP-LATPPPQAPPVLAAPLLQVPP--SPPASPTLQAPRRPPTPGPDTSVSGPRLTL 605
Query: 1207 -VTPVPPP 1213
+ P PPP
Sbjct: 606 ALAPGPPP 613
Score = 68.6 bits (166), Expect = 4e-11
Identities = 86/322 (26%), Positives = 112/322 (34%), Gaps = 79/322 (24%)
Query: 961 PPPALPPGSQPIPPTGAAGPPAVHGLAVAPASVVPAPAGSGAP----------------- 1003
P PA P ++P PPT GP A ++ P+PA P
Sbjct: 190 PRPA--PSARPRPPT--EGPRKSVSSASEHSTTEPSPAARRRPSAGGGLQRPASRSLSSS 245
Query: 1004 ------PGSLGPSEQIGQAGSTAGPQQQQPAGAPQ---PGAVPP---GVPPPGPHGPSPF 1051
P GPS + G + A P Q +P G P PP P GP SP
Sbjct: 246 ATPLSSPARSGPSAR-GTPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAPALGPLSSSPL 304
Query: 1052 PNQQTPPSMMPGAVPGSGHPGVAGNAPLGLPFGMPPPPPPPAPSIIPFGSLADSISINLP 1111
++ A P P ++ L P P PP+PS P S P
Sbjct: 305 ATPSPSAALQSQAPPTL--PATPHSSSLTCQLATPLPLAPPSPSAPPSLQTLPSPPATPP 362
Query: 1112 AP-------PNLHGHHHHLP---FAPGTLPPPNLPVSMANPLHPNLPATTTMPSSLPLGP 1161
+ P L H LP +P PPP P ++A P L A + P+S PL P
Sbjct: 363 SQATTSLGSPTLQATHSFLPSPPLSPLATPPPQAPPALALP---PLQAPPSPPASPPLSP 419
Query: 1162 GLGSAAAQSPAIVAA--------------VQGNLLPSASP---------------LPDPG 1192
L + + Q+P +A VQ P ASP L P
Sbjct: 420 -LATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAPP 478
Query: 1193 TPLPPDPTAPSPGTVTPVPPPQ 1214
+PP P A P + + PPPQ
Sbjct: 479 LQVPPSPPASPPMSPSATPPPQ 500
Score = 67.4 bits (163), Expect = 8e-11
Identities = 74/290 (25%), Positives = 94/290 (32%), Gaps = 56/290 (19%)
Query: 963 PALPPGSQPIPPTGAAGPPAVHGLAVAPASVVPAPAGSG-----------APPGSLGPSE 1011
P PP S P+ P+ A LA P V P+P S APP P
Sbjct: 451 PFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPL 510
Query: 1012 QIGQAGSTAGPQQQQPA--GAPQPGAVPPGVPPPGPHGPSPFPNQQTPPSMMPGAV---- 1065
Q+ + A P P P P A PG P P P TPP P +
Sbjct: 511 QLAKPPPQAPPALATPPLQALPSPPASFPGQAPFSPSASLPMSPLATPPPQAPPVLAAPL 570
Query: 1066 ------------------PGSGHPGVAGNAP---LGLPFGMPPPPPPPAPSIIPFGSLAD 1104
P + P + + P L L G PPPP S + LA
Sbjct: 571 LQVPPSPPASPTLQAPRRPPTPGPDTSVSGPRLTLALAPGPPPPPSRSPSSTLSGPDLAG 630
Query: 1105 SISINLPAPPNLHGHHHHLPFAPGTLPPPNLPVSMANPL------HPNLPATTTMPSSLP 1158
S P L G+ PPP+ ++ +P P L + LP
Sbjct: 631 HSSSATSTPEELRGYDSGPEGGAAASPPPDAELAACHPAAWSRGPAPPLAFRGAPGAPLP 690
Query: 1159 LGPGLGSAAAQSPAIVAAVQGNLLPSASPLPDPGTPLPP--DPTAPSPGT 1206
P G +A + +G P+ TP P DP PSPGT
Sbjct: 691 WPPATGPGSADGLCTIYETEG---------PESATPAPGALDP-GPSPGT 730
Score = 53.9 bits (128), Expect = 9e-07
Identities = 68/255 (26%), Positives = 92/255 (36%), Gaps = 24/255 (9%)
Query: 973 PPTGAAGPPAVHGLAVAPASV-VPAPAGSGAP-PGSLGPSEQIGQAGSTAGPQQQQPAGA 1030
P G P A V +P PA S P P + GP + + A S + PA
Sbjct: 167 PTPGTPSPAMARRSRAAGTEVGLPRPAPSARPRPPTEGPRKSVSSA-SEHSTTEPSPAAR 225
Query: 1031 PQPGAVPPGVPPPGPHGPSPFPNQQTPPSMMPGAVPGS----GHPGVAGNAPLGLPFGMP 1086
+P A G+ P S + P+ + G+ HP P GL P
Sbjct: 226 RRPSA-GGGLQRPASRSLSSSATPLSSPARSGPSARGTPRAPAHPSQP--KPKGLQALRP 282
Query: 1087 PPPPPP----APSIIPFGSL-----ADSISINLPAPPNLHGHHHHLPFAPGTLPPPNLPV 1137
P PP AP++ P S + S ++ APP L H P LP+
Sbjct: 283 PQVTPPRKDAAPALGPLSSSPLATPSPSAALQSQAPPTLPATPHSSSLTCQLATP--LPL 340
Query: 1138 SMANPLHPNLPATTTMPSSLPLGPGLGSAAAQSPAIVAAVQGNLLPSASPLPDPGTPLPP 1197
+ +P P P+ T+PS P + + SP + A P SPL P PP
Sbjct: 341 APPSPSAP--PSLQTLPSPPATPPSQATTSLGSPTLQATHSFLPSPPLSPLATPPPQAPP 398
Query: 1198 DPTAPSPGTVTPVPP 1212
P P P PP
Sbjct: 399 ALALP-PLQAPPSPP 412
Score = 45.8 bits (107), Expect = 2e-04
Identities = 73/295 (24%), Positives = 98/295 (33%), Gaps = 78/295 (26%)
Query: 978 AGPPAVHGLAVAPASVVPAPAGSGAPPGSLGPS--EQIGQAGSTAGPQQQQPAGAPQPGA 1035
AG A A AP + P P GS PP + P+ +G AG+ + AG
Sbjct: 10 AGAAARTPAARAPGLLTPRPPGSPRPPPPVTPAALRVLGAAGAVGRKPLAERAGGIGGAT 69
Query: 1036 VPPGVPPPGP--------HGPS-------------PFPNQQTPPSMMPGAVPGSGHPGVA 1074
+P P GP P+ P N P PG G+ PG
Sbjct: 70 IPESAPRAGPTRSAGTSSRNPASRPPASGRGERAPPAKNTSPGPVSSPGRASGTTRPGPL 129
Query: 1075 GNAPL----------GLPFGMP---------------PPPPPPAPSIIPFGSLADSISIN 1109
G L G P P P P+P++ S A +
Sbjct: 130 GQKGLRISAEETVARGKATEAPKRSALSAGARRDTSGPTPGTPSPAMAR-RSRAAGTEVG 188
Query: 1110 LPAP-PNLHGHHHHLPFAPGTLPPPNLPVSMANPLHPNLPATTTMPSSLPLGPGLGSAAA 1168
LP P P+ P P P ++ + + PA PS+ G GL A+
Sbjct: 189 LPRPAPSAR------PRPPTEGPRKSVSSASEHSTTEPSPAARRRPSA---GGGLQRPAS 239
Query: 1169 QSPAIVAAVQGNLLPSASPLPDP--------GTP-LPPDPTAPSPGTVTPVPPPQ 1214
+S L SA+PL P GTP P P+ P P + + PPQ
Sbjct: 240 RS----------LSSSATPLSSPARSGPSARGTPRAPAHPSQPKPKGLQALRPPQ 284
>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapiens]
Length = 816
Score = 77.4 bits (189), Expect = 8e-14
Identities = 91/331 (27%), Positives = 118/331 (35%), Gaps = 85/331 (25%)
Query: 960 QPPPALPPGSQPIPPTGAAGPPAVHGLAV----APASVVPAPAGSG--APPGSLGPSEQI 1013
Q PP+ PP S P+ P P A + LAV AP S P+P +PP S S
Sbjct: 367 QAPPS-PPASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSP-- 423
Query: 1014 GQAGSTAGPQQQQPAGAPQPGAVPPGVPPPGPHGPSPFPNQQTPPSMM------------ 1061
S P Q P+ A P VPP P P PS P Q PP +
