Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 209870059
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|209870059 hypothetical protein LOC120376 [Homo sapiens]
(154 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|209870059 hypothetical protein LOC120376 [Homo sapiens] 330 2e-91
gi|242117971 RNA binding motif protein, X-linked-like 1 [Homo sa... 30 0.63
gi|21361809 RNA binding motif protein, X-linked-like 1 [Homo sap... 30 0.63
gi|56699409 RNA binding motif protein, X-linked [Homo sapiens] 30 0.63
gi|36030946 LOC90806 protein [Homo sapiens] 30 0.63
gi|110349788 absent, small, or homeotic 1-like [Homo sapiens] 30 0.82
gi|119220552 sidekick 1 [Homo sapiens] 30 1.1
gi|188497758 ubiquitin associated protein 2-like isoform a [Homo... 30 1.1
gi|188497756 ubiquitin associated protein 2-like isoform b [Homo... 30 1.1
gi|22325364 ubiquitin associated protein 2 [Homo sapiens] 30 1.1
gi|239755326 PREDICTED: hypothetical protein [Homo sapiens] 29 1.8
gi|239754542 PREDICTED: hypothetical protein [Homo sapiens] 29 1.8
gi|239749107 PREDICTED: hypothetical protein XP_002346912 [Homo ... 29 1.8
gi|239744133 PREDICTED: hypothetical protein [Homo sapiens] 29 1.8
gi|239743136 PREDICTED: hypothetical protein XP_002342759 [Homo ... 29 1.8
gi|239508794 PREDICTED: hypothetical protein [Homo sapiens] 29 1.8
gi|4505939 DNA-directed RNA polymerase II A [Homo sapiens] 29 1.8
gi|55741677 SET domain containing 1A [Homo sapiens] 29 1.8
gi|10863935 reticulon 1 isoform A [Homo sapiens] 29 1.8
gi|6005830 plakophilin 3 [Homo sapiens] 29 1.8
gi|66529407 tensin [Homo sapiens] 28 2.4
gi|58530876 melanoma antigen family C, 1 [Homo sapiens] 28 2.4
gi|150378543 MYST histone acetyltransferase (monocytic leukemia)... 28 2.4
gi|150378463 MYST histone acetyltransferase (monocytic leukemia)... 28 2.4
gi|150378493 MYST histone acetyltransferase (monocytic leukemia)... 28 2.4
gi|9955937 acrosomal vesicle protein 1 isoform f precursor [Homo... 28 2.4
gi|148236531 hypothetical protein LOC339779 [Homo sapiens] 28 2.4
gi|66932988 filamin-binding LIM protein-1 isoform c [Homo sapiens] 28 4.1
gi|66932982 filamin-binding LIM protein-1 isoform a [Homo sapiens] 28 4.1
gi|9966885 tumor endothelial marker 1 precursor [Homo sapiens] 28 4.1
>gi|209870059 hypothetical protein LOC120376 [Homo sapiens]
Length = 154
Score = 330 bits (847), Expect = 2e-91
Identities = 154/154 (100%), Positives = 154/154 (100%)
Query: 1 MHPEPLLNSTQSAPHHFPDSFQATPFCFNQSLIPGSPSNSSILSGSLDYSYSPVQLPSYA 60
MHPEPLLNSTQSAPHHFPDSFQATPFCFNQSLIPGSPSNSSILSGSLDYSYSPVQLPSYA
Sbjct: 1 MHPEPLLNSTQSAPHHFPDSFQATPFCFNQSLIPGSPSNSSILSGSLDYSYSPVQLPSYA 60
Query: 61 PENYNSPASLDTRTCGYPPEDHSYQHLSSHAQYSCFSSATTSICYCASCEAEDLDALQAA 120
