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Search of human proteins with 207113130
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|207113130 pseudouridylate synthase 10 [Homo sapiens]
(529 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|207113130 pseudouridylate synthase 10 [Homo sapiens] 1071 0.0
gi|45505178 cancer antigen 1 [Homo sapiens] 40 0.007
gi|55925574 adenosine monophosphate deaminase 2 (isoform L) isof... 36 0.076
gi|34147621 adenosine monophosphate deaminase 2 (isoform L) isof... 36 0.076
gi|21264318 adenosine monophosphate deaminase 2 (isoform L) isof... 36 0.076
gi|114155142 nuclear pore complex-associated protein TPR [Homo s... 33 0.49
gi|46240864 sperm associated antigen 17 [Homo sapiens] 32 1.4
gi|30520377 CUB and zona pellucida-like domains 1 [Homo sapiens] 32 1.9
gi|80861486 granule cell antiserum positive 14 [Homo sapiens] 31 2.5
gi|217416374 hypothetical protein LOC92749 [Homo sapiens] 31 2.5
gi|55770834 centromere protein F [Homo sapiens] 31 2.5
gi|225735629 disco-interacting protein 2A isoform g [Homo sapiens] 31 3.2
gi|45827692 disco-interacting protein 2A isoform a [Homo sapiens] 31 3.2
gi|19924131 RAD50 homolog isoform 2 [Homo sapiens] 31 3.2
gi|19924129 RAD50 homolog isoform 1 [Homo sapiens] 31 3.2
gi|225735627 disco-interacting protein 2A isoform f [Homo sapiens] 31 3.2
gi|225735625 disco-interacting protein 2A isoform e [Homo sapiens] 31 3.2
gi|45827698 disco-interacting protein 2A isoform d [Homo sapiens] 31 3.2
gi|45827696 disco-interacting protein 2A isoform c [Homo sapiens] 31 3.2
gi|45827694 disco-interacting protein 2A isoform b [Homo sapiens] 31 3.2
gi|32401441 GLI-Kruppel family member HKR1 [Homo sapiens] 31 3.2
gi|150010558 myosin, heavy polypeptide 15 [Homo sapiens] 30 4.2
gi|151101140 coiled-coil domain containing 2 isoform a [Homo sap... 30 4.2
gi|151105223 coiled-coil domain containing 2 isoform a [Homo sap... 30 4.2
gi|151105229 coiled-coil domain containing 2 isoform a [Homo sap... 30 4.2
gi|20336205 transcriptional regulator ATRX isoform 2 [Homo sapiens] 30 5.5
gi|20336209 transcriptional regulator ATRX isoform 1 [Homo sapiens] 30 5.5
gi|195947382 Rab interacting lysosomal protein-like 1 [Homo sapi... 30 5.5
gi|157785668 coiled-coil domain containing 39 [Homo sapiens] 30 5.5
gi|27764882 leprecan-like 1 isoform a [Homo sapiens] 30 7.1
>gi|207113130 pseudouridylate synthase 10 [Homo sapiens]