Sbjct: 424 ----SATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQLAKPPPQ 479
Query: 1062 ----------------PGAVPGSGHPGVAGNAPLGLPFGMPPPPPPP---APSIIPFGSL 1102
P + PG + + P+ P PPP PP AP + S
Sbjct: 480 APPALATPPLQALPSPPASFPGQAPFSPSASLPMS-PLATPPPQAPPVLAAPLLQVPPSP 538
Query: 1103 ADSISINLPAPP-------NLHGHHHHLPFAPGTLPPPNLPVS--MANP-LHPNLPATTT 1152
S ++ P P ++ G L APG PPP+ S ++ P L + + T+
Sbjct: 539 PASPTLQAPRRPPTPGPDTSVSGPRLTLALAPGPPPPPSRSPSSTLSGPDLAGHSSSATS 598
Query: 1153 MPSSL---PLGPGLGSAAAQSPAIVAAVQGNLLPSASPLPD------PGTPLP------- 1196
P L GP G+AA+ P A S P P PG PLP
Sbjct: 599 TPEELRGYDSGPEGGAAASPPPDAELAACHPAAWSRGPAPPLAFRGAPGAPLPWPPATGP 658
Query: 1197 --------------PDPTAPSPGTVTPVPPP 1213
P+ P+PG + P P P
Sbjct: 659 GSADGLCTIYETEGPESATPAPGALDPGPSP 689
Score = 73.2 bits (178), Expect = 1e-12
Identities = 79/292 (27%), Positives = 107/292 (36%), Gaps = 49/292 (16%)
Query: 961 PPPALPPGSQPIPPTGAAGPPAVHGLAVAPASVVPAPAGSGAPPGSLGPSEQIGQAGSTA 1020
P PA P ++P PPT GP A ++ P+PA P G ++ S++
Sbjct: 181 PRPA--PSARPRPPT--EGPRKSVSSASEHSTTEPSPAARRRPSAGGGLQRPASRSLSSS 236
Query: 1021 GPQQQQPAGAPQPGAVPPGVPPPGPHGPSPFPN---QQTPPSMMPGAVPGSGHPGVAGNA 1077
PA + G G P H P P PP + P + G ++
Sbjct: 237 ATPLSSPA---RSGPSARGTPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAPALGPLSSS 293
Query: 1078 PLGLPFGMPPPPPPPAPSIIPFGS---LADSISINLPAPPNLHGHHHHLP---FAPGTLP 1131
PL P PP P PS+ S S + P L H LP +P P
Sbjct: 294 PLATPSPSAPPSPSAPPSLQTLPSPPATPPSQATTSLGSPTLQATHSFLPSPPLSPLATP 353
Query: 1132 PPNLPVSMANPLHPNLPATTTMPSSLPLGPGLGSAAAQSPAIVAA--------------V 1177
PP P ++A P L A + P+S PL P L + + Q+P +A V
Sbjct: 354 PPQAPPALALP---PLQAPPSPPASPPLSP-LATPSPQAPNALAVHLLQAPFSPPPSPPV 409
Query: 1178 QGNLLPSASP---------------LPDPGTPLPPDPTAPSPGTVTPVPPPQ 1214
Q P ASP L P +PP P A P + + PPPQ
Sbjct: 410 QAPFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQ 461
Score = 72.8 bits (177), Expect = 2e-12
Identities = 86/317 (27%), Positives = 113/317 (35%), Gaps = 71/317 (22%)
Query: 957 QQQQPPPALPPGSQPIPPTGAAGPPAVHGLAVAPASVVPAPAGSGA-----PPGSLGPSE 1011
Q +PP PP P A GP + LA S P+P+ + P + PS+
Sbjct: 269 QALRPPQVTPPRKDAAP---ALGPLSSSPLATPSPSAPPSPSAPPSLQTLPSPPATPPSQ 325
Query: 1012 QIGQAGSTA-------------GPQQQQPAGAPQPGAVPPGVPPPGPHGPSPFPNQQTPP 1058
GS P P AP A+PP PP P P TP
Sbjct: 326 ATTSLGSPTLQATHSFLPSPPLSPLATPPPQAPPALALPPLQAPPSPPASPPLSPLATPS 385
Query: 1059 SMMPGAV-------PGSGHPGVAGNAPLGLPFGMPPPPPPPAPSIIPFGSLADSISI--- 1108
P A+ P S P + P+ PF PP PP +PS P S++
Sbjct: 386 PQAPNALAVHLLQAPFSPPP----SPPVQAPFS-PPASPPVSPSATPPSQAPPSLAAPPL 440
Query: 1109 ----NLPAPPNLHGHHHHLPFAPGTL---------PPPNLPVSMANPLHPNLP------- 1148
+ PA P + P AP L PPP P ++A P LP
Sbjct: 441 QVPPSPPASPPMSPSATPPPQAPPPLAAPPLQLAKPPPQAPPALATPPLQALPSPPASFP 500
Query: 1149 --ATTTMPSSLPLGPGLGSAAAQSPAIVAAVQGNLLPSASPLPDPGTPLPPDPTAPSPGT 1206
A + +SLP+ P L + Q+P ++AA + P SP P P P P P T
Sbjct: 501 GQAPFSPSASLPMSP-LATPPPQAPPVLAAPLLQVPP--SPPASPTLQAPRRPPTPGPDT 557
Query: 1207 ----------VTPVPPP 1213
+ P PPP
Sbjct: 558 SVSGPRLTLALAPGPPP 574
Score = 67.4 bits (163), Expect = 8e-11
Identities = 74/290 (25%), Positives = 94/290 (32%), Gaps = 56/290 (19%)
Query: 963 PALPPGSQPIPPTGAAGPPAVHGLAVAPASVVPAPAGSG-----------APPGSLGPSE 1011
P PP S P+ P+ A LA P V P+P S APP P
Sbjct: 412 PFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPL 471
Query: 1012 QIGQAGSTAGPQQQQPA--GAPQPGAVPPGVPPPGPHGPSPFPNQQTPPSMMPGAV---- 1065
Q+ + A P P P P A PG P P P TPP P +
Sbjct: 472 QLAKPPPQAPPALATPPLQALPSPPASFPGQAPFSPSASLPMSPLATPPPQAPPVLAAPL 531
Query: 1066 ------------------PGSGHPGVAGNAP---LGLPFGMPPPPPPPAPSIIPFGSLAD 1104
P + P + + P L L G PPPP S + LA
Sbjct: 532 LQVPPSPPASPTLQAPRRPPTPGPDTSVSGPRLTLALAPGPPPPPSRSPSSTLSGPDLAG 591
Query: 1105 SISINLPAPPNLHGHHHHLPFAPGTLPPPNLPVSMANPL------HPNLPATTTMPSSLP 1158
S P L G+ PPP+ ++ +P P L + LP
Sbjct: 592 HSSSATSTPEELRGYDSGPEGGAAASPPPDAELAACHPAAWSRGPAPPLAFRGAPGAPLP 651
Query: 1159 LGPGLGSAAAQSPAIVAAVQGNLLPSASPLPDPGTPLPP--DPTAPSPGT 1206
P G +A + +G P+ TP P DP PSPGT
Sbjct: 652 WPPATGPGSADGLCTIYETEG---------PESATPAPGALDP-GPSPGT 691
Score = 50.1 bits (118), Expect = 1e-05
Identities = 73/286 (25%), Positives = 97/286 (33%), Gaps = 69/286 (24%)
Query: 978 AGPPAVHGLAVAPASVVPAPAGSGAPPGSLGPS--EQIGQAGSTAGPQQQQPAGAPQPGA 1035
AG A A AP + P P GS PP + P+ +G AG+ + AG
Sbjct: 10 AGAAARTPAARAPGLLTPRPPGSPRPPPPVTPAALRVLGAAGAVGRKPLAERAGGIGGAT 69
Query: 1036 VPPGVPPPGPHGPS------------PFPNQQTPPSMMPGAVPGSGHPGVAGNAPL---- 1079
+P P GP S P N P PG G+ PG G L
Sbjct: 70 IPESAPRAGPTRTSRPPASGRGERAPPAKNTSPGPVSSPGRASGTTRPGPLGQKGLRISA 129
Query: 1080 ------GLPFGMP---------------PPPPPPAPSIIPFGSLADSISINLPAP-PNLH 1117
G P P P P+P++ S A + LP P P+
Sbjct: 130 EETVARGKATEAPKRSALSAGARRDTSGPTPGTPSPAMAR-RSRAAGTEVGLPRPAPSAR 188
Query: 1118 GHHHHLPFAPGTLPPPNLPVSMANPLHPNLPATTTMPSSLPLGPGLGSAAAQSPAIVAAV 1177
P P P ++ + + PA PS+ G GL A++S
Sbjct: 189 ------PRPPTEGPRKSVSSASEHSTTEPSPAARRRPSA---GGGLQRPASRS------- 232