PENYNSPASLDTRTCGYPPEDHSYQHLSSHAQYSCFSSATTSICYCASCEAEDLDALQAA
Sbjct: 61 PENYNSPASLDTRTCGYPPEDHSYQHLSSHAQYSCFSSATTSICYCASCEAEDLDALQAA 120
Query: 121 EYFYPSTDCVDFAPSAAATSDFYKRETNCDICYS 154
EYFYPSTDCVDFAPSAAATSDFYKRETNCDICYS
Sbjct: 121 EYFYPSTDCVDFAPSAAATSDFYKRETNCDICYS 154
>gi|242117971 RNA binding motif protein, X-linked-like 1 [Homo
sapiens]
Length = 390
Score = 30.4 bits (67), Expect = 0.63
Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 7/60 (11%)
Query: 37 PSNSSILSGSLDYSYSPVQLPSYAPENYNSPASLDTRTCGYPPEDHSYQ---HLSSHAQY 93
PS + D YS SY+ +Y P+S DTR PP D++Y+ H SS Y
Sbjct: 200 PSRRDVYLSPRDDGYSTKD--SYSSRDY--PSSRDTRDYAPPPRDYTYRDYGHSSSRDDY 255
>gi|21361809 RNA binding motif protein, X-linked-like 1 [Homo
sapiens]
Length = 390
Score = 30.4 bits (67), Expect = 0.63
Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 7/60 (11%)
Query: 37 PSNSSILSGSLDYSYSPVQLPSYAPENYNSPASLDTRTCGYPPEDHSYQ---HLSSHAQY 93
PS + D YS SY+ +Y P+S DTR PP D++Y+ H SS Y
Sbjct: 200 PSRRDVYLSPRDDGYSTKD--SYSSRDY--PSSRDTRDYAPPPRDYTYRDYGHSSSRDDY 255
>gi|56699409 RNA binding motif protein, X-linked [Homo sapiens]
Length = 391
Score = 30.4 bits (67), Expect = 0.63
Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 7/60 (11%)
Query: 37 PSNSSILSGSLDYSYSPVQLPSYAPENYNSPASLDTRTCGYPPEDHSYQ---HLSSHAQY 93
PS + D YS SY+ +Y P+S DTR PP D++Y+ H SS Y
Sbjct: 200 PSRRDVYLSPRDDGYSTKD--SYSSRDY--PSSRDTRDYAPPPRDYTYRDYGHSSSRDDY 255
>gi|36030946 LOC90806 protein [Homo sapiens]
Length = 544
Score = 30.4 bits (67), Expect = 0.63
Identities = 17/49 (34%), Positives = 22/49 (44%)
Query: 6 LLNSTQSAPHHFPDSFQATPFCFNQSLIPGSPSNSSILSGSLDYSYSPV 54
LL S H SF C + + +PGSP S I G L+Y P+
Sbjct: 328 LLAEISSVAHQKDGSFCPIVMCGDFNSVPGSPLYSFIKEGKLNYEGLPI 376
>gi|110349788 absent, small, or homeotic 1-like [Homo sapiens]
Length = 2964
Score = 30.0 bits (66), Expect = 0.82
Identities = 19/68 (27%), Positives = 34/68 (50%), Gaps = 11/68 (16%)
Query: 31 SLIPGSPSNSSILSGSLDYSYSPVQLPSYAPENYNSPASLDT----------RTCGYPPE 80
+L+P SPS+ S L+ + + SP+ S++ E S + + T + CG
Sbjct: 1165 TLLPNSPSHLSELTSLKEATPSPIS-ESHSDETIPSDSGIGTDNNSTSDRAEKFCGQKKR 1223
Query: 81 DHSYQHLS 88
HS++H+S
Sbjct: 1224 RHSFEHVS 1231
>gi|119220552 sidekick 1 [Homo sapiens]
Length = 2213
Score = 29.6 bits (65), Expect = 1.1
Identities = 30/136 (22%), Positives = 53/136 (38%), Gaps = 11/136 (8%)
Query: 7 LNSTQSAPHHFPDSFQATPFCFNQSLIPGSPSNSSILSGSLDYSYSPVQLPSYAPENYNS 66
+ + Q P P S ATP + LI P L+G L Y Y Y +
Sbjct: 1571 VTTLQDVPGEPPGSVSATPHTTSSVLIQWQPPRDESLNGLLQ-GYRIY----YRELEYEA 1625
Query: 67 PASLDTRTCGYPPEDHSYQHLSSHAQYSCFSSATTSICYCASCEAEDLDALQAAEYFYPS 126
+ + +T P H+ L++ + + +S++TS CE L + E +
Sbjct: 1626 GSGTEAKTLKNPIALHA--ELTAQSSFKTVNSSSTS----TMCELTHLKKYRRYEVIMTA 1679
