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Search of human proteins with 210147552
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|210147552 O-linked mannose
beta1,2-N-acetylglucosaminyltransferase [Homo sapiens]
(660 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|210147552 O-linked mannose beta1,2-N-acetylglucosaminyltransf... 1365 0.0
gi|167857786 mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acety... 138 1e-32
gi|167857784 mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acety... 138 1e-32
gi|167857782 mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acety... 138 1e-32
gi|167857780 mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acety... 138 1e-32
gi|167857778 mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acety... 138 1e-32
gi|38638698 KIAA1199 [Homo sapiens] 67 4e-11
gi|46255032 family with sequence similarity 3, member B isoform ... 64 3e-10
gi|46255030 family with sequence similarity 3, member B isoform ... 64 3e-10
gi|91807125 family with sequence similarity 3, member C precurso... 62 2e-09
gi|7661714 family with sequence similarity 3, member C precursor... 62 2e-09
gi|20270363 family with sequence similarity 3, member D [Homo sa... 61 4e-09
gi|13324682 family 3, member A protein [Homo sapiens] 52 2e-06
gi|209447096 transmembrane protein 2 isoform b [Homo sapiens] 49 1e-05
gi|7019555 transmembrane protein 2 isoform a [Homo sapiens] 49 1e-05
gi|50659082 suppressor of variegation 4-20 homolog 1 isoform 1 [... 32 2.4
gi|71043966 endonuclease/exonuclease/phosphatase family domain c... 32 2.4
gi|29788778 proline rich membrane anchor 1 precursor [Homo sapiens] 31 3.2
gi|26051278 nuclear pore membrane protein 121 [Homo sapiens] 31 3.2
gi|28329422 acute myelogenous leukemia 1 translocation 1 protein... 31 4.2
gi|28329419 acute myelogenous leukemia 1 translocation 1 protein... 31 4.2
gi|28329416 acute myelogenous leukemia 1 translocation 1 protein... 31 4.2
gi|4757916 acute myelogenous leukemia 1 translocation 1 protein ... 31 4.2
gi|6912492 mitogen-activated protein kinase 8 interacting protei... 30 5.4
gi|7706537 mitogen-activated protein kinase 8 interacting protei... 30 5.4
gi|41281808 harmonin isoform b3 [Homo sapiens] 30 7.1
gi|215820619 zinc finger protein 646 [Homo sapiens] 30 7.1
gi|110624774 mannose receptor, C type 2 [Homo sapiens] 30 7.1
gi|11034811 catenin (cadherin-associated protein), delta 2 (neur... 30 9.3
gi|148762958 D4, zinc and double PHD fingers, family 3 [Homo sap... 30 9.3
>gi|210147552 O-linked mannose
beta1,2-N-acetylglucosaminyltransferase [Homo sapiens]
Length = 660
Score = 1365 bits (3532), Expect = 0.0
Identities = 660/660 (100%), Positives = 660/660 (100%)
Query: 1 MDDWKPSPLIKPFGARKKRSWYLTWKYKLTNQRALRRFCQTGAVLFLLVTVIVNIKLILD 60
MDDWKPSPLIKPFGARKKRSWYLTWKYKLTNQRALRRFCQTGAVLFLLVTVIVNIKLILD
Sbjct: 1 MDDWKPSPLIKPFGARKKRSWYLTWKYKLTNQRALRRFCQTGAVLFLLVTVIVNIKLILD 60
