Search of human proteins with 208609964

Search of human proteins with 208609964

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|208609964 RAB7, member RAS oncogene family-like 1 isoform 2
[Homo sapiens]
         (179 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|208609964 RAB7, member RAS oncogene family-like 1 isoform 2 [...   366   e-102
gi|208609962 RAB7, member RAS oncogene family-like 1 isoform 1 [...   352   7e-98
gi|4506375 RAB7, member RAS oncogene family-like 1 isoform 1 [Ho...   352   7e-98
gi|208609966 RAB7, member RAS oncogene family-like 1 isoform 3 [...   272   1e-73
gi|5803133 RAB32, member RAS oncogene family [Homo sapiens]           167   4e-42
gi|11641237 RAB38 [Homo sapiens]                                      164   5e-41
gi|4506363 RAB13, member RAS oncogene family [Homo sapiens]           102   1e-22
gi|169204777 PREDICTED: similar to RAB13, member RAS oncogene fa...   101   4e-22
gi|169205558 PREDICTED: similar to hCG24991 [Homo sapiens]            101   4e-22
gi|169204174 PREDICTED: similar to hCG24991 [Homo sapiens]            101   4e-22
gi|4759012 RAB9A, member RAS oncogene family [Homo sapiens]           100   7e-22
gi|33695095 ras-related GTP-binding protein RAB10 [Homo sapiens]       94   5e-20
gi|34147513 RAB7, member RAS oncogene family [Homo sapiens]            93   1e-19
gi|5803135 RAB35, member RAS oncogene family [Homo sapiens]            93   1e-19
gi|50234889 RAB43 protein [Homo sapiens]                               92   3e-19
gi|7706563 RAB8B, member RAS oncogene family [Homo sapiens]            92   3e-19
gi|106507164 RAB12, member RAS oncogene family [Homo sapiens]          92   3e-19
gi|4758988 RAB1A, member RAS oncogene family isoform 1 [Homo sap...    91   4e-19
gi|41393614 RAB5C, member RAS oncogene family isoform a [Homo sa...    91   4e-19
gi|41393545 RAB5C, member RAS oncogene family isoform b [Homo sa...    91   4e-19
gi|16933567 mel transforming oncogene [Homo sapiens]                   91   7e-19
gi|34485714 Ras-related protein Rab-23 [Homo sapiens]                  90   1e-18
gi|34485716 Ras-related protein Rab-23 [Homo sapiens]                  90   1e-18
gi|19923985 RAB3C, member RAS oncogene family [Homo sapiens]           89   2e-18
gi|19923262 RAB5A, member RAS oncogene family [Homo sapiens]           89   2e-18
gi|4758984 Ras-related protein Rab-11A [Homo sapiens]                  89   2e-18
gi|4506367 RAB3A, member RAS oncogene family [Homo sapiens]            88   3e-18
gi|7705963 RAB9B, member RAS oncogene family [Homo sapiens]            87   1e-17
gi|4759000 RAB3D, member RAS oncogene family [Homo sapiens]            87   1e-17
gi|190358517 RAB11B, member RAS oncogene family [Homo sapiens]         86   1e-17

>gi|208609964 RAB7, member RAS oncogene family-like 1 isoform 2
           [Homo sapiens]
          Length = 179

 Score =  366 bits (939), Expect = e-102
 Identities = 179/179 (100%), Positives = 179/179 (100%)

Query: 1   MGSRDHLFKVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVGGQERFTSMTRLYYRDASAC 60
           MGSRDHLFKVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVGGQERFTSMTRLYYRDASAC
Sbjct: 1   MGSRDHLFKVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVGGQERFTSMTRLYYRDASAC 60

Query: 61  VIMFDVTNATTFSNSQRWKQDLDSKLTLPNGEPVPCLLLANKCDLSPWAVSRDQIDRFSK 120
           VIMFDVTNATTFSNSQRWKQDLDSKLTLPNGEPVPCLLLANKCDLSPWAVSRDQIDRFSK
Sbjct: 61  VIMFDVTNATTFSNSQRWKQDLDSKLTLPNGEPVPCLLLANKCDLSPWAVSRDQIDRFSK 120

Query: 121 ENGFTGWTETSVKENKNINEAMRVLIEKMMRNSTEDIMSLSTQGDYINLQTKSSSWSCC 179
           ENGFTGWTETSVKENKNINEAMRVLIEKMMRNSTEDIMSLSTQGDYINLQTKSSSWSCC
Sbjct: 121 ENGFTGWTETSVKENKNINEAMRVLIEKMMRNSTEDIMSLSTQGDYINLQTKSSSWSCC 179


>gi|208609962 RAB7, member RAS oncogene family-like 1 isoform 1
           [Homo sapiens]
          Length = 203

 Score =  352 bits (904), Expect = 7e-98
 Identities = 179/203 (88%), Positives = 179/203 (88%), Gaps = 24/203 (11%)

Query: 1   MGSRDHLFKVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVG------------------- 41
           MGSRDHLFKVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVG                   
Sbjct: 1   MGSRDHLFKVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVGVDFALKVLQWSDYEIVRLQ 60

Query: 42  -----GQERFTSMTRLYYRDASACVIMFDVTNATTFSNSQRWKQDLDSKLTLPNGEPVPC 96
                GQERFTSMTRLYYRDASACVIMFDVTNATTFSNSQRWKQDLDSKLTLPNGEPVPC
Sbjct: 61  LWDIAGQERFTSMTRLYYRDASACVIMFDVTNATTFSNSQRWKQDLDSKLTLPNGEPVPC 120

