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Search of human proteins with 211971058
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|211971058 G protein-coupled receptor 107 isoform 1 [Homo
sapiens]
(600 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|211971058 G protein-coupled receptor 107 isoform 1 [Homo sapi... 1196 0.0
gi|211971060 G protein-coupled receptor 107 isoform 2 [Homo sapi... 1124 0.0
gi|56711308 G protein-coupled receptor 107 isoform 3 [Homo sapiens] 1080 0.0
gi|122937301 G protein-coupled receptor 108 isoform 1 [Homo sapi... 493 e-139
gi|130489591 G protein-coupled receptor 108 isoform 2 [Homo sapi... 414 e-115
gi|14249524 transmembrane protein 87B [Homo sapiens] 52 1e-06
gi|28212280 hypothetical protein LOC283579 [Homo sapiens] 46 1e-04
gi|63999355 chromosome 9 open reading frame 37 [Homo sapiens] 44 4e-04
gi|31377765 transmembrane protein 87A isoform 1 [Homo sapiens] 43 7e-04
gi|62243734 signal transducing adaptor family member 2 isoform 1... 41 0.004
gi|54112407 protein kinase CHK2 isoform c [Homo sapiens] 40 0.006
gi|29029530 sulfotransferase family, cytosolic, 1C, member 1 iso... 40 0.008
gi|119964690 glycogenin 2 isoform b [Homo sapiens] 38 0.030
gi|169213800 PREDICTED: hypothetical protein [Homo sapiens] 36 0.089
gi|169214229 PREDICTED: hypothetical protein [Homo sapiens] 36 0.089
gi|169213573 PREDICTED: hypothetical protein [Homo sapiens] 36 0.089
gi|194473995 zinc finger protein 195 isoform 2 [Homo sapiens] 36 0.089
gi|194473688 zinc finger protein 195 isoform 1 [Homo sapiens] 36 0.089
gi|237858668 hypothetical protein LOC123207 isoform d [Homo sapi... 35 0.15
gi|217035093 cyclic nucleotide gated channel alpha 1 isoform 1 [... 35 0.20
gi|239747074 PREDICTED: hypothetical protein XP_002343911 [Homo ... 35 0.20
gi|169216761 PREDICTED: hCG_1742852 [Homo sapiens] 35 0.20
gi|169216486 PREDICTED: hCG_1742852 [Homo sapiens] 35 0.26
gi|169216528 PREDICTED: hCG_1742852 [Homo sapiens] 35 0.26
gi|195963398 suppressor of G2 allele of SKP1 isoform a [Homo sap... 35 0.26
gi|239751420 PREDICTED: similar to hCG2039376 [Homo sapiens] 34 0.34
gi|61744477 solute carrier family 3, member 2 isoform b [Homo sa... 34 0.34
gi|61744475 solute carrier family 3, member 2 isoform a [Homo sa... 34 0.34
gi|66277202 podocalyxin-like isoform 1 precursor [Homo sapiens] 34 0.44
gi|224494572 hypothetical protein LOC401082 [Homo sapiens] 33 0.98
>gi|211971058 G protein-coupled receptor 107 isoform 1 [Homo
sapiens]
Length = 600
Score = 1196 bits (3094), Expect = 0.0
Identities = 600/600 (100%), Positives = 600/600 (100%)
Query: 1 MAALAPVGSPASRGPRLAAGLRLLPMLGLLQLLAEPGLGRVHHLALKDDVRHKVHLNTFG 60
MAALAPVGSPASRGPRLAAGLRLLPMLGLLQLLAEPGLGRVHHLALKDDVRHKVHLNTFG
Sbjct: 1 MAALAPVGSPASRGPRLAAGLRLLPMLGLLQLLAEPGLGRVHHLALKDDVRHKVHLNTFG 60