Length = 529
Score = 1071 bits (2770), Expect = 0.0
Identities = 529/529 (100%), Positives = 529/529 (100%)
Query: 1 MFPLTEENKHVAQLLLNTGTCPRCIFRFCGVDFHAPYKLPYKELLNELQKFLETEKDELI 60
MFPLTEENKHVAQLLLNTGTCPRCIFRFCGVDFHAPYKLPYKELLNELQKFLETEKDELI
Sbjct: 1 MFPLTEENKHVAQLLLNTGTCPRCIFRFCGVDFHAPYKLPYKELLNELQKFLETEKDELI 60
Query: 61 LEVMNPPPKKIRLQELEDSIDNLSQNGEGRISVSHVGSTASKNSNLNVCNVCLGILQEFC 120
LEVMNPPPKKIRLQELEDSIDNLSQNGEGRISVSHVGSTASKNSNLNVCNVCLGILQEFC
Sbjct: 61 LEVMNPPPKKIRLQELEDSIDNLSQNGEGRISVSHVGSTASKNSNLNVCNVCLGILQEFC 120
Query: 121 EKDFIKKVCQKVEASGFEFTSLVFSVSFPPQLSVREHAAWLLVKQEMGKQSLSLGRDDIV 180
EKDFIKKVCQKVEASGFEFTSLVFSVSFPPQLSVREHAAWLLVKQEMGKQSLSLGRDDIV
Sbjct: 121 EKDFIKKVCQKVEASGFEFTSLVFSVSFPPQLSVREHAAWLLVKQEMGKQSLSLGRDDIV 180
Query: 181 QLKEAYKWITHPLFSEELGVPIDGKSLFEVSVVFAHPETVEDCHFLAAICPDCFKPAKNK 240
QLKEAYKWITHPLFSEELGVPIDGKSLFEVSVVFAHPETVEDCHFLAAICPDCFKPAKNK
Sbjct: 181 QLKEAYKWITHPLFSEELGVPIDGKSLFEVSVVFAHPETVEDCHFLAAICPDCFKPAKNK 240
Query: 241 QSVFTRMAVMKALNKIKEEDFLKQFPCPPNSPKAVCAVLEIECAHGAVFVAGRYNKYSRN 300
QSVFTRMAVMKALNKIKEEDFLKQFPCPPNSPKAVCAVLEIECAHGAVFVAGRYNKYSRN
Sbjct: 241 QSVFTRMAVMKALNKIKEEDFLKQFPCPPNSPKAVCAVLEIECAHGAVFVAGRYNKYSRN 300
Query: 301 LPQTPWIIDGERKLESSVEELISDHLLAVFKAESFNFSSSGREDVDVRTLGNGRPFAIEL 360
LPQTPWIIDGERKLESSVEELISDHLLAVFKAESFNFSSSGREDVDVRTLGNGRPFAIEL
Sbjct: 301 LPQTPWIIDGERKLESSVEELISDHLLAVFKAESFNFSSSGREDVDVRTLGNGRPFAIEL 360
Query: 361 VNPHRVHFTSQEIKELQQKINNSSNKIQVRDLQLVTREAIGHMKEGEEEKTKTYSALIWT 420
VNPHRVHFTSQEIKELQQKINNSSNKIQVRDLQLVTREAIGHMKEGEEEKTKTYSALIWT
Sbjct: 361 VNPHRVHFTSQEIKELQQKINNSSNKIQVRDLQLVTREAIGHMKEGEEEKTKTYSALIWT 420
Query: 421 NKAIQKKDIEFLNDIKDLKIDQKTPLRVLHRRPLAVRARVIHFMETQYVDEHHFRLHLKT 480
NKAIQKKDIEFLNDIKDLKIDQKTPLRVLHRRPLAVRARVIHFMETQYVDEHHFRLHLKT
Sbjct: 421 NKAIQKKDIEFLNDIKDLKIDQKTPLRVLHRRPLAVRARVIHFMETQYVDEHHFRLHLKT 480
Query: 481 QAGTYIKEFVHGDFGRTKPNIGSLMNVTADILELDVESVDVDWPPALDD 529
QAGTYIKEFVHGDFGRTKPNIGSLMNVTADILELDVESVDVDWPPALDD
Sbjct: 481 QAGTYIKEFVHGDFGRTKPNIGSLMNVTADILELDVESVDVDWPPALDD 529
>gi|45505178 cancer antigen 1 [Homo sapiens]
Length = 641
Score = 39.7 bits (91), Expect = 0.007
Identities = 51/261 (19%), Positives = 108/261 (41%), Gaps = 23/261 (8%)
Query: 231 PDCFKPAKNKQSVFTRMAVMKALNKIKEEDFLKQFPCPPNSPKAVCAVLEIECAHGAVFV 290
PD + A++ Q V MA+ + L K+K + K + E++C++ +++
Sbjct: 151 PDWEQSAESLQPVQEDMALNEVLQKLKH-----------TNRKQEVRIQELQCSN--LYL 197
Query: 291 AGRYNKYSRNLPQTPWIIDGERKLESSVEELISDHLLAVFKAESFNFSSSGREDVDVRT- 349
