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Search of human proteins with 20149643
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|20149643 zinc finger, HIT type 6 [Homo sapiens]
(470 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|20149643 zinc finger, HIT type 6 [Homo sapiens] 956 0.0
gi|94721321 coiled-coil domain containing 11 [Homo sapiens] 46 6e-05
gi|78190492 retinitis pigmentosa GTPase regulator isoform C [Hom... 45 1e-04
gi|4759128 solute carrier family 24 (sodium/potassium/calcium ex... 40 0.003
gi|221219020 NYD-SP11 protein [Homo sapiens] 39 0.010
gi|239745089 PREDICTED: golgi autoantigen, golgin subfamily a-li... 39 0.013
gi|210032790 hypothetical protein LOC27146 [Homo sapiens] 38 0.023
gi|150378543 MYST histone acetyltransferase (monocytic leukemia)... 37 0.039
gi|150378463 MYST histone acetyltransferase (monocytic leukemia)... 37 0.039
gi|150378493 MYST histone acetyltransferase (monocytic leukemia)... 37 0.039
gi|153945728 microtubule-associated protein 1B [Homo sapiens] 37 0.039
gi|22094079 thyroid hormone receptor interactor 3 [Homo sapiens] 36 0.066
gi|221219026 pleckstrin homology-like domain, family B, member 1... 36 0.086
gi|221219024 pleckstrin homology-like domain, family B, member 1... 36 0.086
gi|38424073 pleckstrin homology-like domain, family B, member 1 ... 36 0.086
gi|169210053 PREDICTED: hypothetical protein [Homo sapiens] 35 0.11
gi|100816397 MYST histone acetyltransferase (monocytic leukemia)... 35 0.11
gi|118600971 transcription elongation factor A (SII)-like 6 [Hom... 35 0.11
gi|205277396 dynactin 1 isoform 4 [Homo sapiens] 35 0.15
gi|205277392 dynactin 1 isoform 3 [Homo sapiens] 35 0.15
gi|13259508 dynactin 1 isoform 2 [Homo sapiens] 35 0.15
gi|13259510 dynactin 1 isoform 1 [Homo sapiens] 35 0.15
gi|5453880 acidic (leucine-rich) nuclear phosphoprotein 32 famil... 35 0.15
gi|95147555 microtubule-associated protein 1A [Homo sapiens] 35 0.15
gi|82830424 gon-4-like isoform a [Homo sapiens] 35 0.15
gi|58530840 desmoplakin isoform I [Homo sapiens] 35 0.19
gi|44680105 caldesmon 1 isoform 1 [Homo sapiens] 35 0.19
gi|114205399 cyclic nucleotide gated channel beta 1 isoform a [H... 34 0.33
gi|225579095 S-phase cyclin A-associated protein in the ER isofo... 34 0.33
gi|134304846 Rb1-inducible coiled coil protein 1 isoform 2 [Homo... 34 0.33
>gi|20149643 zinc finger, HIT type 6 [Homo sapiens]
Length = 470
Score = 956 bits (2471), Expect = 0.0
Identities = 470/470 (100%), Positives = 470/470 (100%)
Query: 1 MEFAAENEGKSGGGLHSVAEGVRLSPEPGREGVRDLAGAEEFGGGEEGTGLTGIKEIGDG 60
MEFAAENEGKSGGGLHSVAEGVRLSPEPGREGVRDLAGAEEFGGGEEGTGLTGIKEIGDG
Sbjct: 1 MEFAAENEGKSGGGLHSVAEGVRLSPEPGREGVRDLAGAEEFGGGEEGTGLTGIKEIGDG 60
Query: 61 EEGSGQRPEEIPMDLTVVKQEIIDWPGTEGRLAGQWVEQEVEDRPEVKDENAGVLEVKQE 120