Query: 61 TRRAISEANEDPEPEQDYDEALGRLEPPRRRGSGPRRVLDVEVYSSRSKVYVAVDGTTVL 120
TRRAISEANEDPEPEQDYDEALGRLEPPRRRGSGPRRVLDVEVYSSRSKVYVAVDGTTVL
Sbjct: 61 TRRAISEANEDPEPEQDYDEALGRLEPPRRRGSGPRRVLDVEVYSSRSKVYVAVDGTTVL 120
Query: 121 EDEAREQGRGIHVIVLNQATGHVMAKRVFDTYSPHEDEAMVLFLNMVAPGRVLICTVKDE 180
EDEAREQGRGIHVIVLNQATGHVMAKRVFDTYSPHEDEAMVLFLNMVAPGRVLICTVKDE
Sbjct: 121 EDEAREQGRGIHVIVLNQATGHVMAKRVFDTYSPHEDEAMVLFLNMVAPGRVLICTVKDE 180
Query: 181 GSFHLKDTAKALLRSLGSQAGPALGWRDTWAFVGRKGGPVFGEKHSKSPALSSWGDPVLL 240
GSFHLKDTAKALLRSLGSQAGPALGWRDTWAFVGRKGGPVFGEKHSKSPALSSWGDPVLL
Sbjct: 181 GSFHLKDTAKALLRSLGSQAGPALGWRDTWAFVGRKGGPVFGEKHSKSPALSSWGDPVLL 240
Query: 241 KTDVPLSSAEEAECHWADTELNRRRRRFCSKVEGYGSVCSCKDPTPIEFSPDPLPDNKVL 300
KTDVPLSSAEEAECHWADTELNRRRRRFCSKVEGYGSVCSCKDPTPIEFSPDPLPDNKVL
Sbjct: 241 KTDVPLSSAEEAECHWADTELNRRRRRFCSKVEGYGSVCSCKDPTPIEFSPDPLPDNKVL 300
Query: 301 NVPVAVIAGNRPNYLYRMLRSLLSAQGVSPQMITVFIDGYYEEPMDVVALFGLRGIQHTP 360
NVPVAVIAGNRPNYLYRMLRSLLSAQGVSPQMITVFIDGYYEEPMDVVALFGLRGIQHTP
Sbjct: 301 NVPVAVIAGNRPNYLYRMLRSLLSAQGVSPQMITVFIDGYYEEPMDVVALFGLRGIQHTP 360
Query: 361 ISIKNARVSQHYKASLTATFNLFPEAKFAVVLEEDLDIAVDFFSFLSQSIHLLEEDDSLY 420
ISIKNARVSQHYKASLTATFNLFPEAKFAVVLEEDLDIAVDFFSFLSQSIHLLEEDDSLY
Sbjct: 361 ISIKNARVSQHYKASLTATFNLFPEAKFAVVLEEDLDIAVDFFSFLSQSIHLLEEDDSLY 420
Query: 421 CISAWNDQGYEHTAEDPALLYRVETMPGLGWVLRRSLYKEELEPKWPTPEKLWDWDMWMR 480
CISAWNDQGYEHTAEDPALLYRVETMPGLGWVLRRSLYKEELEPKWPTPEKLWDWDMWMR
Sbjct: 421 CISAWNDQGYEHTAEDPALLYRVETMPGLGWVLRRSLYKEELEPKWPTPEKLWDWDMWMR 480
Query: 481 MPEQRRGRECIIPDVSRSYHFGIVGLNMNGYFHEAYFKKHKFNTVPGVQLRNVDSLKKEA 540
MPEQRRGRECIIPDVSRSYHFGIVGLNMNGYFHEAYFKKHKFNTVPGVQLRNVDSLKKEA
Sbjct: 481 MPEQRRGRECIIPDVSRSYHFGIVGLNMNGYFHEAYFKKHKFNTVPGVQLRNVDSLKKEA 540
Query: 541 YEVEVHRLLSEAEVLDHSKNPCEDSFLPDTEGHTYVAFIRMEKDDDFTTWTQLAKCLHIW 600
YEVEVHRLLSEAEVLDHSKNPCEDSFLPDTEGHTYVAFIRMEKDDDFTTWTQLAKCLHIW
Sbjct: 541 YEVEVHRLLSEAEVLDHSKNPCEDSFLPDTEGHTYVAFIRMEKDDDFTTWTQLAKCLHIW 600
Query: 601 DLDVRGNHRGLWRLFRKKNHFLVVGVPASPYSVKKPPSVTPIFLEPPPKEEGAPGAPEQT 660
DLDVRGNHRGLWRLFRKKNHFLVVGVPASPYSVKKPPSVTPIFLEPPPKEEGAPGAPEQT
Sbjct: 601 DLDVRGNHRGLWRLFRKKNHFLVVGVPASPYSVKKPPSVTPIFLEPPPKEEGAPGAPEQT 660
>gi|167857786 mannosyl (alpha-1,3-)-glycoprotein
beta-1,2-N-acetylglucosaminyltransferase [Homo sapiens]
Length = 445
Score = 138 bits (348), Expect = 1e-32
Identities = 117/340 (34%), Positives = 172/340 (50%), Gaps = 44/340 (12%)
Query: 227 KSPALSSW-GDPVLLKTDVPLSSAEEAECHWADTELNRRRRRFCSKVEGY----GSVCSC 281
+ P++S+ GDP L +V + A++AE EL R+R + G V +
Sbjct: 36 RPPSVSALDGDPASLTREV-IRLAQDAE-----VELERQRGLLQQIGDALSSQRGRVPTA 89
Query: 282 KDPTPIEFSPDPLPDNKVLNVPVAVIAGNRPNYLYRMLRSLLSAQGVSPQMITVFI--DG 339
P P P +P+ VIA +R + R L LL + S ++ + + D
Sbjct: 90 APPAQPRVPVTPAP----AVIPILVIACDRST-VRRCLDKLLHYRP-SAELFPIIVSQDC 143
Query: 340 YYEEPMDVVALFG----------LRGIQHTPISIKNA---RVSQHYKASLTATFNLFPEA 386
+EE +A +G L I P K ++++HY+ +L F F
Sbjct: 144 GHEETAQAIASYGSAVTHIRQPDLSSIAVPPDHRKFQGYYKIARHYRWALGQVFRQF-RF 202
