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Search of human proteins with 205277334
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|205277334 nitric oxide synthase 1 (neuronal) adaptor protein
isoform 2 [Homo sapiens]
(211 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|205277334 nitric oxide synthase 1 (neuronal) adaptor protein ... 416 e-117
gi|31317301 nitric oxide synthase 1 (neuronal) adaptor protein i... 386 e-108
gi|149588928 SLAIN motif family, member 2 [Homo sapiens] 33 0.18
gi|126116581 retina and anterior neural fold homeobox [Homo sapi... 32 0.39
gi|53831995 splicing factor 3a, subunit 1, 120kDa isoform 2 [Hom... 32 0.51
gi|5032087 splicing factor 3a, subunit 1, 120kDa isoform 1 [Homo... 32 0.51
gi|208022661 hypothetical protein LOC57701 [Homo sapiens] 32 0.51
gi|22212931 nucleolar protein family 6 gamma isoform [Homo sapiens] 32 0.51
gi|18644728 nucleolar protein family 6 alpha isoform [Homo sapiens] 32 0.51
gi|219521893 coiled-coil transcriptional coactivator isoform 2 [... 31 0.67
gi|14149742 coiled-coil transcriptional coactivator isoform 1 [H... 31 0.67
gi|226437606 ankyrin repeat domain 34C [Homo sapiens] 31 0.88
gi|239756364 PREDICTED: ankyrin repeat domain 34C [Homo sapiens] 31 0.88
gi|239750889 PREDICTED: ankyrin repeat domain 34C [Homo sapiens] 31 0.88
gi|239745252 PREDICTED: ankyrin repeat domain 34C [Homo sapiens] 31 0.88
gi|38570149 WWC family member 3 [Homo sapiens] 30 1.5
gi|30795204 histone deacetylase 9 isoform 5 [Homo sapiens] 30 2.0
gi|109633022 mucosal vascular addressin cell adhesion molecule 1... 29 3.3
gi|46909598 a disintegrin and metalloproteinase domain 15 isofor... 29 3.3
gi|145279204 exonuclease 3'-5' domain containing 3 [Homo sapiens] 29 3.3
gi|148229134 ring finger and KH domain containing 2 [Homo sapiens] 29 3.3
gi|154277120 spectrin repeat containing, nuclear envelope 1 isof... 28 4.4
gi|154277118 spectrin repeat containing, nuclear envelope 1 isof... 28 4.4
gi|23097308 spectrin repeat containing, nuclear envelope 1 isofo... 28 4.4
gi|154277116 spectrin repeat containing, nuclear envelope 1 isof... 28 4.4
gi|45439370 TAO kinase 1 [Homo sapiens] 28 4.4
gi|239750588 PREDICTED: hypothetical protein XP_002347440 [Homo ... 28 5.7
gi|239744885 PREDICTED: hypothetical protein XP_002344275 [Homo ... 28 5.7
gi|46909600 a disintegrin and metalloproteinase domain 15 isofor... 28 5.7