EEGSGQRPEEIPMDLTVVKQEIIDWPGTEGRLAGQWVEQEVEDRPEVKDENAGVLEVKQE
Sbjct: 61 EEGSGQRPEEIPMDLTVVKQEIIDWPGTEGRLAGQWVEQEVEDRPEVKDENAGVLEVKQE 120
Query: 121 TDSSLVVKEAKVGEPEVKEEKVKGEVMDWSEVKEEKDNLEIKQEEKFVGQCIKEELMHGE 180
TDSSLVVKEAKVGEPEVKEEKVKGEVMDWSEVKEEKDNLEIKQEEKFVGQCIKEELMHGE
Sbjct: 121 TDSSLVVKEAKVGEPEVKEEKVKGEVMDWSEVKEEKDNLEIKQEEKFVGQCIKEELMHGE 180
Query: 181 CVKEEKDFLKKEIVDDTKVKEEPPINHPVGCKRKLAMSRCETCGTEEAKYRCPRCMRYSC 240
CVKEEKDFLKKEIVDDTKVKEEPPINHPVGCKRKLAMSRCETCGTEEAKYRCPRCMRYSC
Sbjct: 181 CVKEEKDFLKKEIVDDTKVKEEPPINHPVGCKRKLAMSRCETCGTEEAKYRCPRCMRYSC 240
Query: 241 SLPCVKKHKAELTCNGVRDKTAYISIQQFTEMNLLSDYRFLEDVARTADHISRDAFLKRP 300
SLPCVKKHKAELTCNGVRDKTAYISIQQFTEMNLLSDYRFLEDVARTADHISRDAFLKRP
Sbjct: 241 SLPCVKKHKAELTCNGVRDKTAYISIQQFTEMNLLSDYRFLEDVARTADHISRDAFLKRP 300
Query: 301 ISNKYMYFMKNRARRQGINLKLLPNGFTKRKENSTFFDKKKQQFCWHVKLQFPQSQAEYI 360
ISNKYMYFMKNRARRQGINLKLLPNGFTKRKENSTFFDKKKQQFCWHVKLQFPQSQAEYI
Sbjct: 301 ISNKYMYFMKNRARRQGINLKLLPNGFTKRKENSTFFDKKKQQFCWHVKLQFPQSQAEYI 360
Query: 361 EKRVPDDKTINEILKPYIDPEKSDPVIRQRLKAYIRSQTGVQILMKIEYMQQNLVRYYEL 420
EKRVPDDKTINEILKPYIDPEKSDPVIRQRLKAYIRSQTGVQILMKIEYMQQNLVRYYEL
Sbjct: 361 EKRVPDDKTINEILKPYIDPEKSDPVIRQRLKAYIRSQTGVQILMKIEYMQQNLVRYYEL 420
Query: 421 DPYKSLLDNLRNKVIIEYPTLHVVLKGSNNDMKVLHQVKSESTKNVGNEN 470
DPYKSLLDNLRNKVIIEYPTLHVVLKGSNNDMKVLHQVKSESTKNVGNEN
Sbjct: 421 DPYKSLLDNLRNKVIIEYPTLHVVLKGSNNDMKVLHQVKSESTKNVGNEN 470
>gi|94721321 coiled-coil domain containing 11 [Homo sapiens]
Length = 514
Score = 46.2 bits (108), Expect = 6e-05
Identities = 75/349 (21%), Positives = 146/349 (41%), Gaps = 34/349 (9%)
Query: 95 QWVEQEVEDRPEVKDENAGVLEVKQETDSSLVVKEAKVGEPEVKEEKVKGEVMDWSEVKE 154
Q ++ +E++ + E +L+ K E + V E + + E+++ E++ + K
Sbjct: 117 QLKKETIEEKKDRMREKTKLLKEKNEKERQDFVAEKLDQQFRERCEELRVELLSIHQKKV 176
Query: 155 -EKDNLEIKQEEKFVGQCIKEELMHGECVKEEKDFLKKEIVDDTKVKEEPPINHPVGCKR 213
E+ +I E+ Q + EE M + +E++ +K + + ++E N +G
Sbjct: 177 CEERKAQIAFNEELSRQKLVEEQMFSKLWEEDRLAKEKREAQEARRQKELMENTRLGLNA 236
Query: 214 KLAMSRCETCGTEEAKYRCPRCM-------RYSCSLPCVKKHKAELTCNGVRDKTAYISI 266
++ + + T+ K R + ++ +KK KA+ + K I
Sbjct: 237 QITSIKAQRQATQLLKEEEARLVESNNAQIKHENEQDMLKKQKAKQETRTILQKALQERI 296
Query: 267 QQFTE-------MNLLSDYRFLEDVARTADHISR---DAFLKRPISNKYMYFMKNRARRQ 316
+ + +N+ R L+D+ AD + D ++ I +KY+ + + Q
Sbjct: 297 EHIQQEYRDEQDLNMKLVQRALQDLQEEADKKKQKREDMIREQKIYHKYLAQRREEEKAQ 356
Query: 317 GINL-KLLPNGFTKR---KENSTFFDKK-KQQFCWHV----KLQFP---QSQAEYIEKRV 364
++L K+ K+ +K+ ++Q V KLQ Q +A+ E+R
Sbjct: 357 EKEFDRILEEDKAKKLAEKDKELRLEKEARRQLVDEVMCTRKLQVQEKLQREAKEQEERA 416
Query: 365 PDDKTINEILKPYIDPEKSDPVIRQRLKAYIRSQTGVQILMKIEYMQQN 413
+ K INE LK EK + RQRL R Q+ M+I Y QQ+
Sbjct: 417 MEQKHINESLKELNCEEKENFARRQRLAQEYRK----QLQMQIAYQQQS 461
>gi|78190492 retinitis pigmentosa GTPase regulator isoform C [Homo
sapiens]
Length = 1152
Score = 45.1 bits (105), Expect = 1e-04