Query: 387 KFAVVLEEDLDIAVDFFSFLSQSIHLLEEDDSLYCISAWNDQGYEH--TAEDPALLYRVE 444
AVV+E+DL++A DFF + + LL+ D SL+C+SAWND G E A P LLYR +
Sbjct: 203 PAAVVVEDDLEVAPDFFEYFRATYPLLKADPSLWCVSAWNDNGKEQMVDASRPELLYRTD 262
Query: 445 TMPGLGWVLRRSLYKEELEPKWPTPEKLWDWDMWMRMPEQRRGRECIIPDVSRSYHFGIV 504
PGLGW+L L+ ELEPKWP WD WMR PEQR+GR CI P++SR+ FG
Sbjct: 263 FFPGLGWLLLAELW-AELEPKWPKA----FWDDWMRRPEQRQGRACIRPEISRTMTFGRK 317
Query: 505 GLNMNGYFHEAYFKKHKFNT--VPGVQLRNVDSLKKEAYE 542
G++ +G F + + K K N V QL ++ L++EAY+
Sbjct: 318 GVS-HGQFFDQHLKFIKLNQQFVHFTQL-DLSYLQREAYD 355
>gi|167857784 mannosyl (alpha-1,3-)-glycoprotein
beta-1,2-N-acetylglucosaminyltransferase [Homo sapiens]
Length = 445
Score = 138 bits (348), Expect = 1e-32
Identities = 117/340 (34%), Positives = 172/340 (50%), Gaps = 44/340 (12%)
Query: 227 KSPALSSW-GDPVLLKTDVPLSSAEEAECHWADTELNRRRRRFCSKVEGY----GSVCSC 281
+ P++S+ GDP L +V + A++AE EL R+R + G V +
Sbjct: 36 RPPSVSALDGDPASLTREV-IRLAQDAE-----VELERQRGLLQQIGDALSSQRGRVPTA 89
Query: 282 KDPTPIEFSPDPLPDNKVLNVPVAVIAGNRPNYLYRMLRSLLSAQGVSPQMITVFI--DG 339
P P P +P+ VIA +R + R L LL + S ++ + + D
Sbjct: 90 APPAQPRVPVTPAP----AVIPILVIACDRST-VRRCLDKLLHYRP-SAELFPIIVSQDC 143
Query: 340 YYEEPMDVVALFG----------LRGIQHTPISIKNA---RVSQHYKASLTATFNLFPEA 386
+EE +A +G L I P K ++++HY+ +L F F
Sbjct: 144 GHEETAQAIASYGSAVTHIRQPDLSSIAVPPDHRKFQGYYKIARHYRWALGQVFRQF-RF 202
Query: 387 KFAVVLEEDLDIAVDFFSFLSQSIHLLEEDDSLYCISAWNDQGYEH--TAEDPALLYRVE 444
AVV+E+DL++A DFF + + LL+ D SL+C+SAWND G E A P LLYR +
Sbjct: 203 PAAVVVEDDLEVAPDFFEYFRATYPLLKADPSLWCVSAWNDNGKEQMVDASRPELLYRTD 262
Query: 445 TMPGLGWVLRRSLYKEELEPKWPTPEKLWDWDMWMRMPEQRRGRECIIPDVSRSYHFGIV 504
PGLGW+L L+ ELEPKWP WD WMR PEQR+GR CI P++SR+ FG
Sbjct: 263 FFPGLGWLLLAELW-AELEPKWPKA----FWDDWMRRPEQRQGRACIRPEISRTMTFGRK 317
Query: 505 GLNMNGYFHEAYFKKHKFNT--VPGVQLRNVDSLKKEAYE 542
G++ +G F + + K K N V QL ++ L++EAY+
Sbjct: 318 GVS-HGQFFDQHLKFIKLNQQFVHFTQL-DLSYLQREAYD 355
>gi|167857782 mannosyl (alpha-1,3-)-glycoprotein
beta-1,2-N-acetylglucosaminyltransferase [Homo sapiens]
Length = 445
Score = 138 bits (348), Expect = 1e-32
Identities = 117/340 (34%), Positives = 172/340 (50%), Gaps = 44/340 (12%)
Query: 227 KSPALSSW-GDPVLLKTDVPLSSAEEAECHWADTELNRRRRRFCSKVEGY----GSVCSC 281
+ P++S+ GDP L +V + A++AE EL R+R + G V +
Sbjct: 36 RPPSVSALDGDPASLTREV-IRLAQDAE-----VELERQRGLLQQIGDALSSQRGRVPTA 89
Query: 282 KDPTPIEFSPDPLPDNKVLNVPVAVIAGNRPNYLYRMLRSLLSAQGVSPQMITVFI--DG 339
P P P +P+ VIA +R + R L LL + S ++ + + D
Sbjct: 90 APPAQPRVPVTPAP----AVIPILVIACDRST-VRRCLDKLLHYRP-SAELFPIIVSQDC 143
Query: 340 YYEEPMDVVALFG----------LRGIQHTPISIKNA---RVSQHYKASLTATFNLFPEA 386
+EE +A +G L I P K ++++HY+ +L F F
Sbjct: 144 GHEETAQAIASYGSAVTHIRQPDLSSIAVPPDHRKFQGYYKIARHYRWALGQVFRQF-RF 202
Query: 387 KFAVVLEEDLDIAVDFFSFLSQSIHLLEEDDSLYCISAWNDQGYEH--TAEDPALLYRVE 444
AVV+E+DL++A DFF + + LL+ D SL+C+SAWND G E A P LLYR +
Sbjct: 203 PAAVVVEDDLEVAPDFFEYFRATYPLLKADPSLWCVSAWNDNGKEQMVDASRPELLYRTD 262