Query: 61 FFKDGYMVVNVSSLSLNEPEDKDVTIGFSLDRTKNDGFSSYLDEDVNYCILKKQSVSVTL 120
FFKDGYMVVNVSSLSLNEPEDKDVTIGFSLDRTKNDGFSSYLDEDVNYCILKKQSVSVTL
Sbjct: 61 FFKDGYMVVNVSSLSLNEPEDKDVTIGFSLDRTKNDGFSSYLDEDVNYCILKKQSVSVTL 120
Query: 121 LILDISRSEVRVKSPPEAGTQLPKIIFSRDEKVLGQSQEPNVNPASAGNQTQKTQDGGKS 180
LILDISRSEVRVKSPPEAGTQLPKIIFSRDEKVLGQSQEPNVNPASAGNQTQKTQDGGKS
Sbjct: 121 LILDISRSEVRVKSPPEAGTQLPKIIFSRDEKVLGQSQEPNVNPASAGNQTQKTQDGGKS 180
Query: 181 KRSTVDSKAMGEKSFSVHNNGGAVSFQFFFNISTDDQEGLYSLYFHKCLGKELPSDKFTF 240
KRSTVDSKAMGEKSFSVHNNGGAVSFQFFFNISTDDQEGLYSLYFHKCLGKELPSDKFTF
Sbjct: 181 KRSTVDSKAMGEKSFSVHNNGGAVSFQFFFNISTDDQEGLYSLYFHKCLGKELPSDKFTF 240
Query: 241 SLDIEITEKNPDSYLSAGEIPLPKLYISMAFFFFLSGTIWIHILRKRRNDVFKIHWLMAA 300
SLDIEITEKNPDSYLSAGEIPLPKLYISMAFFFFLSGTIWIHILRKRRNDVFKIHWLMAA
Sbjct: 241 SLDIEITEKNPDSYLSAGEIPLPKLYISMAFFFFLSGTIWIHILRKRRNDVFKIHWLMAA 300
Query: 301 LPFTKSLSLVFHAIDYHYISSQGFPIEGWAVVYYITHLLKGALLFITIALIGTGWAFIKH 360
LPFTKSLSLVFHAIDYHYISSQGFPIEGWAVVYYITHLLKGALLFITIALIGTGWAFIKH
Sbjct: 301 LPFTKSLSLVFHAIDYHYISSQGFPIEGWAVVYYITHLLKGALLFITIALIGTGWAFIKH 360
Query: 361 ILSDKDKKIFMIVIPLQVLANVAYIIIESTEEGTTEYGLWKDSLFLVDLLCCGAILFPVV 420
ILSDKDKKIFMIVIPLQVLANVAYIIIESTEEGTTEYGLWKDSLFLVDLLCCGAILFPVV
Sbjct: 361 ILSDKDKKIFMIVIPLQVLANVAYIIIESTEEGTTEYGLWKDSLFLVDLLCCGAILFPVV 420
Query: 421 WSIRHLQEASATDGKGDSMGPLQQRANLRAGSRIESHHFAQADLELLASSCPPASVSQRA 480
WSIRHLQEASATDGKGDSMGPLQQRANLRAGSRIESHHFAQADLELLASSCPPASVSQRA
Sbjct: 421 WSIRHLQEASATDGKGDSMGPLQQRANLRAGSRIESHHFAQADLELLASSCPPASVSQRA 480
Query: 481 GITAAINLAKLKLFRHYYVLIVCYIYFTRIIAFLLKLAVPFQWKWLYQLLDETATLVFFV 540
GITAAINLAKLKLFRHYYVLIVCYIYFTRIIAFLLKLAVPFQWKWLYQLLDETATLVFFV
Sbjct: 481 GITAAINLAKLKLFRHYYVLIVCYIYFTRIIAFLLKLAVPFQWKWLYQLLDETATLVFFV 540
Query: 541 LTGYKFRPASDNPYLQLSQEEEDLEMESVVTTSGVMESMKKVKKVTNGSVEPQGEWEGAV 600
LTGYKFRPASDNPYLQLSQEEEDLEMESVVTTSGVMESMKKVKKVTNGSVEPQGEWEGAV
Sbjct: 541 LTGYKFRPASDNPYLQLSQEEEDLEMESVVTTSGVMESMKKVKKVTNGSVEPQGEWEGAV 600
>gi|211971060 G protein-coupled receptor 107 isoform 2 [Homo
sapiens]
Length = 571
Score = 1124 bits (2907), Expect = 0.0
Identities = 571/600 (95%), Positives = 571/600 (95%), Gaps = 29/600 (4%)
Query: 1 MAALAPVGSPASRGPRLAAGLRLLPMLGLLQLLAEPGLGRVHHLALKDDVRHKVHLNTFG 60
MAALAPVGSPASRGPRLAAGLRLLPMLGLLQLLAEPGLGRVHHLALKDDVRHKVHLNTFG
Sbjct: 1 MAALAPVGSPASRGPRLAAGLRLLPMLGLLQLLAEPGLGRVHHLALKDDVRHKVHLNTFG 60
Query: 61 FFKDGYMVVNVSSLSLNEPEDKDVTIGFSLDRTKNDGFSSYLDEDVNYCILKKQSVSVTL 120
FFKDGYMVVNVSSLSLNEPEDKDVTIGFSLDRTKNDGFSSYLDEDVNYCILKKQSVSVTL
Sbjct: 61 FFKDGYMVVNVSSLSLNEPEDKDVTIGFSLDRTKNDGFSSYLDEDVNYCILKKQSVSVTL 120
Query: 121 LILDISRSEVRVKSPPEAGTQLPKIIFSRDEKVLGQSQEPNVNPASAGNQTQKTQDGGKS 180
LILDISRSEVRVKSPPEAGTQLPKIIFSRDEKVLGQSQEPNVNPASAGNQTQKTQDGGKS
Sbjct: 121 LILDISRSEVRVKSPPEAGTQLPKIIFSRDEKVLGQSQEPNVNPASAGNQTQKTQDGGKS 180