Identities = 56/201 (27%), Positives = 81/201 (40%), Gaps = 22/201 (10%)
Query: 6 ENEGKSGGGLHSVAEGVRLSPEPGREGVRDLAGAEEFGGGEEGTGLTGIKEIGDG----- 60
E EG+ G EG E G EG + G E G GEE G +E G+G
Sbjct: 839 EGEGEEEEGEGEEEEGEGKGEEEGEEGEGEEEGEEGEGEGEEEEGEGEGEEEGEGEGEEE 898
Query: 61 ----------------EEGSGQRPEEIPMDLTVVKQEIIDWPGTEGRLAGQWVEQEVEDR 104
EEG G+ EE ++E + G +G G+ E E E
Sbjct: 899 EGEGEGEEEGEGEGEEEEGEGKGEEEGEEGEGEGEEEEGEGEGEDGEGEGEEEEGEWEGE 958
Query: 105 PEVKDENAGVLEVKQETDSSLVVKEAKVGEPEVKEEKVKGEVMDWSEVKEEKDNLEIKQE 164
E + E G E + E + E + GE E +EE+ + E + E +EE + ++E
Sbjct: 959 EE-EGEGEGEEEGEGEGEEGEGEGEEEEGEGEGEEEEGEEEGEEEGEGEEEGEGEGEEEE 1017
Query: 165 EKFVGQCIKEELMHGECVKEE 185
E V ++ E GE +EE
Sbjct: 1018 EGEVEGEVEGEEGEGEGEEEE 1038
Score = 43.5 bits (101), Expect = 4e-04
Identities = 64/236 (27%), Positives = 93/236 (39%), Gaps = 45/236 (19%)
Query: 2 EFAAENEGKSGGGLHSVAEGVRLSPE---PGREGVRDLAGAEEFGGGE-----EGTGLTG 53
E E EG+ G G EG + G E + G EE G GE EG G G
Sbjct: 918 EGKGEEEGEEGEGEGEEEEGEGEGEDGEGEGEEEEGEWEGEEEEGEGEGEEEGEGEGEEG 977
Query: 54 IKEIGDGEEGSGQRPEEIPMDLTVVKQEIIDWPGTEGRLAGQWVEQEVEDRPEVKDENAG 113
E G+ EEG G+ EE + EG G E E E E ++E G
Sbjct: 978 EGE-GEEEEGEGEGEEEEGEE--------------EGEEEG---EGEEEGEGEGEEEEEG 1019
Query: 114 VLEVKQETDSSLVVKEAKVGEPEVKEEKVKGEVMD--------------WSEVKEEKDNL 159
+E + E + E + GE E +E + +GE + + E EE++
Sbjct: 1020 EVEGEVEGEEGEGEGEEEEGEEEGEEREKEGEGEENRRNREEEEEEEGKYQETGEEENER 1079
Query: 160 EIKQEEKFVGQCIKEELMHGECVKEEKDFLKKEIVDDTKVKEEPPINHPVGCKRKL 215
+ +E K V + IK + +G + K + KK + + +E PV KR L
Sbjct: 1080 QDGEEYKKVSK-IKGSVKYG----KHKTYQKKSVTNTQGNGKEQRSKMPVQSKRLL 1130
Score = 43.1 bits (100), Expect = 5e-04
Identities = 57/196 (29%), Positives = 83/196 (42%), Gaps = 38/196 (19%)
Query: 6 ENEGKSGGGLHSVAEGVRLSPEPGREGVRDLAGAEEFGG--GEEGTGLT----------- 52
E EGK G V EG R E G + AG EE G G++G G
Sbjct: 752 EGEGKEEGEGEEV-EGER-EKEEGERKKEERAGKEEKGEEEGDQGEGEEEETEGRGEEKE 809
Query: 53 --GIKEIGDGEEGSGQRPEEIPMDLTVVKQEIIDWPGTEGRLAGQWVEQEVEDRPEVKDE 110
G E G+ EEG G+R EE E G+ E E E+ +E
Sbjct: 810 EGGEVEGGEVEEGKGEREEE------------------EEEGEGEEEEGEGEEEEGEGEE 851
Query: 111 NAGVLEVKQETDSSLVVKEAKVGEPEVKEEKVKGEVMDWSEVKEEKDNLEIKQEEKFVGQ 170
G + ++E + +E + GE E +EE+ +GE + E + E++ E + EE+ G+
Sbjct: 852 EEGEGKGEEEGEEGEGEEEGEEGEGEGEEEEGEGEGEEEGEGEGEEEEGEGEGEEEGEGE 911
Query: 171 CIKEELMHGECVKEEK 186
+EE GE EE+
Sbjct: 912 GEEEE---GEGKGEEE 924
Score = 41.2 bits (95), Expect = 0.002
Identities = 55/197 (27%), Positives = 81/197 (41%), Gaps = 20/197 (10%)
Query: 2 EFAAENEGKSGGGLHSVAEGVRLSPEPGREGVRDLAGAEEFGGGEEGTGLTGI------- 54
E A + E K G + + R + G EE G GEE G
Sbjct: 695 ELAEKEEWKKRDGEEQEQKEREQGHQKERNQEMEEGGEEEHGEGEEEEGDREEEEEKEGE 754
Query: 55 -KEIGDGEEGSGQRPE---EIPMDLTVVKQEIIDWPGTEGRLAGQWVEQEVEDRPEVKDE 110
KE G+GEE G+R + E + K+E G E G+ E+E E R E K+E