gi|149158690 HLA-B associated transcript-2 [Homo sapiens] 28 5.7
>gi|205277334 nitric oxide synthase 1 (neuronal) adaptor protein
isoform 2 [Homo sapiens]
Length = 211
Score = 416 bits (1070), Expect = e-117
Identities = 211/211 (100%), Positives = 211/211 (100%)
Query: 1 MSLSSLCPVFSAAASSLQVHLLKDQLAAEAAARLEAQARVHQLLLQNKDMLQHISLLVKQ 60
MSLSSLCPVFSAAASSLQVHLLKDQLAAEAAARLEAQARVHQLLLQNKDMLQHISLLVKQ
Sbjct: 1 MSLSSLCPVFSAAASSLQVHLLKDQLAAEAAARLEAQARVHQLLLQNKDMLQHISLLVKQ 60
Query: 61 VQELELKLSGQNAMGSQDSLLEITFRSGALPVLCDPTTPKPEDLHSPPLGAGLADFAHPA 120
VQELELKLSGQNAMGSQDSLLEITFRSGALPVLCDPTTPKPEDLHSPPLGAGLADFAHPA
Sbjct: 61 VQELELKLSGQNAMGSQDSLLEITFRSGALPVLCDPTTPKPEDLHSPPLGAGLADFAHPA 120
Query: 121 GSPLGRRDCLVKLECFRFLPPEDTPPPAQGEALLGGLELIKFRESGIASEYESNTDESEE 180
GSPLGRRDCLVKLECFRFLPPEDTPPPAQGEALLGGLELIKFRESGIASEYESNTDESEE
Sbjct: 121 GSPLGRRDCLVKLECFRFLPPEDTPPPAQGEALLGGLELIKFRESGIASEYESNTDESEE 180
Query: 181 RDSWSQEELPRLLNVLQRQELGDGLDDEIAV 211
RDSWSQEELPRLLNVLQRQELGDGLDDEIAV
Sbjct: 181 RDSWSQEELPRLLNVLQRQELGDGLDDEIAV 211
>gi|31317301 nitric oxide synthase 1 (neuronal) adaptor protein
isoform 1 [Homo sapiens]
Length = 506
Score = 386 bits (991), Expect = e-108
Identities = 194/194 (100%), Positives = 194/194 (100%)
Query: 18 QVHLLKDQLAAEAAARLEAQARVHQLLLQNKDMLQHISLLVKQVQELELKLSGQNAMGSQ 77
QVHLLKDQLAAEAAARLEAQARVHQLLLQNKDMLQHISLLVKQVQELELKLSGQNAMGSQ
Sbjct: 313 QVHLLKDQLAAEAAARLEAQARVHQLLLQNKDMLQHISLLVKQVQELELKLSGQNAMGSQ 372
Query: 78 DSLLEITFRSGALPVLCDPTTPKPEDLHSPPLGAGLADFAHPAGSPLGRRDCLVKLECFR 137
DSLLEITFRSGALPVLCDPTTPKPEDLHSPPLGAGLADFAHPAGSPLGRRDCLVKLECFR
Sbjct: 373 DSLLEITFRSGALPVLCDPTTPKPEDLHSPPLGAGLADFAHPAGSPLGRRDCLVKLECFR 432
Query: 138 FLPPEDTPPPAQGEALLGGLELIKFRESGIASEYESNTDESEERDSWSQEELPRLLNVLQ 197
FLPPEDTPPPAQGEALLGGLELIKFRESGIASEYESNTDESEERDSWSQEELPRLLNVLQ
Sbjct: 433 FLPPEDTPPPAQGEALLGGLELIKFRESGIASEYESNTDESEERDSWSQEELPRLLNVLQ 492
Query: 198 RQELGDGLDDEIAV 211
RQELGDGLDDEIAV
Sbjct: 493 RQELGDGLDDEIAV 506
>gi|149588928 SLAIN motif family, member 2 [Homo sapiens]
Length = 581
Score = 33.1 bits (74), Expect = 0.18
Identities = 39/134 (29%), Positives = 49/134 (36%), Gaps = 23/134 (17%)
Query: 58 VKQVQELELKLSGQNAMGSQDSLLEITFRSGALPVL--CDPTTPKPEDLHSPPLGAGLAD 115
V+++QEL KL QN ++ RSGA+ P +P P GA
Sbjct: 14 VRKLQELVKKLEKQNE--------QLRSRSGAVQGAGSLGPGSPVRAGASIPSSGA---- 61
