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Search of human proteins with 209693439
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|209693439 synuclein, gamma (breast cancer-specific protein
1) [Homo sapiens]
(127 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|209693439 synuclein, gamma (breast cancer-specific protein 1)... 239 4e-64
gi|225690604 alpha-synuclein isoform NACP140 [Homo sapiens] 123 3e-29
gi|225690602 alpha-synuclein isoform NACP140 [Homo sapiens] 123 3e-29
gi|4507109 alpha-synuclein isoform NACP140 [Homo sapiens] 123 3e-29
gi|6806898 alpha-synuclein isoform NACP112 [Homo sapiens] 122 7e-29
gi|48255903 beta-synuclein [Homo sapiens] 116 5e-27
gi|4507111 beta-synuclein [Homo sapiens] 116 5e-27
gi|110349721 titin isoform novex-3 [Homo sapiens] 39 0.001
gi|110349719 titin isoform N2-A [Homo sapiens] 39 0.001
gi|110349717 titin isoform novex-2 [Homo sapiens] 39 0.001
gi|110349713 titin isoform novex-1 [Homo sapiens] 39 0.001
gi|110349715 titin isoform N2-B [Homo sapiens] 39 0.001
gi|28274705 family with sequence similarity 9, member A [Homo sa... 35 0.016
gi|21493022 A kinase (PRKA) anchor protein 12 isoform 1 [Homo sa... 34 0.035
gi|21493024 A kinase (PRKA) anchor protein 12 isoform 2 [Homo sa... 34 0.035
gi|122937195 plasma membrane associated protein, S3-12 [Homo sap... 33 0.045
gi|239756568 PREDICTED: similar to BCL2-associated transcription... 33 0.059
gi|169218320 PREDICTED: similar to BCL2-associated transcription... 33 0.059
gi|145309326 laminin, gamma 1 precursor [Homo sapiens] 33 0.077
gi|218505787 protocadherin 15 isoform CD2-1 precursor [Homo sapi... 33 0.077
gi|210032580 SET domain containing 1B [Homo sapiens] 32 0.13
gi|34577059 adipose differentiation-related protein [Homo sapiens] 32 0.17
gi|13124879 smooth muscle myosin heavy chain 11 isoform SM1A [Ho... 32 0.17
gi|92091586 smooth muscle myosin heavy chain 11 isoform SM1B [Ho... 32 0.17
gi|92091583 smooth muscle myosin heavy chain 11 isoform SM2B [Ho... 32 0.17
gi|13124875 smooth muscle myosin heavy chain 11 isoform SM2A [Ho... 32 0.17
gi|105990539 neurofilament, light polypeptide 68kDa [Homo sapiens] 32 0.17
gi|117938254 BCL2-associated transcription factor 1 isoform 3 [H... 31 0.22
gi|117938251 BCL2-associated transcription factor 1 isoform 2 [H... 31 0.22
gi|7661958 BCL2-associated transcription factor 1 isoform 1 [Hom... 31 0.22
>gi|209693439 synuclein, gamma (breast cancer-specific protein 1)
[Homo sapiens]
Length = 127
Score = 239 bits (610), Expect = 4e-64
Identities = 127/127 (100%), Positives = 127/127 (100%)
Query: 1 MDVFKKGFSIAKEGVVGAVEKTKQGVTEAAEKTKEGVMYVGAKTKENVVQSVTSVAEKTK 60
MDVFKKGFSIAKEGVVGAVEKTKQGVTEAAEKTKEGVMYVGAKTKENVVQSVTSVAEKTK
Sbjct: 1 MDVFKKGFSIAKEGVVGAVEKTKQGVTEAAEKTKEGVMYVGAKTKENVVQSVTSVAEKTK 60
Query: 61 EQANAVSEAVVSSVNTVATKTVEEAENIAVTSGVVRKEDLRPSAPQQEGEASKEKEEVAE 120
EQANAVSEAVVSSVNTVATKTVEEAENIAVTSGVVRKEDLRPSAPQQEGEASKEKEEVAE
Sbjct: 61 EQANAVSEAVVSSVNTVATKTVEEAENIAVTSGVVRKEDLRPSAPQQEGEASKEKEEVAE 120
Query: 121 EAQSGGD 127
EAQSGGD
Sbjct: 121 EAQSGGD 127
>gi|225690604 alpha-synuclein isoform NACP140 [Homo sapiens]
Length = 140
Score = 123 bits (309), Expect = 3e-29
Identities = 69/110 (62%), Positives = 78/110 (70%), Gaps = 3/110 (2%)
Query: 1 MDVFKKGFSIAKEGVVGAVEKTKQGVTEAAEKTKEGVMYVGAKTKENVVQSVTSVAEKTK 60
MDVF KG S AKEGVV A EKTKQGV EAA KTKEGV+YVG+KTKE VV V +VAEKTK
Sbjct: 1 MDVFMKGLSKAKEGVVAAAEKTKQGVAEAAGKTKEGVLYVGSKTKEGVVHGVATVAEKTK 60
Query: 61 EQANAVSEAVVSSVNTVATKTVEEAENIAVTSGVVRKEDL---RPSAPQQ 107
EQ V AVV+ V VA KTVE A +IA +G V+K+ L APQ+
Sbjct: 61 EQVTNVGGAVVTGVTAVAQKTVEGAGSIAAATGFVKKDQLGKNEEGAPQE 110
>gi|225690602 alpha-synuclein isoform NACP140 [Homo sapiens]
Length = 140
Score = 123 bits (309), Expect = 3e-29
Identities = 69/110 (62%), Positives = 78/110 (70%), Gaps = 3/110 (2%)