Sbjct: 755 GKEEGEGEEVEGEREKEEGERKKEERAGKEE----KGEEEGDQGEGEEEETEGRGEEKEE 810
Query: 111 NAGVLEVKQETDSSLVVKEAKVGEPEVKEEKVKGEVMDWSEVKEEKDNLEIKQEEKFVGQ 170
V + E +E + GE E EE+ +GE + +EE + ++ E+ G+
Sbjct: 811 GGEVEGGEVEEGKGEREEEEEEGEGE--EEEGEGEEEEGEGEEEEGEGKGEEEGEEGEGE 868
Query: 171 CIKEELMHGECVKEEKD 187
EE GE EE++
Sbjct: 869 ---EEGEEGEGEGEEEE 882
Score = 38.1 bits (87), Expect = 0.017
Identities = 48/152 (31%), Positives = 70/152 (46%), Gaps = 31/152 (20%)
Query: 46 EEGTGLTGIKEIGDGEEGSGQRPEEIPMDLTVVKQEIIDWPGTEGRLAGQWV----EQEV 101
EEG G +E G+GEE G R EE + EG+ G+ E+E
Sbjct: 728 EEG----GEEEHGEGEEEEGDREEEEEKE-------------GEGKEEGEGEEVEGEREK 770
Query: 102 EDRPEVKDENAGVLEV-KQETDSSLVVKEAKVGEPEVKEEKVKGEVMDWSEVKEEKDNLE 160
E+ K+E AG E ++E D +E G E KEE G ++ EV+E K E
Sbjct: 771 EEGERKKEERAGKEEKGEEEGDQGEGEEEETEGRGEEKEE---GGEVEGGEVEEGKGERE 827
Query: 161 IKQEEKFVGQCIKEELMHGECVKEEKDFLKKE 192
++EE G+ +EE GE +EE + ++E
Sbjct: 828 EEEEE---GEGEEEE---GEGEEEEGEGEEEE 853
Score = 32.3 bits (72), Expect = 0.95
Identities = 45/168 (26%), Positives = 72/168 (42%), Gaps = 20/168 (11%)
Query: 43 GGGEEGT-----GLTGIKEIGDGEEGSGQRPEEIPMDLTVVKQEIIDWPGTEGRLAGQWV 97
GG +E T LT E+ +G+ S E+ P D EG +
Sbjct: 617 GGRKEKTEILSDDLTDKAEVSEGKAKSVGEAEDGPEGRG-------DGTCEEGSSGAEHW 669
Query: 98 EQEVEDRPEVKDENAGVLEVKQETDSSLVVKEA---KVGEPEVKEEKVKGEVMDWSEVKE 154
+ E ++ E KD+ G +E E + L KE + GE + ++E+ +G + ++ E
Sbjct: 670 QDEEREKGE-KDKGRGEMERPGEGEKELAEKEEWKKRDGEEQEQKEREQGHQKERNQEME 728
Query: 155 EKDNLEIKQEEKFVGQCIKEELMHGECVKEEKDFLKKEIVDDTKVKEE 202
E E + E+ G +EE GE KEE + E V+ + KEE
Sbjct: 729 EGGEEEHGEGEEEEGDREEEEEKEGE-GKEEGE---GEEVEGEREKEE 772
>gi|4759128 solute carrier family 24 (sodium/potassium/calcium
exchanger), member 1 [Homo sapiens]
Length = 1099
Score = 40.4 bits (93), Expect = 0.003
Identities = 50/172 (29%), Positives = 70/172 (40%), Gaps = 28/172 (16%)
Query: 7 NEGKSGGGLHSVAEGVRLSPEPGREGVRDLAG-AEEFGGGE---EGTGLTGIKEIGDGEE 62
++ ++ GG VAE PG EG G EE GGE EG G T + G GEE
Sbjct: 736 DQKENPGGQEDVAEAESTGEMPGEEGETAGEGETEEKSGGETQPEGEGETETQ--GKGEE 793
Query: 63 --------GSGQRPEEIPMDLTVVKQEIIDWPGTEGRLAGQWVEQEVEDRPEVKDENAGV 114
G G E D + E + G EG Q E E+ E K++ GV
Sbjct: 794 CEDENEAEGKGDNEGE---DEGEIHAEDGEMKGNEGETESQ--ELSAENHGEAKNDEKGV 848
Query: 115 LEVKQETDSSLVVKEAKVGEPEVKEEKVKGEVMDWSEVKEEKDNLEIKQEEK 166
+ +E + E E +EE+ E +EE++ E ++EEK
Sbjct: 849 EDGGGSDGGDSEEEEEEEEEQEEEEEE---------EEQEEEEEEEEEEEEK 891
Score = 30.4 bits (67), Expect = 3.6
Identities = 28/107 (26%), Positives = 42/107 (39%), Gaps = 14/107 (13%)
Query: 2 EFAAENEGKSGGGLHSV----------AEGVRLSPEPGREGVRDLAGAEEFGGGEEGTGL 51
E +NEG+ G +H+ E LS E E D G E+ GG + G
Sbjct: 801 EGKGDNEGEDEGEIHAEDGEMKGNEGETESQELSAENHGEAKNDEKGVEDGGGSDGGDS- 859
Query: 52 TGIKEIGDGEEGSGQRPEEIPMDLTVVKQEIIDWPGTEGRLAGQWVE 98
+E + EE + EE + ++E + G E L+ W E