Query: 116 FAHPAGSPLGRRDCLVKLECFRFLPPEDTPPPAQGEALLGGLELIKFRESGIASEYES-N 174
A P G PLG L P P E L L+ E G+ E E
Sbjct: 62 -ASPRGFPLG-------LSAKSGGGPGSGPRRTSSEELRDATSLLAAGEGGLLDEVEPLR 113
Query: 175 TDESEERDSWSQEE 188
DE E W +EE
Sbjct: 114 PDELERLSGWEEEE 127
>gi|126116581 retina and anterior neural fold homeobox [Homo
sapiens]
Length = 346
Score = 32.0 bits (71), Expect = 0.39
Identities = 16/34 (47%), Positives = 18/34 (52%)
Query: 89 ALPVLCDPTTPKPEDLHSPPLGAGLADFAHPAGS 122
+LP P P P L+SPPLG GL A P S
Sbjct: 269 SLPASYTPPPPPPPFLNSPPLGPGLQPLAPPPPS 302
>gi|53831995 splicing factor 3a, subunit 1, 120kDa isoform 2 [Homo
sapiens]
Length = 728
Score = 31.6 bits (70), Expect = 0.51
Identities = 28/84 (33%), Positives = 40/84 (47%), Gaps = 7/84 (8%)
Query: 131 VKLECFRFLPPE--DTPPPAQGEALLGGLELI--KFRESGIASEYESNTDESEERDSWSQ 186
V +E F P E + PPP E L G LI ++ + G + E E + EE D +
Sbjct: 215 VVVETVDFQPNEQGNFPPPTTPEEL-GARILIQERYEKFGESEEVEMEVESDEEDDKQEK 273
Query: 187 EELP--RLLNVLQRQELGDGLDDE 208
E P +L Q Q++ +G DDE
Sbjct: 274 AEEPPSQLDQDTQVQDMDEGSDDE 297
>gi|5032087 splicing factor 3a, subunit 1, 120kDa isoform 1 [Homo
sapiens]
Length = 793
Score = 31.6 bits (70), Expect = 0.51
Identities = 28/84 (33%), Positives = 40/84 (47%), Gaps = 7/84 (8%)
Query: 131 VKLECFRFLPPE--DTPPPAQGEALLGGLELI--KFRESGIASEYESNTDESEERDSWSQ 186
V +E F P E + PPP E L G LI ++ + G + E E + EE D +
Sbjct: 280 VVVETVDFQPNEQGNFPPPTTPEEL-GARILIQERYEKFGESEEVEMEVESDEEDDKQEK 338
Query: 187 EELP--RLLNVLQRQELGDGLDDE 208
E P +L Q Q++ +G DDE
Sbjct: 339 AEEPPSQLDQDTQVQDMDEGSDDE 362
>gi|208022661 hypothetical protein LOC57701 [Homo sapiens]
Length = 1334
Score = 31.6 bits (70), Expect = 0.51
Identities = 36/117 (30%), Positives = 50/117 (42%), Gaps = 7/117 (5%)
Query: 35 EAQARVHQLLLQNKDMLQHISLLVKQVQELELKLSGQNAMGSQDSLLEITFRSGALP-VL 93
E V Q LL KD+ + L K+V +LE QN M S ++ +G+LP +
Sbjct: 64 EVANHVVQALLNQKDLREECIKLKKRVFDLE----RQNQMLSALFQQKLQLTTGSLPQIP 119
Query: 94 CDPTTPKPEDLHSPPLGAGLADFAH-PAGSPLGRRDCLVKLECFRFLP-PEDTPPPA 148
P P E SP L + A P G G+R+ + + P P PPPA
Sbjct: 120 LTPLQPPSEPPASPSLSSTEGPAAPLPLGHCAGQREVCWEQQLRPGGPGPPAAPPPA 176
>gi|22212931 nucleolar protein family 6 gamma isoform [Homo sapiens]
Length = 699
Score = 31.6 bits (70), Expect = 0.51
Identities = 38/113 (33%), Positives = 51/113 (45%), Gaps = 17/113 (15%)
Query: 45 LQNKDMLQHISLLVKQVQEL--ELKLSGQNAMGSQDSLLEITFRSGALPVLCDPTTPKPE 102