Query: 1 MDVFKKGFSIAKEGVVGAVEKTKQGVTEAAEKTKEGVMYVGAKTKENVVQSVTSVAEKTK 60
MDVF KG S AKEGVV A EKTKQGV EAA KTKEGV+YVG+KTKE VV V +VAEKTK
Sbjct: 1 MDVFMKGLSKAKEGVVAAAEKTKQGVAEAAGKTKEGVLYVGSKTKEGVVHGVATVAEKTK 60
Query: 61 EQANAVSEAVVSSVNTVATKTVEEAENIAVTSGVVRKEDL---RPSAPQQ 107
EQ V AVV+ V VA KTVE A +IA +G V+K+ L APQ+
Sbjct: 61 EQVTNVGGAVVTGVTAVAQKTVEGAGSIAAATGFVKKDQLGKNEEGAPQE 110
>gi|4507109 alpha-synuclein isoform NACP140 [Homo sapiens]
Length = 140
Score = 123 bits (309), Expect = 3e-29
Identities = 69/110 (62%), Positives = 78/110 (70%), Gaps = 3/110 (2%)
Query: 1 MDVFKKGFSIAKEGVVGAVEKTKQGVTEAAEKTKEGVMYVGAKTKENVVQSVTSVAEKTK 60
MDVF KG S AKEGVV A EKTKQGV EAA KTKEGV+YVG+KTKE VV V +VAEKTK
Sbjct: 1 MDVFMKGLSKAKEGVVAAAEKTKQGVAEAAGKTKEGVLYVGSKTKEGVVHGVATVAEKTK 60
Query: 61 EQANAVSEAVVSSVNTVATKTVEEAENIAVTSGVVRKEDL---RPSAPQQ 107
EQ V AVV+ V VA KTVE A +IA +G V+K+ L APQ+
Sbjct: 61 EQVTNVGGAVVTGVTAVAQKTVEGAGSIAAATGFVKKDQLGKNEEGAPQE 110
>gi|6806898 alpha-synuclein isoform NACP112 [Homo sapiens]
Length = 112
Score = 122 bits (306), Expect = 7e-29
Identities = 66/100 (66%), Positives = 74/100 (74%)
Query: 1 MDVFKKGFSIAKEGVVGAVEKTKQGVTEAAEKTKEGVMYVGAKTKENVVQSVTSVAEKTK 60
MDVF KG S AKEGVV A EKTKQGV EAA KTKEGV+YVG+KTKE VV V +VAEKTK
Sbjct: 1 MDVFMKGLSKAKEGVVAAAEKTKQGVAEAAGKTKEGVLYVGSKTKEGVVHGVATVAEKTK 60
Query: 61 EQANAVSEAVVSSVNTVATKTVEEAENIAVTSGVVRKEDL 100
EQ V AVV+ V VA KTVE A +IA +G V+K+ L
Sbjct: 61 EQVTNVGGAVVTGVTAVAQKTVEGAGSIAAATGFVKKDQL 100
>gi|48255903 beta-synuclein [Homo sapiens]
Length = 134
Score = 116 bits (290), Expect = 5e-27
Identities = 67/112 (59%), Positives = 78/112 (69%), Gaps = 15/112 (13%)
Query: 1 MDVFKKGFSIAKEGVVGAVEKTKQGVTEAAEKTKEGVMYVGAKTKENVVQSVTSVAEKTK 60
MDVF KG S+AKEGVV A EKTKQGVTEAAEKTKEGV+YVG+KT+E VVQ V SVAEKTK
Sbjct: 1 MDVFMKGLSMAKEGVVAAAEKTKQGVTEAAEKTKEGVLYVGSKTREGVVQGVASVAEKTK 60
Query: 61 EQANAVSEAVVSSVNTVATKTVEEAENIAVTSGVVRKE----DLRPSAPQQE 108
EQA+ + AV S A NIA +G+V++E DL+P QE
Sbjct: 61 EQASHLGGAVFSG-----------AGNIAAATGLVKREEFPTDLKPEEVAQE 101
>gi|4507111 beta-synuclein [Homo sapiens]
Length = 134
Score = 116 bits (290), Expect = 5e-27
Identities = 67/112 (59%), Positives = 78/112 (69%), Gaps = 15/112 (13%)
Query: 1 MDVFKKGFSIAKEGVVGAVEKTKQGVTEAAEKTKEGVMYVGAKTKENVVQSVTSVAEKTK 60
MDVF KG S+AKEGVV A EKTKQGVTEAAEKTKEGV+YVG+KT+E VVQ V SVAEKTK
Sbjct: 1 MDVFMKGLSMAKEGVVAAAEKTKQGVTEAAEKTKEGVLYVGSKTREGVVQGVASVAEKTK 60
Query: 61 EQANAVSEAVVSSVNTVATKTVEEAENIAVTSGVVRKE----DLRPSAPQQE 108
EQA+ + AV S A NIA +G+V++E DL+P QE
Sbjct: 61 EQASHLGGAVFSG-----------AGNIAAATGLVKREEFPTDLKPEEVAQE 101
>gi|110349721 titin isoform novex-3 [Homo sapiens]
Length = 5604
Score = 38.5 bits (88), Expect = 0.001
Identities = 31/106 (29%), Positives = 47/106 (44%), Gaps = 9/106 (8%)
Query: 12 KEGVVGAVEKTKQGVTEAAEKTKEGVMYVGAKTKENVVQSVTSVAEKTKEQANAVSEAVV 71
+E V+ AVE+T Q T A + V + ++ V V A+K KEQ E
Sbjct: 439 REPVISAVEQTAQRTTTTAVHIQPAQEQVRKEAEKTAVTKVVVAADKAKEQ-----ELKS 493
Query: 72 SSVNTVATKTVEEAENIAVTSGVVRKEDLRPSAPQQEGEASKEKEE 117
+ + TK E + VT +RKE + P+ A+K KE+
Sbjct: 494 RTKEVITTK----QEQMHVTHEQIRKETEKTFVPKVVISAAKAKEQ 535
Score = 33.1 bits (74), Expect = 0.059
Identities = 22/101 (21%), Positives = 43/101 (42%), Gaps = 3/101 (2%)
Query: 21 KTKQGVTEAAEKTKEGVMYVGAKTKENVVQSVTSVAEKTKEQANAVSEAVVSSVNTVATK 80
+TK+ +T E+ + +T++ V V A K KEQ +SE + V +
Sbjct: 494 RTKEVITTKQEQMHVTHEQIRKETEKTFVPKVVISAAKAKEQETRISEEITKKQKQVTQE 553
Query: 81 TVEEAENIAVTSGVV---RKEDLRPSAPQQEGEASKEKEEV 118
+ + I S VV K + P + E + +++++
Sbjct: 554 AIRQETEITAASMVVVATAKSTKLETVPGAQEETTTQQDQM 594
Score = 32.0 bits (71), Expect = 0.13
Identities = 28/105 (26%), Positives = 41/105 (39%), Gaps = 6/105 (5%)
Query: 14 GVVGAVEKTKQGVTEAAEKTKEGVMYVGAKT-KENVVQSVTSVAEKTKEQANAVSEAVVS 72
G GA + AAE G V K V +V + + + V E V+S
Sbjct: 390 GAAGAAASVSASASYAAEAVATGAKEVKQDADKSAAVATVVAAVDMAR-----VREPVIS 444
Query: 73 SVNTVATKTVEEAENIAVTSGVVRKEDLRPSAPQQEGEASKEKEE 117