Query: 97  LLLANKCDLSPWAVSRDQIDRFSKENGFTGWTETSVKENKNINEAMRVLIEKMMRNSTED 156
           LLLANKCDLSPWAVSRDQIDRFSKENGFTGWTETSVKENKNINEAMRVLIEKMMRNSTED
Sbjct: 121 LLLANKCDLSPWAVSRDQIDRFSKENGFTGWTETSVKENKNINEAMRVLIEKMMRNSTED 180

Query: 157 IMSLSTQGDYINLQTKSSSWSCC 179
           IMSLSTQGDYINLQTKSSSWSCC
Sbjct: 181 IMSLSTQGDYINLQTKSSSWSCC 203


>gi|4506375 RAB7, member RAS oncogene family-like 1 isoform 1 [Homo
           sapiens]
          Length = 203

 Score =  352 bits (904), Expect = 7e-98
 Identities = 179/203 (88%), Positives = 179/203 (88%), Gaps = 24/203 (11%)

Query: 1   MGSRDHLFKVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVG------------------- 41
           MGSRDHLFKVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVG                   
Sbjct: 1   MGSRDHLFKVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVGVDFALKVLQWSDYEIVRLQ 60

Query: 42  -----GQERFTSMTRLYYRDASACVIMFDVTNATTFSNSQRWKQDLDSKLTLPNGEPVPC 96
                GQERFTSMTRLYYRDASACVIMFDVTNATTFSNSQRWKQDLDSKLTLPNGEPVPC
Sbjct: 61  LWDIAGQERFTSMTRLYYRDASACVIMFDVTNATTFSNSQRWKQDLDSKLTLPNGEPVPC 120

Query: 97  LLLANKCDLSPWAVSRDQIDRFSKENGFTGWTETSVKENKNINEAMRVLIEKMMRNSTED 156
           LLLANKCDLSPWAVSRDQIDRFSKENGFTGWTETSVKENKNINEAMRVLIEKMMRNSTED
Sbjct: 121 LLLANKCDLSPWAVSRDQIDRFSKENGFTGWTETSVKENKNINEAMRVLIEKMMRNSTED 180

Query: 157 IMSLSTQGDYINLQTKSSSWSCC 179
           IMSLSTQGDYINLQTKSSSWSCC
Sbjct: 181 IMSLSTQGDYINLQTKSSSWSCC 203


>gi|208609966 RAB7, member RAS oncogene family-like 1 isoform 3
           [Homo sapiens]
          Length = 131

 Score =  272 bits (696), Expect = 1e-73
 Identities = 131/131 (100%), Positives = 131/131 (100%)

Query: 49  MTRLYYRDASACVIMFDVTNATTFSNSQRWKQDLDSKLTLPNGEPVPCLLLANKCDLSPW 108
           MTRLYYRDASACVIMFDVTNATTFSNSQRWKQDLDSKLTLPNGEPVPCLLLANKCDLSPW
Sbjct: 1   MTRLYYRDASACVIMFDVTNATTFSNSQRWKQDLDSKLTLPNGEPVPCLLLANKCDLSPW 60

Query: 109 AVSRDQIDRFSKENGFTGWTETSVKENKNINEAMRVLIEKMMRNSTEDIMSLSTQGDYIN 168
           AVSRDQIDRFSKENGFTGWTETSVKENKNINEAMRVLIEKMMRNSTEDIMSLSTQGDYIN
Sbjct: 61  AVSRDQIDRFSKENGFTGWTETSVKENKNINEAMRVLIEKMMRNSTEDIMSLSTQGDYIN 120

Query: 169 LQTKSSSWSCC 179
           LQTKSSSWSCC
Sbjct: 121 LQTKSSSWSCC 131


>gi|5803133 RAB32, member RAS oncogene family [Homo sapiens]
          Length = 225

 Score =  167 bits (423), Expect = 4e-42
 Identities = 86/208 (41%), Positives = 125/208 (60%), Gaps = 34/208 (16%)

Query: 3   SRDHLFKVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVG--------------------- 41
           +R+HLFKVLV+G+  VGKTS+++RY    FS+HY++T+G                     
Sbjct: 21  TREHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLW 80

Query: 42  ---GQERFTSMTRLYYRDASACVIMFDVTNATTFSNSQRWKQDLDSKLTLPNGEPVPCLL 98
              GQERF +MTR+YY++A    ++FD++ ++TF    +WK DLDSK+ LPNG P+P +L
Sbjct: 81  DIAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAVL 140

Query: 99  LANKCDLS-PWAVSRDQIDRFSKENGFTGWTETSVKENKNINEAMRVLIEKMM------R 151
           LANKCD +   + S  Q+D+F KE+GF GW ETS K+N NI EA R L+EK++       
Sbjct: 141 LANKCDQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKILVNHQSFP 200

Query: 152 NSTEDIMSLSTQGDYINLQTKSSSWSCC 179
           N   D+  +    + +  + KS    CC
Sbjct: 201 NEENDVDKIKLDQETLRAENKS---QCC 225


>gi|11641237 RAB38 [Homo sapiens]
          Length = 211

 Score =  164 bits (414), Expect = 5e-41
 Identities = 87/202 (43%), Positives = 123/202 (60%), Gaps = 28/202 (13%)

Query: 4   RDHLFKVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVG---------------------- 41
           ++HL+K+LV+GD  VGKTS+++RY   +FS HY++T+G                      
Sbjct: 6   KEHLYKLLVIGDLGVGKTSIIKRYVHQNFSSHYRATIGVDFALKVLHWDPETVVRLQLWD 65

