Search of human proteins with 113425821

Search of human proteins with 113425821

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|113425821 PREDICTED: hypothetical protein [Homo sapiens]
         (162 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|113425821 PREDICTED: hypothetical protein [Homo sapiens]           318   1e-87
gi|113425445 PREDICTED: hypothetical protein [Homo sapiens]           318   1e-87
gi|169209173 PREDICTED: hypothetical protein [Homo sapiens]           286   7e-78
gi|124494251 BCL2-associated athanogene isoform 1L [Homo sapiens]      39   0.002
gi|145275193 specifically androgen-regulated protein isoform 2 [...    35   0.028
gi|145275189 specifically androgen-regulated protein isoform 1 [...    35   0.028
gi|156071470 hyperpolarization activated cyclic nucleotide-gated...    34   0.048
gi|197276661 paired box 1 [Homo sapiens]                               34   0.048
gi|116805334 Ras-induced senescence 1 [Homo sapiens]                   34   0.063
gi|239752280 PREDICTED: similar to family with sequence similari...    33   0.082
gi|210032463 family with sequence similarity 48, member B2 [Homo...    33   0.082
gi|148613882 homeobox A4 [Homo sapiens]                                33   0.11 
gi|169172132 PREDICTED: similar to forkhead box L2 [Homo sapiens]      33   0.11 
gi|239743053 PREDICTED: hypothetical protein XP_002342748 [Homo ...    33   0.11 
gi|113419423 PREDICTED: similar to forkhead box L2 [Homo sapiens]      33   0.11 
gi|62422554 p21-activated kinase 4 isoform 1 [Homo sapiens]            33   0.11 
gi|62422557 p21-activated kinase 4 isoform 1 [Homo sapiens]            33   0.11 
gi|5031975 p21-activated kinase 4 isoform 1 [Homo sapiens]             33   0.11 
gi|239757467 PREDICTED: hypothetical protein [Homo sapiens]            33   0.14 
gi|239751993 PREDICTED: hypothetical protein [Homo sapiens]            33   0.14 
gi|239746476 PREDICTED: hypothetical protein [Homo sapiens]            33   0.14 
gi|12707580 paired-like homeobox 2b [Homo sapiens]                     33   0.14 
gi|157364934 fibrosin [Homo sapiens]                                   33   0.14 
gi|155722994 zinc finger CCCH-type containing 3 [Homo sapiens]         33   0.14 
gi|158534059 formin binding protein 4 [Homo sapiens]                   32   0.18 
gi|239756937 PREDICTED: hypothetical protein [Homo sapiens]            32   0.24 
gi|239751449 PREDICTED: hypothetical protein XP_002347867 [Homo ...    32   0.24 
gi|239745954 PREDICTED: hypothetical protein XP_002343623 [Homo ...    32   0.24 
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]        32   0.24 
gi|110611914 progesterone receptor [Homo sapiens]                      32   0.31 

>gi|113425821 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 162

 Score =  318 bits (815), Expect = 1e-87
 Identities = 162/162 (100%), Positives = 162/162 (100%)

Query: 1   MAFTFFVVVVDMAEEDGKLIFKIQTFQAPSFCAGISLSALGTERRARARLSLGGPRGSDP 60
           MAFTFFVVVVDMAEEDGKLIFKIQTFQAPSFCAGISLSALGTERRARARLSLGGPRGSDP
Sbjct: 1   MAFTFFVVVVDMAEEDGKLIFKIQTFQAPSFCAGISLSALGTERRARARLSLGGPRGSDP 60

Query: 61  GRQTGHPSSALLPRSAAAAAANPAAGGAAPARQPAASLRSLRRASRASGALVSHCVLQGQ 120
           GRQTGHPSSALLPRSAAAAAANPAAGGAAPARQPAASLRSLRRASRASGALVSHCVLQGQ
Sbjct: 61  GRQTGHPSSALLPRSAAAAAANPAAGGAAPARQPAASLRSLRRASRASGALVSHCVLQGQ 120