+V A +T A +I VRKE + + + A K KE+
Sbjct: 445 AVEQTAQRTTTTAVHIQPAQEQVRKEAEKTAVTKVVVAADKAKEQ 489
Score = 26.2 bits (56), Expect = 7.2
Identities = 30/115 (26%), Positives = 49/115 (42%), Gaps = 13/115 (11%)
Query: 9 SIAKEGVVGAVEKTKQGVTEAAEKTKEGVMYVGAKTKENVVQSVTSVAEKTKEQANAVSE 68
S A E V ++ KQ A+K+ V A V + V S E+T ++ +
Sbjct: 403 SYAAEAVATGAKEVKQD----ADKSAAVATVVAAVDMARVREPVISAVEQTAQRTTTTAV 458
Query: 69 AVVSSVNTVATKTVEEAENIAVTSGVVRKEDLRPSAPQQEGEASKEKEEVAEEAQ 123
+ + V +EAE AVT VV + A +QE + S+ KE + + +
Sbjct: 459 HIQPAQEQVR----KEAEKTAVTKVVVAAD----KAKEQELK-SRTKEVITTKQE 504
>gi|110349719 titin isoform N2-A [Homo sapiens]
Length = 33423
Score = 38.5 bits (88), Expect = 0.001
Identities = 31/106 (29%), Positives = 47/106 (44%), Gaps = 9/106 (8%)
Query: 12 KEGVVGAVEKTKQGVTEAAEKTKEGVMYVGAKTKENVVQSVTSVAEKTKEQANAVSEAVV 71
+E V+ AVE+T Q T A + V + ++ V V A+K KEQ E
Sbjct: 439 REPVISAVEQTAQRTTTTAVHIQPAQEQVRKEAEKTAVTKVVVAADKAKEQ-----ELKS 493
Query: 72 SSVNTVATKTVEEAENIAVTSGVVRKEDLRPSAPQQEGEASKEKEE 117
+ + TK E + VT +RKE + P+ A+K KE+
Sbjct: 494 RTKEVITTK----QEQMHVTHEQIRKETEKTFVPKVVISAAKAKEQ 535
Score = 33.1 bits (74), Expect = 0.059
Identities = 22/101 (21%), Positives = 43/101 (42%), Gaps = 3/101 (2%)
Query: 21 KTKQGVTEAAEKTKEGVMYVGAKTKENVVQSVTSVAEKTKEQANAVSEAVVSSVNTVATK 80
+TK+ +T E+ + +T++ V V A K KEQ +SE + V +
Sbjct: 494 RTKEVITTKQEQMHVTHEQIRKETEKTFVPKVVISAAKAKEQETRISEEITKKQKQVTQE 553
Query: 81 TVEEAENIAVTSGVV---RKEDLRPSAPQQEGEASKEKEEV 118
+ + I S VV K + P + E + +++++
Sbjct: 554 AIRQETEITAASMVVVATAKSTKLETVPGAQEETTTQQDQM 594
Score = 32.0 bits (71), Expect = 0.13
Identities = 28/105 (26%), Positives = 41/105 (39%), Gaps = 6/105 (5%)
Query: 14 GVVGAVEKTKQGVTEAAEKTKEGVMYVGAKT-KENVVQSVTSVAEKTKEQANAVSEAVVS 72
G GA + AAE G V K V +V + + + V E V+S
Sbjct: 390 GAAGAAASVSASASYAAEAVATGAKEVKQDADKSAAVATVVAAVDMAR-----VREPVIS 444
Query: 73 SVNTVATKTVEEAENIAVTSGVVRKEDLRPSAPQQEGEASKEKEE 117
+V A +T A +I VRKE + + + A K KE+
Sbjct: 445 AVEQTAQRTTTTAVHIQPAQEQVRKEAEKTAVTKVVVAADKAKEQ 489
Score = 26.6 bits (57), Expect = 5.5
Identities = 28/102 (27%), Positives = 44/102 (43%), Gaps = 3/102 (2%)
Query: 20 EKTKQGVTEAAEKTKEGVMYVGAKTKENVVQSVTSVAEKTKEQANAVSEAVVSSVNTVAT 79
+K + + ++K E + V + KE V V +K E+ V + +V
Sbjct: 10286 KKVEAPPAKVSKKIPEEKVPVPVQKKEAPPAKVPEVPKKVPEKKVLVPKK--EAVPPAKG 10343
Query: 80 KTV-EEAENIAVTSGVVRKEDLRPSAPQQEGEASKEKEEVAE 120
+TV EE ++A VV KE L + E E E+EE E
Sbjct: 10344 RTVLEEKVSVAFRQEVVVKERLELEVVEAEVEEIPEEEEFHE 10385
Score = 26.2 bits (56), Expect = 7.2
Identities = 30/115 (26%), Positives = 49/115 (42%), Gaps = 13/115 (11%)
Query: 9 SIAKEGVVGAVEKTKQGVTEAAEKTKEGVMYVGAKTKENVVQSVTSVAEKTKEQANAVSE 68
S A E V ++ KQ A+K+ V A V + V S E+T ++ +
Sbjct: 403 SYAAEAVATGAKEVKQD----ADKSAAVATVVAAVDMARVREPVISAVEQTAQRTTTTAV 458
Query: 69 AVVSSVNTVATKTVEEAENIAVTSGVVRKEDLRPSAPQQEGEASKEKEEVAEEAQ 123
+ + V +EAE AVT VV + A +QE + S+ KE + + +
Sbjct: 459 HIQPAQEQVR----KEAEKTAVTKVVVAAD----KAKEQELK-SRTKEVITTKQE 504
>gi|110349717 titin isoform novex-2 [Homo sapiens]
Length = 27118
Score = 38.5 bits (88), Expect = 0.001
Identities = 31/106 (29%), Positives = 47/106 (44%), Gaps = 9/106 (8%)
Query: 12 KEGVVGAVEKTKQGVTEAAEKTKEGVMYVGAKTKENVVQSVTSVAEKTKEQANAVSEAVV 71
+E V+ AVE+T Q T A + V + ++ V V A+K KEQ E
Sbjct: 439 REPVISAVEQTAQRTTTTAVHIQPAQEQVRKEAEKTAVTKVVVAADKAKEQ-----ELKS 493
Query: 72 SSVNTVATKTVEEAENIAVTSGVVRKEDLRPSAPQQEGEASKEKEE 117
+ + TK E + VT +RKE + P+ A+K KE+
Sbjct: 494 RTKEVITTK----QEQMHVTHEQIRKETEKTFVPKVVISAAKAKEQ 535
Score = 32.0 bits (71), Expect = 0.13
Identities = 28/105 (26%), Positives = 41/105 (39%), Gaps = 6/105 (5%)
Query: 14 GVVGAVEKTKQGVTEAAEKTKEGVMYVGAKT-KENVVQSVTSVAEKTKEQANAVSEAVVS 72
G GA + AAE G V K V +V + + + V E V+S
Sbjct: 390 GAAGAAASVSASASYAAEAVATGAKEVKQDADKSAAVATVVAAVDMAR-----VREPVIS 444
Query: 73 SVNTVATKTVEEAENIAVTSGVVRKEDLRPSAPQQEGEASKEKEE 117