L+ ++L H SLL QV+EL E++LS + L E+ R V+ P+ P+ E
Sbjct: 72 LRETEILFHSSLLRLQVEELLKEVRLSEKKKDRIDAFLREVNQR-----VVRVPSVPETE 126
Query: 103 DLHSPPLGAGLADFAHPAGSPLGRRDCLVKLECFRFLPPEDTPPPAQGEALLG 155
L AG+ PL + VK CFRFLPP G LLG
Sbjct: 127 LTDQAWLPAGVR-------VPLHQVPYAVK-GCFRFLPPAQV--TVVGSYLLG 169
>gi|18644728 nucleolar protein family 6 alpha isoform [Homo sapiens]
Length = 1146
Score = 31.6 bits (70), Expect = 0.51
Identities = 38/113 (33%), Positives = 51/113 (45%), Gaps = 17/113 (15%)
Query: 45 LQNKDMLQHISLLVKQVQEL--ELKLSGQNAMGSQDSLLEITFRSGALPVLCDPTTPKPE 102
L+ ++L H SLL QV+EL E++LS + L E+ R V+ P+ P+ E
Sbjct: 72 LRETEILFHSSLLRLQVEELLKEVRLSEKKKDRIDAFLREVNQR-----VVRVPSVPETE 126
Query: 103 DLHSPPLGAGLADFAHPAGSPLGRRDCLVKLECFRFLPPEDTPPPAQGEALLG 155
L AG+ PL + VK CFRFLPP G LLG
Sbjct: 127 LTDQAWLPAGVR-------VPLHQVPYAVK-GCFRFLPPAQV--TVVGSYLLG 169
>gi|219521893 coiled-coil transcriptional coactivator isoform 2
[Homo sapiens]
Length = 606
Score = 31.2 bits (69), Expect = 0.67
Identities = 26/115 (22%), Positives = 50/115 (43%), Gaps = 5/115 (4%)
Query: 14 ASSLQVHLLKDQLAAEAAARLEAQARVHQLLLQNKDMLQHISLLVKQVQELELKLSGQNA 73
+S +Q+ K +L +A Q QL + +++L+++ L +++++ + ++A
Sbjct: 375 SSLVQLSESKRELTELRSALRVLQKEKEQLQEEKQELLEYMRKLEARLEKVADEKWNEDA 434
Query: 74 MGSQDSLLEITFRSGALPVLCDPTTPKPEDLHSPPLGAGLADFAHPAGSPLGRRD 128
+ E L D PED+ PP GL + P SP G R+
Sbjct: 435 TTEDE---EAAVGLSCPAALTDSEDESPEDMRLPPY--GLCERGDPGSSPAGPRE 484
>gi|14149742 coiled-coil transcriptional coactivator isoform 1 [Homo
sapiens]
Length = 691
Score = 31.2 bits (69), Expect = 0.67
Identities = 26/115 (22%), Positives = 50/115 (43%), Gaps = 5/115 (4%)
Query: 14 ASSLQVHLLKDQLAAEAAARLEAQARVHQLLLQNKDMLQHISLLVKQVQELELKLSGQNA 73
+S +Q+ K +L +A Q QL + +++L+++ L +++++ + ++A
Sbjct: 460 SSLVQLSESKRELTELRSALRVLQKEKEQLQEEKQELLEYMRKLEARLEKVADEKWNEDA 519
Query: 74 MGSQDSLLEITFRSGALPVLCDPTTPKPEDLHSPPLGAGLADFAHPAGSPLGRRD 128
+ E L D PED+ PP GL + P SP G R+
Sbjct: 520 TTEDE---EAAVGLSCPAALTDSEDESPEDMRLPPY--GLCERGDPGSSPAGPRE 569
>gi|226437606 ankyrin repeat domain 34C [Homo sapiens]
Length = 535
Score = 30.8 bits (68), Expect = 0.88
Identities = 27/100 (27%), Positives = 48/100 (48%), Gaps = 14/100 (14%)
Query: 33 RLEAQARVHQLLLQNKDMLQHISLLVK-QVQELELKLSGQNAMGSQDSLLEITFRSGALP 91
R A A V+ + +KD L+H+ K + +E+ + + +++ G++ + +
Sbjct: 117 RTGASALVYAINADDKDALKHLLDACKAKGKEVIIITTDKSSSGTKTTKQYLNV------ 170