Query: 121 NGTVDDGRTSPCSETSLNKNKNQTTTLQGKEFRVNKQSFSGK 162
           NGTVDDGRTSPCSETSLNKNKNQTTTLQGKEFRVNKQSFSGK
Sbjct: 121 NGTVDDGRTSPCSETSLNKNKNQTTTLQGKEFRVNKQSFSGK 162


>gi|113425445 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 162

 Score =  318 bits (815), Expect = 1e-87
 Identities = 162/162 (100%), Positives = 162/162 (100%)

Query: 1   MAFTFFVVVVDMAEEDGKLIFKIQTFQAPSFCAGISLSALGTERRARARLSLGGPRGSDP 60
           MAFTFFVVVVDMAEEDGKLIFKIQTFQAPSFCAGISLSALGTERRARARLSLGGPRGSDP
Sbjct: 1   MAFTFFVVVVDMAEEDGKLIFKIQTFQAPSFCAGISLSALGTERRARARLSLGGPRGSDP 60

Query: 61  GRQTGHPSSALLPRSAAAAAANPAAGGAAPARQPAASLRSLRRASRASGALVSHCVLQGQ 120
           GRQTGHPSSALLPRSAAAAAANPAAGGAAPARQPAASLRSLRRASRASGALVSHCVLQGQ
Sbjct: 61  GRQTGHPSSALLPRSAAAAAANPAAGGAAPARQPAASLRSLRRASRASGALVSHCVLQGQ 120

Query: 121 NGTVDDGRTSPCSETSLNKNKNQTTTLQGKEFRVNKQSFSGK 162
           NGTVDDGRTSPCSETSLNKNKNQTTTLQGKEFRVNKQSFSGK
Sbjct: 121 NGTVDDGRTSPCSETSLNKNKNQTTTLQGKEFRVNKQSFSGK 162


>gi|169209173 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 193

 Score =  286 bits (731), Expect = 7e-78
 Identities = 147/156 (94%), Positives = 149/156 (95%)

Query: 7   VVVVDMAEEDGKLIFKIQTFQAPSFCAGISLSALGTERRARARLSLGGPRGSDPGRQTGH 66
           V+ V +     KLIFKIQTFQAPSFCAGISLSALGTERRARARLSLGGPRGSDPGRQTGH
Sbjct: 38  VIKVSVKSAYLKLIFKIQTFQAPSFCAGISLSALGTERRARARLSLGGPRGSDPGRQTGH 97

Query: 67  PSSALLPRSAAAAAANPAAGGAAPARQPAASLRSLRRASRASGALVSHCVLQGQNGTVDD 126
           PSSALLPRSAAAAAANPAAGGAAPARQPAASLRSLRRASRASGALVSHCVLQGQNGTVDD
Sbjct: 98  PSSALLPRSAAAAAANPAAGGAAPARQPAASLRSLRRASRASGALVSHCVLQGQNGTVDD 157

Query: 127 GRTSPCSETSLNKNKNQTTTLQGKEFRVNKQSFSGK 162
           GRTSPCSETSLNKNKNQTTTLQGKEFRVNKQSFSGK
Sbjct: 158 GRTSPCSETSLNKNKNQTTTLQGKEFRVNKQSFSGK 193


>gi|124494251 BCL2-associated athanogene isoform 1L [Homo sapiens]
          Length = 345

 Score = 38.9 bits (89), Expect = 0.002
 Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 2/94 (2%)

Query: 55  PRGSDPGRQTGHPSSALLP-RSAAAAAANPAAGGAAPARQPAASLRSLRRASRASGALVS 113
           PR S+P  Q G P S   P RS A+    P  G AA AR+P    ++ RR++R+     S
Sbjct: 30  PRQSEPPAQRGPPPSGRPPARSTASGHDRPTRGAAAGARRPRMKKKTRRRSTRSEELTRS 89