+V A +T A +I VRKE + + + A K KE+
Sbjct: 445 AVEQTAQRTTTTAVHIQPAQEQVRKEAEKTAVTKVVVAADKAKEQ 489
Score = 29.3 bits (64), Expect = 0.85
Identities = 23/113 (20%), Positives = 48/113 (42%), Gaps = 10/113 (8%)
Query: 21 KTKQGVTEAAEKTKEGVMYVGAKTKENVVQSVTSVAEKTKEQANAVSEAVVSSVNTVATK 80
+TK+ +T E+ + +T++ V V A K KEQ +SE + V +
Sbjct: 494 RTKEVITTKQEQMHVTHEQIRKETEKTFVPKVVISAAKAKEQETRISEEITKKQKQVTQE 553
Query: 81 TVEE------AENIAVTSGVVRKEDL----RPSAPQQEGEASKEKEEVAEEAQ 123
+ + + V + V+++DL R + + +E++ +EA+
Sbjct: 554 AIMKETRKTVVPKVIVATPKVKEQDLVSRGREGITTKREQVQITQEKMRKEAE 606
Score = 28.1 bits (61), Expect = 1.9
Identities = 24/86 (27%), Positives = 36/86 (41%), Gaps = 10/86 (11%)
Query: 50 QSVTSVAEKTKEQANAVSEAVVSSVNTVATKTVEEAENI------AVTSGVVRKEDLRPS 103
Q V + E E +S VS N + +A + AV S + E L+PS
Sbjct: 4343 QKVEPITEPEVESKYLISTEEVSYFNVQSRVKYLDATPVTKGVASAVVSDEKQDESLKPS 4402
Query: 104 APQQEGEASKEKEEVA----EEAQSG 125
++E + EEVA +EA+ G
Sbjct: 4403 EEKEESSSESGTEEVATVKIQEAEGG 4428
Score = 26.2 bits (56), Expect = 7.2
Identities = 30/115 (26%), Positives = 49/115 (42%), Gaps = 13/115 (11%)
Query: 9 SIAKEGVVGAVEKTKQGVTEAAEKTKEGVMYVGAKTKENVVQSVTSVAEKTKEQANAVSE 68
S A E V ++ KQ A+K+ V A V + V S E+T ++ +
Sbjct: 403 SYAAEAVATGAKEVKQD----ADKSAAVATVVAAVDMARVREPVISAVEQTAQRTTTTAV 458
Query: 69 AVVSSVNTVATKTVEEAENIAVTSGVVRKEDLRPSAPQQEGEASKEKEEVAEEAQ 123
+ + V +EAE AVT VV + A +QE + S+ KE + + +
Sbjct: 459 HIQPAQEQVR----KEAEKTAVTKVVVAAD----KAKEQELK-SRTKEVITTKQE 504
>gi|110349713 titin isoform novex-1 [Homo sapiens]
Length = 27051
Score = 38.5 bits (88), Expect = 0.001
Identities = 31/106 (29%), Positives = 47/106 (44%), Gaps = 9/106 (8%)
Query: 12 KEGVVGAVEKTKQGVTEAAEKTKEGVMYVGAKTKENVVQSVTSVAEKTKEQANAVSEAVV 71
+E V+ AVE+T Q T A + V + ++ V V A+K KEQ E
Sbjct: 439 REPVISAVEQTAQRTTTTAVHIQPAQEQVRKEAEKTAVTKVVVAADKAKEQ-----ELKS 493
Query: 72 SSVNTVATKTVEEAENIAVTSGVVRKEDLRPSAPQQEGEASKEKEE 117
+ + TK E + VT +RKE + P+ A+K KE+
Sbjct: 494 RTKEVITTK----QEQMHVTHEQIRKETEKTFVPKVVISAAKAKEQ 535
Score = 32.0 bits (71), Expect = 0.13
Identities = 28/105 (26%), Positives = 41/105 (39%), Gaps = 6/105 (5%)
Query: 14 GVVGAVEKTKQGVTEAAEKTKEGVMYVGAKT-KENVVQSVTSVAEKTKEQANAVSEAVVS 72
G GA + AAE G V K V +V + + + V E V+S
Sbjct: 390 GAAGAAASVSASASYAAEAVATGAKEVKQDADKSAAVATVVAAVDMAR-----VREPVIS 444
Query: 73 SVNTVATKTVEEAENIAVTSGVVRKEDLRPSAPQQEGEASKEKEE 117
+V A +T A +I VRKE + + + A K KE+
Sbjct: 445 AVEQTAQRTTTTAVHIQPAQEQVRKEAEKTAVTKVVVAADKAKEQ 489
Score = 29.3 bits (64), Expect = 0.85
Identities = 23/113 (20%), Positives = 48/113 (42%), Gaps = 10/113 (8%)
Query: 21 KTKQGVTEAAEKTKEGVMYVGAKTKENVVQSVTSVAEKTKEQANAVSEAVVSSVNTVATK 80
+TK+ +T E+ + +T++ V V A K KEQ +SE + V +
Sbjct: 494 RTKEVITTKQEQMHVTHEQIRKETEKTFVPKVVISAAKAKEQETRISEEITKKQKQVTQE 553
Query: 81 TVEE------AENIAVTSGVVRKEDL----RPSAPQQEGEASKEKEEVAEEAQ 123
+ + + V + V+++DL R + + +E++ +EA+
Sbjct: 554 AIMKETRKTVVPKVIVATPKVKEQDLVSRGREGITTKREQVQITQEKMRKEAE 606
Score = 28.1 bits (61), Expect = 1.9
Identities = 24/86 (27%), Positives = 36/86 (41%), Gaps = 10/86 (11%)
Query: 50 QSVTSVAEKTKEQANAVSEAVVSSVNTVATKTVEEAENI------AVTSGVVRKEDLRPS 103
Q V + E E +S VS N + +A + AV S + E L+PS
Sbjct: 4276 QKVEPITEPEVESKYLISTEEVSYFNVQSRVKYLDATPVTKGVASAVVSDEKQDESLKPS 4335
Query: 104 APQQEGEASKEKEEVA----EEAQSG 125
++E + EEVA +EA+ G
Sbjct: 4336 EEKEESSSESGTEEVATVKIQEAEGG 4361
Score = 26.2 bits (56), Expect = 7.2
Identities = 30/115 (26%), Positives = 49/115 (42%), Gaps = 13/115 (11%)
Query: 9 SIAKEGVVGAVEKTKQGVTEAAEKTKEGVMYVGAKTKENVVQSVTSVAEKTKEQANAVSE 68
S A E V ++ KQ A+K+ V A V + V S E+T ++ +
Sbjct: 403 SYAAEAVATGAKEVKQD----ADKSAAVATVVAAVDMARVREPVISAVEQTAQRTTTTAV 458
Query: 69 AVVSSVNTVATKTVEEAENIAVTSGVVRKEDLRPSAPQQEGEASKEKEEVAEEAQ 123
+ + V +EAE AVT VV + A +QE + S+ KE + + +
Sbjct: 459 HIQPAQEQVR----KEAEKTAVTKVVVAAD----KAKEQELK-SRTKEVITTKQE 504
>gi|110349715 titin isoform N2-B [Homo sapiens]