Query: 92 VLCDPTTPKPEDLHSPPLGAGLADFAHPA---GSPLGRRD 128
P +PK ED HSPPL A +D A SPL ++
Sbjct: 171 ----PPSPKVEDRHSPPLCASPSDIELKALGLDSPLTEKE 206
>gi|239756364 PREDICTED: ankyrin repeat domain 34C [Homo sapiens]
Length = 534
Score = 30.8 bits (68), Expect = 0.88
Identities = 27/100 (27%), Positives = 48/100 (48%), Gaps = 14/100 (14%)
Query: 33 RLEAQARVHQLLLQNKDMLQHISLLVK-QVQELELKLSGQNAMGSQDSLLEITFRSGALP 91
R A A V+ + +KD L+H+ K + +E+ + + +++ G++ + +
Sbjct: 116 RTGASALVYAINADDKDALKHLLDACKAKGKEVIIITTDKSSSGTKTTKQYLNV------ 169
Query: 92 VLCDPTTPKPEDLHSPPLGAGLADFAHPA---GSPLGRRD 128
P +PK ED HSPPL A +D A SPL ++
Sbjct: 170 ----PPSPKVEDRHSPPLCASPSDIELKALGLDSPLTEKE 205
>gi|239750889 PREDICTED: ankyrin repeat domain 34C [Homo sapiens]
Length = 534
Score = 30.8 bits (68), Expect = 0.88
Identities = 27/100 (27%), Positives = 48/100 (48%), Gaps = 14/100 (14%)
Query: 33 RLEAQARVHQLLLQNKDMLQHISLLVK-QVQELELKLSGQNAMGSQDSLLEITFRSGALP 91
R A A V+ + +KD L+H+ K + +E+ + + +++ G++ + +
Sbjct: 116 RTGASALVYAINADDKDALKHLLDACKAKGKEVIIITTDKSSSGTKTTKQYLNV------ 169
Query: 92 VLCDPTTPKPEDLHSPPLGAGLADFAHPA---GSPLGRRD 128
P +PK ED HSPPL A +D A SPL ++
Sbjct: 170 ----PPSPKVEDRHSPPLCASPSDIELKALGLDSPLTEKE 205
>gi|239745252 PREDICTED: ankyrin repeat domain 34C [Homo sapiens]
Length = 535
Score = 30.8 bits (68), Expect = 0.88
Identities = 27/100 (27%), Positives = 48/100 (48%), Gaps = 14/100 (14%)
Query: 33 RLEAQARVHQLLLQNKDMLQHISLLVK-QVQELELKLSGQNAMGSQDSLLEITFRSGALP 91
R A A V+ + +KD L+H+ K + +E+ + + +++ G++ + +
Sbjct: 117 RTGASALVYAINADDKDALKHLLDACKAKGKEVIIITTDKSSSGTKTTKQYLNV------ 170
Query: 92 VLCDPTTPKPEDLHSPPLGAGLADFAHPA---GSPLGRRD 128
P +PK ED HSPPL A +D A SPL ++
Sbjct: 171 ----PPSPKVEDRHSPPLCASPSDIELKALGLDSPLTEKE 206
>gi|38570149 WWC family member 3 [Homo sapiens]
Length = 1092
Score = 30.0 bits (66), Expect = 1.5
Identities = 27/111 (24%), Positives = 46/111 (41%), Gaps = 12/111 (10%)
Query: 25 QLAAEAAARLEAQARVHQLLLQNKDMLQHISLLVKQVQELELKLSGQNAMGSQDSLLEIT 84
Q+ AE A+R + +R+ + L Q K LQ+ V+ +QE++ K+S + D I
Sbjct: 88 QIKAEIASRRDRLSRLKRELTQMKQELQYKEKGVETLQEIDRKMSSTHTSYKLDEAQAIM 147
Query: 85 FRSGAL-PVLCDPTTPKPEDLH-----------SPPLGAGLADFAHPAGSP 123
+ +C + + +H S + L DF H G P
Sbjct: 148 SELRTIKKAICTGEKERRDLMHSLAKLTDSFKNSCSVTDSLVDFPHHVGVP 198
>gi|30795204 histone deacetylase 9 isoform 5 [Homo sapiens]
Length = 1069
Score = 29.6 bits (65), Expect = 2.0