Query: 1178 QGNLLPSASPLPDP--------GTP-LPPDPTAPSPGTVTPVPPPQ 1214
L SA+PL P GTP P P+ P P + + PPQ
Sbjct: 233 ---LSSSATPLSSPARSGPSARGTPRAPAHPSQPKPKGLQALRPPQ 275
>gi|146134388 YLP motif containing 1 [Homo sapiens]
Length = 2146
Score = 76.6 bits (187), Expect = 1e-13
Identities = 110/444 (24%), Positives = 167/444 (37%), Gaps = 60/444 (13%)
Query: 789 KTSEAPKKDEEKGKEGDSEKESEKSDGDPIVDPEKEKEPKEGQEEVLKEVVESEGERKTK 848
K + P K+E ES S+ P+ P +E P EE E E + K +
Sbjct: 324 KDTPEPVKEEVTVPATSQVPESPSSEEPPLPPPNEEVPPPLPPEEPQSEDPEEDARLK-Q 382
Query: 849 VERDIGEGNLSTAAAAALAAAAVKAKHLAAVEE-RKIKSLVALLVETQMKKLEIKLRHFE 907
++ + KH + ++ + ++ Q ++++LRH+E
Sbjct: 383 LQAAAAHWQQHQQHRVGFQYQGIMQKHTQLQQILQQYQQIIQPPPHIQTMSVDMQLRHYE 442
Query: 908 ELETIMDREREALEYQRQQLLADRQAF---HMEQLKYAE---------MRARQQH----- 950
+ + E++R+ L + Q H +QL+ E M+A Q +
Sbjct: 443 MQQQQFQHLYQ--EWEREFQLWEEQLHSYPHKDQLQEYEKQWKTWQGHMKATQSYLQEKV 500
Query: 951 --FQQMHQQ----QQQPPPALPPGSQPIP-PTGAAG--PPAVHGLAVAPA--SVVPAPAG 999
FQ M Q PPP +P P P PT PP++ + PA + VP P
Sbjct: 501 NSFQNMKNQYMGNMSMPPPFVPYSQMPPPLPTMPPPVLPPSLPPPVMPPALPATVPPP-- 558
Query: 1000 SGAPPGSLGPS--EQIGQAG-----STAGPQQQQPAGAPQPGAVPPGVPPPGPHGPSPFP 1052
G PP + PS + G S+AGP P + PP +PPP +P P
Sbjct: 559 -GMPPPVMPPSLPTSVPPPGMPPSLSSAGPPPVLPPPSLSSAGPPPVLPPPSLSSTAPPP 617
Query: 1053 NQQTPPSMMPGAVPGSGHPGVAGNAPLGLPFGMPPPPPPPAPSIIPFGSLADSISINLPA 1112
PP PG PGV P G+P + P PPA S S S +P
Sbjct: 618 VMPLPPLSSATPPPGIPPPGV----PQGIPPQLTAAPVPPASS---------SQSSQVPE 664
Query: 1113 PPNLHGHHHHLPFA---PGTLPPPNLPVSMANPLHPNLP-ATTTMP-SSLPLGPGLGSAA 1167
P + F P T PP + ++ P + + +P SS GLG ++
Sbjct: 665 KPRPALLPTPVSFGSAPPTTYHPPLQSAGPSEQVNSKAPLSKSALPYSSFSSDQGLGESS 724
Query: 1168 AQSPAIVAAVQGNLLPSASPLPDP 1191
A + AV+ + S LPDP
Sbjct: 725 AAPSQPITAVKDMPVRSGGLLPDP 748
Score = 57.8 bits (138), Expect = 6e-08
Identities = 60/184 (32%), Positives = 73/184 (39%), Gaps = 49/184 (26%)
Query: 1031 PQPGAVPPGVPPPGPHGPSPFPNQQTPPSMMPGAVPGSGHPGVAGNAPLGLPFGMPPPPP 1090
P P +PPP P P P PP +MP A+P + P GMPPP
Sbjct: 517 PPPFVPYSQMPPPLPTMPPPVLPPSLPPPVMPPALPATVPPP-----------GMPPPVM 565
Query: 1091 PPA-PSIIPFGSLADSISINLPAPPNLHGHHHHLPFAPGTLPPPNLPVSMANPLHPNLPA 1149
PP+ P+ +P + S+S P P LPPP+L S A P P LP
Sbjct: 566 PPSLPTSVPPPGMPPSLSSAGPPP---------------VLPPPSL--SSAGP-PPVLP- 606
Query: 1150 TTTMPSSLPLGPGLGSAAAQSPAIVAAVQGNLLPSASPLPDPGTPLPPDPTA-PSPGTVT 1208
P SL S+ A P + L P +S P PG P P P P T
Sbjct: 607 ----PPSL-------SSTAPPPVM------PLPPLSSATPPPGIPPPGVPQGIPPQLTAA 649
Query: 1209 PVPP 1212
PVPP
Sbjct: 650 PVPP 653
Score = 55.1 bits (131), Expect = 4e-07
Identities = 74/270 (27%), Positives = 95/270 (35%), Gaps = 53/270 (19%)
Query: 946 ARQQHFQQMHQQQQQ---------PPPALPPGSQPIPPTGAAGPPAVHGLAVAPASVVPA 996
A+ Q QQMHQ+Q Q PPP PP P+ P G G P
Sbjct: 59 AQLQQLQQMHQKQMQCVLQPHHLPPPPLPPP---PVMPGGGYG------------DWQPP 103
Query: 997 PAGSGAPPG-SLGPSEQIGQAGSTAGPQQQQPAG-APQPGAVPPGVP--PPGPHGP---S 1049
P PPG +L +Q Q+ P G P PP P PPG + P S
Sbjct: 104 PPPMPPPPGPALSYQKQQQYKHQMLHHQRDGPPGLVPMELESPPESPPVPPGSYMPPSQS 163
Query: 1050 PFPNQQTPPSMMPGAVPGSGHPGVAGNAPLGLPFGMPPPPPPPAPSIIPFGSLADSISIN 1109
P Q PPS P P S P +PP P P+ S LA + S +
Sbjct: 164 YMPPPQPPPSYYP---PTSSQP------------YLPPAQPSPSQSPPSQSYLAPTPSYS 208
Query: 1110 LPAPPNLHGHHHHLPFAPGTLPPPNLPVSMANPLHPNLPATTTMPSSLPLGPGLGSAAAQ 1169
+ + H + P + P+ P + H P S P PG + Q
Sbjct: 209 SSSSSSQSYLSHSQSYLPSSQASPSRP----SQGHSKSQLLAPPPPSAP--PGNKTTVQQ 262
Query: 1170 SPAIVAAV-QGNLLPSASPLPDPGTPLPPD 1198
P A + A+P PDP T P +
Sbjct: 263 EPLESGAKNKSTEQQQAAPEPDPSTMTPQE 292
Score = 54.7 bits (130), Expect = 5e-07
Identities = 73/270 (27%), Positives = 101/270 (37%), Gaps = 44/270 (16%)
Query: 961 PPPALPPGSQPIPPTGAAGPPAVHGLAVAPASVVPAPAGSGAPPGSLGPSEQIGQAGSTA 1020
PPP +PP P A P A G + ++ AP+ SG Q+ Q
Sbjct: 15 PPPPVPP------PPPVALPEASPGPGYSSSTTPAAPSSSGFMSFREQHLAQLQQLQQMH 68
Query: 1021 GPQQQ---QPAGAPQPGAVPPGVPPPGPHGPSPFPNQQTPPSMMPGAVPGSGHPGVAGNA 1077
Q Q QP P P PP V P G +G + Q PP MP PG P ++
Sbjct: 69 QKQMQCVLQPHHLPPPPLPPPPVMPGGGYG-----DWQPPPPPMP-PPPG---PALSYQK 119
Query: 1078 PLGLPFGMPPPPPPPAPSIIPFGSLADSISINLPAPPNLHGHHHHLPFAPGTLPPPNLPV 1137
M P ++P +S + P PP ++P + +PPP P
Sbjct: 120 QQQYKHQMLHHQRDGPPGLVPME--LESPPESPPVPPG-----SYMPPSQSYMPPPQPPP 172
Query: 1138 SMANPL--HPNLPATTTMPSSLPLG-------PGLGSAAAQSPAIVAAVQGNLLPSASPL 1188
S P P LP PS P P S+++ S + ++ Q + LPS+
Sbjct: 173 SYYPPTSSQPYLPPAQPSPSQSPPSQSYLAPTPSYSSSSSSSQSYLSHSQ-SYLPSSQAS 231
Query: 1189 PDPGTP--------LPPDPTAPSPGTVTPV 1210
P + PP P+AP PG T V
Sbjct: 232 PSRPSQGHSKSQLLAPPPPSAP-PGNKTTV 260
Score = 50.8 bits (120), Expect = 8e-06
Identities = 48/155 (30%), Positives = 65/155 (41%), Gaps = 39/155 (25%)
Query: 1075 GNAPLGLPF----GMPPPPPPPAPSIIPFGSLADSISINLPAPPNLHGHHHHLPFAPGTL 1130
GN + PF MPPP P P ++P S+ P P P P T+
Sbjct: 512 GNMSMPPPFVPYSQMPPPLPTMPPPVLP-------PSLPPPVMP---------PALPATV 555