Sbjct: 860 ---EEEEEEEEEQEEEEEEEEQEEEEEEEEEEEEKGNEEPLSLDWPE 903
>gi|221219020 NYD-SP11 protein [Homo sapiens]
Length = 2873
Score = 38.9 bits (89), Expect = 0.010
Identities = 32/97 (32%), Positives = 52/97 (53%), Gaps = 4/97 (4%)
Query: 98 EQEVEDRPEVKDENAGVLEVKQETDSSLVVKEAKVGEPEVKEEKVKGEVMDWSEVKEEKD 157
E+E + EV++E E ++E + V KE + + + KE+K K EV + EV EEK+
Sbjct: 2253 EEEEREEEEVREEEEERKE-EEEGEEKQVEKEEEEKKKKKKEKK-KEEVQEKEEVFEEKE 2310
Query: 158 NLEIKQEEKFVGQCIKEE--LMHGECVKEEKDFLKKE 192
+ ++E + + +EE E V EK+ LKKE
Sbjct: 2311 EIMSEEETESLSDEEEEEESCSLEEEVDREKEILKKE 2347
Score = 37.0 bits (84), Expect = 0.039
Identities = 48/207 (23%), Positives = 91/207 (43%), Gaps = 37/207 (17%)
Query: 5 AENEGKSGGGLHSVAE-GVRLSPEPGREGVR--------DLAGAEEFGGGEEGTGLTGIK 55
A+ EGK ++A+ G +LS E + + + EE ++G L +K
Sbjct: 1631 AQAEGKFAQKEETLAQRGEKLSQEAEKLAQKRKKLAKKWEKVAREEEKLAKKGGKLAEVK 1690
Query: 56 EIGDGEEGSGQRPEEIPMDLTVVKQEIIDWPGTEGRLAGQWVEQEVEDRPEVKDENAGVL 115
I Q+ EE+P +++ +DW E + QE+E+ +E +
Sbjct: 1691 NI------LAQKVEELPQ-----REQNLDWQEKE-------LAQELEELEWDMEELSWKE 1732
Query: 116 EVKQETDSSLVVKEAKVGEPEVKEEKVKGEVMDWSEVKEEKDNLEIKQEEKFVGQCIKEE 175
E + + LV ++ K+ E E E + W K ++ ++ QEE+ + Q ++
Sbjct: 1733 EELNQEEGKLVEEKKKLAEEE--------EALAWQREKLSEEETKLAQEEELLIQEKEKL 1784
Query: 176 LMHGECVKEEKDFL--KKEIVDDTKVK 200
H E + EE++ L K+E + + K+K
Sbjct: 1785 AQHKEKMPEEEERLGRKREQLIEKKMK 1811
Score = 33.9 bits (76), Expect = 0.33
Identities = 36/150 (24%), Positives = 66/150 (44%), Gaps = 4/150 (2%)
Query: 57 IGDGEEGSGQRPEEIPMDLTVVKQEIIDWPGTEGRLAGQWVEQEVEDRPEVKDENAGVLE 116
+ D EEG + E IP ++ G + + EVE +E +L+
Sbjct: 2176 LDDEEEGGIEEEEVIPFLKRRWRKRKEAKRGDKPKEKFSSQVDEVESEEHFSEEMESLLD 2235
Query: 117 VKQETDSSLVVKEAKVGEPEVKEEKVKGEVMDWSEVKEEKDNLEIKQEE----KFVGQCI 172
++ +S +E + E E +EE+ E + + +EE + ++++EE K +
Sbjct: 2236 ELEKQESLSSEEEEEREEEEEREEEEVREEEEERKEEEEGEEKQVEKEEEEKKKKKKEKK 2295
Query: 173 KEELMHGECVKEEKDFLKKEIVDDTKVKEE 202
KEE+ E V EEK+ + E ++ EE
Sbjct: 2296 KEEVQEKEEVFEEKEEIMSEEETESLSDEE 2325
>gi|239745089 PREDICTED: golgi autoantigen, golgin subfamily a-like
[Homo sapiens]
Length = 828
Score = 38.5 bits (88), Expect = 0.013
Identities = 40/116 (34%), Positives = 61/116 (52%), Gaps = 17/116 (14%)
Query: 98 EQEVEDRPEVKDENAGVLEVK-QETDSSLVVKEAKVGEPEVK----EEKVKGEVMDWSEV 152
EQE ED+ + ++E E K QE + + +E K+ E E K EEK++G+ E
Sbjct: 620 EQEEEDKMQEQEEMMWEQEEKMQEQEEKMWEQEEKMREQEEKMREQEEKMQGQEEKMREQ 679
Query: 153 KEEKDNLEIK---QEEKFVGQCIKEELMHGECVKEEKDFLKKEIV---DDTKVKEE 202
+E+ E K QEEK GQ EE M G+ EEK + ++E + ++ + KEE
Sbjct: 680 EEKMQGQEEKMREQEEKMRGQ---EEKMWGQ---EEKMWGQEEKMWGQEEMREKEE 729
>gi|210032790 hypothetical protein LOC27146 [Homo sapiens]
Length = 1060
Score = 37.7 bits (86), Expect = 0.023
Identities = 28/114 (24%), Positives = 59/114 (51%), Gaps = 6/114 (5%)
Query: 95 QWVEQEVEDRPEVKDENAGVLEVKQETDSSLVVKEAKVGEPEVKEEKVKGEVMDWS-EVK 153