Identities = 29/79 (36%), Positives = 34/79 (43%), Gaps = 7/79 (8%)
Query: 18 QVHLLKDQLAAEAAARLEAQARVHQLLLQNKDMLQHISLLVKQVQEL---ELKLSGQNAM 74
Q + K L AE + E R HQ LQ LQ L +KQ QEL E KL Q
Sbjct: 56 QQQIQKQLLIAEFQKQHENLTRQHQAQLQEHIKLQQELLAIKQQQELLEKEQKLEQQR-- 113
Query: 75 GSQDSLLEITFRSGALPVL 93
Q+ +E R LP L
Sbjct: 114 --QEQEVERHRREQQLPPL 130
>gi|109633022 mucosal vascular addressin cell adhesion molecule 1
isoform a precursor [Homo sapiens]
Length = 382
Score = 28.9 bits (63), Expect = 3.3
Identities = 14/27 (51%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
Query: 81 LEITFRSGALPVLCDPTTPKPEDLHSP 107
LE++ R A+PVL PT+P+P D SP
Sbjct: 213 LELSHRQ-AIPVLHSPTSPEPPDTTSP 238
>gi|46909598 a disintegrin and metalloproteinase domain 15 isoform 5
preproprotein [Homo sapiens]
Length = 862
Score = 28.9 bits (63), Expect = 3.3
Identities = 37/122 (30%), Positives = 48/122 (39%), Gaps = 12/122 (9%)
Query: 7 CPVFSAAASSLQVHLLKDQLAAEAAARLEA----QARVHQLLLQNKDMLQHISLLVKQVQ 62
C A SSL LL L L A +AR+HQ L Q L+ + + Q
Sbjct: 684 CTTQLKATSSLTTGLLLSLLVLLVLVMLGASYWYRARLHQRLCQ----LKGPTCQYRAAQ 739
Query: 63 ELELKLSGQNAMGSQDSLLEITFRSGALPVLCDPTTPKPEDLHSPPLGAGLADFAHPAGS 122
+ G Q +LL ++ AL P+ P P D S L A LAD +P
Sbjct: 740 SGPSERPGP----PQRALLARGTKASALSFPAPPSRPLPPDPVSKRLQAELADRPNPPTR 795
Query: 123 PL 124
PL
Sbjct: 796 PL 797
>gi|145279204 exonuclease 3'-5' domain containing 3 [Homo sapiens]
Length = 876
Score = 28.9 bits (63), Expect = 3.3
Identities = 24/86 (27%), Positives = 38/86 (44%), Gaps = 11/86 (12%)
Query: 106 SPPLGAGLADFAHPAGSPLGRRDCLVKLECFRFLPPEDTPPPAQGEALLGGLELIKFRES 165
SP L L+ P+ C ++L L PE+ P A +EL +FR
Sbjct: 296 SPWLQEQLSQLLVSHSDPVTAAQCAMEL-----LLPEERLPAAVA------VELRRFRLQ 344
Query: 166 GIASEYESNTDESEERDSWSQEELPR 191
G A+E +S + + +D + Q +PR
Sbjct: 345 GRATEADSRLEVKDMKDRYYQLPIPR 370
>gi|148229134 ring finger and KH domain containing 2 [Homo sapiens]
Length = 659
Score = 28.9 bits (63), Expect = 3.3
Identities = 26/95 (27%), Positives = 38/95 (40%), Gaps = 12/95 (12%)
Query: 99 PKPEDLHSPPLGAGLADFAHPAGSPLGRRDCLVKLECFRFLPPEDTPPPAQGEALLGGLE 158
P P + +P L A PA + G+ +L P E PP G LE
Sbjct: 60 PSPAEPGAPALRA-------PAAAAQGQARRAAELS-----PEERAPPGRPGAPEAAELE 107
Query: 159 LIKFRESGIASEYESNTDESEERDSWSQEELPRLL 193
L + E G +E + + E EE + +E+ LL
Sbjct: 108 LEEDEEEGEEAELDGDLLEEEELEEAEEEDRSSLL 142
>gi|154277120 spectrin repeat containing, nuclear envelope 1 isoform