R + + + ID KL+ +VEELI D + + + E+V T
Sbjct: 198 EKRVKELQMKITKQQVFIDVINKLKENVEELIEDKYKIILEKNDTKKTLQNLEEVLANTQ 257
Query: 350 --LGNGR------PFAIELVNPHRVHFTSQEIKELQQKINNSSNKIQVRDLQLVTREAIG 401
L R + + + V + + E+QQK + S +++ E +
Sbjct: 258 KHLQESRNDKEMLQLQFKKIKANYVCLQERYMTEMQQKNKSVSQYLEMDKTLSKKEEEVE 317
Query: 402 HMKEGEEEKTK-TYSALIWTNKAIQKKDIEFLNDIKDLKIDQKTPLRVLHRRPLAVRARV 460
+++ ++E K T SAL + + ++ EFL+ ++ + +K L + + +
Sbjct: 318 RLQQLKKELEKATASALDLLKREKEAQEQEFLSLQEEFQKLEKENLEERQKLKSRLEKLL 377
Query: 461 IHFMETQYVDEHHFRLHLKTQ 481
Q++ E+ ++K Q
Sbjct: 378 TQVRNLQFMSENERTKNIKLQ 398
>gi|55925574 adenosine monophosphate deaminase 2 (isoform L) isoform
3 [Homo sapiens]
Length = 760
Score = 36.2 bits (82), Expect = 0.076
Identities = 26/93 (27%), Positives = 43/93 (46%), Gaps = 6/93 (6%)
Query: 432 LNDIKDLKIDQKTPLRVLHRRPLAVRARVIHFMETQYVDEHHFRLHLKTQAGTYIKEFVH 491
LN++K+L +K P HR +R H + +++ H +K +++E VH
Sbjct: 273 LNEMKELAAQKKVP----HRDFYNIRKVDTHIHASSCMNQKHLLRFIKRAMKRHLEEIVH 328
Query: 492 GDFGR--TKPNIGSLMNVTADILELDVESVDVD 522
+ GR T + MN+TA L +D V D
Sbjct: 329 VEQGREQTLREVFESMNLTAYDLSVDTLDVHAD 361
>gi|34147621 adenosine monophosphate deaminase 2 (isoform L) isoform
2 [Homo sapiens]
Length = 798
Score = 36.2 bits (82), Expect = 0.076
Identities = 26/93 (27%), Positives = 43/93 (46%), Gaps = 6/93 (6%)
Query: 432 LNDIKDLKIDQKTPLRVLHRRPLAVRARVIHFMETQYVDEHHFRLHLKTQAGTYIKEFVH 491
LN++K+L +K P HR +R H + +++ H +K +++E VH
Sbjct: 311 LNEMKELAAQKKVP----HRDFYNIRKVDTHIHASSCMNQKHLLRFIKRAMKRHLEEIVH 366
Query: 492 GDFGR--TKPNIGSLMNVTADILELDVESVDVD 522
+ GR T + MN+TA L +D V D
Sbjct: 367 VEQGREQTLREVFESMNLTAYDLSVDTLDVHAD 399
>gi|21264318 adenosine monophosphate deaminase 2 (isoform L) isoform
1 [Homo sapiens]
Length = 879
Score = 36.2 bits (82), Expect = 0.076
Identities = 26/93 (27%), Positives = 43/93 (46%), Gaps = 6/93 (6%)
Query: 432 LNDIKDLKIDQKTPLRVLHRRPLAVRARVIHFMETQYVDEHHFRLHLKTQAGTYIKEFVH 491
LN++K+L +K P HR +R H + +++ H +K +++E VH
Sbjct: 392 LNEMKELAAQKKVP----HRDFYNIRKVDTHIHASSCMNQKHLLRFIKRAMKRHLEEIVH 447
Query: 492 GDFGR--TKPNIGSLMNVTADILELDVESVDVD 522
+ GR T + MN+TA L +D V D
Sbjct: 448 VEQGREQTLREVFESMNLTAYDLSVDTLDVHAD 480
>gi|114155142 nuclear pore complex-associated protein TPR [Homo
sapiens]
Length = 2363
Score = 33.5 bits (75), Expect = 0.49
Identities = 18/75 (24%), Positives = 38/75 (50%), Gaps = 7/75 (9%)
