TAF1B 12120

Name: TAF1B	Sequence: fasta or formatted (588aa)		NCBI GI: 205360987
Description: TBP-associated factor 1B		Referenced in: RNA Polymerase and General Transcription Factors
Composition: Amino acid Percentage Count Longest homopolymer A alanine 4.1 24 2 C cysteine 2.7 16 1 D aspartate 5.1 30 2 E glutamate 8.3 49 2 F phenylalanine 4.9 29 1 G glycine 3.7 22 1 H histidine 2.6 15 1 I isoleucine 3.4 20 2 K lysine 10.5 62 3 L leucine 10.0 59 2 M methionine 2.0 12 1 N asparagine 3.7 22 2 P proline 3.7 22 2 Q glutamine 4.3 25 2 R arginine 3.7 22 2 S serine 7.7 45 2 T threonine 6.0 35 2 V valine 6.1 36 3 W tryptophan 2.4 14 1 Y tyrosine 4.9 29 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 TBP-associated factor 1B RHOT1 0.007 ras homolog gene family, member T1 isoform 1 RHOT1 0.007 ras homolog gene family, member T1 isoform 2 RHOT1 0.007 ras homolog gene family, member T1 isoform 3 SLC39A12 0.006 solute carrier family 39 (zinc transporter), member... SLC39A12 0.006 solute carrier family 39 (zinc transporter), member... BAZ1B 0.006 bromodomain adjacent to zinc finger domain, 1B [Homo... ASH1L 0.005 absent, small, or homeotic 1-like C6orf103 0.005 hypothetical protein LOC79747 LOC728847 0.005 PREDICTED: hypothetical protein LOC728847 0.005 PREDICTED: hypothetical protein C6orf47 0.004 G4 protein PHF3 0.004 PHD finger protein 3 SFRS12IP1 0.004 P18SRP protein CEP97 0.004 centrosomal protein 97kDa C17orf57 0.004 hypothetical protein LOC124989 OPA1 0.004 optic atrophy 1 isoform 8 OPA1 0.004 optic atrophy 1 isoform 7 OPA1 0.004 optic atrophy 1 isoform 6 OPA1 0.004 optic atrophy 1 isoform 5 OPA1 0.004 optic atrophy 1 isoform 4 OPA1 0.004 optic atrophy 1 isoform 3 OPA1 0.004 optic atrophy 1 isoform 2 OPA1 0.004 optic atrophy 1 isoform 1 EOMES 0.004 eomesodermin MLLT3 0.004 myeloid/lymphoid or mixed-lineage leukemia (trithor... SECISBP2L 0.004 SECIS binding protein 2-like Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.