Query: 42  --GQERFTSMTRLYYRDASACVIMFDVTNATTFSNSQRWKQDLDSKLTLPNGEPVPCLLL 99
             GQERF +MTR+YYR+A    I+FDVT   TF    +WK DLDSKL+LPNG+PV  +LL
Sbjct: 66  IAGQERFGNMTRVYYREAMGAFIVFDVTRPATFEAVAKWKNDLDSKLSLPNGKPVSVVLL 125

Query: 100 ANKCDLSPWAVSRD--QIDRFSKENGFTGWTETSVKENKNINEAMRVLIEKMMRNSTEDI 157
           ANKCD     +  +  ++D+F KE+GF GW ETS KEN NI+EA R L++ ++ N   D+
Sbjct: 126 ANKCDQGKDVLMNNGLKMDQFCKEHGFVGWFETSAKENINIDEASRCLVKHILANEC-DL 184

Query: 158 MSLSTQGDYINLQTKSSSWSCC 179
           M  S + D +     S+  + C
Sbjct: 185 ME-SIEPDVVKPHLTSTKVASC 205


>gi|4506363 RAB13, member RAS oncogene family [Homo sapiens]
          Length = 203

 Score =  102 bits (255), Expect = 1e-22
 Identities = 58/173 (33%), Positives = 95/173 (54%), Gaps = 29/173 (16%)

Query: 5   DHLFKVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVG----------------------- 41
           DHLFK+L++GD+ VGKT L+ R+++D+F+  Y ST+G                       
Sbjct: 6   DHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDTA 65

Query: 42  GQERFTSMTRLYYRDASACVIMFDVTNATTFSNSQRWKQDLDSKLTLPNGEPVPCLLLAN 101
           GQERF ++T  YYR A   ++++D+T+  +F N Q W + +    +      V  LLL N
Sbjct: 66  GQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENAS----AGVERLLLGN 121

Query: 102 KCDL-SPWAVSRDQIDRFSKENGFTGWTETSVKENKNINEAMRVLIEKMMRNS 153
           KCD+ +   V ++Q D+ ++E+G   + ETS K + N++EA   L   ++  S
Sbjct: 122 KCDMEAKRKVQKEQADKLAREHGIR-FFETSAKSSMNVDEAFSSLARDILLKS 173


>gi|169204777 PREDICTED: similar to RAB13, member RAS oncogene
           family [Homo sapiens]
          Length = 327

 Score =  101 bits (251), Expect = 4e-22
 Identities = 58/173 (33%), Positives = 94/173 (54%), Gaps = 29/173 (16%)

Query: 5   DHLFKVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVG----------------------- 41
           DHLFK+L++GD+ VGKT L+ R+++D+F+  Y ST+G                       
Sbjct: 130 DHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDTA 189

Query: 42  GQERFTSMTRLYYRDASACVIMFDVTNATTFSNSQRWKQDLDSKLTLPNGEPVPCLLLAN 101
           GQERF ++T  YYR A   ++ +D+T+  +F N Q W + +    +      V  LLL N
Sbjct: 190 GQERFKTITTAYYRGAMGIILAYDITDEKSFENIQNWMKSIMENAS----AGVEHLLLGN 245

Query: 102 KCDL-SPWAVSRDQIDRFSKENGFTGWTETSVKENKNINEAMRVLIEKMMRNS 153
           KCD+ +   V ++Q D+ ++E+G   + ETS K + N++EA   L   ++  S
Sbjct: 246 KCDMEAKRKVQKEQADKLAREHGIR-FFETSAKSSMNVDEAFSSLARDILLKS 297


>gi|169205558 PREDICTED: similar to hCG24991 [Homo sapiens]
          Length = 327

 Score =  101 bits (251), Expect = 4e-22
 Identities = 58/173 (33%), Positives = 94/173 (54%), Gaps = 29/173 (16%)

Query: 5   DHLFKVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVG----------------------- 41
           DHLFK+L++GD+ VGKT L+ R+++D+F+  Y ST+G                       
Sbjct: 130 DHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDTA 189

Query: 42  GQERFTSMTRLYYRDASACVIMFDVTNATTFSNSQRWKQDLDSKLTLPNGEPVPCLLLAN 101
           GQERF ++T  YYR A   ++ +D+T+  +F N Q W + +    +      V  LLL N
Sbjct: 190 GQERFKTITTAYYRGAMGIILAYDITDEKSFENIQNWMKSIMENAS----AGVEHLLLGN 245

Query: 102 KCDL-SPWAVSRDQIDRFSKENGFTGWTETSVKENKNINEAMRVLIEKMMRNS 153
           KCD+ +   V ++Q D+ ++E+G   + ETS K + N++EA   L   ++  S
Sbjct: 246 KCDMEAKRKVQKEQADKLAREHGIR-FFETSAKSSMNVDEAFSSLARDILLKS 297


>gi|169204174 PREDICTED: similar to hCG24991 [Homo sapiens]
          Length = 327

 Score =  101 bits (251), Expect = 4e-22
 Identities = 58/173 (33%), Positives = 94/173 (54%), Gaps = 29/173 (16%)

Query: 5   DHLFKVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVG----------------------- 41
           DHLFK+L++GD+ VGKT L+ R+++D+F+  Y ST+G                       
Sbjct: 130 DHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDTA 189

Query: 42  GQERFTSMTRLYYRDASACVIMFDVTNATTFSNSQRWKQDLDSKLTLPNGEPVPCLLLAN 101
           GQERF ++T  YYR A   ++ +D+T+  +F N Q W + +    +      V  LLL N
Sbjct: 190 GQERFKTITTAYYRGAMGIILAYDITDEKSFENIQNWMKSIMENAS----AGVEHLLLGN 245