QW E+E + R + + + + ++ + L + K+ + + +K+K + D ++K
Sbjct: 246 QWQEKESDLRKNFQVQESALQAQVRKLEGDLEHRGRKISDLKKYAQKLKERIQDLDVQLK 305
Query: 154 E-EKDNLEIKQEEKFVGQCI---KEELMHGEC-VKEEKDFLKKEIVDDTKVKEE 202
E ++N E+K K +G+ + K+ +M EC ++ D +K E+V + KV E
Sbjct: 306 EARQENSELKGTAKKLGEKLAVAKDRMMLQECRGTQQTDAMKTELVSENKVLRE 359
>gi|150378543 MYST histone acetyltransferase (monocytic leukemia) 3
[Homo sapiens]
Length = 2004
Score = 37.0 bits (84), Expect = 0.039
Identities = 41/152 (26%), Positives = 70/152 (46%), Gaps = 12/152 (7%)
Query: 64 SGQRPEEIPMDLTVVKQEIIDWPGTEGRLAGQWVEQEVEDRPEVKDENAGVLEVKQETDS 123
+G++P+ + TV +E D P E R + ++ E E+ E ++E+A EV + +
Sbjct: 1198 AGRKPKIQESEETVEPKE--DMPLPEERKEEEEMQAEAEEAEEGEEEDAASSEVPAASPA 1255
Query: 124 -SLVVKEAKVGEPEVKEEKVKGEVM-DWSEVKEEKDNLEIKQEEKFVGQCIKEELMHGEC 181
S E + EPEV+EE+ K V + + +EE+ LE + E+ +
Sbjct: 1256 DSSNSPETETKEPEVEEEEEKPRVSEEQRQSEEEQQELEEPEPEEEEDAAAETAQNDDHD 1315
Query: 182 VKEEKD-----FLKKEIVDD---TKVKEEPPI 205
+E D KKE+ + VKEEP +
Sbjct: 1316 ADDEDDGHLESTKKKELEEQPTREDVKEEPGV 1347
Score = 30.4 bits (67), Expect = 3.6
Identities = 50/200 (25%), Positives = 75/200 (37%), Gaps = 24/200 (12%)
Query: 26 PEPGREGVRDLAGAEEFGGGEEGTGLTGIKEIGDGEEGSGQRPEEIPMDLTVVKQEIIDW 85
PE +E A AEE GEE + + S PE + V ++E
Sbjct: 1220 PEERKEEEEMQAEAEEAEEGEEEDAASSEVPAASPADSSNS-PETETKEPEVEEEEEKPR 1278
Query: 86 PGTEGRLAGQWVEQEVEDRPEVKDENAGVLEVKQ--------ETDSSLVVKEAKVGEPEV 137
E R + + EQ+ + PE ++E E Q E D L + K E +
Sbjct: 1279 VSEEQRQSEE--EQQELEEPEPEEEEDAAAETAQNDDHDADDEDDGHLESTKKKELEEQP 1336
Query: 138 KEEKVKGEV----------MDWSEVK---EEKDNLEIKQEEKFVGQCIKEELMHGECVKE 184
E VK E M S K +E+ L+ ++E+ + E M G
Sbjct: 1337 TREDVKEEPGVQESFLDANMQKSREKIKDKEETELDSEEEQPSHDTSVVSEQMAGSEDDH 1396
Query: 185 EKDFLKKEIVDDTKVKEEPP 204
E+D KE + + K +EE P
Sbjct: 1397 EEDSHTKEELIELKEEEEIP 1416
>gi|150378463 MYST histone acetyltransferase (monocytic leukemia) 3
[Homo sapiens]
Length = 2004
Score = 37.0 bits (84), Expect = 0.039
Identities = 41/152 (26%), Positives = 70/152 (46%), Gaps = 12/152 (7%)
Query: 64 SGQRPEEIPMDLTVVKQEIIDWPGTEGRLAGQWVEQEVEDRPEVKDENAGVLEVKQETDS 123
+G++P+ + TV +E D P E R + ++ E E+ E ++E+A EV + +
Sbjct: 1198 AGRKPKIQESEETVEPKE--DMPLPEERKEEEEMQAEAEEAEEGEEEDAASSEVPAASPA 1255
Query: 124 -SLVVKEAKVGEPEVKEEKVKGEVM-DWSEVKEEKDNLEIKQEEKFVGQCIKEELMHGEC 181
S E + EPEV+EE+ K V + + +EE+ LE + E+ +
Sbjct: 1256 DSSNSPETETKEPEVEEEEEKPRVSEEQRQSEEEQQELEEPEPEEEEDAAAETAQNDDHD 1315
Query: 182 VKEEKD-----FLKKEIVDD---TKVKEEPPI 205
+E D KKE+ + VKEEP +
Sbjct: 1316 ADDEDDGHLESTKKKELEEQPTREDVKEEPGV 1347
Score = 30.4 bits (67), Expect = 3.6
Identities = 50/200 (25%), Positives = 75/200 (37%), Gaps = 24/200 (12%)
Query: 26 PEPGREGVRDLAGAEEFGGGEEGTGLTGIKEIGDGEEGSGQRPEEIPMDLTVVKQEIIDW 85
PE +E A AEE GEE + + S PE + V ++E