Length = 26926
Score = 38.5 bits (88), Expect = 0.001
Identities = 31/106 (29%), Positives = 47/106 (44%), Gaps = 9/106 (8%)
Query: 12 KEGVVGAVEKTKQGVTEAAEKTKEGVMYVGAKTKENVVQSVTSVAEKTKEQANAVSEAVV 71
+E V+ AVE+T Q T A + V + ++ V V A+K KEQ E
Sbjct: 439 REPVISAVEQTAQRTTTTAVHIQPAQEQVRKEAEKTAVTKVVVAADKAKEQ-----ELKS 493
Query: 72 SSVNTVATKTVEEAENIAVTSGVVRKEDLRPSAPQQEGEASKEKEE 117
+ + TK E + VT +RKE + P+ A+K KE+
Sbjct: 494 RTKEVITTK----QEQMHVTHEQIRKETEKTFVPKVVISAAKAKEQ 535
Score = 32.0 bits (71), Expect = 0.13
Identities = 28/105 (26%), Positives = 41/105 (39%), Gaps = 6/105 (5%)
Query: 14 GVVGAVEKTKQGVTEAAEKTKEGVMYVGAKT-KENVVQSVTSVAEKTKEQANAVSEAVVS 72
G GA + AAE G V K V +V + + + V E V+S
Sbjct: 390 GAAGAAASVSASASYAAEAVATGAKEVKQDADKSAAVATVVAAVDMAR-----VREPVIS 444
Query: 73 SVNTVATKTVEEAENIAVTSGVVRKEDLRPSAPQQEGEASKEKEE 117
+V A +T A +I VRKE + + + A K KE+
Sbjct: 445 AVEQTAQRTTTTAVHIQPAQEQVRKEAEKTAVTKVVVAADKAKEQ 489
Score = 29.3 bits (64), Expect = 0.85
Identities = 23/113 (20%), Positives = 48/113 (42%), Gaps = 10/113 (8%)
Query: 21 KTKQGVTEAAEKTKEGVMYVGAKTKENVVQSVTSVAEKTKEQANAVSEAVVSSVNTVATK 80
+TK+ +T E+ + +T++ V V A K KEQ +SE + V +
Sbjct: 494 RTKEVITTKQEQMHVTHEQIRKETEKTFVPKVVISAAKAKEQETRISEEITKKQKQVTQE 553
Query: 81 TVEE------AENIAVTSGVVRKEDL----RPSAPQQEGEASKEKEEVAEEAQ 123
+ + + V + V+++DL R + + +E++ +EA+
Sbjct: 554 AIMKETRKTVVPKVIVATPKVKEQDLVSRGREGITTKREQVQITQEKMRKEAE 606
Score = 28.1 bits (61), Expect = 1.9
Identities = 24/86 (27%), Positives = 36/86 (41%), Gaps = 10/86 (11%)
Query: 50 QSVTSVAEKTKEQANAVSEAVVSSVNTVATKTVEEAENI------AVTSGVVRKEDLRPS 103
Q V + E E +S VS N + +A + AV S + E L+PS
Sbjct: 4151 QKVEPITEPEVESKYLISTEEVSYFNVQSRVKYLDATPVTKGVASAVVSDEKQDESLKPS 4210
Query: 104 APQQEGEASKEKEEVA----EEAQSG 125
++E + EEVA +EA+ G
Sbjct: 4211 EEKEESSSESGTEEVATVKIQEAEGG 4236
Score = 26.2 bits (56), Expect = 7.2
Identities = 30/115 (26%), Positives = 49/115 (42%), Gaps = 13/115 (11%)
Query: 9 SIAKEGVVGAVEKTKQGVTEAAEKTKEGVMYVGAKTKENVVQSVTSVAEKTKEQANAVSE 68
S A E V ++ KQ A+K+ V A V + V S E+T ++ +
Sbjct: 403 SYAAEAVATGAKEVKQD----ADKSAAVATVVAAVDMARVREPVISAVEQTAQRTTTTAV 458
Query: 69 AVVSSVNTVATKTVEEAENIAVTSGVVRKEDLRPSAPQQEGEASKEKEEVAEEAQ 123
+ + V +EAE AVT VV + A +QE + S+ KE + + +
Sbjct: 459 HIQPAQEQVR----KEAEKTAVTKVVVAAD----KAKEQELK-SRTKEVITTKQE 504
>gi|28274705 family with sequence similarity 9, member A [Homo
sapiens]
Length = 332
Score = 35.0 bits (79), Expect = 0.016
Identities = 35/129 (27%), Positives = 57/129 (44%), Gaps = 15/129 (11%)
Query: 5 KKGFSIAKEGVV---GAVEKTKQGVTEAAEKT---KEGVMYVGAKTKENVVQSVTSVAEK 58
KKG + +E + A KTK + A +K ++ Y + NV++ +AEK
Sbjct: 128 KKGLAAKREMIKIDKAAYRKTKNTIERALKKKQLKRQKRDYRHTRKLLNVLKEY--IAEK 185
Query: 59 TKEQANAVSEAVVSSVNTVATKTVEEAENIAVTSGVVRKEDLRPSAPQQEGEASKEKEEV 118
K+ +EA ++ A AE A + V+ ED ++E E KE+EE
Sbjct: 186 QKDDEAEEAEAAAAAAEAAAA-----AEAAAAAAEVIVVED--EEEEEKEEEEEKEEEEE 238
Query: 119 AEEAQSGGD 127
E + GG+
Sbjct: 239 EGEEEGGGE 247
>gi|21493022 A kinase (PRKA) anchor protein 12 isoform 1 [Homo
sapiens]
Length = 1782
Score = 33.9 bits (76), Expect = 0.035
Identities = 37/131 (28%), Positives = 56/131 (42%), Gaps = 13/131 (9%)
Query: 10 IAKEGVVGAVEKTKQGVTEAAEKTKEGVMY--VGAKTKENVVQSVTSVAEKTKEQANAV- 66
+A E + + + Q E+A + + Y V ++E V S EK A V
Sbjct: 345 VASEKLTASEQAHPQEPAESAHEPRLSAEYEKVELPSEEQVSGSQGPSEEKPAPLATEVF 404
Query: 67 -------SEAVVSSVN--TVATKTVEEAENIAVTSGVVRKEDL-RPSAPQQEGEASKEKE 116
E VV+ V+ TV +T E+ + T+G V E+L A QE E +KE
Sbjct: 405 DEKIEVHQEEVVAEVHVSTVEERTEEQKTEVEETAGSVPAEELVEMDAEPQEAEPAKELV 464
Query: 117 EVAEEAQSGGD 127
++ E SG D
Sbjct: 465 KLKETCVSGED 475
Score = 26.6 bits (57), Expect = 5.5
Identities = 34/112 (30%), Positives = 47/112 (41%), Gaps = 18/112 (16%)
Query: 15 VVGAVEKTKQGVTEAAEKTKEGVMYVGAKTKENVVQSVTSVAEKTKEQANAVSEAVVSSV 74
VV E T + VT A E +GA+ S AE+T E +AVS+
Sbjct: 965 VVSEAELTPEAVTAA-----ETAGPLGAEEGTEA-----SAAEETTEMVSAVSQL----- 1009