Query: 1131 PPPNLPVSMANPLHPNLPATTTMPSSLPLGPGLGSAAAQS----PAIVAAVQGNLLPS-- 1184
PPP +P + + P+LP T+ P +P P L SA P++ +A +LP
Sbjct: 556 PPPGMPPPV---MPPSLP-TSVPPPGMP--PSLSSAGPPPVLPPPSLSSAGPPPVLPPPS 609
Query: 1185 -ASPLPDPGTPLP------PDPTAPSPGTVTPVPP 1212
+S P P PLP P P P PG +PP
Sbjct: 610 LSSTAPPPVMPLPPLSSATPPPGIPPPGVPQGIPP 644
Score = 43.9 bits (102), Expect = 0.001
Identities = 35/127 (27%), Positives = 56/127 (44%), Gaps = 7/127 (5%)
Query: 1038 PGV-PPPGPHGPSPFPNQQTPPSMMPGAVPGSGHPGVAGNAPLGLPFGMPPPPPPPAPSI 1096
PG+ PPPG + P P P + P S++ + P + P+ +P PPPP PP P +
Sbjct: 1503 PGMYPPPGSYRPPP-PMGKPPGSIVRPSAPPARSSVPVTRPPVPIPPPPPPPPLPPPPPV 1561
Query: 1097 I-PFGSLADSISINLPAPPNLHGHHH----HLPFAPGTLPPPNLPVSMANPLHPNLPATT 1151
I P S + + + L + + F T P+ PV P+H ++P
Sbjct: 1562 IKPQTSAVEQERWDEDSFYGLWDTNDEQGLNSEFKSETAAIPSAPVLPPPPVHSSIPPPG 1621
Query: 1152 TMPSSLP 1158
+P +P
Sbjct: 1622 PVPMGMP 1628
Score = 40.8 bits (94), Expect = 0.008
Identities = 46/186 (24%), Positives = 56/186 (30%), Gaps = 40/186 (21%)
Query: 1037 PPGVPPPGPHGPSPFPNQQTPPSMMPGAVPGSGHPGVAGNAPLGLPFGMPPPPPPPAPSI 1096
PP VPPP PP +P A PG G+ P APS
Sbjct: 16 PPPVPPP-------------PPVALPEASPGPGYSSST---------------TPAAPSS 47
Query: 1097 IPFGSLADSISINLPAPPNLHGHHHHLPFAPGTLPPPNLPVSMANPLHPNLPATTTMPSS 1156
F S + L +H P LPPP LP P+ P P
Sbjct: 48 SGFMSFREQHLAQLQQLQQMHQKQMQCVLQPHHLPPPPLPPP---PVMPGGGYGDWQPPP 104
Query: 1157 LPLGPGLGSAAAQSPAIVAAVQ---------GNLLPSASPLPDPGTPLPPDPTAPSPGTV 1207
P+ P G A + Q L+P P P+PP P +
Sbjct: 105 PPMPPPPGPALSYQKQQQYKHQMLHHQRDGPPGLVPMELESPPESPPVPPGSYMPPSQSY 164
Query: 1208 TPVPPP 1213
P P P
Sbjct: 165 MPPPQP 170
Score = 38.1 bits (87), Expect = 0.051
Identities = 50/227 (22%), Positives = 85/227 (37%), Gaps = 45/227 (19%)
Query: 900 EIKLRHFEELETIMDREREALEYQRQQLLADRQAFHM--EQLKYAEMRARQQHFQQMHQQ 957
EI L+ +EL+ + + ++E L+ + + A H+ ++ + +R +
Sbjct: 1454 EIILKAAQELKMLRE-QKEQLQKMKDFGSEPQMADHLPPQESRLQNTSSRPGMYPPPGSY 1512
Query: 958 QQQPPPALPPGSQPIPPTGAAGPPAVHGLAVAPASVVPAPAGSGAPPGSLGPSEQIGQAG 1017
+ PP PPGS P + PPA + P + P P PP L P + +
Sbjct: 1513 RPPPPMGKPPGSIVRP----SAPPARSSV---PVTRPPVPIPPPPPPPPLPPPPPVIKPQ 1565
Query: 1018 STAGPQQQ------------------------QPAGAPQPGAVPP-----GVPPPGPHGP 1048
++A Q++ + A P +PP +PPPGP P
Sbjct: 1566 TSAVEQERWDEDSFYGLWDTNDEQGLNSEFKSETAAIPSAPVLPPPPVHSSIPPPGP-VP 1624
Query: 1049 SPFPNQQTPPSMMPGAVPGSGHPGVAGNAPLGLPFG----MPPPPPP 1091
P PP + G G ++ N +P+G + P P P
Sbjct: 1625 MGMPPMSKPPPVQQTVDYGHGR-DISTNKVEQIPYGERITLRPDPLP 1670
Score = 32.0 bits (71), Expect = 3.7
Identities = 30/98 (30%), Positives = 38/98 (38%), Gaps = 5/98 (5%)
Query: 1118 GHHHHLPFAPGTLPPPNLPVSMANPLHPNLPATTT--MPSSLPLGPGLGSAAAQSPAIVA 1175
G H+ P P PPP + + A+P P ++TT PSS AQ +
Sbjct: 10 GSSHYPP--PPVPPPPPVALPEASP-GPGYSSSTTPAAPSSSGFMSFREQHLAQLQQLQQ 66
Query: 1176 AVQGNLLPSASPLPDPGTPLPPDPTAPSPGTVTPVPPP 1213
Q + P P PLPP P P G PPP
Sbjct: 67 MHQKQMQCVLQPHHLPPPPLPPPPVMPGGGYGDWQPPP 104
>gi|55750053 atrophin-1 [Homo sapiens]
Length = 1190
Score = 76.3 bits (186), Expect = 2e-13
Identities = 83/300 (27%), Positives = 109/300 (36%), Gaps = 48/300 (16%)
Query: 935 HMEQLKYAEMRARQQHFQQMHQQQQQPPPALPPGSQPIPPTGAAGPPAVHGLAVAPA--S 992
H +Q + + + +QQ QQ H PPP PG+ P P G + A H A++P+ S
Sbjct: 483 HQQQQQQQQQQQQQQQQQQQHHGNSGPPP---PGAFPHPLEGGSSHHA-HPYAMSPSLGS 538
Query: 993 VVPAPAGSGAPP-----------GSLGPSEQIGQAGSTAGPQQQQPAGAPQPGAVPPGVP 1041
+ P P G P G GP S++ Q P P P P G P
Sbjct: 539 LRPYPPGPAHLPPPHSQVSYSQAGPNGPPVSSSSNSSSSTSQGSYPCSHPSPSQGPQGAP 598
Query: 1042 PPGPHGPSPFPNQQTPPSMMPGAVPGSGHPGVAGNAPLGLPFGMPPPPPP-----PAPSI 1096
P P P P T + + + ++P G PP PPP P+P
Sbjct: 599 YPFP----PVPTVTTSSATLSTVI------ATVASSPAGYKTASPPGPPPYGKRAPSPGA 648
Query: 1097 I-----PFGSLADSISINLPAPPNLHGHHHHLPFAPGTLPPPNLPVSMANPLHPNLPATT 1151
P S PP G P PGT P + P PL P
Sbjct: 649 YKTATPPGYKPGSPPSFRTGTPPGYRGTSP--PAGPGTFKPGS-PTVGPGPLPP------ 699
Query: 1152 TMPSSLPLGPGLGSAAAQSPAIVAAVQGNLLPSASPLPDPGTPLPPDPTAPSPGTVTPVP 1211
PS LP P +A A P + +A Q P A P +P+PP + P V VP
Sbjct: 700 AGPSGLPSLPPPPAAPASGPPL-SATQIKQEP-AEEYETPESPVPPARSPSPPPKVVDVP 757
Score = 68.2 bits (165), Expect = 5e-11
Identities = 74/247 (29%), Positives = 93/247 (37%), Gaps = 35/247 (14%)
Query: 961 PPPALPPGSQPIPPTGAAGP-PAVHGLAVAPASVVPAPAGSGAPPGSLGPSEQIGQAGST 1019
PP PP S P P + P P+V P APPG+ P Q+ G T
Sbjct: 166 PPSPQPPDSTPRQPEASFEPHPSVTPTGYHAPMEPPTSRMFQAPPGAPPPHPQL-YPGGT 224
Query: 1020 AGPQQQQPAGAPQPGAVPPGVPPPGPHGPSPFPNQQTPPSMMPGAVPGSGHPGVAGNAPL 1079
G P G P+ G V GP+G +Q PP P +V SG G P
Sbjct: 225 GGVLSGPPMG-PKGGGAASSVG--GPNG-----GKQHPPPTTPISVSSSGASGAPPTKPP 276
Query: 1080 GLPFGMPPPPPPPAPSIIPFGSLADSISINLPAPPNLHGHHHHLPFAPGTLPPPNLPVSM 1139
P G P P P+ P ++ NLP PP L P + PP L
Sbjct: 277 TTPVGGGNLPSAPPPANFPH------VTPNLPPPPALR------PLNNASASPPGLG--- 321
Query: 1140 ANPLHPNLPATTTMPSS---LPLGPGLGSAAAQSPAIVAAVQGNLLPSASPLPDPGTPLP 1196
A PL +LP+ M LP GP G A SP +L P++S P P P
Sbjct: 322 AQPLPGHLPSPHAMGQGMGGLPPGPEKGPTLAPSPH-------SLPPASSSAPAPPMRFP 374