Query: 102 KCDL-SPWAVSRDQIDRFSKENGFTGWTETSVKENKNINEAMRVLIEKMMRNS 153
           KCD+ +   V ++Q D+ ++E+G   + ETS K + N++EA   L   ++  S
Sbjct: 246 KCDMEAKRKVQKEQADKLAREHGIR-FFETSAKSSMNVDEAFSSLARDILLKS 297


>gi|4759012 RAB9A, member RAS oncogene family [Homo sapiens]
          Length = 201

 Score =  100 bits (249), Expect = 7e-22
 Identities = 61/203 (30%), Positives = 97/203 (47%), Gaps = 26/203 (12%)

Query: 1   MGSRDHLFKVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVG------------------- 41
           M  +  LFKV+++GD  VGK+SL+ RY  + F      T+G                   
Sbjct: 1   MAGKSSLFKVILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKDLEVDGHFVTMQI 60

Query: 42  ----GQERFTSMTRLYYRDASACVIMFDVTNATTFSNSQRWKQDLDSKLTLPNGEPVPCL 97
               GQERF S+   +YR +  C++ F V ++ +F N   WK++      +   E  P +
Sbjct: 61  WDTAGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFV 120

Query: 98  LLANKCDLSPWAVSRDQIDRFSKENGFTGWTETSVKENKNINEAMRVLIEKMMRNSTEDI 157
           +L NK D+S   VS ++   + ++NG   + ETS K+  N+  A    + +++  +TED 
Sbjct: 121 ILGNKIDISERQVSTEEAQAWCRDNGDYPYFETSAKDATNVAAAFEEAVRRVL--ATEDR 178

Query: 158 MSLSTQGDYINLQTK-SSSWSCC 179
                Q D +NL  K   S SCC
Sbjct: 179 SDHLIQTDTVNLHRKPKPSSSCC 201


>gi|33695095 ras-related GTP-binding protein RAB10 [Homo sapiens]
          Length = 200

 Score = 94.4 bits (233), Expect = 5e-20
 Identities = 57/173 (32%), Positives = 93/173 (53%), Gaps = 29/173 (16%)

Query: 5   DHLFKVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVG----------------------- 41
           D LFK+L++GD+ VGKT ++ R+S D+F+  + ST+G                       
Sbjct: 7   DLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTA 66

Query: 42  GQERFTSMTRLYYRDASACVIMFDVTNATTFSNSQRWKQDLDSKLTLPNGEPVPCLLLAN 101
           GQERF ++T  YYR A   ++++D+TN  +F N  +W +++D        E V  +LL N
Sbjct: 67  GQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHA----NEDVERMLLGN 122

Query: 102 KCDL-SPWAVSRDQIDRFSKENGFTGWTETSVKENKNINEAMRVLIEKMMRNS 153
           KCD+     V + +  + ++E+G   + ETS K N NI +A   L E ++R +
Sbjct: 123 KCDMDDKRVVPKGKGGQIAREHGIR-FFETSAKANINIEKAFLTLAEDILRKT 174


>gi|34147513 RAB7, member RAS oncogene family [Homo sapiens]
          Length = 207

 Score = 93.2 bits (230), Expect = 1e-19
 Identities = 58/174 (33%), Positives = 85/174 (48%), Gaps = 27/174 (15%)

Query: 7   LFKVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVG-----------------------GQ 43
           L KV+++GD+ VGKTSL+ +Y    FS  YK+T+G                       GQ
Sbjct: 8   LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQ 67

Query: 44  ERFTSMTRLYYRDASACVIMFDVTNATTFSNSQRWKQDLDSKLTLPNGEPVPCLLLANKC 103
           ERF S+   +YR A  CV++FDVT   TF     W+ +   + +  + E  P ++L NK 
Sbjct: 68  ERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKI 127

Query: 104 DLS--PWAVSRDQIDRFSKENGFTGWTETSVKENKNINEAMRVLIEKMMRNSTE 155
           DL     A  R Q   +SK N    + ETS KE  N+ +A + +    ++  TE
Sbjct: 128 DLENRQVATKRAQAWCYSKNN--IPYFETSAKEAINVEQAFQTIARNALKQETE 179


>gi|5803135 RAB35, member RAS oncogene family [Homo sapiens]
          Length = 201

 Score = 92.8 bits (229), Expect = 1e-19
 Identities = 63/203 (31%), Positives = 104/203 (51%), Gaps = 35/203 (17%)

Query: 5   DHLFKVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVG----------------------- 41
           DHLFK+L++GD+ VGK+SL+ R++ ++FS  Y +T+G                       
Sbjct: 6   DHLFKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEKVKLQIWDTA 65

Query: 42  GQERFTSMTRLYYRDASACVIMFDVTNATTFSNSQRWKQDLDSKLTLPNGEPVPCLLLAN 101
           GQERF ++T  YYR     ++++DVT+A +F N +RW  +++      N + V  +L+ N
Sbjct: 66  GQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEINQ-----NCDDVCRILVGN 120

Query: 102 K-CDLSPWAVSRDQIDRFSKENGFTGWTETSVKENKNINEAMRVLIEKMMRNSTEDI--M 158
           K  D     V  +   +F+ + G   + ETS KEN N+ E    + E ++R   +++   
Sbjct: 121 KNDDPERKVVETEDAYKFAGQMGIQLF-ETSAKENVNVEEMFNCITELVLRAKKDNLAKQ 179

Query: 159 SLSTQGDYINLQTKSSSWS--CC 179
               Q D + L TK+S     CC
Sbjct: 180 QQQQQNDVVKL-TKNSKRKKRCC 201


>gi|50234889 RAB43 protein [Homo sapiens]
          Length = 212

 Score = 91.7 bits (226), Expect = 3e-19
 Identities = 61/199 (30%), Positives = 96/199 (48%), Gaps = 29/199 (14%)