Query: 75 NTVATKTVEEAENIAVTSGVVRKEDLRPSAPQQEGEASKEKEEVAEEAQSGG 126
T + T EEA + G V + + Q+ +A EK V EE+Q G
Sbjct: 1010 -TDSPDTTEEATPVQEVEGGVPDIEEQERRTQEVLQAVAEK--VKEESQLPG 1058
Score = 26.2 bits (56), Expect = 7.2
Identities = 12/41 (29%), Positives = 21/41 (51%)
Query: 80 KTVEEAENIAVTSGVVRKEDLRPSAPQQEGEASKEKEEVAE 120
K E+A+ + + G V E + PQ + E K++ E A+
Sbjct: 1736 KEKEDAQEVELQEGKVHSESDKAITPQAQEELQKQERESAK 1776
>gi|21493024 A kinase (PRKA) anchor protein 12 isoform 2 [Homo
sapiens]
Length = 1684
Score = 33.9 bits (76), Expect = 0.035
Identities = 37/131 (28%), Positives = 56/131 (42%), Gaps = 13/131 (9%)
Query: 10 IAKEGVVGAVEKTKQGVTEAAEKTKEGVMY--VGAKTKENVVQSVTSVAEKTKEQANAV- 66
+A E + + + Q E+A + + Y V ++E V S EK A V
Sbjct: 247 VASEKLTASEQAHPQEPAESAHEPRLSAEYEKVELPSEEQVSGSQGPSEEKPAPLATEVF 306
Query: 67 -------SEAVVSSVN--TVATKTVEEAENIAVTSGVVRKEDL-RPSAPQQEGEASKEKE 116
E VV+ V+ TV +T E+ + T+G V E+L A QE E +KE
Sbjct: 307 DEKIEVHQEEVVAEVHVSTVEERTEEQKTEVEETAGSVPAEELVEMDAEPQEAEPAKELV 366
Query: 117 EVAEEAQSGGD 127
++ E SG D
Sbjct: 367 KLKETCVSGED 377
Score = 26.6 bits (57), Expect = 5.5
Identities = 34/112 (30%), Positives = 47/112 (41%), Gaps = 18/112 (16%)
Query: 15 VVGAVEKTKQGVTEAAEKTKEGVMYVGAKTKENVVQSVTSVAEKTKEQANAVSEAVVSSV 74
VV E T + VT A E +GA+ S AE+T E +AVS+
Sbjct: 867 VVSEAELTPEAVTAA-----ETAGPLGAEEGTEA-----SAAEETTEMVSAVSQL----- 911
Query: 75 NTVATKTVEEAENIAVTSGVVRKEDLRPSAPQQEGEASKEKEEVAEEAQSGG 126
T + T EEA + G V + + Q+ +A EK V EE+Q G
Sbjct: 912 -TDSPDTTEEATPVQEVEGGVPDIEEQERRTQEVLQAVAEK--VKEESQLPG 960
Score = 26.2 bits (56), Expect = 7.2
Identities = 12/41 (29%), Positives = 21/41 (51%)
Query: 80 KTVEEAENIAVTSGVVRKEDLRPSAPQQEGEASKEKEEVAE 120
K E+A+ + + G V E + PQ + E K++ E A+
Sbjct: 1638 KEKEDAQEVELQEGKVHSESDKAITPQAQEELQKQERESAK 1678
>gi|122937195 plasma membrane associated protein, S3-12 [Homo
sapiens]
Length = 1357
Score = 33.5 bits (75), Expect = 0.045
Identities = 34/125 (27%), Positives = 50/125 (40%), Gaps = 4/125 (3%)
Query: 3 VFKKGFSIAKEGVVGAVEKTKQGVTEAAEKTKEGVMYVGAKTKENVVQSVT-SVAEKTKE 61
V + G + + G E GVT A + K G + G T + V+ +V+
Sbjct: 106 VVQGGLDTTRSALTGTKEVVSSGVTGAMDMAK-GAVQGGLDTSKAVLTGTKDTVSTGLTG 164
Query: 62 QANAVSEAVVSSVNTVATKTVEEAENIAVTSGVVRKEDLRPSAPQQEGEASKEKEEVAEE 121
N V + V+T TKTV VT+GV+ +L Q E SK ++
Sbjct: 165 AVNVAKGTVQAGVDT--TKTVLTGTKDTVTTGVMGAVNLAKGTVQTGVETSKAVLTGTKD 222
Query: 122 AQSGG 126
A S G
Sbjct: 223 AVSTG 227
Score = 25.8 bits (55), Expect = 9.4
Identities = 28/114 (24%), Positives = 41/114 (35%), Gaps = 9/114 (7%)
Query: 9 SIAKEGVVGAVEKTKQGVTEAAEKTKEGVMYVGAKTKENVVQSVTSVAEKTKEQANAVSE 68
++AK V V+ TK +T + GVM K V V + +AVS
Sbjct: 167 NVAKGTVQAGVDTTKTVLTGTKDTVTTGVMGAVNLAKGTVQTGVETSKAVLTGTKDAVST 226
Query: 69 AVVSSVNTV---------ATKTVEEAENIAVTSGVVRKEDLRPSAPQQEGEASK 113
+ +VN +KTV V SGV ++ Q + SK
Sbjct: 227 GLTGAVNVARGSIQTGVDTSKTVLTGTKDTVCSGVTGAMNVAKGTIQTGVDTSK 280
>gi|239756568 PREDICTED: similar to BCL2-associated transcription
factor 1 [Homo sapiens]
Length = 869
Score = 33.1 bits (74), Expect = 0.059
Identities = 21/82 (25%), Positives = 36/82 (43%)
Query: 44 TKENVVQSVTSVAEKTKEQANAVSEAVVSSVNTVATKTVEEAENIAVTSGVVRKEDLRPS 103
T E+ +Q + S+ KEQ + +S T K EE + + R+ D+ PS
Sbjct: 599 TSESFIQHIVSLVHHVKEQYFKSAAMTLSERFTSYQKATEEHSTRQKSPEIHRRIDISPS 658
Query: 104 APQQEGEASKEKEEVAEEAQSG 125
+++ + E+ EE Q G
Sbjct: 659 TLRKDTRLAGEERVFKEENQKG 680
>gi|169218320 PREDICTED: similar to BCL2-associated transcription
factor 1 isoform 2 [Homo sapiens]
Length = 869
Score = 33.1 bits (74), Expect = 0.059
Identities = 21/82 (25%), Positives = 36/82 (43%)
Query: 44 TKENVVQSVTSVAEKTKEQANAVSEAVVSSVNTVATKTVEEAENIAVTSGVVRKEDLRPS 103
T E+ +Q + S+ KEQ + +S T K EE + + R+ D+ PS
Sbjct: 599 TSESFIQHIVSLVHHVKEQYFKSAAMTLSERFTSYQKATEEHSTRQKSPEIHRRIDISPS 658
Query: 104 APQQEGEASKEKEEVAEEAQSG 125
+++ + E+ EE Q G