Query: 1197 PDPTAPS 1203
++ S
Sbjct: 375 YSSSSSS 381
Score = 65.5 bits (158), Expect = 3e-10
Identities = 68/273 (24%), Positives = 96/273 (35%), Gaps = 23/273 (8%)
Query: 960 QPPPALPPGSQPIPPTGAAG---PPAVHGLAVAPASVVPAPAGSGAPPGSLGPSEQIGQA 1016
Q PP PP + P G G P + AS V P G P P + +
Sbjct: 207 QAPPGAPPPHPQLYPGGTGGVLSGPPMGPKGGGAASSVGGPNGGKQHPPPTTPI-SVSSS 265
Query: 1017 GSTAGPQQQQPAGAPQPGAVPPGVPPPGPHGPSPFPNQQTPPSMMP-----GAVPGSGHP 1071
G++ P + P P G P PPP + P PN PP++ P + PG G
Sbjct: 266 GASGAPPTKPPT-TPVGGGNLPSAPPPA-NFPHVTPNLPPPPALRPLNNASASPPGLGAQ 323
Query: 1072 GVAGNAP----LGLPFGMPPPPPPPAPSIIPFGSLADSISINLPAPPNLHGHHHHLPFAP 1127
+ G+ P +G G PP P P++ P S + PAPP + +
Sbjct: 324 PLPGHLPSPHAMGQGMGGLPPGPEKGPTLAPSPHSLPPASSSAPAPPMRFPYSSSSSSSA 383
Query: 1128 GTLPPPNLPVSMANPLHPNLPATTTMPSSLPLGPGLGSAAAQSPAIVAAVQGNLLPSASP 1187
+ S A+P P A + P S P L + ++ + S P
Sbjct: 384 AASSSSSSSSSSASPF-PASQALPSYPHSFPPPTSLSVSNQPPKYTQPSLPSQAVWSQGP 442
Query: 1188 LPDP-------GTPLPPDPTAPSPGTVTPVPPP 1213
P P + P P PS G + PP
Sbjct: 443 PPPPPYGRLLANSNAHPGPFPPSTGAQSTAHPP 475
Score = 51.6 bits (122), Expect = 4e-06
Identities = 76/327 (23%), Positives = 106/327 (32%), Gaps = 102/327 (31%)
Query: 962 PPALPPGSQ--PIPP-------TGAAGPPAVHGLAVAPASVVPAPAGSGAP--PGSLGPS 1010
P +LPP S P PP + ++ A + + +S P PA P P S P
Sbjct: 356 PHSLPPASSSAPAPPMRFPYSSSSSSSAAASSSSSSSSSSASPFPASQALPSYPHSFPPP 415
Query: 1011 EQIGQAGSTAGPQQQQPAGAPQPGAVPPGVPPPGPHG---------PSPFP--------- 1052
+ S P+ QP+ P G PPP P+G P PFP
Sbjct: 416 TSLSV--SNQPPKYTQPS-LPSQAVWSQGPPPPPPYGRLLANSNAHPGPFPPSTGAQSTA 472
Query: 1053 ---------------------------------NQQTPPSMMPGAVPGSGHPGVAGNAPL 1079
N PP PGA P HP G++
Sbjct: 473 HPPVSTHHHHHQQQQQQQQQQQQQQQQQQQHHGNSGPPP---PGAFP---HPLEGGSSHH 526
Query: 1080 GLPFGMPPP-----PPPPAPSIIPFGSLADSISINLPAPPNLHGHHHHLPFAPGTLPPPN 1134
P+ M P P PP P+ +P PP H + P P +
Sbjct: 527 AHPYAMSPSLGSLRPYPPGPAHLP--------------PP--HSQVSYSQAGPNGPPVSS 570
Query: 1135 LPVSMANPLHPNLPATTTMPSSLPLG--------PGLGSAAAQSPAIVAAVQGNLLPSAS 1186
S ++ + P + PS P G P + +++A ++A V + P+
Sbjct: 571 SSNSSSSTSQGSYPCSHPSPSQGPQGAPYPFPPVPTVTTSSATLSTVIATVASS--PAGY 628
Query: 1187 PLPDPGTPLPPDPTAPSPGTVTPVPPP 1213
P P P APSPG PP
Sbjct: 629 KTASPPGPPPYGKRAPSPGAYKTATPP 655
Score = 50.8 bits (120), Expect = 8e-06
Identities = 60/226 (26%), Positives = 78/226 (34%), Gaps = 26/226 (11%)
Query: 1004 PGSLGPSEQIGQAGSTAGPQQQQPAGAPQPGAVPPGVPPPGPHGPSPFPNQQTPPSMMPG 1063
P P + S++G Q P PP PP P + + PS+ P
Sbjct: 133 PSIYSPGSVENDSDSSSGLSQGPARPYHPPPLFPPSPQPPDSTPRQPEASFEPHPSVTPT 192
Query: 1064 AVPGSGHPGVAGNAPLGLPFGMPPPPPPPAPSIIPFGSLADSISINLPAPPNLHGHHHHL 1123
P P F PP PPP P + P G+ + P P G +
Sbjct: 193 GYHAPMEP------PTSRMFQAPPGAPPPHPQLYPGGT--GGVLSGPPMGPKGGGAASSV 244
Query: 1124 --PFAPGTLPPPNLPVSMANPLHPNLPATTTMPSSLPLGPGLGSAAAQSPAIVAAVQGNL 1181
P PPP P+S+++ P T P + P+G G +A PA V NL
Sbjct: 245 GGPNGGKQHPPPTTPISVSSSGASGAP--PTKPPTTPVGGG-NLPSAPPPANFPHVTPNL 301
Query: 1182 LP----------SASPLPDPGTPLP---PDPTAPSPGTVTPVPPPQ 1214
P SASP PLP P P A G P P+
Sbjct: 302 PPPPALRPLNNASASPPGLGAQPLPGHLPSPHAMGQGMGGLPPGPE 347
Score = 30.8 bits (68), Expect = 8.2
Identities = 24/90 (26%), Positives = 40/90 (44%), Gaps = 15/90 (16%)
Query: 769 KKEPKEPREGGGAIEEEAKEKTSEAPKKDEEKGKEGDSEKESEKSDGDPIVDPEKEKEPK 828
KKE PRE E + + +P +G +EK + + + + K K
Sbjct: 17 KKEAPGPRE-------ELRSRGRASPGGVSTSSSDGKAEKSRQTAKKARVEEASTPKVNK 69
Query: 829 EGQEEVLKEVVESEGE-----RKTKVERDI 853
+G+ E E+ ESE E +KTK E+++
Sbjct: 70 QGRSE---EISESESEETNAPKKTKTEQEL 96
Score = 30.8 bits (68), Expect = 8.2
Identities = 27/88 (30%), Positives = 37/88 (42%), Gaps = 7/88 (7%)
Query: 962 PPALPPGSQPIPPTGAAGPPAVHGLAVAPASVVPAPAGSGAPPGSLGPSEQIGQAGSTAG 1021
PPA P +P PT GP G + P+ P A + PP S + QI Q +
Sbjct: 678 PPAGPGTFKPGSPTVGPGPLPPAGPSGLPSLPPPPAAPASGPPLS---ATQIKQEPA--- 731
Query: 1022 PQQQQPAGAPQPGAVPPGVPPPGPHGPS 1049
++ + +P P A P PP PS
Sbjct: 732 -EEYETPESPVPPARSPSPPPKVVDVPS 758
>gi|55750041 atrophin-1 [Homo sapiens]
Length = 1190
Score = 76.3 bits (186), Expect = 2e-13
Identities = 83/300 (27%), Positives = 109/300 (36%), Gaps = 48/300 (16%)
Query: 935 HMEQLKYAEMRARQQHFQQMHQQQQQPPPALPPGSQPIPPTGAAGPPAVHGLAVAPA--S 992
H +Q + + + +QQ QQ H PPP PG+ P P G + A H A++P+ S
Sbjct: 483 HQQQQQQQQQQQQQQQQQQQHHGNSGPPP---PGAFPHPLEGGSSHHA-HPYAMSPSLGS 538
Query: 993 VVPAPAGSGAPP-----------GSLGPSEQIGQAGSTAGPQQQQPAGAPQPGAVPPGVP 1041
+ P P G P G GP S++ Q P P P P G P
Sbjct: 539 LRPYPPGPAHLPPPHSQVSYSQAGPNGPPVSSSSNSSSSTSQGSYPCSHPSPSQGPQGAP 598
Query: 1042 PPGPHGPSPFPNQQTPPSMMPGAVPGSGHPGVAGNAPLGLPFGMPPPPPP-----PAPSI 1096
P P P P T + + + ++P G PP PPP P+P
Sbjct: 599 YPFP----PVPTVTTSSATLSTVI------ATVASSPAGYKTASPPGPPPYGKRAPSPGA 648
Query: 1097 I-----PFGSLADSISINLPAPPNLHGHHHHLPFAPGTLPPPNLPVSMANPLHPNLPATT 1151
P S PP G P PGT P + P PL P
Sbjct: 649 YKTATPPGYKPGSPPSFRTGTPPGYRGTSP--PAGPGTFKPGS-PTVGPGPLPP------ 699