Query: 127 TDCVDFAPSAAATSDF 142
+ + +P++A F
Sbjct: 1680 YNIIGESPASAPVEVF 1695
>gi|188497758 ubiquitin associated protein 2-like isoform a [Homo
sapiens]
Length = 1087
Score = 29.6 bits (65), Expect = 1.1
Identities = 23/79 (29%), Positives = 34/79 (43%), Gaps = 5/79 (6%)
Query: 4 EPLLNSTQSAPHHFPDSFQATPFCFNQSLIPGSPSNSSILSGSLDYSYSPVQLPSYAPEN 63
EP+L+ +S P S QA + + S + SS S Y P+Q +Y +N
Sbjct: 526 EPVLSDYESTPTTSASSSQAPSSLYTSTASESSSTISSNQSQESGYQSGPIQSTTYTSQN 585
Query: 64 YNSPASL----DTRTCGYP 78
N+ L T+T YP
Sbjct: 586 -NAQGPLYEQRSTQTRRYP 603
>gi|188497756 ubiquitin associated protein 2-like isoform b [Homo
sapiens]
Length = 983
Score = 29.6 bits (65), Expect = 1.1
Identities = 23/79 (29%), Positives = 34/79 (43%), Gaps = 5/79 (6%)
Query: 4 EPLLNSTQSAPHHFPDSFQATPFCFNQSLIPGSPSNSSILSGSLDYSYSPVQLPSYAPEN 63
EP+L+ +S P S QA + + S + SS S Y P+Q +Y +N
Sbjct: 526 EPVLSDYESTPTTSASSSQAPSSLYTSTASESSSTISSNQSQESGYQSGPIQSTTYTSQN 585
Query: 64 YNSPASL----DTRTCGYP 78
N+ L T+T YP
Sbjct: 586 -NAQGPLYEQRSTQTRRYP 603
>gi|22325364 ubiquitin associated protein 2 [Homo sapiens]
Length = 1119
Score = 29.6 bits (65), Expect = 1.1
Identities = 28/115 (24%), Positives = 52/115 (45%), Gaps = 10/115 (8%)
Query: 31 SLIPGSPSNSSILSGSL----DYSYSPVQLPSYAPENYNSPASLDTRTCGYPPEDH-SYQ 85
S +P + S +++L + D + SP+ S + ++ S S H S +
Sbjct: 671 SSLPSTTSCTALLPSTSQHTGDLTSSPLSQLSSSLSSHQSSLSAHAALSSSTSHTHASVE 730
Query: 86 HLSSHAQYSCFSSATTSICYCASCEAEDLDALQAAEYFYPSTDCVDFAPSAAATS 140
SSH + FS+A TS+ AS A ++ A ++ C+ P++A++S
Sbjct: 731 SASSHQSSATFSTAATSVSSSASSGASLSSSMNTA-----NSLCLGGTPASASSS 780
>gi|239755326 PREDICTED: hypothetical protein [Homo sapiens]
Length = 375
Score = 28.9 bits (63), Expect = 1.8
Identities = 13/36 (36%), Positives = 20/36 (55%)
Query: 85 QHLSSHAQYSCFSSATTSICYCASCEAEDLDALQAA 120
QH +S + SC SS T+S C C S + + Q++
Sbjct: 10 QHRASSSSCSCQSSQTSSTCSCQSSQTSSTCSCQSS 45
Score = 26.6 bits (57), Expect = 9.1
Identities = 11/21 (52%), Positives = 13/21 (61%)
Query: 88 SSHAQYSCFSSATTSICYCAS 108
+S YSC SS T+S C C S
Sbjct: 197 TSSTSYSCQSSGTSSTCSCQS 217
>gi|239754542 PREDICTED: hypothetical protein [Homo sapiens]
Length = 413
Score = 28.9 bits (63), Expect = 1.8
Identities = 13/32 (40%), Positives = 17/32 (53%)
Query: 95 CFSSATTSICYCASCEAEDLDALQAAEYFYPS 126
C SS+ +S C C SCE D+ + A Y S
Sbjct: 135 CVSSSASSSCECCSCERVAQDSARKARCLYLS 166
>gi|239749107 PREDICTED: hypothetical protein XP_002346912 [Homo
sapiens]
Length = 413
Score = 28.9 bits (63), Expect = 1.8
Identities = 13/32 (40%), Positives = 17/32 (53%)
Query: 95 CFSSATTSICYCASCEAEDLDALQAAEYFYPS 126
C SS+ +S C C SCE D+ + A Y S
Sbjct: 135 CVSSSASSSCECCSCERVAQDSARKARCLYLS 166
>gi|239744133 PREDICTED: hypothetical protein [Homo sapiens]
Length = 375
Score = 28.9 bits (63), Expect = 1.8