Query: 5   DHLFKVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVG----------------------- 41
           D LFK+++VGDA+VGKT +VQR+   +FS+   ST+G                       
Sbjct: 16  DFLFKLVLVGDASVGKTCVVQRFKTGAFSERQGSTIGVDFTMKTLEIQGKRVKLQIWDTA 75

Query: 42  GQERFTSMTRLYYRDASACVIMFDVTNATTFSNSQRWKQDLDSKLTLPNGEPVPCLLLAN 101
           GQERF ++T+ YYR A+  ++ +D+T  ++F +   W +D+        G  +  LL+ N
Sbjct: 76  GQERFRTITQSYYRSANGAILAYDITKRSSFLSVPHWIEDVRKYA----GSNIVQLLIGN 131

Query: 102 KCDLSPW-AVSRDQIDRFSKENGFTGWTETSVKENKNINEA-MRVLIEKMMRNSTEDIMS 159
           K DLS    VS  +    ++        ETS K++ N+ EA +RV  E +MR+       
Sbjct: 132 KSDLSELREVSLAEAQSLAEHYDILCAIETSAKDSSNVEEAFLRVATELIMRHGGPLFSE 191

Query: 160 LSTQGDYINLQTKSSSWSC 178
            S     +N +     W C
Sbjct: 192 KSPDHIQLNSKDIGEGWGC 210


>gi|7706563 RAB8B, member RAS oncogene family [Homo sapiens]
          Length = 207

 Score = 91.7 bits (226), Expect = 3e-19
 Identities = 53/170 (31%), Positives = 94/170 (55%), Gaps = 29/170 (17%)

Query: 5   DHLFKVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVG----------------------- 41
           D+LFK+L++GD+ VGKT L+ R+S+D+F+  + ST+G                       
Sbjct: 6   DYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDTA 65

Query: 42  GQERFTSMTRLYYRDASACVIMFDVTNATTFSNSQRWKQDLDSKLTLPNGEPVPCLLLAN 101
           GQERF ++T  YYR A   ++++D+TN  +F N + W ++++   +      V  ++L N
Sbjct: 66  GQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHAS----SDVERMILGN 121

Query: 102 KCDLS-PWAVSRDQIDRFSKENGFTGWTETSVKENKNINEAMRVLIEKMM 150
           KCD++    VS+++ ++ + + G   + ETS K + N+ EA   L   +M
Sbjct: 122 KCDMNDKRQVSKERGEKLAIDYGIK-FLETSAKSSANVEEAFFTLARDIM 170


>gi|106507164 RAB12, member RAS oncogene family [Homo sapiens]
          Length = 244

 Score = 91.7 bits (226), Expect = 3e-19
 Identities = 54/190 (28%), Positives = 96/190 (50%), Gaps = 28/190 (14%)

Query: 5   DHLFKVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVG----------------------- 41
           D   +V+++G   VGKTSL++R++ D+F +  KSTVG                       
Sbjct: 40  DFKLQVIIIGSRGVGKTSLMERFTDDTFCEACKSTVGVDFKIKTVELRGKKIRLQIWDTA 99

Query: 42  GQERFTSMTRLYYRDASACVIMFDVTNATTFSNSQRWKQDLDSKLTLPNGEPVPCLLLAN 101
           GQERF S+T  YYR A   ++++D+T   TF +  +W + +D   +    E    LL+ N
Sbjct: 100 GQERFNSITSAYYRSAKGIILVYDITKKETFDDLPKWMKMIDKYAS----EDAELLLVGN 155

Query: 102 KCDL-SPWAVSRDQIDRFSKENGFTGWTETSVKENKNINEAMRVLIEKMMRNSTEDIMSL 160
           K D  +   ++R Q ++F+++     + E S K+N N++E    L++ +++    DI+  
Sbjct: 156 KLDCETDREITRQQGEKFAQQITGMRFCEASAKDNFNVDEIFLKLVDDILKKMPLDILRN 215

Query: 161 STQGDYINLQ 170
                 ++LQ
Sbjct: 216 ELSNSILSLQ 225


>gi|4758988 RAB1A, member RAS oncogene family isoform 1 [Homo
           sapiens]
          Length = 205

 Score = 91.3 bits (225), Expect = 4e-19
 Identities = 57/202 (28%), Positives = 101/202 (50%), Gaps = 32/202 (15%)

Query: 5   DHLFKVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVG----------------------- 41
           D+LFK+L++GD+ VGK+ L+ R++ D++++ Y ST+G                       
Sbjct: 9   DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTA 68

Query: 42  GQERFTSMTRLYYRDASACVIMFDVTNATTFSNSQRWKQDLDSKLTLPNGEPVPCLLLAN 101
           GQERF ++T  YYR A   ++++DVT+  +F+N ++W Q++D   +    E V  LL+ N
Sbjct: 69  GQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYAS----ENVNKLLVGN 124

Query: 102 KCDL-SPWAVSRDQIDRFSKENGFTGWTETSVKENKNINEAMRVLIEKMMRNSTEDIMSL 160
           KCDL +   V       F+   G   + ETS K   N+ ++   +  ++ +       + 
Sbjct: 125 KCDLTTKKVVDYTTAKEFADSLGIP-FLETSAKNATNVEQSFMTMAAEIKKRMGPGATAG 183

Query: 161 STQGDYINLQT---KSSSWSCC 179
             +   + +Q+   K S   CC
Sbjct: 184 GAEKSNVKIQSTPVKQSGGGCC 205


>gi|41393614 RAB5C, member RAS oncogene family isoform a [Homo
           sapiens]
          Length = 216