Query: 365 RVHFTSQEIKELQQKINNSSNKIQVRDLQLVTREAIGHMKEGEEEKTKTYSALIWTNKAI 424
RV +E++ELQ +N K+QV + E + +KT+T + ++ TNK +
Sbjct: 1227 RVELLERELQELQDSLNAEREKVQVTAKTMAQHEEL-------MKKTETMNVVMETNKML 1279
Query: 425 QKKDIEFLNDIKDLK 439
+++ D++ ++
Sbjct: 1280 REEKERLEQDLQQMQ 1294
>gi|46240864 sperm associated antigen 17 [Homo sapiens]
Length = 2223
Score = 32.0 bits (71), Expect = 1.4
Identities = 24/92 (26%), Positives = 45/92 (48%), Gaps = 14/92 (15%)
Query: 34 HAPYKLPYKELLNELQKFLETEKDELILEVMNPPPKKIRLQELEDSIDNLSQNGEGRISV 93
+ P K+P + LL ++ EK +L +++ PK L +++DS+ G+++
Sbjct: 2006 YEPVKIPTQSLLQDVAGQTRKEKVKLPHYLLSSKPKSQPLAKVQDSVG-------GKVNT 2058
Query: 94 SHVGSTASKNS-------NLNVCNVCLGILQE 118
S V S A N+ +L +V G+L+E
Sbjct: 2059 SSVASAAINNAKSSLFGFHLLPSSVKFGVLKE 2090
>gi|30520377 CUB and zona pellucida-like domains 1 [Homo sapiens]
Length = 607
Score = 31.6 bits (70), Expect = 1.9
Identities = 28/104 (26%), Positives = 49/104 (47%), Gaps = 9/104 (8%)
Query: 91 ISVSHVGSTASKNSNLNV----CNVCLGILQEFCEKDFIKKVCQKVEASGFEFTSLV-FS 145
IS S++ + S +NL + C L + EF +KVE +T+++ FS
Sbjct: 286 ISKSYLEAFNSNGNNLQLKDPTCRPKLSNVVEFSVPLNGCGTIRKVEDQSITYTNIITFS 345
Query: 146 VSFPPQLSVREHAAWLLVKQEMGKQS----LSLGRDDIVQLKEA 185
S ++ R+ ++VK EMG S + + DD++Q + A
Sbjct: 346 ASSTSEVITRQKQLQIIVKCEMGHNSTVEIIYITEDDVIQSQNA 389
>gi|80861486 granule cell antiserum positive 14 [Homo sapiens]
Length = 834
Score = 31.2 bits (69), Expect = 2.5
Identities = 18/40 (45%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Query: 372 EIKELQQKINNSSNKIQVRDLQLVTREAIGHMKEGEEEKT 411
EIK+L+ +I KIQ+ +LQL T+ I H K EE+ T
Sbjct: 723 EIKQLKDEIKKKDEKIQLLELQLATQH-ICHQKCKEEKCT 761
>gi|217416374 hypothetical protein LOC92749 [Homo sapiens]
Length = 740
Score = 31.2 bits (69), Expect = 2.5
Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 10/70 (14%)
Query: 355 PFAIELVNPHRVHFTSQEIKELQQKINNSSNKIQVRDLQLVT------REAIGH----MK 404
P ++E ++P+ S +I +NS +IQ R L++ REA+G K
Sbjct: 4 PGSLEALDPNVDEHLSTQILAPSVHSDNSQERIQARRLRIAARLEARRREALGEYLDGKK 63
Query: 405 EGEEEKTKTY 414
E EE+++K+Y
Sbjct: 64 ESEEDQSKSY 73
>gi|55770834 centromere protein F [Homo sapiens]
Length = 3114
Score = 31.2 bits (69), Expect = 2.5
Identities = 33/137 (24%), Positives = 61/137 (44%), Gaps = 25/137 (18%)
Query: 369 TSQE--IKELQQKINNSSN-------KIQVRDLQ---------LVTREAIGHMKEGEEEK 410
TSQE +++LQ+KIN N K+ V DL+ L RE + K
Sbjct: 531 TSQETMLRDLQEKINQQENSLTLEKLKLAVADLEKQRDCSQDLLKKREHHIEQLNDKLSK 590