Query: 181 KRSTVDSKAMGEKSFSVHNNGGAVSFQFFFNISTDDQEGLYSLYFHKCLGKELPSDKFTF 240
KRSTVDSKAMGEKSFSVHNNGGAVSFQFFFNISTDDQEGLYSLYFHKCLGKELPSDKFTF
Sbjct: 181 KRSTVDSKAMGEKSFSVHNNGGAVSFQFFFNISTDDQEGLYSLYFHKCLGKELPSDKFTF 240
Query: 241 SLDIEITEKNPDSYLSAGEIPLPKLYISMAFFFFLSGTIWIHILRKRRNDVFKIHWLMAA 300
SLDIEITEKNPDSYLSAGEIPLPKLYISMAFFFFLSGTIWIHILRKRRNDVFKIHWLMAA
Sbjct: 241 SLDIEITEKNPDSYLSAGEIPLPKLYISMAFFFFLSGTIWIHILRKRRNDVFKIHWLMAA 300
Query: 301 LPFTKSLSLVFHAIDYHYISSQGFPIEGWAVVYYITHLLKGALLFITIALIGTGWAFIKH 360
LPFTKSLSLVFHAIDYHYISSQGFPIEGWAVVYYITHLLKGALLFITIALIGTGWAFIKH
Sbjct: 301 LPFTKSLSLVFHAIDYHYISSQGFPIEGWAVVYYITHLLKGALLFITIALIGTGWAFIKH 360
Query: 361 ILSDKDKKIFMIVIPLQVLANVAYIIIESTEEGTTEYGLWKDSLFLVDLLCCGAILFPVV 420
ILSDKDKKIFMIVIPLQVLANVAYIIIESTEEGTTEYGLWKDSLFLVDLLCCGAILFPVV
Sbjct: 361 ILSDKDKKIFMIVIPLQVLANVAYIIIESTEEGTTEYGLWKDSLFLVDLLCCGAILFPVV 420
Query: 421 WSIRHLQEASATDGKGDSMGPLQQRANLRAGSRIESHHFAQADLELLASSCPPASVSQRA 480
WSIRHLQEASATDGKGDSMGPLQQRANLRAGSRI
Sbjct: 421 WSIRHLQEASATDGKGDSMGPLQQRANLRAGSRI-------------------------- 454
Query: 481 GITAAINLAKLKLFRHYYVLIVCYIYFTRIIAFLLKLAVPFQWKWLYQLLDETATLVFFV 540
AAINLAKLKLFRHYYVLIVCYIYFTRIIAFLLKLAVPFQWKWLYQLLDETATLVFFV
Sbjct: 455 ---AAINLAKLKLFRHYYVLIVCYIYFTRIIAFLLKLAVPFQWKWLYQLLDETATLVFFV 511
Query: 541 LTGYKFRPASDNPYLQLSQEEEDLEMESVVTTSGVMESMKKVKKVTNGSVEPQGEWEGAV 600
LTGYKFRPASDNPYLQLSQEEEDLEMESVVTTSGVMESMKKVKKVTNGSVEPQGEWEGAV
Sbjct: 512 LTGYKFRPASDNPYLQLSQEEEDLEMESVVTTSGVMESMKKVKKVTNGSVEPQGEWEGAV 571
>gi|56711308 G protein-coupled receptor 107 isoform 3 [Homo sapiens]
Length = 552
Score = 1080 bits (2793), Expect = 0.0
Identities = 552/600 (92%), Positives = 552/600 (92%), Gaps = 48/600 (8%)
Query: 1 MAALAPVGSPASRGPRLAAGLRLLPMLGLLQLLAEPGLGRVHHLALKDDVRHKVHLNTFG 60
MAALAPVGSPASRGPRLAAGLRLLPMLGLLQLLAEPGLGRVHHLALKDDVRHKVHLNTFG
Sbjct: 1 MAALAPVGSPASRGPRLAAGLRLLPMLGLLQLLAEPGLGRVHHLALKDDVRHKVHLNTFG 60
Query: 61 FFKDGYMVVNVSSLSLNEPEDKDVTIGFSLDRTKNDGFSSYLDEDVNYCILKKQSVSVTL 120
FFKDGYMVVNVSSLSLNEPEDKDVTIGFSLDRTKNDGFSSYLDEDVNYCILKKQSVSVTL
Sbjct: 61 FFKDGYMVVNVSSLSLNEPEDKDVTIGFSLDRTKNDGFSSYLDEDVNYCILKKQSVSVTL 120
Query: 121 LILDISRSEVRVKSPPEAGTQLPKIIFSRDEKVLGQSQEPNVNPASAGNQTQKTQDGGKS 180
LILDISRSEVRVKSPPEAGTQLPKIIFSRDEKVLGQSQEPNVNPASAGNQTQKTQDGGKS
Sbjct: 121 LILDISRSEVRVKSPPEAGTQLPKIIFSRDEKVLGQSQEPNVNPASAGNQTQKTQDGGKS 180
Query: 181 KRSTVDSKAMGEKSFSVHNNGGAVSFQFFFNISTDDQEGLYSLYFHKCLGKELPSDKFTF 240
KRSTVDSKAMGEKSFSVHNNGGAVSFQFFFNISTDDQEGLYSLYFHKCLGKELPSDKFTF
Sbjct: 181 KRSTVDSKAMGEKSFSVHNNGGAVSFQFFFNISTDDQEGLYSLYFHKCLGKELPSDKFTF 240
Query: 241 SLDIEITEKNPDSYLSAGEIPLPKLYISMAFFFFLSGTIWIHILRKRRNDVFKIHWLMAA 300
SLDIEITEKNPDSYLSAGEIPLPKLYISMAFFFFLSGTIWIHILRKRRNDVFKIHWLMAA
Sbjct: 241 SLDIEITEKNPDSYLSAGEIPLPKLYISMAFFFFLSGTIWIHILRKRRNDVFKIHWLMAA 300