Query: 114 HCVLQGQNGTVDDGRTSPCSETSLNK-NKNQTTT 146
             +   +  T  +  T     T   + N++Q  T
Sbjct: 90  EELTLSEEATWSEEATQSEEATQGEEMNRSQEVT 123


>gi|145275193 specifically androgen-regulated protein isoform 2
           [Homo sapiens]
          Length = 355

 Score = 35.0 bits (79), Expect = 0.028
 Identities = 26/78 (33%), Positives = 41/78 (52%), Gaps = 4/78 (5%)

Query: 33  AGISLSALGTERRAR--ARLSLGGPRGSD-PGRQTGHPSSALLPRSAAAAAANPAAGGAA 89
           +G+   +L  +R+AR  A   LG P+  D PG     P+S++ P+   A   +PA G A 
Sbjct: 87  SGLISCSLQEQRKARKEALEKLGLPQDQDEPGLHLSKPTSSIRPKETRAQHLSPAPGLAQ 146

Query: 90  PARQPAASLRSLRRASRA 107
           PA  PA +  ++  A +A
Sbjct: 147 PA-APAQASAAIPAAGKA 163


>gi|145275189 specifically androgen-regulated protein isoform 1
           [Homo sapiens]
          Length = 601

 Score = 35.0 bits (79), Expect = 0.028
 Identities = 26/78 (33%), Positives = 41/78 (52%), Gaps = 4/78 (5%)

Query: 33  AGISLSALGTERRAR--ARLSLGGPRGSD-PGRQTGHPSSALLPRSAAAAAANPAAGGAA 89
           +G+   +L  +R+AR  A   LG P+  D PG     P+S++ P+   A   +PA G A 
Sbjct: 333 SGLISCSLQEQRKARKEALEKLGLPQDQDEPGLHLSKPTSSIRPKETRAQHLSPAPGLAQ 392

Query: 90  PARQPAASLRSLRRASRA 107
           PA  PA +  ++  A +A
Sbjct: 393 PA-APAQASAAIPAAGKA 409


>gi|156071470 hyperpolarization activated cyclic nucleotide-gated
           potassium channel 2 [Homo sapiens]
          Length = 889

 Score = 34.3 bits (77), Expect = 0.048
 Identities = 31/96 (32%), Positives = 37/96 (38%), Gaps = 5/96 (5%)

Query: 20  IFKIQTFQAPSFCAGISLSALGTERRARARLSLGGPRGSDPGRQTGHPSSALLPRSAAAA 79
           I  +Q   A SFC  ++   +G       RL    P G  P   +  P     P  A A+
Sbjct: 727 IATLQQAAAMSFCPQVARPLVGPLALGSPRLVRRPPPGPAPAAASPGPPPPASPPGAPAS 786

Query: 80  AANPAA---GG--AAPARQPAASLRSLRRASRASGA 110
              P     GG  AAP   PA   R L RASR   A
Sbjct: 787 PRAPRTSPYGGLPAAPLAGPALPARRLSRASRPLSA 822


>gi|197276661 paired box 1 [Homo sapiens]
          Length = 534

 Score = 34.3 bits (77), Expect = 0.048
 Identities = 25/49 (51%), Positives = 29/49 (59%), Gaps = 3/49 (6%)

Query: 76  AAAAAANPAAGGAA--PARQPAASLRSLRRASRASGALVSHCVLQGQNG 122
           AAAAAA P AGG+A     Q  +S R  RR SR SGAL   C+ +G  G
Sbjct: 19  AAAAAAGPGAGGSALRCRAQRVSSPRLGRRGSRLSGAL-PLCLSRGGGG 66


>gi|116805334 Ras-induced senescence 1 [Homo sapiens]
          Length = 300

 Score = 33.9 bits (76), Expect = 0.063
 Identities = 24/70 (34%), Positives = 32/70 (45%), Gaps = 4/70 (5%)