Query: 411 TKTYSALIWTNKAIQKKDIEFLNDIKDL----KIDQKTPLRVLHRRPLAVRARVIHF--- 463
T+ S + + ++KK+ E L + K L K + + L + +++++ H
Sbjct: 591 TEKESKALLSALELKKKEYEELKEEKTLFSCWKSENEKLLTQMESEKENLQSKINHLETC 650
Query: 464 METQYVDEHHFRLHLKT 480
++TQ + H + ++T
Sbjct: 651 LKTQQIKSHEYNERVRT 667
>gi|225735629 disco-interacting protein 2A isoform g [Homo sapiens]
Length = 1567
Score = 30.8 bits (68), Expect = 3.2
Identities = 21/78 (26%), Positives = 33/78 (42%)
Query: 66 PPPKKIRLQELEDSIDNLSQNGEGRISVSHVGSTASKNSNLNVCNVCLGILQEFCEKDFI 125
PPP+K L S + + E ++SV V NVC V L C+ D +
Sbjct: 682 PPPRKAVLSMNGLSYGVIRVDTEEKLSVLTVQDVGQVMPGANVCVVKLEGTPYLCKTDEV 741
Query: 126 KKVCQKVEASGFEFTSLV 143
++C A+G + L+
Sbjct: 742 GEICVSSSATGTAYYGLL 759
>gi|45827692 disco-interacting protein 2A isoform a [Homo sapiens]
Length = 1571
Score = 30.8 bits (68), Expect = 3.2
Identities = 21/78 (26%), Positives = 33/78 (42%)
Query: 66 PPPKKIRLQELEDSIDNLSQNGEGRISVSHVGSTASKNSNLNVCNVCLGILQEFCEKDFI 125
PPP+K L S + + E ++SV V NVC V L C+ D +
Sbjct: 686 PPPRKAVLSMNGLSYGVIRVDTEEKLSVLTVQDVGQVMPGANVCVVKLEGTPYLCKTDEV 745
Query: 126 KKVCQKVEASGFEFTSLV 143
++C A+G + L+
Sbjct: 746 GEICVSSSATGTAYYGLL 763
>gi|19924131 RAD50 homolog isoform 2 [Homo sapiens]
Length = 1173
Score = 30.8 bits (68), Expect = 3.2
Identities = 23/83 (27%), Positives = 45/83 (54%), Gaps = 8/83 (9%)
Query: 372 EIKELQQKINNSSNKIQVRDLQLVTREAIGHMKEGEEEKTKTYSALIWTNKAI---QKKD 428
E+K++++KI + K+Q DL T + + K+ ++ K T S+ I N+ + Q++
Sbjct: 662 ELKDVERKIAQQAAKLQGIDLDR-TVQQVNQEKQEKQHKLDTVSSKIELNRKLIQDQQEQ 720
Query: 429 IEFL----NDIKDLKIDQKTPLR 447
I+ L N++K K+ T L+
Sbjct: 721 IQHLKSTTNELKSEKLQISTNLQ 743
>gi|19924129 RAD50 homolog isoform 1 [Homo sapiens]
Length = 1312
Score = 30.8 bits (68), Expect = 3.2
Identities = 23/83 (27%), Positives = 45/83 (54%), Gaps = 8/83 (9%)
Query: 372 EIKELQQKINNSSNKIQVRDLQLVTREAIGHMKEGEEEKTKTYSALIWTNKAI---QKKD 428
E+K++++KI + K+Q DL T + + K+ ++ K T S+ I N+ + Q++
Sbjct: 801 ELKDVERKIAQQAAKLQGIDLDR-TVQQVNQEKQEKQHKLDTVSSKIELNRKLIQDQQEQ 859
Query: 429 IEFL----NDIKDLKIDQKTPLR 447
I+ L N++K K+ T L+
Sbjct: 860 IQHLKSTTNELKSEKLQISTNLQ 882
>gi|225735627 disco-interacting protein 2A isoform f [Homo sapiens]
Length = 798
Score = 30.8 bits (68), Expect = 3.2
Identities = 21/78 (26%), Positives = 33/78 (42%)
Query: 66 PPPKKIRLQELEDSIDNLSQNGEGRISVSHVGSTASKNSNLNVCNVCLGILQEFCEKDFI 125
PPP+K L S + + E ++SV V NVC V L C+ D +