Query: 301 LPFTKSLSLVFHAIDYHYISSQGFPIEGWAVVYYITHLLKGALLFITIALIGTGWAFIKH 360
LPFTKSLSLVFHAIDYHYISSQGFPIEGWAVVYYITHLLKGALLFITIALIGTGWAFIKH
Sbjct: 301 LPFTKSLSLVFHAIDYHYISSQGFPIEGWAVVYYITHLLKGALLFITIALIGTGWAFIKH 360
Query: 361 ILSDKDKKIFMIVIPLQVLANVAYIIIESTEEGTTEYGLWKDSLFLVDLLCCGAILFPVV 420
ILSDKDKKIFMIVIPLQVLANVAYIIIESTEEGTTEYGLWKDSLFLVDLLCCGAILFPVV
Sbjct: 361 ILSDKDKKIFMIVIPLQVLANVAYIIIESTEEGTTEYGLWKDSLFLVDLLCCGAILFPVV 420
Query: 421 WSIRHLQEASATDGKGDSMGPLQQRANLRAGSRIESHHFAQADLELLASSCPPASVSQRA 480
WSIRHLQEASATDGK
Sbjct: 421 WSIRHLQEASATDGK--------------------------------------------- 435
Query: 481 GITAAINLAKLKLFRHYYVLIVCYIYFTRIIAFLLKLAVPFQWKWLYQLLDETATLVFFV 540
AAINLAKLKLFRHYYVLIVCYIYFTRIIAFLLKLAVPFQWKWLYQLLDETATLVFFV
Sbjct: 436 ---AAINLAKLKLFRHYYVLIVCYIYFTRIIAFLLKLAVPFQWKWLYQLLDETATLVFFV 492
Query: 541 LTGYKFRPASDNPYLQLSQEEEDLEMESVVTTSGVMESMKKVKKVTNGSVEPQGEWEGAV 600
LTGYKFRPASDNPYLQLSQEEEDLEMESVVTTSGVMESMKKVKKVTNGSVEPQGEWEGAV
Sbjct: 493 LTGYKFRPASDNPYLQLSQEEEDLEMESVVTTSGVMESMKKVKKVTNGSVEPQGEWEGAV 552
>gi|122937301 G protein-coupled receptor 108 isoform 1 [Homo
sapiens]
Length = 543
Score = 493 bits (1269), Expect = e-139
Identities = 282/593 (47%), Positives = 363/593 (61%), Gaps = 77/593 (12%)
Query: 8 GSPASRGPRLAAGLRLLPMLGLLQLLAEPGLGRVHHLALKDDVRHKVHLNTFGFFKDGYM 67
GSPA G RL LL LL GR+H LAL + R + LN+FGF+ +G +
Sbjct: 12 GSPAEWGQRL-----------LLVLLLGGCSGRIHQLALTGEKRADIQLNSFGFYTNGSL 60
Query: 68 VVNVS--SLSLNEPEDKDVTIGFSLDRTKNDGFSSYLDEDVNYCILKKQSVSVTLLILDI 125
V +S L L E E+K + +GFSL R ++ SY D C L+K S S +L L I
Sbjct: 61 EVELSVLRLGLREAEEKSLLVGFSLSRVRSGRVRSYSTRDFQDCPLQKNSSSFLVLFL-I 119
Query: 126 SRSEVRVKSPPEAGTQLPKIIFSRDEKVLGQSQEPNVNPASAGNQTQKTQDGG------- 178
+ +++V+ + G Q IF +L ++ P +K GG
Sbjct: 120 NTKDLQVQVR-KYGEQKTLFIFPG---LLPEAPSKPGLPKPQATVPRKVDGGGTSAASKP 175
Query: 179 KSKRSTVDSKAMGEKSF--SVHNNGGAVSFQFFFNISTDDQEGLYSLYFHKCLGKELPSD 236
KS + + + +K + + + +F F I + +EG YSL FH C +P
Sbjct: 176 KSTPAVIQGPSGKDKDLVLGLSHLNNSYNFSFHVVIGSQAEEGQYSLNFHNC-NNSVPGK 234
Query: 237 KFTFSLDIEITEKNPDSYLSAGEIPLPKLYISMAFFFFLSGTIWIHILRKRRNDVFKIHW 296
+ F + + I EKNPD +LSA E+PL KLY+ M+ F +G W+ IL + VFKIHW
Sbjct: 235 EHPFDITVMIREKNPDGFLSAAEMPLFKLYMVMSACFLAAGIFWVSILCRNTYSVFKIHW 294
Query: 297 LMAALPFTKSLSLVFHAIDYHYISSQGFPIEGWAVVYYITHLLKGALLFITIALIGTGWA 356
LMAAL FTKS+SL+FH+I+Y++I+SQG PIEG AV+YYI HLLKGALLFITIALIG+GWA
Sbjct: 295 LMAALAFTKSISLLFHSINYYFINSQGHPIEGLAVMYYIAHLLKGALLFITIALIGSGWA 354
Query: 357 FIKHILSDKDKKIFMIVIPLQVLANVAYIIIESTEEGTTEYGLWKDSLFLVDLLCCGAIL 416
FIK++LSDK+KK+F IVIP+QVLANVAYIIIES EEG ++Y LWK+ LFLVDL+CCGAIL
Sbjct: 355 FIKYVLSDKEKKVFGIVIPMQVLANVAYIIIESREEGASDYVLWKEILFLVDLICCGAIL 414
Query: 417 FPVVWSIRHLQEASATDGKGDSMGPLQQRANLRAGSRIESHHFAQADLELLASSCPPASV 476
FPVVWSIRHLQ+AS TDGK
Sbjct: 415 FPVVWSIRHLQDASGTDGK----------------------------------------- 433