Query: 29  PSFCAGISLSALGTERRARARLSLGGPRGSDPGRQTGHPSSALLPRSAAAAAANPAAGGA 88
           P     + L+A G ++  R  +  G  RG    R+TG    A  P +AAA A  P A  A
Sbjct: 123 PLLIEHLGLAAGGAQQDLRLCVGCGWVRG----RRTGRLRPAAAPSAAAATAGAPTALPA 178

Query: 89  APARQPAASL 98
            PA +P   L
Sbjct: 179 YPAAEPPGPL 188


>gi|239752280 PREDICTED: similar to family with sequence similarity
           48, member B2 [Homo sapiens]
          Length = 779

 Score = 33.5 bits (75), Expect = 0.082
 Identities = 22/57 (38%), Positives = 28/57 (49%), Gaps = 2/57 (3%)

Query: 58  SDPGRQTGHPSSALLPRSAAAAAANPAAGGAAPARQPAASLRSLRRASRASGALVSH 114
           S P +Q G P     P +A A AA   A   APA  PA +  ++  A+ A GA  SH
Sbjct: 441 SFPPQQAGSPLKRPFPAAAPAVAAAAPAPAPAPAAAPALAAAAV--AAAAGGAAPSH 495



 Score = 29.3 bits (64), Expect = 1.6
 Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 1/44 (2%)

Query: 67  PSSALLPRSAAAAAANPAAGGAAPARQPAASLRSLRRASRASGA 110
           P+ A  P  AAAA A  AAGGAAP+     S+  ++ + R   A
Sbjct: 471 PAPAAAPALAAAAVA-AAAGGAAPSHSQKPSVPLIKASRRRPAA 513


>gi|210032463 family with sequence similarity 48, member B2 [Homo
           sapiens]
          Length = 817

 Score = 33.5 bits (75), Expect = 0.082
 Identities = 22/57 (38%), Positives = 28/57 (49%), Gaps = 2/57 (3%)

Query: 58  SDPGRQTGHPSSALLPRSAAAAAANPAAGGAAPARQPAASLRSLRRASRASGALVSH 114
           S P +Q G P     P +A A AA   A   APA  PA +  ++  A+ A GA  SH
Sbjct: 479 SFPPQQAGSPLKRPFPAAAPAVAAAAPAPAPAPAAAPALAAAAV--AAAAGGAAPSH 533



 Score = 29.3 bits (64), Expect = 1.6
 Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 1/44 (2%)

Query: 67  PSSALLPRSAAAAAANPAAGGAAPARQPAASLRSLRRASRASGA 110
           P+ A  P  AAAA A  AAGGAAP+     S+  ++ + R   A
Sbjct: 509 PAPAAAPALAAAAVA-AAAGGAAPSHSQKPSVPLIKASRRRPAA 551


>gi|148613882 homeobox A4 [Homo sapiens]
          Length = 320

 Score = 33.1 bits (74), Expect = 0.11
 Identities = 23/61 (37%), Positives = 29/61 (47%), Gaps = 3/61 (4%)

Query: 62  RQTGHPSSALLPRSAAAAAANPAA--GGAAPARQPAASLRSLRRASRASGALVSHCVLQG 119
           R+  +P++AL P   AA  A P    GGA+P R P       +    A G   SH VLQ 
Sbjct: 80  REPAYPAAALYPAHGAADTAYPYGYRGGASPGRPPQPEQPPAQAKGPAHGLHASH-VLQP 138

Query: 120 Q 120
           Q
Sbjct: 139 Q 139


>gi|169172132 PREDICTED: similar to forkhead box L2 [Homo sapiens]
          Length = 528

 Score = 33.1 bits (74), Expect = 0.11
 Identities = 22/54 (40%), Positives = 25/54 (46%), Gaps = 1/54 (1%)