Sbjct: 643 PPPRKAVLSMNGLSYGVIRVDTEEKLSVLTVQDVGQVMPGANVCVVKLEGTPYLCKTDEV 702
Query: 126 KKVCQKVEASGFEFTSLV 143
++C A+G + L+
Sbjct: 703 GEICVSSSATGTAYYGLL 720
>gi|225735625 disco-interacting protein 2A isoform e [Homo sapiens]
Length = 1110
Score = 30.8 bits (68), Expect = 3.2
Identities = 21/78 (26%), Positives = 33/78 (42%)
Query: 66 PPPKKIRLQELEDSIDNLSQNGEGRISVSHVGSTASKNSNLNVCNVCLGILQEFCEKDFI 125
PPP+K L S + + E ++SV V NVC V L C+ D +
Sbjct: 622 PPPRKAVLSMNGLSYGVIRVDTEEKLSVLTVQDVGQVMPGANVCVVKLEGTPYLCKTDEV 681
Query: 126 KKVCQKVEASGFEFTSLV 143
++C A+G + L+
Sbjct: 682 GEICVSSSATGTAYYGLL 699
>gi|45827698 disco-interacting protein 2A isoform d [Homo sapiens]
Length = 812
Score = 30.8 bits (68), Expect = 3.2
Identities = 21/78 (26%), Positives = 33/78 (42%)
Query: 66 PPPKKIRLQELEDSIDNLSQNGEGRISVSHVGSTASKNSNLNVCNVCLGILQEFCEKDFI 125
PPP+K L S + + E ++SV V NVC V L C+ D +
Sbjct: 686 PPPRKAVLSMNGLSYGVIRVDTEEKLSVLTVQDVGQVMPGANVCVVKLEGTPYLCKTDEV 745
Query: 126 KKVCQKVEASGFEFTSLV 143
++C A+G + L+
Sbjct: 746 GEICVSSSATGTAYYGLL 763
>gi|45827696 disco-interacting protein 2A isoform c [Homo sapiens]
Length = 841
Score = 30.8 bits (68), Expect = 3.2
Identities = 21/78 (26%), Positives = 33/78 (42%)
Query: 66 PPPKKIRLQELEDSIDNLSQNGEGRISVSHVGSTASKNSNLNVCNVCLGILQEFCEKDFI 125
PPP+K L S + + E ++SV V NVC V L C+ D +
Sbjct: 686 PPPRKAVLSMNGLSYGVIRVDTEEKLSVLTVQDVGQVMPGANVCVVKLEGTPYLCKTDEV 745
Query: 126 KKVCQKVEASGFEFTSLV 143
++C A+G + L+
Sbjct: 746 GEICVSSSATGTAYYGLL 763
>gi|45827694 disco-interacting protein 2A isoform b [Homo sapiens]
Length = 889
Score = 30.8 bits (68), Expect = 3.2
Identities = 21/78 (26%), Positives = 33/78 (42%)
Query: 66 PPPKKIRLQELEDSIDNLSQNGEGRISVSHVGSTASKNSNLNVCNVCLGILQEFCEKDFI 125
PPP+K L S + + E ++SV V NVC V L C+ D +
Sbjct: 686 PPPRKAVLSMNGLSYGVIRVDTEEKLSVLTVQDVGQVMPGANVCVVKLEGTPYLCKTDEV 745
Query: 126 KKVCQKVEASGFEFTSLV 143
++C A+G + L+
Sbjct: 746 GEICVSSSATGTAYYGLL 763
>gi|32401441 GLI-Kruppel family member HKR1 [Homo sapiens]
Length = 659
Score = 30.8 bits (68), Expect = 3.2
Identities = 15/60 (25%), Positives = 31/60 (51%)
Query: 47 ELQKFLETEKDELILEVMNPPPKKIRLQELEDSIDNLSQNGEGRISVSHVGSTASKNSNL 106
E Q+ ++++D ++++ + P ++ L+E + + L +G G I G K SNL
Sbjct: 201 EEQQPAQSKEDNTVVDIGSSPERRADLEETDKVLHGLEVSGFGEIKYEEFGPGFIKESNL 260
>gi|150010558 myosin, heavy polypeptide 15 [Homo sapiens]
Length = 1946
Score = 30.4 bits (67), Expect = 4.2
