Guide to the Human Genome
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Name: OASL Sequence: fasta or formatted (514aa) NCBI GI: 11321577
Description:

2'-5'-oligoadenylate synthetase-like isoform a

Referenced in:

Interferon
Ubiquitin and Related Protein Modifications

Other entries for this name:
alt prot [255aa] 2'-5'-oligoadenylate synthetase-like isoform b
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.3         27           2
 C cysteine            1.8          9           2
 D aspartate           4.9         25           1
 E glutamate           7.0         36           2
 F phenylalanine       3.9         20           1
 G glycine             5.4         28           2
 H histidine           2.1         11           2
 I isoleucine          5.4         28           2
 K lysine              5.8         30           3
 L leucine            11.7         60           3
 M methionine          1.4          7           1
 N asparagine          3.1         16           1
 P proline             5.6         29           3
 Q glutamine           6.8         35           3
 R arginine            6.4         33           2
 S serine              6.0         31           2
 T threonine           4.5         23           2
 V valine              6.8         35           2
 W tryptophan          1.9         10           1
 Y tyrosine            4.1         21           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   2'-5'-oligoadenylate synthetase-like isoform a [Homo... 
OASL                  0.412   2'-5'-oligoadenylate synthetase-like isoform b [Homo...
OAS3                  0.236   2'-5'oligoadenylate synthetase 3 
OAS1                  0.210   2',5'-oligoadenylate synthetase 1 isoform 3 
OAS1                  0.210   2',5'-oligoadenylate synthetase 1 isoform 1 
OAS1                  0.210   2',5'-oligoadenylate synthetase 1 isoform 2 
OAS2                  0.199   2'-5'-oligoadenylate synthetase 2 isoform 2 
OAS2                  0.199   2'-5'-oligoadenylate synthetase 2 isoform 1 
UBC                   0.047   ubiquitin C 
UBB                   0.045   ubiquitin B precursor 
RPS27A                0.025   ubiquitin and ribosomal protein S27a precursor [Hom...
RPS27A                0.025   ubiquitin and ribosomal protein S27a precursor 
UBA52                 0.025   ubiquitin and ribosomal protein L40 precursor 
UBA52                 0.025   ubiquitin and ribosomal protein L40 precursor 
ISG15                 0.024   ISG15 ubiquitin-like modifier 
OAS2                  0.023   2'-5'-oligoadenylate synthetase 2 isoform 3 
LOC100128355          0.023   PREDICTED: similar to hCG1790904 
LOC100128355          0.023   PREDICTED: similar to hCG1790904 
LOC100128355          0.023   PREDICTED: similar to hCG1790904 
UBD                   0.018   ubiquitin D 
BAT3                  0.011   HLA-B associated transcript-3 isoform b 
BAT3                  0.011   HLA-B associated transcript-3 isoform b 
BAT3                  0.011   HLA-B associated transcript-3 isoform b 
BAT3                  0.011   HLA-B associated transcript-3 isoform a 
RAD23B                0.010   UV excision repair protein RAD23 homolog B 
UBL4A                 0.010   ubiquitin-like 4 
NEDD8                 0.009   neural precursor cell expressed, developmentally down...
BZRAP1                0.007   peripheral benzodiazepine receptor-associated prote...
BZRAP1                0.007   peripheral benzodiazepine receptor-associated prote...
ZNF193                0.006   zinc finger protein 193 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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