Sbjct: 659 TLRKDTRLAGEERVFKEENQKG 680
>gi|145309326 laminin, gamma 1 precursor [Homo sapiens]
Length = 1609
Score = 32.7 bits (73), Expect = 0.077
Identities = 31/127 (24%), Positives = 50/127 (39%), Gaps = 19/127 (14%)
Query: 11 AKEGVVGAVEKTKQGVTEAAEKTKEGVMYVG--------AKTKENVVQSVTSVAEKTKEQ 62
A E + + Q +TEA EKT+E +G AK K + + + S +K
Sbjct: 1383 AAEEALRKIPAINQTITEANEKTREAQQALGSAAADATEAKNKAHEAERIASAVQKNATS 1442
Query: 63 ANAVSEAVVSSVNTV------ATKTVEEAENIAVTSGVVRKEDLRPSAPQQEGEASKEKE 116
A +E + V + K ++EAE + RK+D G AS+ +
Sbjct: 1443 TKAEAERTFAEVTDLDNEVNNMLKQLQEAE-----KELKRKQDDADQDMMMAGMASQAAQ 1497
Query: 117 EVAEEAQ 123
E A+
Sbjct: 1498 EAEINAR 1504
>gi|218505787 protocadherin 15 isoform CD2-1 precursor [Homo sapiens]
Length = 1790
Score = 32.7 bits (73), Expect = 0.077
Identities = 34/122 (27%), Positives = 56/122 (45%), Gaps = 17/122 (13%)
Query: 11 AKEGVVGAVEKTKQGVTEAAEKTKEGVMYVGAKTKENVVQSVTSVAEK------TKEQAN 64
A E V + E++ TE +E+ E + ++T E +S T E+ ++E +
Sbjct: 1596 ATESTVESEEESSSDYTEYSEEESE---FSESETTEEESESETPSEEEESSTPESEESES 1652
Query: 65 AVSEAVVSSVNTVATKTVEEAENIAVTSGVVRKEDLRPSAPQQEGEASK-EKEEVAEEAQ 123
SE + N V + E + G RKE+ PQ+E + K E+EE +EE +
Sbjct: 1653 TESEGEKARKNIVLARRRPMVEEVKEVKG--RKEE-----PQEEQKEPKMEEEEHSEEEE 1705
Query: 124 SG 125
SG
Sbjct: 1706 SG 1707
>gi|210032580 SET domain containing 1B [Homo sapiens]
Length = 1923
Score = 32.0 bits (71), Expect = 0.13
Identities = 27/99 (27%), Positives = 45/99 (45%), Gaps = 22/99 (22%)
Query: 26 VTEAAEKTKEGVMYVGAKTKENVVQSVTSVAEKTKEQANAVSEAVVSSVNTVATKTVEEA 85
++EA+EK + G +E V VTS AE T ++ S SS + + + +E
Sbjct: 1083 LSEASEKDE------GDSDEEETVSIVTSKAEATSSSESSESSEFESSSESSPSSSEDEE 1136
Query: 86 ENIAVTSGVVRKEDLRPSAPQQEGEASKEKEEVAEEAQS 124
E +A ++E E +E+E VAEE+ +
Sbjct: 1137 EVVA----------------REEEEEEEEEEMVAEESMA 1159
>gi|34577059 adipose differentiation-related protein [Homo sapiens]
Length = 437
Score = 31.6 bits (70), Expect = 0.17
Identities = 31/123 (25%), Positives = 50/123 (40%), Gaps = 9/123 (7%)
Query: 1 MDVFKKGFSIAKEGVVGAVEKTKQGVTEAAEKTKEGVMYVGAKTKENVVQSVTSVAEKTK 60
+D ++ I + V K VT A K+ V K++V ++T V +KTK
Sbjct: 87 LDRIEERLPILNQPSTQIVANAKGAVTGA----KDAVTTTVTGAKDSVASTITGVMDKTK 142
Query: 61 EQANAVSE----AVVSSVNTVATKTVEEAENIAVTSGVVRKEDL-RPSAPQQEGEASKEK 115
E V S+NTV + + + V + + + E L P E E KE
Sbjct: 143 GAVTGSVEKTKSVVSGSINTVLGSRMMQLVSSGVENALTKSELLVEQYLPLTEEELEKEA 202
Query: 116 EEV 118
++V
Sbjct: 203 KKV 205
Score = 26.6 bits (57), Expect = 5.5
Identities = 18/73 (24%), Positives = 32/73 (43%), Gaps = 1/73 (1%)
Query: 15 VVGAVEKTKQGVTEAAEKTKEGVM-YVGAKTKENVVQSVTSVAEKTKEQANAVSEAVVSS 73
+ G ++KTK VT + EKTK V + ++Q V+S E ++ + E +
Sbjct: 134 ITGVMDKTKGAVTGSVEKTKSVVSGSINTVLGSRMMQLVSSGVENALTKSELLVEQYLPL 193
Query: 74 VNTVATKTVEEAE 86
K ++ E
Sbjct: 194 TEEELEKEAKKVE 206
>gi|13124879 smooth muscle myosin heavy chain 11 isoform SM1A [Homo
sapiens]
Length = 1972
Score = 31.6 bits (70), Expect = 0.17
Identities = 24/112 (21%), Positives = 52/112 (46%), Gaps = 7/112 (6%)
Query: 20 EKTKQGVTEAAEKTKEGVMY-------VGAKTKENVVQSVTSVAEKTKEQANAVSEAVVS 72
E+ ++ + AA+K EG + K +E ++ + + + K+ + +A S
Sbjct: 1608 ERKQRALAAAAKKKLEGDLKDLELQADSAIKGREEAIKQLRKLQAQMKDFQRELEDARAS 1667
Query: 73 SVNTVATKTVEEAENIAVTSGVVRKEDLRPSAPQQEGEASKEKEEVAEEAQS 124
AT E + ++ + +++ ++ +A + +A EKEE+AEE S
Sbjct: 1668 RDEIFATAKENEKKAKSLEADLMQLQEDLAAAERARKQADLEKEELAEELAS 1719
>gi|92091586 smooth muscle myosin heavy chain 11 isoform SM1B [Homo
sapiens]
Length = 1979
Score = 31.6 bits (70), Expect = 0.17
Identities = 24/112 (21%), Positives = 52/112 (46%), Gaps = 7/112 (6%)
Query: 20 EKTKQGVTEAAEKTKEGVMY-------VGAKTKENVVQSVTSVAEKTKEQANAVSEAVVS 72
E+ ++ + AA+K EG + K +E ++ + + + K+ + +A S
Sbjct: 1615 ERKQRALAAAAKKKLEGDLKDLELQADSAIKGREEAIKQLRKLQAQMKDFQRELEDARAS 1674
Query: 73 SVNTVATKTVEEAENIAVTSGVVRKEDLRPSAPQQEGEASKEKEEVAEEAQS 124
AT E + ++ + +++ ++ +A + +A EKEE+AEE S