Query: 445 TMPGLGWVLRRSLYKEELEPKWPTPEKLWDWDMWMRMPEQRRGRECIIPDVSRSYHFGIV 504
PGLGW+L L+ ELEPKWP WD WMR PEQR+GR CI P++SR+ FG
Sbjct: 263 FFPGLGWLLLAELW-AELEPKWPKA----FWDDWMRRPEQRQGRACIRPEISRTMTFGRK 317
Query: 505 GLNMNGYFHEAYFKKHKFNT--VPGVQLRNVDSLKKEAYE 542
G++ +G F + + K K N V QL ++ L++EAY+
Sbjct: 318 GVS-HGQFFDQHLKFIKLNQQFVHFTQL-DLSYLQREAYD 355
>gi|167857780 mannosyl (alpha-1,3-)-glycoprotein
beta-1,2-N-acetylglucosaminyltransferase [Homo sapiens]
Length = 445
Score = 138 bits (348), Expect = 1e-32
Identities = 117/340 (34%), Positives = 172/340 (50%), Gaps = 44/340 (12%)
Query: 227 KSPALSSW-GDPVLLKTDVPLSSAEEAECHWADTELNRRRRRFCSKVEGY----GSVCSC 281
+ P++S+ GDP L +V + A++AE EL R+R + G V +
Sbjct: 36 RPPSVSALDGDPASLTREV-IRLAQDAE-----VELERQRGLLQQIGDALSSQRGRVPTA 89
Query: 282 KDPTPIEFSPDPLPDNKVLNVPVAVIAGNRPNYLYRMLRSLLSAQGVSPQMITVFI--DG 339
P P P +P+ VIA +R + R L LL + S ++ + + D
Sbjct: 90 APPAQPRVPVTPAP----AVIPILVIACDRST-VRRCLDKLLHYRP-SAELFPIIVSQDC 143
Query: 340 YYEEPMDVVALFG----------LRGIQHTPISIKNA---RVSQHYKASLTATFNLFPEA 386
+EE +A +G L I P K ++++HY+ +L F F
Sbjct: 144 GHEETAQAIASYGSAVTHIRQPDLSSIAVPPDHRKFQGYYKIARHYRWALGQVFRQF-RF 202
Query: 387 KFAVVLEEDLDIAVDFFSFLSQSIHLLEEDDSLYCISAWNDQGYEH--TAEDPALLYRVE 444
AVV+E+DL++A DFF + + LL+ D SL+C+SAWND G E A P LLYR +
Sbjct: 203 PAAVVVEDDLEVAPDFFEYFRATYPLLKADPSLWCVSAWNDNGKEQMVDASRPELLYRTD 262
Query: 445 TMPGLGWVLRRSLYKEELEPKWPTPEKLWDWDMWMRMPEQRRGRECIIPDVSRSYHFGIV 504
PGLGW+L L+ ELEPKWP WD WMR PEQR+GR CI P++SR+ FG
Sbjct: 263 FFPGLGWLLLAELW-AELEPKWPKA----FWDDWMRRPEQRQGRACIRPEISRTMTFGRK 317
Query: 505 GLNMNGYFHEAYFKKHKFNT--VPGVQLRNVDSLKKEAYE 542
G++ +G F + + K K N V QL ++ L++EAY+
Sbjct: 318 GVS-HGQFFDQHLKFIKLNQQFVHFTQL-DLSYLQREAYD 355
>gi|167857778 mannosyl (alpha-1,3-)-glycoprotein
beta-1,2-N-acetylglucosaminyltransferase [Homo sapiens]
Length = 445
Score = 138 bits (348), Expect = 1e-32
Identities = 117/340 (34%), Positives = 172/340 (50%), Gaps = 44/340 (12%)
Query: 227 KSPALSSW-GDPVLLKTDVPLSSAEEAECHWADTELNRRRRRFCSKVEGY----GSVCSC 281
+ P++S+ GDP L +V + A++AE EL R+R + G V +
Sbjct: 36 RPPSVSALDGDPASLTREV-IRLAQDAE-----VELERQRGLLQQIGDALSSQRGRVPTA 89
Query: 282 KDPTPIEFSPDPLPDNKVLNVPVAVIAGNRPNYLYRMLRSLLSAQGVSPQMITVFI--DG 339
P P P +P+ VIA +R + R L LL + S ++ + + D
Sbjct: 90 APPAQPRVPVTPAP----AVIPILVIACDRST-VRRCLDKLLHYRP-SAELFPIIVSQDC 143
Query: 340 YYEEPMDVVALFG----------LRGIQHTPISIKNA---RVSQHYKASLTATFNLFPEA 386
+EE +A +G L I P K ++++HY+ +L F F
Sbjct: 144 GHEETAQAIASYGSAVTHIRQPDLSSIAVPPDHRKFQGYYKIARHYRWALGQVFRQF-RF 202
Query: 387 KFAVVLEEDLDIAVDFFSFLSQSIHLLEEDDSLYCISAWNDQGYEH--TAEDPALLYRVE 444
AVV+E+DL++A DFF + + LL+ D SL+C+SAWND G E A P LLYR +
Sbjct: 203 PAAVVVEDDLEVAPDFFEYFRATYPLLKADPSLWCVSAWNDNGKEQMVDASRPELLYRTD 262
Query: 445 TMPGLGWVLRRSLYKEELEPKWPTPEKLWDWDMWMRMPEQRRGRECIIPDVSRSYHFGIV 504
PGLGW+L L+ ELEPKWP WD WMR PEQR+GR CI P++SR+ FG
Sbjct: 263 FFPGLGWLLLAELW-AELEPKWPKA----FWDDWMRRPEQRQGRACIRPEISRTMTFGRK 317
Query: 505 GLNMNGYFHEAYFKKHKFNT--VPGVQLRNVDSLKKEAYE 542