Query: 44  RRARARLSLGGPRGSDPGRQTGHPSSALLPRSAAAAAANPAAGGAAPARQPAAS 97
           RR R      GPRG   G   G PS    P +A    A  +AG  AP R+P AS
Sbjct: 423 RRRRRGPKREGPRGPRAGGAQG-PSGPSEPPAAQGRLAPDSAGEGAPGREPPAS 475


>gi|239743053 PREDICTED: hypothetical protein XP_002342748 [Homo
           sapiens]
          Length = 591

 Score = 33.1 bits (74), Expect = 0.11
 Identities = 22/54 (40%), Positives = 25/54 (46%), Gaps = 1/54 (1%)

Query: 44  RRARARLSLGGPRGSDPGRQTGHPSSALLPRSAAAAAANPAAGGAAPARQPAAS 97
           RR R      GPRG   G   G PS    P +A    A  +AG  AP R+P AS
Sbjct: 486 RRRRRGPKREGPRGPRAGGAQG-PSGPSEPPAAQGRLAPDSAGEGAPGREPPAS 538


>gi|113419423 PREDICTED: similar to forkhead box L2 [Homo sapiens]
          Length = 387

 Score = 33.1 bits (74), Expect = 0.11
 Identities = 22/54 (40%), Positives = 25/54 (46%), Gaps = 1/54 (1%)

Query: 44  RRARARLSLGGPRGSDPGRQTGHPSSALLPRSAAAAAANPAAGGAAPARQPAAS 97
           RR R      GPRG   G   G PS    P +A    A  +AG  AP R+P AS
Sbjct: 190 RRRRRGPKREGPRGPRAGGAQG-PSGPSEPPAAQGRLAPDSAGEGAPGREPPAS 242


>gi|62422554 p21-activated kinase 4 isoform 1 [Homo sapiens]
          Length = 591

 Score = 33.1 bits (74), Expect = 0.11
 Identities = 23/63 (36%), Positives = 29/63 (46%), Gaps = 3/63 (4%)

Query: 48  ARLSLGGPRGSDPGRQTGHPSSALLPRSAAAAAANPAAGGAAPARQPAASLRSLRRASRA 107
           A+L+ G P  + P   T HPS          A   P+AGG A    P +S  S R  +RA
Sbjct: 197 AKLAAGRPFNTYPRADTDHPSRGAQGEPHDVAPNGPSAGGLA---IPQSSSSSSRPPTRA 253

Query: 108 SGA 110
            GA
Sbjct: 254 RGA 256


>gi|62422557 p21-activated kinase 4 isoform 1 [Homo sapiens]
          Length = 591

 Score = 33.1 bits (74), Expect = 0.11
 Identities = 23/63 (36%), Positives = 29/63 (46%), Gaps = 3/63 (4%)

Query: 48  ARLSLGGPRGSDPGRQTGHPSSALLPRSAAAAAANPAAGGAAPARQPAASLRSLRRASRA 107
           A+L+ G P  + P   T HPS          A   P+AGG A    P +S  S R  +RA
Sbjct: 197 AKLAAGRPFNTYPRADTDHPSRGAQGEPHDVAPNGPSAGGLA---IPQSSSSSSRPPTRA 253

Query: 108 SGA 110
            GA
Sbjct: 254 RGA 256


>gi|5031975 p21-activated kinase 4 isoform 1 [Homo sapiens]
          Length = 591

 Score = 33.1 bits (74), Expect = 0.11
 Identities = 23/63 (36%), Positives = 29/63 (46%), Gaps = 3/63 (4%)

Query: 48  ARLSLGGPRGSDPGRQTGHPSSALLPRSAAAAAANPAAGGAAPARQPAASLRSLRRASRA 107
           A+L+ G P  + P   T HPS          A   P+AGG A    P +S  S R  +RA
Sbjct: 197 AKLAAGRPFNTYPRADTDHPSRGAQGEPHDVAPNGPSAGGLA---IPQSSSSSSRPPTRA 253