Query: 477 SQRAGITAAINLAKLKLFRHYYVLIVCYIYFTRIIAFLLKLAVPFQWKWLYQLLDETATL 536
A+NLAKLKLFRHYYV+++CY+YFTRIIA LL++AVPFQW+WLYQLL E +TL
Sbjct: 434 -------VAVNLAKLKLFRHYYVMVICYVYFTRIIAILLQVAVPFQWQWLYQLLVEGSTL 486
Query: 537 VFFVLTGYKFRPASDNPYLQLSQE-EEDLEMESVVTTSGVMESMKKVKKVTNG 588
FFVLTGYKF+P +NPYLQL QE EED++ME V+T SG E + KV K +G
Sbjct: 487 AFFVLTGYKFQPTGNNPYLQLPQEDEEDVQMEQVMTDSGFREGLSKVNKTASG 539
>gi|130489591 G protein-coupled receptor 108 isoform 2 [Homo
sapiens]
Length = 301
Score = 414 bits (1063), Expect = e-115
Identities = 209/344 (60%), Positives = 251/344 (72%), Gaps = 49/344 (14%)
Query: 246 ITEKNPDSYLSAGEIPLPKLYISMAFFFFLSGTIWIHILRKRRNDVFKIHWLMAALPFTK 305
I EKNPD +LSA E+PL KLY+ M+ F +G W+ IL + VFKIHWLMAAL FTK
Sbjct: 2 IREKNPDGFLSAAEMPLFKLYMVMSACFLAAGIFWVSILCRNTYSVFKIHWLMAALAFTK 61
Query: 306 SLSLVFHAIDYHYISSQGFPIEGWAVVYYITHLLKGALLFITIALIGTGWAFIKHILSDK 365
S+SL+FH+I+Y++I+SQG PIEG AV+YYI HLLKGALLFITIALIG+GWAFIK++LSDK
Sbjct: 62 SISLLFHSINYYFINSQGHPIEGLAVMYYIAHLLKGALLFITIALIGSGWAFIKYVLSDK 121
Query: 366 DKKIFMIVIPLQVLANVAYIIIESTEEGTTEYGLWKDSLFLVDLLCCGAILFPVVWSIRH 425
+KK+F IVIP+QVLANVAYIIIES EEG ++Y LWK+ LFLVDL+CCGAILFPVVWSIRH
Sbjct: 122 EKKVFGIVIPMQVLANVAYIIIESREEGASDYVLWKEILFLVDLICCGAILFPVVWSIRH 181
Query: 426 LQEASATDGKGDSMGPLQQRANLRAGSRIESHHFAQADLELLASSCPPASVSQRAGITAA 485
LQ+AS TDGK A
Sbjct: 182 LQDASGTDGK------------------------------------------------VA 193
Query: 486 INLAKLKLFRHYYVLIVCYIYFTRIIAFLLKLAVPFQWKWLYQLLDETATLVFFVLTGYK 545
+NLAKLKLFRHYYV+++CY+YFTRIIA LL++AVPFQW+WLYQLL E +TL FFVLTGYK
Sbjct: 194 VNLAKLKLFRHYYVMVICYVYFTRIIAILLQVAVPFQWQWLYQLLVEGSTLAFFVLTGYK 253
Query: 546 FRPASDNPYLQLSQE-EEDLEMESVVTTSGVMESMKKVKKVTNG 588
F+P +NPYLQL QE EED++ME V+T SG E + KV K +G
Sbjct: 254 FQPTGNNPYLQLPQEDEEDVQMEQVMTDSGFREGLSKVNKTASG 297
>gi|14249524 transmembrane protein 87B [Homo sapiens]
Length = 555
Score = 52.4 bits (124), Expect = 1e-06
Identities = 27/121 (22%), Positives = 57/121 (47%)
Query: 239 TFSLDIEITEKNPDSYLSAGEIPLPKLYISMAFFFFLSGTIWIHILRKRRNDVFKIHWLM 298
+++L++ ++ P Y+SA + PL Y+ M + L G +W+ D+ +I + +
Sbjct: 193 SWNLNVSLSMIGPHGYISASDWPLMIFYMVMCIVYILYGILWLTWSACYWKDILRIQFWI 252
Query: 299 AALPFTKSLSLVFHAIDYHYISSQGFPIEGWAVVYYITHLLKGALLFITIALIGTGWAFI 358
AA+ F L +Y IS+ G +G + + +K L + + ++ G+ +
Sbjct: 253 AAVIFLGMLEKAVFYSEYQNISNTGLSTQGLLIFAELISAIKRTLARLLVIIVSLGYGIV 312
Query: 359 K 359
K
Sbjct: 313 K 313
>gi|28212280 hypothetical protein LOC283579 [Homo sapiens]
Length = 122
Score = 45.8 bits (107), Expect = 1e-04
Identities = 23/35 (65%), Positives = 26/35 (74%)
Query: 456 SHHFAQADLELLASSCPPASVSQRAGITAAINLAK 490
SH+FAQA LELL SS PPAS SQ AGIT + A+
Sbjct: 33 SHYFAQAGLELLGSSNPPASASQSAGITGVSHCAR 67
>gi|63999355 chromosome 9 open reading frame 37 [Homo sapiens]
Length = 176
Score = 43.9 bits (102), Expect = 4e-04