Sbjct: 1675 RDEIFATAKENEKKAKSLEADLMQLQEDLAAAERARKQADLEKEELAEELAS 1726
>gi|92091583 smooth muscle myosin heavy chain 11 isoform SM2B [Homo
sapiens]
Length = 1945
Score = 31.6 bits (70), Expect = 0.17
Identities = 24/112 (21%), Positives = 52/112 (46%), Gaps = 7/112 (6%)
Query: 20 EKTKQGVTEAAEKTKEGVMY-------VGAKTKENVVQSVTSVAEKTKEQANAVSEAVVS 72
E+ ++ + AA+K EG + K +E ++ + + + K+ + +A S
Sbjct: 1615 ERKQRALAAAAKKKLEGDLKDLELQADSAIKGREEAIKQLRKLQAQMKDFQRELEDARAS 1674
Query: 73 SVNTVATKTVEEAENIAVTSGVVRKEDLRPSAPQQEGEASKEKEEVAEEAQS 124
AT E + ++ + +++ ++ +A + +A EKEE+AEE S
Sbjct: 1675 RDEIFATAKENEKKAKSLEADLMQLQEDLAAAERARKQADLEKEELAEELAS 1726
>gi|13124875 smooth muscle myosin heavy chain 11 isoform SM2A [Homo
sapiens]
Length = 1938
Score = 31.6 bits (70), Expect = 0.17
Identities = 24/112 (21%), Positives = 52/112 (46%), Gaps = 7/112 (6%)
Query: 20 EKTKQGVTEAAEKTKEGVMY-------VGAKTKENVVQSVTSVAEKTKEQANAVSEAVVS 72
E+ ++ + AA+K EG + K +E ++ + + + K+ + +A S
Sbjct: 1608 ERKQRALAAAAKKKLEGDLKDLELQADSAIKGREEAIKQLRKLQAQMKDFQRELEDARAS 1667
Query: 73 SVNTVATKTVEEAENIAVTSGVVRKEDLRPSAPQQEGEASKEKEEVAEEAQS 124
AT E + ++ + +++ ++ +A + +A EKEE+AEE S
Sbjct: 1668 RDEIFATAKENEKKAKSLEADLMQLQEDLAAAERARKQADLEKEELAEELAS 1719
>gi|105990539 neurofilament, light polypeptide 68kDa [Homo sapiens]
Length = 543
Score = 31.6 bits (70), Expect = 0.17
Identities = 19/67 (28%), Positives = 31/67 (46%), Gaps = 5/67 (7%)
Query: 66 VSEAVVSSVNTVATKTVEEAENIAVTSGVVR-----KEDLRPSAPQQEGEASKEKEEVAE 120
V E + T+ EEA++ + G KE+ +E EA+KE+ E A+
Sbjct: 447 VQEEQIEVEETIEAAKAEEAKDEPPSEGEAEEEEKDKEEAEEEEAAEEEEAAKEESEEAK 506
Query: 121 EAQSGGD 127
E + GG+
Sbjct: 507 EEEEGGE 513
>gi|117938254 BCL2-associated transcription factor 1 isoform 3 [Homo
sapiens]
Length = 747
Score = 31.2 bits (69), Expect = 0.22
Identities = 20/82 (24%), Positives = 35/82 (42%)
Query: 44 TKENVVQSVTSVAEKTKEQANAVSEAVVSSVNTVATKTVEEAENIAVTSGVVRKEDLRPS 103
T E+ +Q + S+ KEQ + ++ T K EE + + R+ D+ PS
Sbjct: 428 TSESFIQHIVSLVHHVKEQYFKSAAMTLNERFTSYQKATEEHSTRQKSPEIHRRIDISPS 487
Query: 104 APQQEGEASKEKEEVAEEAQSG 125
++ + E+ EE Q G
Sbjct: 488 TLRKHTRLAGEERVFKEENQKG 509
>gi|117938251 BCL2-associated transcription factor 1 isoform 2 [Homo
sapiens]
Length = 869
Score = 31.2 bits (69), Expect = 0.22
Identities = 20/82 (24%), Positives = 35/82 (42%)
Query: 44 TKENVVQSVTSVAEKTKEQANAVSEAVVSSVNTVATKTVEEAENIAVTSGVVRKEDLRPS 103
T E+ +Q + S+ KEQ + ++ T K EE + + R+ D+ PS
Sbjct: 599 TSESFIQHIVSLVHHVKEQYFKSAAMTLNERFTSYQKATEEHSTRQKSPEIHRRIDISPS 658
Query: 104 APQQEGEASKEKEEVAEEAQSG 125
++ + E+ EE Q G
Sbjct: 659 TLRKHTRLAGEERVFKEENQKG 680
>gi|7661958 BCL2-associated transcription factor 1 isoform 1 [Homo
sapiens]
Length = 920
Score = 31.2 bits (69), Expect = 0.22
Identities = 20/82 (24%), Positives = 35/82 (42%)
Query: 44 TKENVVQSVTSVAEKTKEQANAVSEAVVSSVNTVATKTVEEAENIAVTSGVVRKEDLRPS 103
T E+ +Q + S+ KEQ + ++ T K EE + + R+ D+ PS
Sbjct: 601 TSESFIQHIVSLVHHVKEQYFKSAAMTLNERFTSYQKATEEHSTRQKSPEIHRRIDISPS 660
Query: 104 APQQEGEASKEKEEVAEEAQSG 125
++ + E+ EE Q G
Sbjct: 661 TLRKHTRLAGEERVFKEENQKG 682
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.297 0.115 0.280
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,586,369
Number of Sequences: 37866
Number of extensions: 118536
Number of successful extensions: 774
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 76
Number of HSP's successfully gapped in prelim test: 77
Number of HSP's that attempted gapping in prelim test: 576
Number of HSP's gapped (non-prelim): 229
length of query: 127
length of database: 18,247,518
effective HSP length: 90
effective length of query: 37
effective length of database: 14,839,578
effective search space: 549064386
effective search space used: 549064386
T: 11
A: 40
X1: 17 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 44 (22.0 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.