Identities = 13/36 (36%), Positives = 20/36 (55%)
Query: 85 QHLSSHAQYSCFSSATTSICYCASCEAEDLDALQAA 120
QH +S + SC SS T+S C C S + + Q++
Sbjct: 10 QHRASSSSCSCQSSQTSSTCSCQSSQTSSTCSCQSS 45
Score = 26.6 bits (57), Expect = 9.1
Identities = 11/21 (52%), Positives = 13/21 (61%)
Query: 88 SSHAQYSCFSSATTSICYCAS 108
+S YSC SS T+S C C S
Sbjct: 197 TSSTSYSCQSSGTSSTCSCQS 217
>gi|239743136 PREDICTED: hypothetical protein XP_002342759 [Homo
sapiens]
Length = 413
Score = 28.9 bits (63), Expect = 1.8
Identities = 13/32 (40%), Positives = 17/32 (53%)
Query: 95 CFSSATTSICYCASCEAEDLDALQAAEYFYPS 126
C SS+ +S C C SCE D+ + A Y S
Sbjct: 135 CVSSSASSSCECCSCERVAQDSARKARCLYLS 166
>gi|239508794 PREDICTED: hypothetical protein [Homo sapiens]
Length = 413
Score = 28.9 bits (63), Expect = 1.8
Identities = 13/32 (40%), Positives = 17/32 (53%)
Query: 95 CFSSATTSICYCASCEAEDLDALQAAEYFYPS 126
C SS+ +S C C SCE D+ + A Y S
Sbjct: 135 CVSSSASSSCECCSCERVAQDSARKARCLYLS 166
>gi|4505939 DNA-directed RNA polymerase II A [Homo sapiens]
Length = 1970
Score = 28.9 bits (63), Expect = 1.8
Identities = 21/59 (35%), Positives = 26/59 (44%), Gaps = 8/59 (13%)
Query: 34 PGSPSNSSIL----SGSLDYSYSPVQLPSYAPENYNSPASLDTRTCGYPPEDHSYQHLS 88
PGSP SS G++ SYSP P+Y P SP ++ Y P SY S
Sbjct: 1572 PGSPGPSSPYIPSPGGAMSPSYSPTS-PAYEP---RSPGGYTPQSPSYSPTSPSYSPTS 1626
>gi|55741677 SET domain containing 1A [Homo sapiens]
Length = 1707
Score = 28.9 bits (63), Expect = 1.8
Identities = 32/139 (23%), Positives = 52/139 (37%), Gaps = 19/139 (13%)
Query: 17 FPDSFQATPFCFNQSLIPGSPSNSSILSGSLDYSYSPVQLPSYAPENYNSPASLDTRTCG 76
F S Q TP F Q S GS YS +S S T +
Sbjct: 249 FSSSRQDTPSSFGQFTPQSSQGTPYTSRGSTPYSQ-------------DSAYSSSTTSTS 295
Query: 77 YPPE--DHSYQHLSSHAQYSCFSSATTSICYCASCEAEDLDALQAAEYFYPSTDCVDFAP 134
+ P ++SYQ S +S S++TT+ A+ A + ++ S+ +
Sbjct: 296 FKPRRSENSYQDAFSRRHFSASSASTTASTAIAATTAATASSSASSSSLSSSSS----SS 351
Query: 135 SAAATSDFYKRETNCDICY 153
S++++S F + N Y
Sbjct: 352 SSSSSSQFRSSDANYPAYY 370
>gi|10863935 reticulon 1 isoform A [Homo sapiens]
Length = 776
Score = 28.9 bits (63), Expect = 1.8
Identities = 13/44 (29%), Positives = 23/44 (52%), Gaps = 4/44 (9%)
Query: 66 SPASLDTRTCGYP----PEDHSYQHLSSHAQYSCFSSATTSICY 105
SP +++T + G DH++ S + SC++S + ICY
Sbjct: 71 SPVAMETASTGVAGVSSAMDHTFSTTSKDGEGSCYTSLISDICY 114
>gi|6005830 plakophilin 3 [Homo sapiens]
Length = 797
Score = 28.9 bits (63), Expect = 1.8
Identities = 13/41 (31%), Positives = 24/41 (58%)
Query: 31 SLIPGSPSNSSILSGSLDYSYSPVQLPSYAPENYNSPASLD 71
+L G S S LSG + P+ P+Y+P +++S +++D
Sbjct: 86 TLQAGFSSRSQGLSGDKTSGFRPIAKPAYSPASWSSRSAVD 126
>gi|66529407 tensin [Homo sapiens]
Length = 1735
Score = 28.5 bits (62), Expect = 2.4
Identities = 27/87 (31%), Positives = 36/87 (41%), Gaps = 13/87 (14%)