Identities = 22/37 (59%), Positives = 26/37 (70%)
Query: 454 IESHHFAQADLELLASSCPPASVSQRAGITAAINLAK 490
+E H+ AQADLELL SS PPAS SQ GIT + A+
Sbjct: 1 MEFHYVAQADLELLTSSNPPASASQSTGITGGSHRAR 37
>gi|31377765 transmembrane protein 87A isoform 1 [Homo sapiens]
Length = 555
Score = 43.1 bits (100), Expect = 7e-04
Identities = 29/152 (19%), Positives = 65/152 (42%), Gaps = 10/152 (6%)
Query: 240 FSLDIEITEKNPDSYLSAGEIPLPKLYISMAFFFFLSGTIWIHILRKRRNDVFKIHWLMA 299
F++ +E+ K P YL+ + PL ++ M + L G +W+ D+ +I + +
Sbjct: 206 FTMTVEV--KGPYEYLTLEDYPLMIFFMVMCIVYVLFGVLWLAWSACYWRDLLRIQFWIG 263
Query: 300 ALPFTKSLSLVFHAIDYHYISSQGFPIEGWAVVYYITHLLKGALLFITIALIGTGWAFIK 359
A+ F L ++ I +G ++G ++ + +K +L + ++ G+ +K
Sbjct: 264 AVIFLGMLEKAVFYAEFQNIRYKGESVQGALILAELLSAVKRSLARTLVIIVSLGYGIVK 323
Query: 360 HILSDKDKKIFMIVIPLQVLANVAYIIIESTE 391
L + + V+A Y++ E
Sbjct: 324 PRLG--------VTLHKVVVAGALYLLFSGME 347
Score = 32.0 bits (71), Expect = 1.7
Identities = 30/120 (25%), Positives = 56/120 (46%), Gaps = 23/120 (19%)
Query: 487 NLAKLKLFRHYYVLIVCYIYFTRIIAFLLKLAVPFQ-------WK--W----LYQLLDET 533
N+ KL L+RH+ ++ + + I F++ + F+ W+ W +++LL
Sbjct: 394 NIVKLSLYRHFTNTLILAVAAS--IVFIIWTTMKFRIVTCQSDWRELWVDDAIWRLLFSM 451
Query: 534 ATLVFFVLTGYKFRPASDNPYLQLS----QEEEDLEMESVVTTSGVMESMKKVKKVTNGS 589
V VL +RP+++N S +EEED + E ++ S M+ K+ NG+
Sbjct: 452 ILFVIMVL----WRPSANNQRFAFSPLSEEEEEDEQKEPMLKESFEGMKMRSTKQEPNGN 507
>gi|62243734 signal transducing adaptor family member 2 isoform 1
[Homo sapiens]
Length = 449
Score = 40.8 bits (94), Expect = 0.004
Identities = 20/27 (74%), Positives = 20/27 (74%)
Query: 457 HHFAQADLELLASSCPPASVSQRAGIT 483
HH AQA LELL SS PP S SQ AGIT
Sbjct: 363 HHVAQAGLELLTSSDPPTSASQSAGIT 389
>gi|54112407 protein kinase CHK2 isoform c [Homo sapiens]
Length = 586
Score = 40.0 bits (92), Expect = 0.006
Identities = 21/33 (63%), Positives = 22/33 (66%)
Query: 450 AGSRIESHHFAQADLELLASSCPPASVSQRAGI 482
A ES H Q+DLELL SS PPAS SQ AGI
Sbjct: 104 ANLETESGHVTQSDLELLLSSDPPASASQSAGI 136
>gi|29029530 sulfotransferase family, cytosolic, 1C, member 1
isoform b [Homo sapiens]
Length = 307
Score = 39.7 bits (91), Expect = 0.008
Identities = 26/61 (42%), Positives = 34/61 (55%), Gaps = 7/61 (11%)
Query: 457 HHFAQADLELLASSCPPASVSQRAGITAAI-------NLAKLKLFRHYYVLIVCYIYFTR 509
HH AQA L+LL+SS PPAS SQ A IT + N L + R+ +V Y +F R
Sbjct: 97 HHVAQAGLKLLSSSNPPASTSQSAKITDLLPPSFWENNCKFLYVARNAKDCMVSYYHFQR 156
Query: 510 I 510
+
Sbjct: 157 M 157
>gi|119964690 glycogenin 2 isoform b [Homo sapiens]
Length = 501
Score = 37.7 bits (86), Expect = 0.030
Identities = 20/32 (62%), Positives = 21/32 (65%)
Query: 452 SRIESHHFAQADLELLASSCPPASVSQRAGIT 483
S E HH AQA LELL SS P S SQ AG+T
Sbjct: 2 SETEFHHGAQAGLELLRSSNSPTSASQSAGMT 33
>gi|169213800 PREDICTED: hypothetical protein [Homo sapiens]
Length = 142