Query: 1152 TMPSSLPLGPGLGSAAAQSPAIVAAVQGNLLPSASPLPDPGTPLPPDPTAPSPGTVTPVP 1211
PS LP P +A A P + +A Q P A P +P+PP + P V VP
Sbjct: 700 AGPSGLPSLPPPPAAPASGPPL-SATQIKQEP-AEEYETPESPVPPARSPSPPPKVVDVP 757
Score = 68.2 bits (165), Expect = 5e-11
Identities = 74/247 (29%), Positives = 93/247 (37%), Gaps = 35/247 (14%)
Query: 961 PPPALPPGSQPIPPTGAAGP-PAVHGLAVAPASVVPAPAGSGAPPGSLGPSEQIGQAGST 1019
PP PP S P P + P P+V P APPG+ P Q+ G T
Sbjct: 166 PPSPQPPDSTPRQPEASFEPHPSVTPTGYHAPMEPPTSRMFQAPPGAPPPHPQL-YPGGT 224
Query: 1020 AGPQQQQPAGAPQPGAVPPGVPPPGPHGPSPFPNQQTPPSMMPGAVPGSGHPGVAGNAPL 1079
G P G P+ G V GP+G +Q PP P +V SG G P
Sbjct: 225 GGVLSGPPMG-PKGGGAASSVG--GPNG-----GKQHPPPTTPISVSSSGASGAPPTKPP 276
Query: 1080 GLPFGMPPPPPPPAPSIIPFGSLADSISINLPAPPNLHGHHHHLPFAPGTLPPPNLPVSM 1139
P G P P P+ P ++ NLP PP L P + PP L
Sbjct: 277 TTPVGGGNLPSAPPPANFPH------VTPNLPPPPALR------PLNNASASPPGLG--- 321
Query: 1140 ANPLHPNLPATTTMPSS---LPLGPGLGSAAAQSPAIVAAVQGNLLPSASPLPDPGTPLP 1196
A PL +LP+ M LP GP G A SP +L P++S P P P
Sbjct: 322 AQPLPGHLPSPHAMGQGMGGLPPGPEKGPTLAPSPH-------SLPPASSSAPAPPMRFP 374
Query: 1197 PDPTAPS 1203
++ S
Sbjct: 375 YSSSSSS 381
Score = 65.5 bits (158), Expect = 3e-10
Identities = 68/273 (24%), Positives = 96/273 (35%), Gaps = 23/273 (8%)
Query: 960 QPPPALPPGSQPIPPTGAAG---PPAVHGLAVAPASVVPAPAGSGAPPGSLGPSEQIGQA 1016
Q PP PP + P G G P + AS V P G P P + +
Sbjct: 207 QAPPGAPPPHPQLYPGGTGGVLSGPPMGPKGGGAASSVGGPNGGKQHPPPTTPI-SVSSS 265
Query: 1017 GSTAGPQQQQPAGAPQPGAVPPGVPPPGPHGPSPFPNQQTPPSMMP-----GAVPGSGHP 1071
G++ P + P P G P PPP + P PN PP++ P + PG G
Sbjct: 266 GASGAPPTKPPT-TPVGGGNLPSAPPPA-NFPHVTPNLPPPPALRPLNNASASPPGLGAQ 323
Query: 1072 GVAGNAP----LGLPFGMPPPPPPPAPSIIPFGSLADSISINLPAPPNLHGHHHHLPFAP 1127
+ G+ P +G G PP P P++ P S + PAPP + +
Sbjct: 324 PLPGHLPSPHAMGQGMGGLPPGPEKGPTLAPSPHSLPPASSSAPAPPMRFPYSSSSSSSA 383
Query: 1128 GTLPPPNLPVSMANPLHPNLPATTTMPSSLPLGPGLGSAAAQSPAIVAAVQGNLLPSASP 1187
+ S A+P P A + P S P L + ++ + S P
Sbjct: 384 AASSSSSSSSSSASPF-PASQALPSYPHSFPPPTSLSVSNQPPKYTQPSLPSQAVWSQGP 442
Query: 1188 LPDP-------GTPLPPDPTAPSPGTVTPVPPP 1213
P P + P P PS G + PP
Sbjct: 443 PPPPPYGRLLANSNAHPGPFPPSTGAQSTAHPP 475
Score = 51.6 bits (122), Expect = 4e-06
Identities = 76/327 (23%), Positives = 106/327 (32%), Gaps = 102/327 (31%)
Query: 962 PPALPPGSQ--PIPP-------TGAAGPPAVHGLAVAPASVVPAPAGSGAP--PGSLGPS 1010
P +LPP S P PP + ++ A + + +S P PA P P S P
Sbjct: 356 PHSLPPASSSAPAPPMRFPYSSSSSSSAAASSSSSSSSSSASPFPASQALPSYPHSFPPP 415
Query: 1011 EQIGQAGSTAGPQQQQPAGAPQPGAVPPGVPPPGPHG---------PSPFP--------- 1052
+ S P+ QP+ P G PPP P+G P PFP
Sbjct: 416 TSLSV--SNQPPKYTQPS-LPSQAVWSQGPPPPPPYGRLLANSNAHPGPFPPSTGAQSTA 472
Query: 1053 ---------------------------------NQQTPPSMMPGAVPGSGHPGVAGNAPL 1079
N PP PGA P HP G++
Sbjct: 473 HPPVSTHHHHHQQQQQQQQQQQQQQQQQQQHHGNSGPPP---PGAFP---HPLEGGSSHH 526
Query: 1080 GLPFGMPPP-----PPPPAPSIIPFGSLADSISINLPAPPNLHGHHHHLPFAPGTLPPPN 1134
P+ M P P PP P+ +P PP H + P P +
Sbjct: 527 AHPYAMSPSLGSLRPYPPGPAHLP--------------PP--HSQVSYSQAGPNGPPVSS 570
Query: 1135 LPVSMANPLHPNLPATTTMPSSLPLG--------PGLGSAAAQSPAIVAAVQGNLLPSAS 1186
S ++ + P + PS P G P + +++A ++A V + P+
Sbjct: 571 SSNSSSSTSQGSYPCSHPSPSQGPQGAPYPFPPVPTVTTSSATLSTVIATVASS--PAGY 628
Query: 1187 PLPDPGTPLPPDPTAPSPGTVTPVPPP 1213
P P P APSPG PP
Sbjct: 629 KTASPPGPPPYGKRAPSPGAYKTATPP 655
Score = 50.8 bits (120), Expect = 8e-06
Identities = 60/226 (26%), Positives = 78/226 (34%), Gaps = 26/226 (11%)
Query: 1004 PGSLGPSEQIGQAGSTAGPQQQQPAGAPQPGAVPPGVPPPGPHGPSPFPNQQTPPSMMPG 1063
P P + S++G Q P PP PP P + + PS+ P
Sbjct: 133 PSIYSPGSVENDSDSSSGLSQGPARPYHPPPLFPPSPQPPDSTPRQPEASFEPHPSVTPT 192
Query: 1064 AVPGSGHPGVAGNAPLGLPFGMPPPPPPPAPSIIPFGSLADSISINLPAPPNLHGHHHHL 1123
P P F PP PPP P + P G+ + P P G +
Sbjct: 193 GYHAPMEP------PTSRMFQAPPGAPPPHPQLYPGGT--GGVLSGPPMGPKGGGAASSV 244
Query: 1124 --PFAPGTLPPPNLPVSMANPLHPNLPATTTMPSSLPLGPGLGSAAAQSPAIVAAVQGNL 1181
P PPP P+S+++ P T P + P+G G +A PA V NL
Sbjct: 245 GGPNGGKQHPPPTTPISVSSSGASGAP--PTKPPTTPVGGG-NLPSAPPPANFPHVTPNL 301
Query: 1182 LP----------SASPLPDPGTPLP---PDPTAPSPGTVTPVPPPQ 1214
P SASP PLP P P A G P P+
Sbjct: 302 PPPPALRPLNNASASPPGLGAQPLPGHLPSPHAMGQGMGGLPPGPE 347
Score = 30.8 bits (68), Expect = 8.2
Identities = 24/90 (26%), Positives = 40/90 (44%), Gaps = 15/90 (16%)
Query: 769 KKEPKEPREGGGAIEEEAKEKTSEAPKKDEEKGKEGDSEKESEKSDGDPIVDPEKEKEPK 828
KKE PRE E + + +P +G +EK + + + + K K
Sbjct: 17 KKEAPGPRE-------ELRSRGRASPGGVSTSSSDGKAEKSRQTAKKARVEEASTPKVNK 69
Query: 829 EGQEEVLKEVVESEGE-----RKTKVERDI 853
+G+ E E+ ESE E +KTK E+++
Sbjct: 70 QGRSE---EISESESEETNAPKKTKTEQEL 96
Score = 30.8 bits (68), Expect = 8.2
Identities = 27/88 (30%), Positives = 37/88 (42%), Gaps = 7/88 (7%)
Query: 962 PPALPPGSQPIPPTGAAGPPAVHGLAVAPASVVPAPAGSGAPPGSLGPSEQIGQAGSTAG 1021
PPA P +P PT GP G + P+ P A + PP S + QI Q +
Sbjct: 678 PPAGPGTFKPGSPTVGPGPLPPAGPSGLPSLPPPPAAPASGPPLS---ATQIKQEPA--- 731
