LOC100288299 18407

Name: LOC100288299	Sequence: fasta or formatted (146aa)		NCBI GI: 239745435
Description: PREDICTED: hypothetical protein XP_002343464		Not currently referenced in the text
Composition: Amino acid Percentage Count Longest homopolymer A alanine 11.0 16 2 C cysteine 2.1 3 1 D aspartate 3.4 5 1 E glutamate 3.4 5 1 F phenylalanine 2.7 4 1 G glycine 9.6 14 2 H histidine 2.7 4 1 I isoleucine 0.0 0 0 K lysine 0.0 0 0 L leucine 10.3 15 2 M methionine 1.4 2 1 N asparagine 2.7 4 1 P proline 9.6 14 2 Q glutamine 10.3 15 3 R arginine 4.8 7 1 S serine 4.1 6 1 T threonine 5.5 8 1 V valine 13.0 19 1 W tryptophan 1.4 2 1 Y tyrosine 2.1 3 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: hypothetical protein XP_002343464 PKD1 0.518 polycystin 1 isoform 2 precursor PKD1 0.518 polycystin 1 isoform 1 precursor SH3GLB2 0.022 SH3-domain GRB2-like endophilin B2 COL18A1 0.018 alpha 1 type XVIII collagen isoform 3 precursor [Ho... EGR2 0.011 early growth response 2 protein isoform b EGR2 0.011 early growth response 2 protein isoform a EGR2 0.011 early growth response 2 protein isoform a EGR2 0.011 early growth response 2 protein isoform a LOC100133479 0.011 PREDICTED: hypothetical protein LOC100133479 0.011 PREDICTED: hypothetical protein LOC255783 0.011 hypothetical protein LOC255783 TAF1 0.011 TBP-associated factor 1 isoform 2 TAF1 0.011 TBP-associated factor 1 isoform 1 LOC100287390 0.007 PREDICTED: hypothetical protein XP_002342820 LOC100287390 0.007 PREDICTED: hypothetical protein PKD1L1 0.007 polycystin-1L1 LOC645390 0.007 PREDICTED: similar to hCG1646661 COL18A1 0.007 alpha 1 type XVIII collagen isoform 2 precursor [Ho... RNF11 0.007 ring finger protein 11 CC2D2A 0.007 coiled-coil and C2 domain containing 2A isoform a [... CC2D2A 0.007 coiled-coil and C2 domain containing 2A isoform b [... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.