G++ +G F + + K K N V QL ++ L++EAY+
Sbjct: 318 GVS-HGQFFDQHLKFIKLNQQFVHFTQL-DLSYLQREAYD 355
>gi|38638698 KIAA1199 [Homo sapiens]
Length = 1361
Score = 67.4 bits (163), Expect = 4e-11
Identities = 39/92 (42%), Positives = 54/92 (58%), Gaps = 1/92 (1%)
Query: 129 RGIHVIVLNQATGHVMAKRVFDTY-SPHEDEAMVLFLNMVAPGRVLICTVKDEGSFHLKD 187
RG+ V V++ +G V+ FDTY S E E +V +LN V GR+L V DEGS +L D
Sbjct: 187 RGVIVHVIDPKSGTVIHSDRFDTYRSKKESERLVQYLNAVPDGRILSVAVNDEGSRNLDD 246
Query: 188 TAKALLRSLGSQAGPALGWRDTWAFVGRKGGP 219
A+ + LGS+ LG+R W+F+ KG P
Sbjct: 247 MARKAMTKLGSKHFLHLGFRHPWSFLTVKGNP 278
>gi|46255032 family with sequence similarity 3, member B isoform b
[Homo sapiens]
Length = 187
Score = 64.3 bits (155), Expect = 3e-10
Identities = 31/106 (29%), Positives = 53/106 (50%)
Query: 112 VAVDGTTVLEDEAREQGRGIHVIVLNQATGHVMAKRVFDTYSPHEDEAMVLFLNMVAPGR 171
+ + ++ ++ RGI++ ++N TG+V A R FD Y M F+ AP
Sbjct: 42 ICFEDNLLMGEQLGNVARGINIAIVNYVTGNVTATRCFDMYEGDNSGPMTKFIQSAAPKS 101
Query: 172 VLICTVKDEGSFHLKDTAKALLRSLGSQAGPALGWRDTWAFVGRKG 217
+L D+GS L + AK + +LGS+ + +R +W F+ KG
Sbjct: 102 LLFMVTYDDGSTRLNNDAKNAIEALGSKEIRNMKFRSSWVFIAAKG 147
>gi|46255030 family with sequence similarity 3, member B isoform a
[Homo sapiens]
Length = 235
Score = 64.3 bits (155), Expect = 3e-10
Identities = 31/106 (29%), Positives = 53/106 (50%)
Query: 112 VAVDGTTVLEDEAREQGRGIHVIVLNQATGHVMAKRVFDTYSPHEDEAMVLFLNMVAPGR 171
+ + ++ ++ RGI++ ++N TG+V A R FD Y M F+ AP
Sbjct: 90 ICFEDNLLMGEQLGNVARGINIAIVNYVTGNVTATRCFDMYEGDNSGPMTKFIQSAAPKS 149
Query: 172 VLICTVKDEGSFHLKDTAKALLRSLGSQAGPALGWRDTWAFVGRKG 217
+L D+GS L + AK + +LGS+ + +R +W F+ KG
Sbjct: 150 LLFMVTYDDGSTRLNNDAKNAIEALGSKEIRNMKFRSSWVFIAAKG 195
>gi|91807125 family with sequence similarity 3, member C precursor
[Homo sapiens]
Length = 227
Score = 62.0 bits (149), Expect = 2e-09
Identities = 40/146 (27%), Positives = 69/146 (47%), Gaps = 8/146 (5%)
Query: 79 DEALGRLEPPRRR----GSGPRRVLDVEVYSSRSKVY---VAVDGTTVLEDEAREQGRGI 131
D A +PPR + + P + ++ S + V + ++ ++ GRGI
Sbjct: 45 DTAARSTKPPRYKCGISKACPEKHFAFKMASGAANVVGPKICLEDNVLMSGVKNNVGRGI 104
Query: 132 HVIVLNQATGHVMAKRVFDTYSPHEDEAMVLFLNMVAPGRVLICTVKDEGSFHLKDTAKA 191
+V + N TG V+ + FD + + + FL + G +++ D+G+ L D A+
Sbjct: 105 NVALANGKTGEVLDTKYFDMWGG-DVAPFIEFLKAIQDGTIVLMGTYDDGATKLNDEARR 163
Query: 192 LLRSLGSQAGPALGWRDTWAFVGRKG 217
L+ LGS + LG+RD W F G KG
Sbjct: 164 LIADLGSTSITNLGFRDNWVFCGGKG 189
>gi|7661714 family with sequence similarity 3, member C precursor
[Homo sapiens]
Length = 227
Score = 62.0 bits (149), Expect = 2e-09
Identities = 40/146 (27%), Positives = 69/146 (47%), Gaps = 8/146 (5%)
Query: 79 DEALGRLEPPRRR----GSGPRRVLDVEVYSSRSKVY---VAVDGTTVLEDEAREQGRGI 131
D A +PPR + + P + ++ S + V + ++ ++ GRGI
Sbjct: 45 DTAARSTKPPRYKCGISKACPEKHFAFKMASGAANVVGPKICLEDNVLMSGVKNNVGRGI 104
Query: 132 HVIVLNQATGHVMAKRVFDTYSPHEDEAMVLFLNMVAPGRVLICTVKDEGSFHLKDTAKA 191
+V + N TG V+ + FD + + + FL + G +++ D+G+ L D A+