Query: 1022 PQQQQPAGAPQPGAVPPGVPPPGPHGPS 1049
++ + +P P A P PP PS
Sbjct: 732 -EEYETPESPVPPARSPSPPPKVVDVPS 758
>gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens]
Length = 416
Score = 76.3 bits (186), Expect = 2e-13
Identities = 87/288 (30%), Positives = 97/288 (33%), Gaps = 35/288 (12%)
Query: 957 QQQQPPPALPPGSQPIPPTGAAGPPAVHGLAVAPASVVPAPAGSGAPPGS-LGPSEQIGQ 1015
Q PPP P G P GPP G P +PPG GP Q G
Sbjct: 69 QGPPPPPGKPQGPPPQGGNKPQGPPP-PGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGN 127
Query: 1016 AGSTAGPQQQQPAG-APQPGAVPPGVPPPG-PHGPSP-----FPNQQTPPSMMPGAVPGS 1068
P +P G PQ G P G PPPG P GP P + ++PP G P
Sbjct: 128 QPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDNKSRSSRSPPGKPQGPPPQG 187
Query: 1069 GHPGVAGNAPLGLPFGMPP--------PPPPPAPSIIPFGSLADSISINLP-----APPN 1115
G+ P G P G PP PPPP P P S S P PP
Sbjct: 188 GNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDNKSQSARSPPGKPQGPPP 247
Query: 1116 LHGHHHHLPFAPGTLPPPNLPVSMANPLHPNLPATTTMPSSLPLGPGLGSAAAQSP---A 1172
G+ P P P P P P P P P G S +++SP
Sbjct: 248 QGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPG---KPQGPPPQGGSKSRSSRSPPGKP 304
Query: 1173 IVAAVQGNLLPSASPLPDPGTPLPP------DPTAPSPGTVTPVPPPQ 1214
QG P P P PG P P P P P PPPQ
Sbjct: 305 QGPPPQGGNQPQGPP-PPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQ 351
Score = 70.9 bits (172), Expect = 7e-12
Identities = 86/276 (31%), Positives = 93/276 (33%), Gaps = 40/276 (14%)
Query: 969 SQPIPPTGAAGPPAVHGLAVAPASVVPAPAGSGAPPGS-LGPSEQIGQAGSTAGPQQQQP 1027
SQ P+ AG P AP P G +PPG GP Q G P +P
Sbjct: 24 SQEESPSLIAGNPQG-----APPQGGNKPQGPPSPPGKPQGPPPQGGNQPQGPPPPPGKP 78
Query: 1028 AGAP-QPGAVPPGVPPPG-PHGPSPFPNQQTPPSMMPGAVPGSGHPGVAGNAPL------ 1079
G P Q G P G PPPG P GP P ++ P PG G P GN P
Sbjct: 79 QGPPPQGGNKPQGPPPPGKPQGPPPQGDKSRSPRSPPGKPQGP--PPQGGNQPQGPPPPP 136
Query: 1080 GLPFGMPP--------PPPPPAPSIIPFGSLADSISINLP-----APPNLHGHHHHLPFA 1126
G P G PP PPPP P P S S P PP G+ P
Sbjct: 137 GKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDNKSRSSRSPPGKPQGPPPQGGNQPQGPPP 196
Query: 1127 PGTLPPPNLPVSMANPLHPNLPATTTMPSSLPLGPGLGSAAAQSPAIVAA--VQGNLLPS 1184
P P P P P P P P G +A P QG P
Sbjct: 197 PPGKPQGPPPQGGNKPQGPPPPGKPQGPP--PQGDNKSQSARSPPGKPQGPPPQGGNQPQ 254
Query: 1185 ASPLPDPGTPLPP------DPTAPSPGTVTPVPPPQ 1214
P P PG P P P P P PPPQ
Sbjct: 255 GPP-PPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQ 289
Score = 66.6 bits (161), Expect = 1e-10
Identities = 78/263 (29%), Positives = 84/263 (31%), Gaps = 49/263 (18%)
Query: 959 QQPPP--ALPPGSQPIPPTGAAGPPAVHGLAVAPASVVPAPAGSGAPPGSLGPSEQI-GQ 1015
Q PPP P P PP GPP G P P G PP S+
Sbjct: 181 QGPPPQGGNQPQGPPPPPGKPQGPPPQGGNK--PQGPPPPGKPQGPPPQGDNKSQSARSP 238
Query: 1016 AGSTAGPQQQ---QPAGAPQPGAVPPGVPPPG---PHGPSPFPNQQTPPSMMPGAVPGSG 1069
G GP Q QP G P P P G PP G P GP P Q PP P G
Sbjct: 239 PGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPP-------PQGG 291
Query: 1070 HPGVAGNAPLGLPFGMPP--------PPPPPAPSIIPFGSLADSISINLPAPPNLHGHHH 1121
+ +P G P G PP PPPPP P G PP G+
Sbjct: 292 SKSRSSRSPPGKPQGPPPQGGNQPQGPPPPPGK---PQG------------PPPQGGNKP 336
Query: 1122 HLPFAPGTLPPPNLPVSMANPLHPNLPATTTMPSSLPLGPGLGSAAAQSPAIVAAVQGNL 1181
P PPP P P + + P P GP A
Sbjct: 337 QGP------PPPGKPQG-PPPQGGSKSRSARSPPGKPQGPPQQEGNNPQGPPPPAGGNPQ 389
Query: 1182 LPSASPLPDP-GTPLPPDPTAPS 1203
P A P P G P PP PS
Sbjct: 390 QPQAPPAGQPQGPPRPPQGGRPS 412
Score = 59.7 bits (143), Expect = 2e-08
Identities = 89/300 (29%), Positives = 97/300 (32%), Gaps = 62/300 (20%)
Query: 957 QQQQPPPALPPGS-QPIPPTGA---AGPPAVHGLAVAPASVVPAPAGSGAPPGS-LGPSE 1011
Q Q PPP PPG Q PP G GPP P S +PPG GP
Sbjct: 128 QPQGPPP--PPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDNKSRSSRSPPGKPQGPPP 185
Query: 1012 QIGQAGSTAGPQQQQPAGAP-QPGAVPPGVPPPG----------------------PHGP 1048
Q G P +P G P Q G P G PPPG P GP
Sbjct: 186 QGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDNKSQSARSPPGKPQGP 245
Query: 1049 SPFPNQQT-----PPSMMPGAVPGSGHPGVAGNAPLGLPFGMPPPPPPPAPSIIPFGSLA 1103
P Q PP G P G+ P G PPP P P P G
Sbjct: 246 PPQGGNQPQGPPPPPGKPQGPPPQGGNK----------PQGPPPPGKPQGPP--PQGGSK 293
Query: 1104 DSISINLP----APPNLHGHHHHLPFAPGTLPPPNLPVSMANPLHPNLPATTTMPSSLPL 1159
S + P PP G+ P P P P P P P P P
Sbjct: 294 SRSSRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPG---KPQGPPP 350
Query: 1160 GPGLGSAAAQS----PAIVAAVQGNLLPSASPLPDPGTPLPPDPTAPSPGTVT-PVPPPQ 1214
G S +A+S P +GN P P P G P P AP G P PPQ
Sbjct: 351 QGGSKSRSARSPPGKPQGPPQQEGN-NPQGPPPPAGGN--PQQPQAPPAGQPQGPPRPPQ 407
Score = 58.9 bits (141), Expect = 3e-08
Identities = 57/166 (34%), Positives = 60/166 (36%), Gaps = 26/166 (15%)
Query: 957 QQQQPPPALPPGS-QPIPPTGA---AGPPAVHGLAVAPASVVPAPAGSGAPPGS-LGPSE 1011
Q Q PPP PPG Q PP G GPP P S +PPG GP
Sbjct: 252 QPQGPPP--PPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGGSKSRSSRSPPGKPQGPPP 309
Query: 1012 QIGQAGSTAGPQQQQPAGAP-QPGAVPPGVPPPG-PHGPSPF-----------PNQQTPP 1058