Query: 5 PLLNSTQSAPHHFP--DSFQATPFCFNQSLIPGSPSNSSILSGSLDYSYSPVQLPSYAPE 62
P+L++ ++ FP +S P Q L+ S SGSL Q A
Sbjct: 1081 PILSADSTSVGSFPSGESSDQGPRTPTQPLL-----ESGFRSGSLG------QPSPSAQR 1129
Query: 63 NYNSPASLDTRTCGYPPEDHSYQHLSS 89
NY S + L T Y D+S QH SS
Sbjct: 1130 NYQSSSPLPTVGSSYSSPDYSLQHFSS 1156
>gi|58530876 melanoma antigen family C, 1 [Homo sapiens]
Length = 1142
Score = 28.5 bits (62), Expect = 2.4
Identities = 22/65 (33%), Positives = 31/65 (47%), Gaps = 9/65 (13%)
Query: 8 NSTQSAPHHFPDSFQATPFCFNQSLI--PGSPSNSSILSGSLDYSYSPVQLPSYAPENYN 65
++ S P FP+S Q+ P QS + P SP +S SP+Q P APE +
Sbjct: 635 STPSSLPQSFPESSQSPPEGPVQSPLHSPQSPPEGM-------HSQSPLQSPESAPEGED 687
Query: 66 SPASL 70
S + L
Sbjct: 688 SLSPL 692
Score = 27.3 bits (59), Expect = 5.3
Identities = 21/76 (27%), Positives = 34/76 (44%), Gaps = 11/76 (14%)
Query: 6 LLNSTQSAPHHFPDSFQATPFCFNQSLIPGSPSNSSILSGSLD-----------YSYSPV 54
LL+ QS+P +F+ P Q + S S+S++LS + SP+
Sbjct: 455 LLSLFQSSPERTHSTFEGFPQSPLQIPVSSSSSSSTLLSLFQSSPECTQSTFEGFPQSPL 514
Query: 55 QLPSYAPENYNSPASL 70
Q+P PE N+ + L
Sbjct: 515 QIPQSPPEGENTHSPL 530
>gi|150378543 MYST histone acetyltransferase (monocytic leukemia) 3
[Homo sapiens]
Length = 2004
Score = 28.5 bits (62), Expect = 2.4
Identities = 21/68 (30%), Positives = 29/68 (42%)
Query: 37 PSNSSILSGSLDYSYSPVQLPSYAPENYNSPASLDTRTCGYPPEDHSYQHLSSHAQYSCF 96
PS S +D +S + ENY +P+S D+ G + S Q S+ S
Sbjct: 1536 PSVSDHSQQVVDSGFSDLGSIESTTENYENPSSYDSTMGGSICGNSSSQSSCSYGGLSSS 1595
Query: 97 SSATTSIC 104
SS T S C
Sbjct: 1596 SSLTQSSC 1603
>gi|150378463 MYST histone acetyltransferase (monocytic leukemia) 3
[Homo sapiens]
Length = 2004
Score = 28.5 bits (62), Expect = 2.4
Identities = 21/68 (30%), Positives = 29/68 (42%)
Query: 37 PSNSSILSGSLDYSYSPVQLPSYAPENYNSPASLDTRTCGYPPEDHSYQHLSSHAQYSCF 96
PS S +D +S + ENY +P+S D+ G + S Q S+ S
Sbjct: 1536 PSVSDHSQQVVDSGFSDLGSIESTTENYENPSSYDSTMGGSICGNSSSQSSCSYGGLSSS 1595
Query: 97 SSATTSIC 104
SS T S C
Sbjct: 1596 SSLTQSSC 1603
>gi|150378493 MYST histone acetyltransferase (monocytic leukemia) 3
[Homo sapiens]
Length = 2004
Score = 28.5 bits (62), Expect = 2.4
Identities = 21/68 (30%), Positives = 29/68 (42%)
Query: 37 PSNSSILSGSLDYSYSPVQLPSYAPENYNSPASLDTRTCGYPPEDHSYQHLSSHAQYSCF 96
PS S +D +S + ENY +P+S D+ G + S Q S+ S
Sbjct: 1536 PSVSDHSQQVVDSGFSDLGSIESTTENYENPSSYDSTMGGSICGNSSSQSSCSYGGLSSS 1595
Query: 97 SSATTSIC 104
SS T S C
Sbjct: 1596 SSLTQSSC 1603
>gi|9955937 acrosomal vesicle protein 1 isoform f precursor [Homo
sapiens]
Length = 170
Score = 28.5 bits (62), Expect = 2.4
Identities = 24/82 (29%), Positives = 35/82 (42%), Gaps = 9/82 (10%)
Query: 35 GSPSNSSILSGSLDYSYSPVQLPSYAPEN--------YNSPASLDTRTCGYPPEDHSYQH 86
G+ S + LSGS+D+ S QLP P + S + + P +H+