 Score = 91.3 bits (225), Expect = 4e-19
 Identities = 58/204 (28%), Positives = 105/204 (51%), Gaps = 31/204 (15%)

Query: 2   GSRDHLFKVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVG-------------------- 41
           G++   FK++++G++AVGK+SLV R+ +  F ++ +ST+G                    
Sbjct: 16  GNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIW 75

Query: 42  ---GQERFTSMTRLYYRDASACVIMFDVTNATTFSNSQRWKQDLDSKLTLPNGEPVPCLL 98
              GQER+ S+  +YYR A A ++++D+TN  TF+ ++ W ++L  + + PN   +   L
Sbjct: 76  DTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQAS-PN---IVIAL 131

Query: 99  LANKCDL-SPWAVSRDQIDRFSKENGFTGWTETSVKENKNINEAMRVLIEKMMRNSTEDI 157
             NK DL S  AV   +   ++ +N    + ETS K   N+NE    + +K+ +N  ++ 
Sbjct: 132 AGNKADLASKRAVEFQEAQAYADDNSLL-FMETSAKTAMNVNEIFMAIAKKLPKNEPQNA 190

Query: 158 MSLSTQGDYINLQ--TKSSSWSCC 179
                +   ++LQ    +S   CC
Sbjct: 191 TGAPGRNRGVDLQENNPASRSQCC 214


>gi|41393545 RAB5C, member RAS oncogene family isoform b [Homo
           sapiens]
          Length = 216

 Score = 91.3 bits (225), Expect = 4e-19
 Identities = 58/204 (28%), Positives = 105/204 (51%), Gaps = 31/204 (15%)

Query: 2   GSRDHLFKVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVG-------------------- 41
           G++   FK++++G++AVGK+SLV R+ +  F ++ +ST+G                    
Sbjct: 16  GNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIW 75

Query: 42  ---GQERFTSMTRLYYRDASACVIMFDVTNATTFSNSQRWKQDLDSKLTLPNGEPVPCLL 98
              GQER+ S+  +YYR A A ++++D+TN  TF+ ++ W ++L  + + PN   +   L
Sbjct: 76  DTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQAS-PN---IVIAL 131

Query: 99  LANKCDL-SPWAVSRDQIDRFSKENGFTGWTETSVKENKNINEAMRVLIEKMMRNSTEDI 157
             NK DL S  AV   +   ++ +N    + ETS K   N+NE    + +K+ +N  ++ 
Sbjct: 132 AGNKADLASKRAVEFQEAQAYADDNSLL-FMETSAKTAMNVNEIFMAIAKKLPKNEPQNA 190

Query: 158 MSLSTQGDYINLQ--TKSSSWSCC 179
                +   ++LQ    +S   CC
Sbjct: 191 TGAPGRNRGVDLQENNPASRSQCC 214


>gi|16933567 mel transforming oncogene [Homo sapiens]
          Length = 207

 Score = 90.5 bits (223), Expect = 7e-19
 Identities = 59/204 (28%), Positives = 104/204 (50%), Gaps = 34/204 (16%)

Query: 5   DHLFKVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVG----------------------- 41
           D+LFK+L++GD+ VGKT ++ R+S+D+F+  + ST+G                       
Sbjct: 6   DYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTA 65

Query: 42  GQERFTSMTRLYYRDASACVIMFDVTNATTFSNSQRWKQDLDSKLTLPNGEPVPCLLLAN 101
           GQERF ++T  YYR A   ++++D+TN  +F N + W ++++   +      V  ++L N
Sbjct: 66  GQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHAS----ADVEKMILGN 121

Query: 102 KCDLS-PWAVSRDQIDRFSKENGFTGWTETSVKENKNINEAMRVLIEKMMRNSTEDIMSL 160
           KCD++    VS+++ ++ + + G   + ETS K N N+  A   L   +     + +   
Sbjct: 122 KCDVNDKRQVSKERGEKLALDYGIK-FMETSAKANINVENAFFTLARDIKAKMDKKLEGN 180

Query: 161 STQGDYINL-----QTKSSSWSCC 179
           S QG    +     Q K SS+  C
Sbjct: 181 SPQGSNQGVKITPDQQKRSSFFRC 204


>gi|34485714 Ras-related protein Rab-23 [Homo sapiens]
          Length = 237

 Score = 89.7 bits (221), Expect = 1e-18
 Identities = 55/173 (31%), Positives = 90/173 (52%), Gaps = 30/173 (17%)

Query: 9   KVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVG-----------------------GQER 45
           K++VVG+ AVGK+S++QRY +  F+K YK T+G                       GQE 
Sbjct: 11  KMVVVGNGAVGKSSMIQRYCKGIFTKDYKKTIGVDFLERQIQVNDEDVRLMLWDTAGQEE 70

Query: 46  FTSMTRLYYRDASACVIMFDVTNATTFSNSQRWKQDLDSKLTLPNGEPVPCLLLANKCD- 104
           F ++T+ YYR A ACV++F  T+  +F     W++    K+    G+ +P +L+ NK D 
Sbjct: 71  FDAITKAYYRGAQACVLVFSTTDRESFEAVSSWRE----KVVAEVGD-IPTVLVQNKIDL 125

Query: 105 LSPWAVSRDQIDRFSKENGFTGWTETSVKENKNINEAMRVLIEKMMRNSTEDI 157
           L    +  ++ +  +K      +  TSVKE+ N+NE  + L EK ++   + I
Sbjct: 126 LDDSCIKNEEAEALAKRLKLR-FYRTSVKEDLNVNEVFKYLAEKYLQKLKQQI 177