Query: 108 SGA 110
            GA
Sbjct: 254 RGA 256


>gi|239757467 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 278

 Score = 32.7 bits (73), Expect = 0.14
 Identities = 31/87 (35%), Positives = 38/87 (43%), Gaps = 14/87 (16%)

Query: 29  PSFCAGISLSALGTERRARARLSLGGPRGSDPGRQTGHPSSALLPRS------AAAAAAN 82
           PS CAG  L ALG + R     ++  PR    GR     S+A   RS       A A  +
Sbjct: 34  PSPCAGRGLEALGRDWRG----TVAEPRPEAQGRVPSFRSNARRVRSVRGGGVTAPAPPD 89

Query: 83  PAAGGAAP----ARQPAASLRSLRRAS 105
              G   P    AR  AA+ RSLR+ S
Sbjct: 90  AEVGSGRPAGLAARAAAAAPRSLRKPS 116


>gi|239751993 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 278

 Score = 32.7 bits (73), Expect = 0.14
 Identities = 31/87 (35%), Positives = 38/87 (43%), Gaps = 14/87 (16%)

Query: 29  PSFCAGISLSALGTERRARARLSLGGPRGSDPGRQTGHPSSALLPRS------AAAAAAN 82
           PS CAG  L ALG + R     ++  PR    GR     S+A   RS       A A  +
Sbjct: 34  PSPCAGRGLEALGRDWRG----TVAEPRPEAQGRVPSFRSNARRVRSVRGGGVTAPAPPD 89

Query: 83  PAAGGAAP----ARQPAASLRSLRRAS 105
              G   P    AR  AA+ RSLR+ S
Sbjct: 90  AEVGSGRPAGLAARAAAAAPRSLRKPS 116


>gi|239746476 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 278

 Score = 32.7 bits (73), Expect = 0.14
 Identities = 31/87 (35%), Positives = 38/87 (43%), Gaps = 14/87 (16%)

Query: 29  PSFCAGISLSALGTERRARARLSLGGPRGSDPGRQTGHPSSALLPRS------AAAAAAN 82
           PS CAG  L ALG + R     ++  PR    GR     S+A   RS       A A  +
Sbjct: 34  PSPCAGRGLEALGRDWRG----TVAEPRPEAQGRVPSFRSNARRVRSVRGGGVTAPAPPD 89

Query: 83  PAAGGAAP----ARQPAASLRSLRRAS 105
              G   P    AR  AA+ RSLR+ S
Sbjct: 90  AEVGSGRPAGLAARAAAAAPRSLRKPS 116


>gi|12707580 paired-like homeobox 2b [Homo sapiens]
          Length = 314

 Score = 32.7 bits (73), Expect = 0.14
 Identities = 30/82 (36%), Positives = 38/82 (46%), Gaps = 24/82 (29%)

Query: 53  GGPRGSDPGRQTGHPSSALLPRSAAAAAANPAAGGAAPARQP------------------ 94
           GGP G +PG+  G  ++A    +AAAAAA  AAGG A A  P                  
Sbjct: 230 GGP-GGEPGKG-GAAAAAAAAAAAAAAAAAAAAGGLAAAGGPGQGWAPGPGPITSIPDSL 287

Query: 95  ----AASLRSLRRASRASGALV 112
               A+ L SL+R + A  ALV
Sbjct: 288 GGPFASVLSSLQRPNGAKAALV 309



 Score = 30.8 bits (68), Expect = 0.53
 Identities = 19/45 (42%), Positives = 22/45 (48%)

Query: 53  GGPRGSDPGRQTGHPSSALLPRSAAAAAANPAAGGAAPARQPAAS 97
           G P  + PG   G P       +AAAAAA  AA  AA A   AA+
Sbjct: 222 GAPGAAGPGGPGGEPGKGGAAAAAAAAAAAAAAAAAAAAGGLAAA 266