Q G P +P G P Q G P G PPPG P GP P P + P
Sbjct: 310 QGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGGSKSRSARSPPGKPQGP 369
Query: 1059 SMMPGAVPGSGHPGVAGNA------PLGLPFGMPPPPPPPAPSIIP 1098
G P P GN P G P G P PP PS P
Sbjct: 370 PQQEGNNPQGPPPPAGGNPQQPQAPPAGQPQGPPRPPQGGRPSRPP 415
>gi|162329583 cleavage and polyadenylation specific factor 6, 68 kD
subunit [Homo sapiens]
Length = 551
Score = 75.5 bits (184), Expect = 3e-13
Identities = 64/203 (31%), Positives = 75/203 (36%), Gaps = 43/203 (21%)
Query: 962 PPALPPGSQPIPPTGAAGPPAVHGLAVAPASVVPAPAGSGAPPGSLGPSEQIGQAGSTAG 1021
P A+P G + P G GPP P P G PPG P + + AG
Sbjct: 208 PGAVPGGDRFPGPAGPGGPPPPFPAGQTPPRPPLGPPGPPGPPGPPPPGQVL--PPPLAG 265
Query: 1022 PQQQ------------QPAGAPQPGAVPPGVPPPGP-HGPSPFPNQQTPPSMMPGAVPGS 1068
P + QP G P G +PPG PPP P +GP P P PP P PG
Sbjct: 266 PPNRGDRPPPPVLFPGQPFGQPPLGPLPPGPPPPVPGYGPPPGP---PPPQQGPPPPPGP 322
Query: 1069 GHPGVAGNAPLGLPFGMPPPP---------PPPAPSIIPFGSLADSISINLPAPPNLHGH 1119
P G PLG P + PPP PPPAP + P P P N
Sbjct: 323 FPPRPPG--PLGPPLTLAPPPHLPGPPPGAPPPAPHVNP---------AFFPPPTN---- 367
Query: 1120 HHHLPFAPGTLPPPNLPVSMANP 1142
+P + PPP P P
Sbjct: 368 -SGMPTSDSRGPPPTDPYGRPPP 389
Score = 71.2 bits (173), Expect = 5e-12
Identities = 69/207 (33%), Positives = 78/207 (37%), Gaps = 60/207 (28%)
Query: 961 PPPALPPG-SQPIPPTGAAGPPAVHGLAVAPASVVPAPAGSGAPPGSLGPSEQIGQAGST 1019
PPP P G + P PP G GPP G P P G PP GP + G
Sbjct: 226 PPPPFPAGQTPPRPPLGPPGPPGPPG---------PPPPGQVLPPPLAGPPNR----GDR 272
Query: 1020 AGPQ---QQQPAGAPQPGAVPPGVPPPGP-HGPSPFPNQQTPPSMMPGAVPGSGHPGVAG 1075
P QP G P G +PPG PPP P +GP P P PP P G
Sbjct: 273 PPPPVLFPGQPFGQPPLGPLPPGPPPPVPGYGPPPGP----PP-------PQQG------ 315
Query: 1076 NAPLGLPFGMPPPPPPPAP-SIIPFGSLADSISINLPAPPNLHGHHHHLPFAPGTLPPPN 1134
PPPPP P P G L +++ APP HLP P PP
Sbjct: 316 ------------PPPPPGPFPPRPPGPLGPPLTL---APP------PHLPGPPPGAPP-- 352
Query: 1135 LPVSMANPLHPNLPATTTMPSSLPLGP 1161
P NP P + MP+S GP
Sbjct: 353 -PAPHVNPAFFPPPTNSGMPTSDSRGP 378
Score = 68.2 bits (165), Expect = 5e-11
Identities = 70/220 (31%), Positives = 76/220 (34%), Gaps = 59/220 (26%)
Query: 998 AGSGAPPGSLGPSEQIGQAGSTAGPQQQQPAGAPQPGAVPPGVPPPGPHGPS----PFPN 1053
+G + G GP G + A PQ + G PGAVP G PGP GP PFP
Sbjct: 177 SGQMSGEGKAGPP---GGSSRAAFPQGGRGRGR-FPGAVPGGDRFPGPAGPGGPPPPFPA 232
Query: 1054 QQTPPSMMPGAVPGSGHPGVAGNAPLGLPFGMPPPPPPPAPSIIPFGSLADSISINLPAP 1113
QTPP P G PG G PP PPPP + P L P
Sbjct: 233 GQTPPR------PPLGPPGPPG----------PPGPPPPGQVLPP----------PLAGP 266
Query: 1114 PNLHGHHHHLPFAPGTLPPPNLPVSMANPLHPNLPATTTMPSSLPLGPGLGSAAAQSPAI 1173
PN G PPP PV P P P PG G P
Sbjct: 267 PNR-----------GDRPPP--PVLFPGQPFGQPPLGPLPPGPPPPVPGYGPPPGPPP-- 311
Query: 1174 VAAVQGNLLPSASPLPDPGTPLPPDPTAPSPGTVTPVPPP 1213
P P P PG P PP P P +T PPP
Sbjct: 312 ---------PQQGPPPPPG-PFPPRPPGPLGPPLTLAPPP 341
Score = 50.4 bits (119), Expect = 1e-05
Identities = 44/131 (33%), Positives = 49/131 (37%), Gaps = 40/131 (30%)
Query: 961 PPPALPP-GSQPIPPTGAAGPPAVHGLAVAPASVVPAPAGSGAPPGSLGPSEQIGQAGST 1019
PPP +P G P PP GPP P P P G PP +L P
Sbjct: 296 PPPPVPGYGPPPGPPPPQQGPPP------PPGPFPPRPPGPLGPPLTLAP---------- 339
Query: 1020 AGPQQQQPAGAPQPGAVPPGVPPPGPH-GPSPFPNQQTPPSMMPGAVPGSGHPGVAGNAP 1078
P P P PPG PPP PH P+ FP PP+ SG P P
Sbjct: 340 -------PPHLPGP---PPGAPPPAPHVNPAFFP----PPT-------NSGMPTSDSRGP 378
Query: 1079 LGL-PFGMPPP 1088
P+G PPP
Sbjct: 379 PPTDPYGRPPP 389
Score = 49.3 bits (116), Expect = 2e-05
Identities = 59/181 (32%), Positives = 62/181 (34%), Gaps = 63/181 (34%)
Query: 1042 PPGPHGPSPFPNQQTPPSMMPGAVPGSGH-PGVAGNAPLGLPFGMPPPPP----PPAPSI 1096
PPG + FP PGAVPG PG AG P G PPP P PP P +
Sbjct: 188 PPGGSSRAAFPQGGRGRGRFPGAVPGGDRFPGPAG------PGGPPPPFPAGQTPPRPPL 241
Query: 1097 IPFGSLADSISINLPAPPNLHGHHHHLPFAPG-TLPPPNLPVSMANPLHPNLPATTTMPS 1155
P G P PP P PG LPPP +A P P P
Sbjct: 242 GPPGP---------PGPPG--------PPPPGQVLPPP-----LAGP-----PNRGDRPP 274
Query: 1156 SLPLGPGLGSAAAQSPAIVAAVQGNLLPSASPLPDPGTPLPPDPTAPSPGTVTP--VPPP 1213
L PG P P P PLPP P P PG P PPP
Sbjct: 275 PPVLFPGQ-------------------PFGQP---PLGPLPPGPPPPVPGYGPPPGPPPP 312
Query: 1214 Q 1214
Q
Sbjct: 313 Q 313
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.310 0.129 0.381
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 62,346,811
Number of Sequences: 37866
Number of extensions: 4247473
Number of successful extensions: 80080
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 885
Number of HSP's successfully gapped in prelim test: 2753
Number of HSP's that attempted gapping in prelim test: 24822
Number of HSP's gapped (non-prelim): 27321
length of query: 1214
length of database: 18,247,518
effective HSP length: 114
effective length of query: 1100
effective length of database: 13,930,794
effective search space: 15323873400
effective search space used: 15323873400
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 68 (30.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.