3 [Homo sapiens]
Length = 982
Score = 28.5 bits (62), Expect = 4.4
Identities = 26/90 (28%), Positives = 46/90 (51%), Gaps = 6/90 (6%)
Query: 15 SSLQVHLLKDQ-----LAAEAAARLEAQARVHQLLLQNKDMLQHISLLVKQVQELELKLS 69
S L+V L+D + AE LEA+ +VH + + K +L+ +S +K++++L S
Sbjct: 790 SQLRVASLQDMSCQLLVNAEGTDCLEAKEKVHVIGNRLKLLLKEVSRHIKELEKLLDVSS 849
Query: 70 GQNAMGSQDSLLEITFRSGALPVLCDPTTP 99
Q + S S E+ SG++ +TP
Sbjct: 850 SQQDLSSWSSADELD-TSGSVSPTSGRSTP 878
>gi|154277118 spectrin repeat containing, nuclear envelope 1 isoform 4
[Homo sapiens]
Length = 3321
Score = 28.5 bits (62), Expect = 4.4
Identities = 26/90 (28%), Positives = 46/90 (51%), Gaps = 6/90 (6%)
Query: 15 SSLQVHLLKDQ-----LAAEAAARLEAQARVHQLLLQNKDMLQHISLLVKQVQELELKLS 69
S L+V L+D + AE LEA+ +VH + + K +L+ +S +K++++L S
Sbjct: 3129 SQLRVASLQDMSCQLLVNAEGTDCLEAKEKVHVIGNRLKLLLKEVSRHIKELEKLLDVSS 3188
Query: 70 GQNAMGSQDSLLEITFRSGALPVLCDPTTP 99
Q + S S E+ SG++ +TP
Sbjct: 3189 SQQDLSSWSSADELD-TSGSVSPTSGRSTP 3217
>gi|23097308 spectrin repeat containing, nuclear envelope 1 isoform 2
[Homo sapiens]
Length = 8749
Score = 28.5 bits (62), Expect = 4.4
Identities = 26/90 (28%), Positives = 46/90 (51%), Gaps = 6/90 (6%)
Query: 15 SSLQVHLLKDQ-----LAAEAAARLEAQARVHQLLLQNKDMLQHISLLVKQVQELELKLS 69
S L+V L+D + AE LEA+ +VH + + K +L+ +S +K++++L S
Sbjct: 8557 SQLRVASLQDMSCQLLVNAEGTDCLEAKEKVHVIGNRLKLLLKEVSRHIKELEKLLDVSS 8616
Query: 70 GQNAMGSQDSLLEITFRSGALPVLCDPTTP 99
Q + S S E+ SG++ +TP
Sbjct: 8617 SQQDLSSWSSADELD-TSGSVSPTSGRSTP 8645
>gi|154277116 spectrin repeat containing, nuclear envelope 1 isoform 1
[Homo sapiens]
Length = 8797
Score = 28.5 bits (62), Expect = 4.4
Identities = 26/90 (28%), Positives = 46/90 (51%), Gaps = 6/90 (6%)
Query: 15 SSLQVHLLKDQ-----LAAEAAARLEAQARVHQLLLQNKDMLQHISLLVKQVQELELKLS 69
S L+V L+D + AE LEA+ +VH + + K +L+ +S +K++++L S
Sbjct: 8605 SQLRVASLQDMSCQLLVNAEGTDCLEAKEKVHVIGNRLKLLLKEVSRHIKELEKLLDVSS 8664
Query: 70 GQNAMGSQDSLLEITFRSGALPVLCDPTTP 99
Q + S S E+ SG++ +TP
Sbjct: 8665 SQQDLSSWSSADELD-TSGSVSPTSGRSTP 8693
>gi|45439370 TAO kinase 1 [Homo sapiens]
Length = 1001
Score = 28.5 bits (62), Expect = 4.4
Identities = 26/100 (26%), Positives = 39/100 (39%), Gaps = 5/100 (5%)
Query: 24 DQLAAEAAARLEAQARVHQLLLQNKDMLQHISLLVKQVQELELKLSGQNAMGSQDSLLEI 83
+Q + A LE + L LQN+ + SLL +Q +E+E S +G + +L
Sbjct: 835 EQRVSLRRALLEQKIEEEMLALQNERTERIRSLLERQAREIEAFDSESMRLGFSNMVL-- 892