>gi|157364934 fibrosin [Homo sapiens]
          Length = 460

 Score = 32.7 bits (73), Expect = 0.14
 Identities = 26/73 (35%), Positives = 34/73 (46%), Gaps = 5/73 (6%)

Query: 52  LGGPRGS-DPGRQTGHPSSALLPRSAAAAAANP---AAGGAAPARQPAASLRSL-RRASR 106
           L GP G+  PG++  HP+S      A  AAANP   A G   P   P+  +    R  S 
Sbjct: 121 LPGPYGALPPGQELSHPASLFTATGAVHAAANPFTAAPGAHGPFLSPSTHIDPFGRPTSF 180

Query: 107 ASGALVSHCVLQG 119
           AS A +S+    G
Sbjct: 181 ASLAALSNGAFGG 193


>gi|155722994 zinc finger CCCH-type containing 3 [Homo sapiens]
          Length = 948

 Score = 32.7 bits (73), Expect = 0.14
 Identities = 27/72 (37%), Positives = 37/72 (51%), Gaps = 7/72 (9%)

Query: 42  TERRARARLSLG-GPR----GSDPGRQTGHPSSALLPRSAAAAAANPAAGGAAPARQPAA 96
           ++  AR+R+S   GPR       P RQT  PSSA L  +A AA  +   G A+P+   A+
Sbjct: 816 SDATARSRVSASHGPRKPSASQRPTRQT--PSSAALTAAAVAAPPHCPGGSASPSSSKAS 873

Query: 97  SLRSLRRASRAS 108
           S  S   +  AS
Sbjct: 874 SSSSSSSSPPAS 885


>gi|158534059 formin binding protein 4 [Homo sapiens]
          Length = 1017

 Score = 32.3 bits (72), Expect = 0.18
 Identities = 20/45 (44%), Positives = 22/45 (48%), Gaps = 1/45 (2%)

Query: 44 RRARARLSLGGPRGSDPGRQTGHPSSALLPRSAAAAAANPAAGGA 88
          RR   +LS  GPRGS PGR    P     P S AA  + PA   A
Sbjct: 11 RRPILQLSPPGPRGSTPGRDP-EPEPDTEPDSTAAVPSQPAPSAA 54


>gi|239756937 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 294

 Score = 32.0 bits (71), Expect = 0.24
 Identities = 28/80 (35%), Positives = 31/80 (38%), Gaps = 2/80 (2%)

Query: 32  CAGISLSALGTERRARARLSLGGPRGSDPGRQTGHPSSALLPRSAAAAAANPAAGGAAPA 91
           C      + G ERR  +R    GP      R    P SA     AA  AA P A  A PA
Sbjct: 80  CGAHGPGSRGRERRRGSRDPPAGPVARARARGRSAPGSAQPASGAAGPAAAPEA--APPA 137

Query: 92  RQPAASLRSLRRASRASGAL 111
             PA    S +R S  S  L
Sbjct: 138 WDPATLPPSRKRNSLGSSPL 157


>gi|239751449 PREDICTED: hypothetical protein XP_002347867 [Homo
           sapiens]
          Length = 315

 Score = 32.0 bits (71), Expect = 0.24
 Identities = 28/80 (35%), Positives = 31/80 (38%), Gaps = 2/80 (2%)

Query: 32  CAGISLSALGTERRARARLSLGGPRGSDPGRQTGHPSSALLPRSAAAAAANPAAGGAAPA 91
           C      + G ERR  +R    GP      R    P SA     AA  AA P A  A PA
Sbjct: 80  CGAHGPGSRGRERRRGSRDPPAGPVARARARGRSAPGSAQPASGAAGPAAAPEA--APPA 137

Query: 92  RQPAASLRSLRRASRASGAL 111
             PA    S +R S  S  L
Sbjct: 138 WDPATLPPSRKRNSLGSSPL 157


>gi|239745954 PREDICTED: hypothetical protein XP_002343623 [Homo
           sapiens]
          Length = 315