>gi|34485716 Ras-related protein Rab-23 [Homo sapiens]
          Length = 237

 Score = 89.7 bits (221), Expect = 1e-18
 Identities = 55/173 (31%), Positives = 90/173 (52%), Gaps = 30/173 (17%)

Query: 9   KVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVG-----------------------GQER 45
           K++VVG+ AVGK+S++QRY +  F+K YK T+G                       GQE 
Sbjct: 11  KMVVVGNGAVGKSSMIQRYCKGIFTKDYKKTIGVDFLERQIQVNDEDVRLMLWDTAGQEE 70

Query: 46  FTSMTRLYYRDASACVIMFDVTNATTFSNSQRWKQDLDSKLTLPNGEPVPCLLLANKCD- 104
           F ++T+ YYR A ACV++F  T+  +F     W++    K+    G+ +P +L+ NK D 
Sbjct: 71  FDAITKAYYRGAQACVLVFSTTDRESFEAVSSWRE----KVVAEVGD-IPTVLVQNKIDL 125

Query: 105 LSPWAVSRDQIDRFSKENGFTGWTETSVKENKNINEAMRVLIEKMMRNSTEDI 157
           L    +  ++ +  +K      +  TSVKE+ N+NE  + L EK ++   + I
Sbjct: 126 LDDSCIKNEEAEALAKRLKLR-FYRTSVKEDLNVNEVFKYLAEKYLQKLKQQI 177


>gi|19923985 RAB3C, member RAS oncogene family [Homo sapiens]
          Length = 227

 Score = 89.0 bits (219), Expect = 2e-18
 Identities = 51/177 (28%), Positives = 94/177 (53%), Gaps = 29/177 (16%)

Query: 5   DHLFKVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVG----------------------- 41
           D++FK+L++G+++VGKTS + RY+ DSF+  + STVG                       
Sbjct: 28  DYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFKNEKRIKLQIWDTA 87

Query: 42  GQERFTSMTRLYYRDASACVIMFDVTNATTFSNSQRWKQDLDSKLTLPNGEPVPCLLLAN 101
           GQER+ ++T  YYR A   ++M+D+TN  +F+  Q W     +++   + +    +L+ N
Sbjct: 88  GQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDW----STQIKTYSWDNAQVILVGN 143

Query: 102 KCDL-SPWAVSRDQIDRFSKENGFTGWTETSVKENKNINEAMRVLIEKMMRNSTEDI 157
           KCD+     +S ++     ++ GF  + ETS K+N N+ +    L++ +    +E +
Sbjct: 144 KCDMEDERVISTERGQHLGEQLGFE-FFETSAKDNINVKQTFERLVDIICDKMSESL 199


>gi|19923262 RAB5A, member RAS oncogene family [Homo sapiens]
          Length = 215

 Score = 89.0 bits (219), Expect = 2e-18
 Identities = 57/204 (27%), Positives = 108/204 (52%), Gaps = 31/204 (15%)

Query: 2   GSRDHLFKVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVG-------------------- 41
           G++   FK++++G++AVGK+SLV R+ +  F +  +ST+G                    
Sbjct: 15  GNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIW 74

Query: 42  ---GQERFTSMTRLYYRDASACVIMFDVTNATTFSNSQRWKQDLDSKLTLPNGEPVPCLL 98
              GQER+ S+  +YYR A A ++++D+TN  +F+ ++ W ++L  + + PN   +   L
Sbjct: 75  DTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQAS-PN---IVIAL 130

Query: 99  LANKCDL-SPWAVSRDQIDRFSKENGFTGWTETSVKENKNINEAMRVLIEKMMRNSTEDI 157
             NK DL +  AV   +   ++ +N    + ETS K + N+NE    + +K+ +N  ++ 
Sbjct: 131 SGNKADLANKRAVDFQEAQSYADDNSLL-FMETSAKTSMNVNEIFMAIAKKLPKNEPQNP 189

Query: 158 MSLSTQGDYINL--QTKSSSWSCC 179
            + S +G  ++L   T+ +   CC
Sbjct: 190 GANSARGRGVDLTEPTQPTRNQCC 213


>gi|4758984 Ras-related protein Rab-11A [Homo sapiens]
          Length = 216

 Score = 89.0 bits (219), Expect = 2e-18
 Identities = 57/197 (28%), Positives = 105/197 (53%), Gaps = 41/197 (20%)

Query: 1   MGSRD----HLFKVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVG--------------- 41
           MG+RD    +LFKV+++GD+ VGK++L+ R++++ F+   KST+G               
Sbjct: 1   MGTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTI 60

Query: 42  --------GQERFTSMTRLYYRDASACVIMFDVTNATTFSNSQRWKQDL----DSKLTLP 89
                   GQER+ ++T  YYR A   ++++D+    T+ N +RW ++L    DS + + 
Sbjct: 61  KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVI- 119

Query: 90  NGEPVPCLLLANKCDLSPW-AVSRDQIDRFSKENGFTGWTETSVKENKNINEAMRVLIEK 148
                  +L+ NK DL    AV  D+   F+++NG + + ETS  ++ N+  A + ++ +
Sbjct: 120 -------MLVGNKSDLRHLRAVPTDEARAFAEKNGLS-FIETSALDSTNVEAAFQTILTE 171

Query: 149 MMRNSTEDIMSLSTQGD 165
           + R  ++  MS   + D
Sbjct: 172 IYRIVSQKQMSDRREND 188


>gi|4506367 RAB3A, member RAS oncogene family [Homo sapiens]
          Length = 220

 Score = 88.2 bits (217), Expect = 3e-18
 Identities = 50/176 (28%), Positives = 90/176 (51%), Gaps = 27/176 (15%)