Query: 84 TFRSGALPVLCDPTTPKPEDLHSPPLGAGLADFAHPAGSP 123
S P + P P G + HP G P
Sbjct: 893 ---SNLSPEAFSHSYPGASGWSHNPTGGPGPHWGHPMGGP 929
>gi|239750588 PREDICTED: hypothetical protein XP_002347440 [Homo
sapiens]
Length = 510
Score = 28.1 bits (61), Expect = 5.7
Identities = 13/30 (43%), Positives = 16/30 (53%)
Query: 93 LCDPTTPKPEDLHSPPLGAGLADFAHPAGS 122
+C P P SPP G GL+ A P+GS
Sbjct: 333 VCFPQGPAQNMPVSPPPGTGLSSLARPSGS 362
>gi|239744885 PREDICTED: hypothetical protein XP_002344275 [Homo
sapiens]
Length = 510
Score = 28.1 bits (61), Expect = 5.7
Identities = 13/30 (43%), Positives = 16/30 (53%)
Query: 93 LCDPTTPKPEDLHSPPLGAGLADFAHPAGS 122
+C P P SPP G GL+ A P+GS
Sbjct: 333 VCFPQGPAQNMPVSPPPGTGLSSLARPSGS 362
>gi|46909600 a disintegrin and metalloproteinase domain 15 isoform 6
preproprotein [Homo sapiens]
Length = 863
Score = 28.1 bits (61), Expect = 5.7
Identities = 36/122 (29%), Positives = 46/122 (37%), Gaps = 11/122 (9%)
Query: 7 CPVFSAAASSLQVHLLKDQLAAEAAARLEA----QARVHQLLLQNKDMLQHISLLVKQVQ 62
C A SSL LL L L A +AR+HQ L Q K Q +
Sbjct: 684 CTTQLKATSSLTTGLLLSLLVLLVLVMLGASYWYRARLHQRLCQLKGP-------TCQYR 736
Query: 63 ELELKLSGQNAMGSQDSLLEITFRSGALPVLCDPTTPKPEDLHSPPLGAGLADFAHPAGS 122
+ S + + L T ++ AL P+ P P D S L A LAD +P
Sbjct: 737 AAQSGPSERPGPPQRALLARGTKQASALSFPAPPSRPLPPDPVSKRLQAELADRPNPPTR 796
Query: 123 PL 124
PL
Sbjct: 797 PL 798
>gi|149158690 HLA-B associated transcript-2 [Homo sapiens]
Length = 2157
Score = 28.1 bits (61), Expect = 5.7
Identities = 20/55 (36%), Positives = 25/55 (45%), Gaps = 7/55 (12%)
Query: 99 PKPEDLHSPPLGAGLADFAHPAGSP-----LGRRDCLVKLECFRFLPPEDTPPPA 148
P P D +S PL G P+G+P L D + + F LPP PPPA
Sbjct: 1951 PSPSDFYSTPLQPGGQSGFLPSGAPAQQMLLPMVDSQLPVVNFGSLPP--APPPA 2003
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.315 0.133 0.379
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,065,088
Number of Sequences: 37866
Number of extensions: 486583
Number of successful extensions: 1531
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 27
Number of HSP's that attempted gapping in prelim test: 1508
Number of HSP's gapped (non-prelim): 52
length of query: 211
length of database: 18,247,518
effective HSP length: 98
effective length of query: 113
effective length of database: 14,536,650
effective search space: 1642641450
effective search space used: 1642641450
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.