Sbjct: 105 NVALANGKTGEVLDTKYFDMWGG-DVAPFIEFLKAIQDGTIVLMGTYDDGATKLNDEARR 163
Query: 192 LLRSLGSQAGPALGWRDTWAFVGRKG 217
L+ LGS + LG+RD W F G KG
Sbjct: 164 LIADLGSTSITNLGFRDNWVFCGGKG 189
>gi|20270363 family with sequence similarity 3, member D [Homo
sapiens]
Length = 224
Score = 60.8 bits (146), Expect = 4e-09
Identities = 37/120 (30%), Positives = 63/120 (52%), Gaps = 5/120 (4%)
Query: 128 GRGIHVIVLNQATGHVMAKRVFDTYSPHEDEAMVLFLNMVAPGRVLICTVKDEGSFHLKD 187
GRG+++ ++N TG V+ ++ FD YS + +V FL + G +++ D+ + D
Sbjct: 98 GRGLNIALVNGTTGAVLGQKAFDMYSG-DVMHLVKFLKEIPGGALVLVASYDDPGTKMND 156
Query: 188 TAKALLRSLGSQAGPALGWRDTWAFVGRK---GGPVFGEKHSKSPALSSW-GDPVLLKTD 243
++ L LGS LG+RD+W F+G K G F + SP + + G P LL+ +
Sbjct: 157 ESRKLFSDLGSSYAKQLGFRDSWVFIGAKDLRGKSPFEQFLKNSPDTNKYEGWPELLEME 216
>gi|13324682 family 3, member A protein [Homo sapiens]
Length = 230
Score = 52.0 bits (123), Expect = 2e-06
Identities = 24/90 (26%), Positives = 50/90 (55%), Gaps = 1/90 (1%)
Query: 128 GRGIHVIVLNQATGHVMAKRVFDTYSPHEDEAMVLFLNMVAPGRVLICTVKDEGSFHLKD 187
GRG+++ ++N +G ++ R FD ++ ++ ++ F+ + G ++ D+ + + +
Sbjct: 102 GRGLNIALVNGVSGELIEARAFDMWAGDVND-LLKFIRPLHEGTLVFVASYDDPATKMNE 160
Query: 188 TAKALLRSLGSQAGPALGWRDTWAFVGRKG 217
+ L LGS+ L +RD+W FVG KG
Sbjct: 161 ETRKLFSELGSRNAKELAFRDSWVFVGAKG 190
>gi|209447096 transmembrane protein 2 isoform b [Homo sapiens]
Length = 1320
Score = 49.3 bits (116), Expect = 1e-05
Identities = 29/92 (31%), Positives = 48/92 (52%), Gaps = 2/92 (2%)
Query: 125 REQGRGIHVIVLNQATGHVMAKRVFDTYS-PHEDEAMVLFLNMVAPGRVLICTVKDEGSF 183
++ RG++V V++Q T ++ FDT+ +E + FL PGR++ V D +
Sbjct: 261 KDFSRGLNVRVIDQDTAKILESERFDTHEYRNESRRLQEFLRFQDPGRIVAIAVGDSAAK 320
Query: 184 HL-KDTAKALLRSLGSQAGPALGWRDTWAFVG 214
L + T + + LGS+ LG+R WA VG
Sbjct: 321 SLLQGTIQMIQERLGSELIQGLGYRQAWALVG 352
>gi|7019555 transmembrane protein 2 isoform a [Homo sapiens]
Length = 1383
Score = 49.3 bits (116), Expect = 1e-05
Identities = 29/92 (31%), Positives = 48/92 (52%), Gaps = 2/92 (2%)
Query: 125 REQGRGIHVIVLNQATGHVMAKRVFDTYS-PHEDEAMVLFLNMVAPGRVLICTVKDEGSF 183
++ RG++V V++Q T ++ FDT+ +E + FL PGR++ V D +
Sbjct: 261 KDFSRGLNVRVIDQDTAKILESERFDTHEYRNESRRLQEFLRFQDPGRIVAIAVGDSAAK 320
Query: 184 HL-KDTAKALLRSLGSQAGPALGWRDTWAFVG 214
L + T + + LGS+ LG+R WA VG
Sbjct: 321 SLLQGTIQMIQERLGSELIQGLGYRQAWALVG 352
>gi|50659082 suppressor of variegation 4-20 homolog 1 isoform 1
[Homo sapiens]
Length = 885
Score = 31.6 bits (70), Expect = 2.4
Identities = 19/65 (29%), Positives = 38/65 (58%), Gaps = 8/65 (12%)
Query: 237 PVLLKTDVPLSSAE--EAECHWADTELNRRRRRFCSKVEGYGSVCSCKDPTPIEFSP--- 291
PVL + ++ +A+ EA+CH +DT +++++ R V+ + + ++ TP+ SP
Sbjct: 583 PVLQEEELAHETAQKGEAKCHKSDTGMSKKKSRQGKLVKQFAKI---EESTPVHDSPGKD 639
Query: 292 DPLPD 296
D +PD
Sbjct: 640 DAVPD 644
>gi|71043966 endonuclease/exonuclease/phosphatase family domain
containing 1 [Homo sapiens]
Length = 569
Score = 31.6 bits (70), Expect = 2.4
Identities = 34/150 (22%), Positives = 58/150 (38%), Gaps = 15/150 (10%)