Identities = 19/63 (30%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Query: 371 QEIKELQQKINNSSNKIQVRDLQLVTREAIGHMKEGEEEKTKTYSALIWTNKAIQKKDIE 430
+E K LQ++I+N +N+++ L E + K EEEKT+ L T A+++ + +
Sbjct: 1512 RENKNLQEEISNLTNQVREGTKNLTEMEKV--KKLIEEEKTEVQVTLEETEGALERNESK 1569
Query: 431 FLN 433
L+
Sbjct: 1570 ILH 1572
>gi|151101140 coiled-coil domain containing 2 isoform a [Homo
sapiens]
Length = 600
Score = 30.4 bits (67), Expect = 4.2
Identities = 26/117 (22%), Positives = 49/117 (41%), Gaps = 10/117 (8%)
Query: 366 VHFTSQEIKELQQKINNSSNKIQVRDLQLVTREAIGHMKEGEEEKTKTYSALIWTNKAIQ 425
++F S E+++ Q N ++ IQ L L E + E+ K+ + T
Sbjct: 425 LNFKSTEVQKSQSTAQNLTSDIQRLQLDLQKMELLESKMTEEQHSLKSKIKQMTT----- 479
Query: 426 KKDIEFLNDIKDLKIDQKTPLRVLHRRPLAV---RARVIHFMETQYVDEHHFRLHLK 479
D+E ND+ LK + ++ LH+ + + R ME Q ++ + L+
Sbjct: 480 --DLEIYNDLPALKSSGEEKIKKLHQERMILSTHRNAFKKIMEKQNIEYEALKTQLQ 534
>gi|151105223 coiled-coil domain containing 2 isoform a [Homo
sapiens]
Length = 600
Score = 30.4 bits (67), Expect = 4.2
Identities = 26/117 (22%), Positives = 49/117 (41%), Gaps = 10/117 (8%)
Query: 366 VHFTSQEIKELQQKINNSSNKIQVRDLQLVTREAIGHMKEGEEEKTKTYSALIWTNKAIQ 425
++F S E+++ Q N ++ IQ L L E + E+ K+ + T
Sbjct: 425 LNFKSTEVQKSQSTAQNLTSDIQRLQLDLQKMELLESKMTEEQHSLKSKIKQMTT----- 479
Query: 426 KKDIEFLNDIKDLKIDQKTPLRVLHRRPLAV---RARVIHFMETQYVDEHHFRLHLK 479
D+E ND+ LK + ++ LH+ + + R ME Q ++ + L+
Sbjct: 480 --DLEIYNDLPALKSSGEEKIKKLHQERMILSTHRNAFKKIMEKQNIEYEALKTQLQ 534
>gi|151105229 coiled-coil domain containing 2 isoform a [Homo
sapiens]
Length = 600
Score = 30.4 bits (67), Expect = 4.2
Identities = 26/117 (22%), Positives = 49/117 (41%), Gaps = 10/117 (8%)
Query: 366 VHFTSQEIKELQQKINNSSNKIQVRDLQLVTREAIGHMKEGEEEKTKTYSALIWTNKAIQ 425
++F S E+++ Q N ++ IQ L L E + E+ K+ + T
Sbjct: 425 LNFKSTEVQKSQSTAQNLTSDIQRLQLDLQKMELLESKMTEEQHSLKSKIKQMTT----- 479
Query: 426 KKDIEFLNDIKDLKIDQKTPLRVLHRRPLAV---RARVIHFMETQYVDEHHFRLHLK 479
D+E ND+ LK + ++ LH+ + + R ME Q ++ + L+
Sbjct: 480 --DLEIYNDLPALKSSGEEKIKKLHQERMILSTHRNAFKKIMEKQNIEYEALKTQLQ 534
>gi|20336205 transcriptional regulator ATRX isoform 2 [Homo sapiens]
Length = 2454
Score = 30.0 bits (66), Expect = 5.5
Identities = 23/77 (29%), Positives = 35/77 (45%), Gaps = 5/77 (6%)
Query: 55 EKDELILEVMNPPPKKIRLQELEDSIDNLSQNGEG--RISVSHVGSTASKNSNL--NVCN 110
+KD I+E+ + PKK + D +D LS + + V V T K+ +L C
Sbjct: 858 DKDTTIMELRDRLPKKQQASASTDGVDKLSGKEQSFTSLEVRKVAETKEKSKHLKTKTCK 917
Query: 111 VCLGILQEFCEKDFIKK 127