Query: 5   DHLFKVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVG----------------------- 41
           D++FK+L++G+++VGKTS + RY+ DSF+  + STVG                       
Sbjct: 20  DYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIWDTA 79

Query: 42  GQERFTSMTRLYYRDASACVIMFDVTNATTFSNSQRWKQDLDSKLTLPNGEPVPCLLLAN 101
           GQER+ ++T  YYR A   ++M+D+TN  +F+  Q W     +++   + +    LL+ N
Sbjct: 80  GQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDW----STQIKTYSWDNAQVLLVGN 135

Query: 102 KCDLSPWAVSRDQIDRFSKENGFTGWTETSVKENKNINEAMRVLIEKMMRNSTEDI 157
           KCD+    V   +  R   ++    + E S K+N N+ +    L++ +    +E +
Sbjct: 136 KCDMEDERVVSSERGRQLADHLGFEFFEASAKDNINVKQTFERLVDVICEKMSESL 191


>gi|7705963 RAB9B, member RAS oncogene family [Homo sapiens]
          Length = 201

 Score = 86.7 bits (213), Expect = 1e-17
 Identities = 54/202 (26%), Positives = 93/202 (46%), Gaps = 25/202 (12%)

Query: 1   MGSRDHLFKVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVG------------------- 41
           M  +  L KV+++GD  VGK+SL+ RY  + F      T+G                   
Sbjct: 1   MSGKSLLLKVILLGDGGVGKSSLMNRYVTNKFDSQAFHTIGVEFLNRDLEVDGRFVTLQI 60

Query: 42  ----GQERFTSMTRLYYRDASACVIMFDVTNATTFSNSQRWKQDLDSKLTLPNGEPVPCL 97
               GQERF S+   +YR A  C++ F V +  +F N   W+++      + + E  P +
Sbjct: 61  WDTAGQERFKSLRTPFYRGADCCLLTFSVDDRQSFENLGNWQKEFIYYADVKDPEHFPFV 120

Query: 98  LLANKCDLSPWAVSRDQIDRFSKENGFTGWTETSVKENKNINEAMRVLIEKMMRNSTEDI 157
           +L NK D     V+ ++   +  ENG   + ETS K++ N+  A    + +++  + E+ 
Sbjct: 121 VLGNKVDKEDRQVTTEEAQTWCMENGDYPYLETSAKDDTNVTVAFEEAVRQVL--AVEEQ 178

Query: 158 MSLSTQGDYINLQTKSSSWSCC 179
           +     G  I+L + S + S C
Sbjct: 179 LEHCMLGHTIDLNSGSKAGSSC 200


>gi|4759000 RAB3D, member RAS oncogene family [Homo sapiens]
          Length = 219

 Score = 86.7 bits (213), Expect = 1e-17
 Identities = 54/184 (29%), Positives = 93/184 (50%), Gaps = 29/184 (15%)

Query: 5   DHLFKVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVG----------------------- 41
           D++FK+L++G+++VGKTS + RY+ DSF+  + STVG                       
Sbjct: 20  DYMFKLLLIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTVYRHDKRIKLQIWDTA 79

Query: 42  GQERFTSMTRLYYRDASACVIMFDVTNATTFSNSQRWKQDLDSKLTLPNGEPVPCLLLAN 101
           GQER+ ++T  YYR A   ++M+D+ N  +F+  Q W     +++   + +    +L+ N
Sbjct: 80  GQERYRTITTAYYRGAMGFLLMYDIANQESFAAVQDWA----TQIKTYSWDNAQVILVGN 135

Query: 102 KCDL-SPWAVSRDQIDRFSKENGFTGWTETSVKENKNINEAMRVLIEKMMRNSTEDIMSL 160
           KCDL     V  +   R + + GF  + E S KEN N+ +    L++ +     E +   
Sbjct: 136 KCDLEDERVVPAEDGRRLADDLGFE-FFEASAKENINVKQVFERLVDVICEKMNESLEPS 194

Query: 161 STQG 164
           S+ G
Sbjct: 195 SSSG 198


>gi|190358517 RAB11B, member RAS oncogene family [Homo sapiens]
          Length = 218

 Score = 86.3 bits (212), Expect = 1e-17
 Identities = 54/183 (29%), Positives = 99/183 (54%), Gaps = 41/183 (22%)

Query: 1   MGSRD----HLFKVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVG--------------- 41
           MG+RD    +LFKV+++GD+ VGK++L+ R++++ F+   KST+G               
Sbjct: 1   MGTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTI 60

Query: 42  --------GQERFTSMTRLYYRDASACVIMFDVTNATTFSNSQRWKQDL----DSKLTLP 89
                   GQER+ ++T  YYR A   ++++D+    T+ N +RW ++L    DS + + 
Sbjct: 61  KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVI- 119

Query: 90  NGEPVPCLLLANKCDLSPW-AVSRDQIDRFSKENGFTGWTETSVKENKNINEAMRVLIEK 148
                  +L+ NK DL    AV  D+   F+++N  + + ETS  ++ N+ EA + ++ +
Sbjct: 120 -------MLVGNKSDLRHLRAVPTDEARAFAEKNNLS-FIETSALDSTNVEEAFKNILTE 171

Query: 149 MMR 151
           + R
Sbjct: 172 IYR 174


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.316    0.128    0.382 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,058,627
Number of Sequences: 37866
Number of extensions: 232166
Number of successful extensions: 970
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 164
Number of HSP's successfully gapped in prelim test: 56
Number of HSP's that attempted gapping in prelim test: 618
Number of HSP's gapped (non-prelim): 235
length of query: 179
length of database: 18,247,518
effective HSP length: 96
effective length of query: 83
effective length of database: 14,612,382
effective search space: 1212827706
effective search space used: 1212827706
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.