Sbjct: 1220 PEERKEEEEMQAEAEEAEEGEEEDAASSEVPAASPADSSNS-PETETKEPEVEEEEEKPR 1278
Query: 86 PGTEGRLAGQWVEQEVEDRPEVKDENAGVLEVKQ--------ETDSSLVVKEAKVGEPEV 137
E R + + EQ+ + PE ++E E Q E D L + K E +
Sbjct: 1279 VSEEQRQSEE--EQQELEEPEPEEEEDAAAETAQNDDHDADDEDDGHLESTKKKELEEQP 1336
Query: 138 KEEKVKGEV----------MDWSEVK---EEKDNLEIKQEEKFVGQCIKEELMHGECVKE 184
E VK E M S K +E+ L+ ++E+ + E M G
Sbjct: 1337 TREDVKEEPGVQESFLDANMQKSREKIKDKEETELDSEEEQPSHDTSVVSEQMAGSEDDH 1396
Query: 185 EKDFLKKEIVDDTKVKEEPP 204
E+D KE + + K +EE P
Sbjct: 1397 EEDSHTKEELIELKEEEEIP 1416
>gi|150378493 MYST histone acetyltransferase (monocytic leukemia) 3
[Homo sapiens]
Length = 2004
Score = 37.0 bits (84), Expect = 0.039
Identities = 41/152 (26%), Positives = 70/152 (46%), Gaps = 12/152 (7%)
Query: 64 SGQRPEEIPMDLTVVKQEIIDWPGTEGRLAGQWVEQEVEDRPEVKDENAGVLEVKQETDS 123
+G++P+ + TV +E D P E R + ++ E E+ E ++E+A EV + +
Sbjct: 1198 AGRKPKIQESEETVEPKE--DMPLPEERKEEEEMQAEAEEAEEGEEEDAASSEVPAASPA 1255
Query: 124 -SLVVKEAKVGEPEVKEEKVKGEVM-DWSEVKEEKDNLEIKQEEKFVGQCIKEELMHGEC 181
S E + EPEV+EE+ K V + + +EE+ LE + E+ +
Sbjct: 1256 DSSNSPETETKEPEVEEEEEKPRVSEEQRQSEEEQQELEEPEPEEEEDAAAETAQNDDHD 1315
Query: 182 VKEEKD-----FLKKEIVDD---TKVKEEPPI 205
+E D KKE+ + VKEEP +
Sbjct: 1316 ADDEDDGHLESTKKKELEEQPTREDVKEEPGV 1347
Score = 30.4 bits (67), Expect = 3.6
Identities = 50/200 (25%), Positives = 75/200 (37%), Gaps = 24/200 (12%)
Query: 26 PEPGREGVRDLAGAEEFGGGEEGTGLTGIKEIGDGEEGSGQRPEEIPMDLTVVKQEIIDW 85
PE +E A AEE GEE + + S PE + V ++E
Sbjct: 1220 PEERKEEEEMQAEAEEAEEGEEEDAASSEVPAASPADSSNS-PETETKEPEVEEEEEKPR 1278
Query: 86 PGTEGRLAGQWVEQEVEDRPEVKDENAGVLEVKQ--------ETDSSLVVKEAKVGEPEV 137
E R + + EQ+ + PE ++E E Q E D L + K E +
Sbjct: 1279 VSEEQRQSEE--EQQELEEPEPEEEEDAAAETAQNDDHDADDEDDGHLESTKKKELEEQP 1336
Query: 138 KEEKVKGEV----------MDWSEVK---EEKDNLEIKQEEKFVGQCIKEELMHGECVKE 184
E VK E M S K +E+ L+ ++E+ + E M G
Sbjct: 1337 TREDVKEEPGVQESFLDANMQKSREKIKDKEETELDSEEEQPSHDTSVVSEQMAGSEDDH 1396
Query: 185 EKDFLKKEIVDDTKVKEEPP 204
E+D KE + + K +EE P
Sbjct: 1397 EEDSHTKEELIELKEEEEIP 1416
>gi|153945728 microtubule-associated protein 1B [Homo sapiens]
Length = 2468
Score = 37.0 bits (84), Expect = 0.039
Identities = 45/150 (30%), Positives = 67/150 (44%), Gaps = 19/150 (12%)
Query: 55 KEIGDGEEGSGQRPEEIPMDLTVVKQEIIDWPGTEGRLAGQWVEQEVEDRPEVKDENAGV 114
KE+ EE S + E T VK + + V++E + +PE K E
Sbjct: 605 KEVPSKEEPSPVKAEVAEKQATDVKPKAAK---------EKTVKKETKVKPEDKKEE--- 652
Query: 115 LEVKQETDSSLVVKEAKVGEPEVKEEKVKGEVMDWSEVKEEKDNLEIKQEEKFVGQCIKE 174
K++ + KE K P KEEK K E + EVK+E E K+ +K V +
Sbjct: 653 ---KEKPKKEVAKKEDKT--PIKKEEKPKKEEVK-KEVKKEIKKEEKKEPKKEVKKETPP 706
Query: 175 ELMHGECVKEEKDFLKKEIVDDTK-VKEEP 203
+ + E KEEK +KKE + K +K+ P
Sbjct: 707 KEVKKEVKKEEKKEVKKEEKEPKKEIKKLP 736
Score = 32.3 bits (72), Expect = 0.95
Identities = 35/146 (23%), Positives = 54/146 (36%), Gaps = 20/146 (13%)