Query: 259 TELNRRRRRFCSKVEGYGSVCSCKDPTPIEFSPDPLPDNKVLNVPVAVIAGNRPNYLYRM 318
T+L + + C +G S +P D L + + ++ AV R N
Sbjct: 89 TKLEQVKFEICVSSKG-----SSAQHSPSSLRRDLLAEQQPHHLATAVPLTPRVNINTAT 143
Query: 319 LRSLLSAQGVSPQMITVFID-----GYYEEPMDVVALFGLRG-----IQHTPISIKNARV 368
L+S +G+S +M +D G + D+V + G+ I+H + ++
Sbjct: 144 PAQLMSVRGLSEKMALSIVDFRREHGPFRSVEDLVRMDGINAAFLDRIRHQVFAERSRPP 203
Query: 369 SQHYKASLTATFNLFPEAKFAVVLEEDLDI 398
S H LT T P + EDLD+
Sbjct: 204 STHTNGGLTFTAKPHPSPTSLSLQSEDLDL 233
>gi|29788778 proline rich membrane anchor 1 precursor [Homo sapiens]
Length = 153
Score = 31.2 bits (69), Expect = 3.2
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Query: 266 RRFCSKV-EGYGSVCSCKDPTPIEFSPDPLPDNKVLNVP 303
++ CSKV + VC C+ P P+ P P P ++L+ P
Sbjct: 38 QKSCSKVTDSCRHVCQCRPPPPLPPPPPPPPPPRLLSAP 76
>gi|26051278 nuclear pore membrane protein 121 [Homo sapiens]
Length = 984
Score = 31.2 bits (69), Expect = 3.2
Identities = 13/31 (41%), Positives = 16/31 (51%)
Query: 627 PASPYSVKKPPSVTPIFLEPPPKEEGAPGAP 657
PA+P + PP PIF PP E+ P P
Sbjct: 451 PAAPAASSAPPMFKPIFTAPPKSEKEGPTPP 481
>gi|28329422 acute myelogenous leukemia 1 translocation 1 protein
isoform MTG8c [Homo sapiens]
Length = 567
Score = 30.8 bits (68), Expect = 4.2
Identities = 13/29 (44%), Positives = 17/29 (58%)
Query: 626 VPASPYSVKKPPSVTPIFLEPPPKEEGAP 654
+P SP VK +TP + PPP +GAP
Sbjct: 1 MPDSPVDVKTQSRLTPPTMPPPPTTQGAP 29
>gi|28329419 acute myelogenous leukemia 1 translocation 1 protein
isoform MTG8c [Homo sapiens]
Length = 567
Score = 30.8 bits (68), Expect = 4.2
Identities = 13/29 (44%), Positives = 17/29 (58%)
Query: 626 VPASPYSVKKPPSVTPIFLEPPPKEEGAP 654
+P SP VK +TP + PPP +GAP
Sbjct: 1 MPDSPVDVKTQSRLTPPTMPPPPTTQGAP 29
>gi|28329416 acute myelogenous leukemia 1 translocation 1 protein
isoform MTG8b [Homo sapiens]
Length = 604
Score = 30.8 bits (68), Expect = 4.2
Identities = 13/29 (44%), Positives = 17/29 (58%)
Query: 626 VPASPYSVKKPPSVTPIFLEPPPKEEGAP 654
+P SP VK +TP + PPP +GAP
Sbjct: 38 MPDSPVDVKTQSRLTPPTMPPPPTTQGAP 66
>gi|4757916 acute myelogenous leukemia 1 translocation 1 protein
isoform MTG8a [Homo sapiens]
Length = 577
Score = 30.8 bits (68), Expect = 4.2
Identities = 13/29 (44%), Positives = 17/29 (58%)
Query: 626 VPASPYSVKKPPSVTPIFLEPPPKEEGAP 654
+P SP VK +TP + PPP +GAP
Sbjct: 11 MPDSPVDVKTQSRLTPPTMPPPPTTQGAP 39
>gi|6912492 mitogen-activated protein kinase 8 interacting protein 2
isoform 1 [Homo sapiens]
Length = 824
Score = 30.4 bits (67), Expect = 5.4
Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 3/55 (5%)
Query: 67 EANEDPEPEQDYDEALGRLEPPRRRGSGPRRVLDVEVYSSRSKVYVAVDGTTVLE 121
E ED E E+D +++ G P RG+GP D + K + VD T LE
Sbjct: 471 EDEEDDEEEEDAEDSAGS---PGGRGTGPSAPRDASLVYDAVKYTLVVDEHTQLE 522
>gi|7706537 mitogen-activated protein kinase 8 interacting protein 2
isoform 2 [Homo sapiens]
Length = 797
Score = 30.4 bits (67), Expect = 5.4
Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 3/55 (5%)