 Score = 32.0 bits (71), Expect = 0.24
 Identities = 28/80 (35%), Positives = 31/80 (38%), Gaps = 2/80 (2%)

Query: 32  CAGISLSALGTERRARARLSLGGPRGSDPGRQTGHPSSALLPRSAAAAAANPAAGGAAPA 91
           C      + G ERR  +R    GP      R    P SA     AA  AA P A  A PA
Sbjct: 80  CGAHGPGSRGRERRRGSRDPPAGPVARARARGRSAPGSAQPASGAAGPAAAPEA--APPA 137

Query: 92  RQPAASLRSLRRASRASGAL 111
             PA    S +R S  S  L
Sbjct: 138 WDPATLPPSRKRNSLGSSPL 157


>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
          Length = 2752

 Score = 32.0 bits (71), Expect = 0.24
 Identities = 36/107 (33%), Positives = 44/107 (41%), Gaps = 10/107 (9%)

Query: 27   QAPSFCAGISLSALGTERRARARLSLGGPRGSDPGRQTGHPSSALL--PRSAAAAAANPA 84
            + P+  A +SL+  GT   A    S          R    P+SA L  PRSA A A    
Sbjct: 2301 RTPAALAALSLTGSGTPPTAANYPS--------SSRTPQAPASANLVGPRSAHATAPVNI 2352

Query: 85   AGGAAPARQPAASLRSLRRASRASGALVSHCVLQGQNGTVDDGRTSP 131
            AG    A    ASL S R A   SGA ++   +         GRTSP
Sbjct: 2353 AGSRTAAALAPASLTSARMAPALSGANLTSPRVPLSAYERVSGRTSP 2399



 Score = 30.8 bits (68), Expect = 0.53
 Identities = 33/125 (26%), Positives = 50/125 (40%), Gaps = 13/125 (10%)

Query: 34  GISLSALGTERRARARLSLGG-PRGSDPGRQTGHPSSALLPRSAAAAAANPAAGGAA--- 89
           G S S     RR+R R  +    R   P R++G   S    R   + +  PA  G +   
Sbjct: 613 GRSRSRTPARRRSRTRSPVRRRSRSRSPARRSGRSRSRTPARRGRSRSRTPARRGRSRSR 672

Query: 90  -PARQ--------PAASLRSLRRASRASGALVSHCVLQGQNGTVDDGRTSPCSETSLNKN 140
            PAR+        PA   RS  R  R   +     V +G++ +    R      +S  KN
Sbjct: 673 TPARRSGRSRSRTPARRGRSRSRTPRRGRSRSRSLVRRGRSHSRTPQRRGRSGSSSERKN 732

Query: 141 KNQTT 145
           K++T+
Sbjct: 733 KSRTS 737


>gi|110611914 progesterone receptor [Homo sapiens]
          Length = 933

 Score = 31.6 bits (70), Expect = 0.31
 Identities = 21/49 (42%), Positives = 25/49 (51%), Gaps = 2/49 (4%)

Query: 54  GPRGSDPGRQTGHPSSALLPRSAA-AAAANPAAGGAAPARQPAASLRSL 101
           GP    P +  G  S  LLPR    + +A+ AA GAAPA  PA  L  L
Sbjct: 473 GPFAPPPCKAPG-ASGCLLPRDGLPSTSASAAAAGAAPALYPALGLNGL 520


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.315    0.127    0.361 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,154,501
Number of Sequences: 37866
Number of extensions: 292051
Number of successful extensions: 3569
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 105
Number of HSP's successfully gapped in prelim test: 230
Number of HSP's that attempted gapping in prelim test: 3108
Number of HSP's gapped (non-prelim): 607
length of query: 162
length of database: 18,247,518
effective HSP length: 94
effective length of query: 68
effective length of database: 14,688,114
effective search space: 998791752
effective search space used: 998791752
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.