L + EK F+KK
Sbjct: 918 KVQDGLSDIAEK-FLKK 933
>gi|20336209 transcriptional regulator ATRX isoform 1 [Homo sapiens]
Length = 2492
Score = 30.0 bits (66), Expect = 5.5
Identities = 23/77 (29%), Positives = 35/77 (45%), Gaps = 5/77 (6%)
Query: 55 EKDELILEVMNPPPKKIRLQELEDSIDNLSQNGEG--RISVSHVGSTASKNSNL--NVCN 110
+KD I+E+ + PKK + D +D LS + + V V T K+ +L C
Sbjct: 896 DKDTTIMELRDRLPKKQQASASTDGVDKLSGKEQSFTSLEVRKVAETKEKSKHLKTKTCK 955
Query: 111 VCLGILQEFCEKDFIKK 127
L + EK F+KK
Sbjct: 956 KVQDGLSDIAEK-FLKK 971
>gi|195947382 Rab interacting lysosomal protein-like 1 [Homo
sapiens]
Length = 403
Score = 30.0 bits (66), Expect = 5.5
Identities = 16/68 (23%), Positives = 35/68 (51%), Gaps = 6/68 (8%)
Query: 343 EDVDVRTLGNGRPFAIELVNPHRVHFTSQEIKELQQKINNSSNKIQVRDLQLVTREAIGH 402
E V ++ + A++L +P+R FT QE++++ + N +K+ + +E + +
Sbjct: 269 EPVGEESISDAEKVAMDLKDPNRPRFTLQELRDVLHERNELKSKV------FLLQEELAY 322
Query: 403 MKEGEEEK 410
K E E+
Sbjct: 323 YKSEEMEE 330
>gi|157785668 coiled-coil domain containing 39 [Homo sapiens]
Length = 941
Score = 30.0 bits (66), Expect = 5.5
Identities = 20/73 (27%), Positives = 36/73 (49%), Gaps = 10/73 (13%)
Query: 370 SQEIKELQQKINNSSNKIQVRDLQLVTREAIGHMKEGEEEKTKTYSALIWTNKAIQKKDI 429
S E +E KI N+ ++ + ++ EGEEEKT+ Y + A +K+++
Sbjct: 625 STEFRERLSKIEKLKNRYEILTVVMLP-------PEGEEEKTQAYYVI---KAAQEKEEL 674
Query: 430 EFLNDIKDLKIDQ 442
+ D D KI++
Sbjct: 675 QREGDCLDAKINK 687
>gi|27764882 leprecan-like 1 isoform a [Homo sapiens]
Length = 708
Score = 29.6 bits (65), Expect = 7.1
Identities = 21/53 (39%), Positives = 23/53 (43%), Gaps = 1/53 (1%)
Query: 364 HRVHFTSQEIKELQQKINNSSNKIQVRDLQLVTREAIGHMKEGEEEKTKTYSA 416
H + E E+QQ I N V LQLV REA HM E K Y A
Sbjct: 172 HTFFVANPEHMEMQQNIENYRATAGVEALQLVDREAKPHM-ESYNAGVKHYEA 223
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.136 0.403
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,472,522
Number of Sequences: 37866
Number of extensions: 895251
Number of successful extensions: 2551
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 24
Number of HSP's that attempted gapping in prelim test: 2531
Number of HSP's gapped (non-prelim): 49
length of query: 529
length of database: 18,247,518
effective HSP length: 107
effective length of query: 422
effective length of database: 14,195,856
effective search space: 5990651232
effective search space used: 5990651232
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.