Guide to the Human Genome
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Name: GPR107 Sequence: fasta or formatted (571aa) NCBI GI: 211971060
Description:

G protein-coupled receptor 107 isoform 2

Referenced in:

G-Protein-coupled Receptors

Other entries for this name:
alt prot [600aa] G protein-coupled receptor 107 isoform 1
alt prot [552aa] G protein-coupled receptor 107 isoform 3
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.5         37           2
 C cysteine            0.9          5           2
 D aspartate           5.1         29           2
 E glutamate           5.3         30           3
 F phenylalanine       6.0         34           4
 G glycine             6.8         39           2
 H histidine           2.5         14           2
 I isoleucine          6.7         38           3
 K lysine              6.8         39           2
 L leucine            12.3         70           2
 M methionine          1.9         11           1
 N asparagine          3.2         18           2
 P proline             4.2         24           2
 Q glutamine           3.5         20           2
 R arginine            3.5         20           2
 S serine              8.2         47           2
 T threonine           4.7         27           2
 V valine              7.0         40           2
 W tryptophan          1.6          9           1
 Y tyrosine            3.5         20           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   G protein-coupled receptor 107 isoform 2 
GPR107                0.987   G protein-coupled receptor 107 isoform 1 
GPR107                0.957   G protein-coupled receptor 107 isoform 3 
GPR108                0.430   G protein-coupled receptor 108 isoform 1 
GPR108                0.359   G protein-coupled receptor 108 isoform 2 
TMEM87B               0.034   transmembrane protein 87B 
TMEM87A               0.025   transmembrane protein 87A isoform 1 
GRAMD1B               0.006   GRAM domain containing 1B 
CNIH3                 0.006   cornichon homolog 3 
LOC100293112          0.005   PREDICTED: hypothetical protein 
LOC100288817          0.005   PREDICTED: hypothetical protein 
LOC100288817          0.005   PREDICTED: hypothetical protein XP_002343307 
DDX25                 0.005   DEAD (Asp-Glu-Ala-Asp) box polypeptide 25 
CFDP1                 0.005   craniofacial development protein 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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