Sbjct: 18 GTSSQPNELSGSIDHQTSVQQLPGEQPSDEQPSGEHGSGEQPSGEQASGEQPSGEHASGE 77
Query: 87 LSSHAQYSCFSSATTSICY-CA 107
+S A S S+ T CY CA
Sbjct: 78 QASGAPISSTSTGTILNCYTCA 99
>gi|148236531 hypothetical protein LOC339779 [Homo sapiens]
Length = 412
Score = 28.5 bits (62), Expect = 2.4
Identities = 25/83 (30%), Positives = 41/83 (49%), Gaps = 13/83 (15%)
Query: 8 NSTQSAPHHFPDSFQATPFCFNQSLI------PGSPSNSSIL-SGSLDYSYSPVQLPSYA 60
+++ APH + S ++P F+Q+ + SPSN + S L S+SP Q
Sbjct: 78 SNSDFAPHPYSPSLPSSPTFFHQNYLSLPRPRASSPSNHWLYPSPPLTPSFSPSQ----- 132
Query: 61 PENYNSPASLDTRTCGYPPEDHS 83
P+N + P S ++ +P E HS
Sbjct: 133 PQNSSLPHS-PCQSPSHPEELHS 154
>gi|66932988 filamin-binding LIM protein-1 isoform c [Homo sapiens]
Length = 276
Score = 27.7 bits (60), Expect = 4.1
Identities = 23/79 (29%), Positives = 31/79 (39%), Gaps = 19/79 (24%)
Query: 75 CGYPPEDHSYQHLSSHAQYSCFSSATTSICYCASCEAEDLDALQAAEYFYPSTDCVDFAP 134
CG DH + L SCF+ T CA C ++ AL + Y C+D
Sbjct: 149 CGEVVRDHIIRALGQAFHPSCFTCVT-----CARCIGDESFALGSQNEVY----CLD--- 196
Query: 135 SAAATSDFYKR-ETNCDIC 152
DFY++ C IC
Sbjct: 197 ------DFYRKFAPVCSIC 209
>gi|66932982 filamin-binding LIM protein-1 isoform a [Homo sapiens]
Length = 373
Score = 27.7 bits (60), Expect = 4.1
Identities = 23/79 (29%), Positives = 31/79 (39%), Gaps = 19/79 (24%)
Query: 75 CGYPPEDHSYQHLSSHAQYSCFSSATTSICYCASCEAEDLDALQAAEYFYPSTDCVDFAP 134
CG DH + L SCF+ T CA C ++ AL + Y C+D
Sbjct: 246 CGEVVRDHIIRALGQAFHPSCFTCVT-----CARCIGDESFALGSQNEVY----CLD--- 293
Query: 135 SAAATSDFYKR-ETNCDIC 152
DFY++ C IC
Sbjct: 294 ------DFYRKFAPVCSIC 306
>gi|9966885 tumor endothelial marker 1 precursor [Homo sapiens]
Length = 757
Score = 27.7 bits (60), Expect = 4.1
Identities = 20/67 (29%), Positives = 29/67 (43%), Gaps = 2/67 (2%)
Query: 3 PEPLLNSTQSAPHHFPDSFQATPFCFNQSLIPGSPSNSSILSGSLDYSYSPVQLPSYAPE 62
P+ L+ TQ+ P A P S P SP++ + + + P LPS +P
Sbjct: 570 PDALVLRTQAT--QLPIIPTAQPSLTTTSRSPVSPAHQISVPAATQPAALPTLLPSQSPT 627
Query: 63 NYNSPAS 69
N SP S
Sbjct: 628 NQTSPIS 634
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.315 0.127 0.403
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,221,346
Number of Sequences: 37866
Number of extensions: 340907
Number of successful extensions: 1001
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 31
Number of HSP's that attempted gapping in prelim test: 958
Number of HSP's gapped (non-prelim): 74
length of query: 154
length of database: 18,247,518
effective HSP length: 93
effective length of query: 61
effective length of database: 14,725,980
effective search space: 898284780
effective search space used: 898284780
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 57 (26.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.