Score = 36.2 bits (82), Expect = 0.089
Identities = 19/36 (52%), Positives = 22/36 (61%)
Query: 457 HHFAQADLELLASSCPPASVSQRAGITAAINLAKLK 492
+H QA LELL SS PP S SQ A IT + A+ K
Sbjct: 4 YHVGQAGLELLTSSDPPTSASQNAEITGVSHRAQSK 39
>gi|169214229 PREDICTED: hypothetical protein [Homo sapiens]
Length = 142
Score = 36.2 bits (82), Expect = 0.089
Identities = 19/36 (52%), Positives = 22/36 (61%)
Query: 457 HHFAQADLELLASSCPPASVSQRAGITAAINLAKLK 492
+H QA LELL SS PP S SQ A IT + A+ K
Sbjct: 4 YHVGQAGLELLTSSDPPTSASQNAEITGVSHRAQSK 39
>gi|169213573 PREDICTED: hypothetical protein [Homo sapiens]
Length = 142
Score = 36.2 bits (82), Expect = 0.089
Identities = 19/36 (52%), Positives = 22/36 (61%)
Query: 457 HHFAQADLELLASSCPPASVSQRAGITAAINLAKLK 492
+H QA LELL SS PP S SQ A IT + A+ K
Sbjct: 4 YHVGQAGLELLTSSDPPTSASQNAEITGVSHRAQSK 39
>gi|194473995 zinc finger protein 195 isoform 2 [Homo sapiens]
Length = 606
Score = 36.2 bits (82), Expect = 0.089
Identities = 20/34 (58%), Positives = 22/34 (64%)
Query: 457 HHFAQADLELLASSCPPASVSQRAGITAAINLAK 490
HH QA LELL SS PAS SQ AGIT + A+
Sbjct: 80 HHATQACLELLGSSDLPASASQSAGITGVNHRAQ 113
>gi|194473688 zinc finger protein 195 isoform 1 [Homo sapiens]
Length = 629
Score = 36.2 bits (82), Expect = 0.089
Identities = 20/34 (58%), Positives = 22/34 (64%)
Query: 457 HHFAQADLELLASSCPPASVSQRAGITAAINLAK 490
HH QA LELL SS PAS SQ AGIT + A+
Sbjct: 80 HHATQACLELLGSSDLPASASQSAGITGVNHRAQ 113
>gi|237858668 hypothetical protein LOC123207 isoform d [Homo
sapiens]
Length = 167
Score = 35.4 bits (80), Expect = 0.15
Identities = 20/28 (71%), Positives = 21/28 (75%)
Query: 456 SHHFAQADLELLASSCPPASVSQRAGIT 483
S + AQA LELLASS PAS SQ AGIT
Sbjct: 125 SCYIAQAGLELLASSDLPASASQSAGIT 152
>gi|217035093 cyclic nucleotide gated channel alpha 1 isoform 1
[Homo sapiens]
Length = 759
Score = 35.0 bits (79), Expect = 0.20
Identities = 18/27 (66%), Positives = 18/27 (66%)
Query: 457 HHFAQADLELLASSCPPASVSQRAGIT 483
HH QA LELL SS P S SQ AGIT
Sbjct: 42 HHVGQAGLELLISSDLPTSASQSAGIT 68
>gi|239747074 PREDICTED: hypothetical protein XP_002343911 [Homo
sapiens]
Length = 402
Score = 35.0 bits (79), Expect = 0.20
Identities = 18/33 (54%), Positives = 20/33 (60%)
Query: 458 HFAQADLELLASSCPPASVSQRAGITAAINLAK 490
H QA LELL S PP S SQ AGIT + A+
Sbjct: 360 HVDQAGLELLISGDPPTSASQSAGITGVTHWAR 392
>gi|169216761 PREDICTED: hCG_1742852 [Homo sapiens]
Length = 402
Score = 35.0 bits (79), Expect = 0.20
Identities = 18/33 (54%), Positives = 20/33 (60%)
Query: 458 HFAQADLELLASSCPPASVSQRAGITAAINLAK 490
H QA LELL S PP S SQ AGIT + A+
Sbjct: 360 HVDQAGLELLISGDPPTSASQSAGITGVTHWAR 392
>gi|169216486 PREDICTED: hCG_1742852 [Homo sapiens]
Length = 402
Score = 34.7 bits (78), Expect = 0.26
Identities = 18/33 (54%), Positives = 20/33 (60%)
Query: 458 HFAQADLELLASSCPPASVSQRAGITAAINLAK 490