Query: 67 EANEDPEPEQDYDEALGRLEPPRRRGSGPRRVLDVEVYSSRSKVYVAVDGTTVLE 121
E ED E E+D +++ G P RG+GP D + K + VD T LE
Sbjct: 444 EDEEDDEEEEDAEDSAGS---PGGRGTGPSAPRDASLVYDAVKYTLVVDEHTQLE 495
>gi|41281808 harmonin isoform b3 [Homo sapiens]
Length = 899
Score = 30.0 bits (66), Expect = 7.1
Identities = 23/76 (30%), Positives = 36/76 (47%), Gaps = 8/76 (10%)
Query: 284 PTPIEFSPDPLPDNK--VLNVPVAVIAGNRPNYLYR-MLRSLLSAQGVSPQMI---TVFI 337
PTP F P P P V + V+ PN++YR ++S + Q + +M+ T F
Sbjct: 668 PTPKTFCPSPQPPRGPGVSTISKPVMVHQEPNFIYRPAVKSEVLPQEMLKRMVVYQTAFR 727
Query: 338 DGY--YEEPMDVVALF 351
+ YEE D ++F
Sbjct: 728 QDFRKYEEGFDPYSMF 743
>gi|215820619 zinc finger protein 646 [Homo sapiens]
Length = 1832
Score = 30.0 bits (66), Expect = 7.1
Identities = 21/77 (27%), Positives = 35/77 (45%), Gaps = 9/77 (11%)
Query: 187 DTAKALLRSLGSQAGPALGWRDTWAFVGRKGG-PVFGEKHSKSPALSSWGDPVLLKTDVP 245
+ +++ +R+ S+A L W G+ GG PV G + S W L +++ P
Sbjct: 1438 ERSQSPIRAASSEAPEPLSWG-----AGKAGGWPVGGGLGNHS---GGWVPQFLTRSEEP 1489
Query: 246 LSSAEEAECHWADTELN 262
S + CH D +LN
Sbjct: 1490 EDSVHRSPCHAGDCQLN 1506
>gi|110624774 mannose receptor, C type 2 [Homo sapiens]
Length = 1479
Score = 30.0 bits (66), Expect = 7.1
Identities = 24/89 (26%), Positives = 38/89 (42%), Gaps = 7/89 (7%)
Query: 216 KGGPVFGEKHSKSPALSSWGDPVLLKTDVPLSSAEEAECHWADTELNRRRRRFCSKVEGY 275
KGG + + ++ + S+WG P L + + +S C+W + R C+ +
Sbjct: 1337 KGGTLVWQDNT-AVNYSNWGPPGLGPSMLSHNS-----CYWIQSNSGLWRPGACTNIT-M 1389
Query: 276 GSVCSCKDPTPIEFSPDPLPDNKVLNVPV 304
G VC FSP LP+N V V
Sbjct: 1390 GVVCKLPRAEQSSFSPSALPENPAALVVV 1418
>gi|11034811 catenin (cadherin-associated protein), delta 2 (neural
plakophilin-related arm-repeat protein) [Homo sapiens]
Length = 1225
Score = 29.6 bits (65), Expect = 9.3
Identities = 10/30 (33%), Positives = 18/30 (60%)
Query: 630 PYSVKKPPSVTPIFLEPPPKEEGAPGAPEQ 659
PYS + PS++P+ + P + AP +P +
Sbjct: 1050 PYSSSRTPSISPVRVSPNNRSASAPASPRE 1079
>gi|148762958 D4, zinc and double PHD fingers, family 3 [Homo
sapiens]
Length = 357
Score = 29.6 bits (65), Expect = 9.3
Identities = 17/61 (27%), Positives = 26/61 (42%)
Query: 52 IVNIKLILDTRRAISEANEDPEPEQDYDEALGRLEPPRRRGSGPRRVLDVEVYSSRSKVY 111
I I+ +L+ + E NE+ + E+D + R R +G RR D K Y
Sbjct: 139 IQEIQRVLENDENVEEGNEEEDLEEDIPKRKNRTRGRARGSAGGRRRHDAASQEDHDKPY 198
Query: 112 V 112
V
Sbjct: 199 V 199
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.320 0.137 0.429
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 29,006,674
Number of Sequences: 37866
Number of extensions: 1426562
Number of successful extensions: 3995
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 3953
Number of HSP's gapped (non-prelim): 31
length of query: 660
length of database: 18,247,518
effective HSP length: 109
effective length of query: 551
effective length of database: 14,120,124
effective search space: 7780188324
effective search space used: 7780188324
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.