H QA LELL S PP S SQ AGIT + A+
Sbjct: 360 HVDQAGLELLISGDPPTSASQSAGITGVSHWAR 392
>gi|169216528 PREDICTED: hCG_1742852 [Homo sapiens]
Length = 402
Score = 34.7 bits (78), Expect = 0.26
Identities = 18/33 (54%), Positives = 20/33 (60%)
Query: 458 HFAQADLELLASSCPPASVSQRAGITAAINLAK 490
H QA LELL S PP S SQ AGIT + A+
Sbjct: 360 HVDQAGLELLISGDPPTSASQSAGITGVSHWAR 392
>gi|195963398 suppressor of G2 allele of SKP1 isoform a [Homo
sapiens]
Length = 365
Score = 34.7 bits (78), Expect = 0.26
Identities = 18/29 (62%), Positives = 19/29 (65%)
Query: 457 HHFAQADLELLASSCPPASVSQRAGITAA 485
H QA L+LL SS PPA SQ AGIT A
Sbjct: 115 HRVGQAGLQLLTSSDPPALDSQSAGITGA 143
>gi|239751420 PREDICTED: similar to hCG2039376 [Homo sapiens]
Length = 858
Score = 34.3 bits (77), Expect = 0.34
Identities = 23/46 (50%), Positives = 26/46 (56%), Gaps = 3/46 (6%)
Query: 460 AQADLELLASSCPPASVSQRAGITAAIN---LAKLKLFRHYYVLIV 502
AQA LELL SS P A SQ AGIT + L L LF Y L++
Sbjct: 702 AQAGLELLVSSSPSALASQSAGITGMSHCTWLVVLFLFDFYCSLLI 747
>gi|61744477 solute carrier family 3, member 2 isoform b [Homo
sapiens]
Length = 631
Score = 34.3 bits (77), Expect = 0.34
Identities = 16/31 (51%), Positives = 20/31 (64%)
Query: 457 HHFAQADLELLASSCPPASVSQRAGITAAIN 487
HH +QAD+E L S P AS S AGIT ++
Sbjct: 74 HHVSQADIEFLTSIDPTASASGSAGITGTMS 104
>gi|61744475 solute carrier family 3, member 2 isoform a [Homo
sapiens]
Length = 661
Score = 34.3 bits (77), Expect = 0.34
Identities = 16/31 (51%), Positives = 20/31 (64%)
Query: 457 HHFAQADLELLASSCPPASVSQRAGITAAIN 487
HH +QAD+E L S P AS S AGIT ++
Sbjct: 104 HHVSQADIEFLTSIDPTASASGSAGITGTMS 134
>gi|66277202 podocalyxin-like isoform 1 precursor [Homo sapiens]
Length = 558
Score = 33.9 bits (76), Expect = 0.44
Identities = 17/29 (58%), Positives = 19/29 (65%)
Query: 457 HHFAQADLELLASSCPPASVSQRAGITAA 485
HH +QA LELL S P SQ AGITA+
Sbjct: 241 HHVSQAGLELLTSGDLPTLASQSAGITAS 269
>gi|224494572 hypothetical protein LOC401082 [Homo sapiens]
Length = 95
Score = 32.7 bits (73), Expect = 0.98
Identities = 17/28 (60%), Positives = 18/28 (64%)
Query: 456 SHHFAQADLELLASSCPPASVSQRAGIT 483
SH+ AQA LELL SS P S Q AG T
Sbjct: 17 SHYVAQAGLELLGSSNSPTSAYQAAGTT 44
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.321 0.137 0.408
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,050,313
Number of Sequences: 37866
Number of extensions: 962894
Number of successful extensions: 2526
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 2466
Number of HSP's gapped (non-prelim): 58
length of query: 600
length of database: 18,247,518
effective HSP length: 108
effective length of query: 492
effective length of database: 14,157,990
effective search space: 6965731080
effective search space used: 6965731080
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.