Query: 30 REGVRDLAGAEEFGGGEEGTGLTGIKEIGDGEEGSGQRPEEIPMDLTVVKQEIIDWPGTE 89
++GV D+ E+ EG G E GD EE + E P + G E
Sbjct: 917 KQGVDDIEKFED-----EGAGFEESSETGDYEEKAETEEAEEPEE-----------DGEE 960
Query: 90 GRLAGQWVEQEVEDRPEVKDENAGVLEVKQETDSSLVVKEAKVGEPEVKEEKVKGEVMDW 149
ED K E + K+E+ V E ++ E KGE
Sbjct: 961 HVCVSASKHSPTEDEESAKAEADAYIREKRES----VASGDDRAEEDMDEAIEKGEAEQS 1016
Query: 150 SEVKEEKDNLEIKQEEKFVGQCIKEE 175
E +E+D E +EE++ + ++ E
Sbjct: 1017 EEEADEEDKAEDAREEEYEPEKMEAE 1042
>gi|22094079 thyroid hormone receptor interactor 3 [Homo sapiens]
Length = 155
Score = 36.2 bits (82), Expect = 0.066
Identities = 17/36 (47%), Positives = 21/36 (58%), Gaps = 3/36 (8%)
Query: 220 CETCGTEEAKYRCPRCMRYSCSLPCVKKHKAELTCN 255
C C E+ KYRCP C CS+ C +KHK + CN
Sbjct: 11 CVIC-LEKPKYRCPACRVPYCSVVCFRKHKEQ--CN 43
>gi|221219026 pleckstrin homology-like domain, family B, member 1
isoform b [Homo sapiens]
Length = 1319
Score = 35.8 bits (81), Expect = 0.086
Identities = 45/207 (21%), Positives = 84/207 (40%), Gaps = 26/207 (12%)
Query: 2 EFAAENEGKSGGGLHSVAEGVRLSPEPGREGVRDLAGAEEFGGGEEGTGL---------- 51
E++ + G G L S+ E GR R LAGA E G
Sbjct: 623 EYSRADGGPEAGELPSIGEATAALALAGRRPSRGLAGASGRSSEEPGVATQRLWESMERS 682
Query: 52 --TGIKEIGDGEEGSGQRPEEIPMDLTVVKQEIIDWPGTEGRLAG---------QWVEQE 100
+KE E + Q E+ P T ++ E++ ++ G + +EQ+
Sbjct: 683 DEENLKEECSSTESTQQEHEDAPS--TKLQGEVLALEEERAQVLGHVEQLKVRVKELEQQ 740
Query: 101 VEDRPEVKDENAGVLEVKQETDSSLVVKEAKVGEPEVKEEKVKGEVMDWSEVKEEKDNLE 160
+++ + +L+ ++E + +L+ KE K + +++E+ V E E +E + LE
Sbjct: 741 LQESAREAEMERALLQGEREAERALLQKEQKAVD-QLQEKLVALETGIQKERDKEAEALE 799
Query: 161 IKQEEKFVGQCIKEELMHGECVKEEKD 187
E K ++L V+EE++
Sbjct: 800 --TETKLFEDLEFQQLERESRVEEERE 824
>gi|221219024 pleckstrin homology-like domain, family B, member 1
isoform a [Homo sapiens]
Length = 1377
Score = 35.8 bits (81), Expect = 0.086
Identities = 45/207 (21%), Positives = 84/207 (40%), Gaps = 26/207 (12%)
Query: 2 EFAAENEGKSGGGLHSVAEGVRLSPEPGREGVRDLAGAEEFGGGEEGTGL---------- 51
E++ + G G L S+ E GR R LAGA E G
Sbjct: 623 EYSRADGGPEAGELPSIGEATAALALAGRRPSRGLAGASGRSSEEPGVATQRLWESMERS 682
Query: 52 --TGIKEIGDGEEGSGQRPEEIPMDLTVVKQEIIDWPGTEGRLAG---------QWVEQE 100
+KE E + Q E+ P T ++ E++ ++ G + +EQ+
Sbjct: 683 DEENLKEECSSTESTQQEHEDAPS--TKLQGEVLALEEERAQVLGHVEQLKVRVKELEQQ 740
Query: 101 VEDRPEVKDENAGVLEVKQETDSSLVVKEAKVGEPEVKEEKVKGEVMDWSEVKEEKDNLE 160
+++ + +L+ ++E + +L+ KE K + +++E+ V E E +E + LE
Sbjct: 741 LQESAREAEMERALLQGEREAERALLQKEQKAVD-QLQEKLVALETGIQKERDKEAEALE 799
Query: 161 IKQEEKFVGQCIKEELMHGECVKEEKD 187
E K ++L V+EE++
Sbjct: 800 --TETKLFEDLEFQQLERESRVEEERE 824
>gi|38424073 pleckstrin homology-like domain, family B, member 1
isoform a [Homo sapiens]
Length = 1377
Score = 35.8 bits (81), Expect = 0.086
Identities = 45/207 (21%), Positives = 84/207 (40%), Gaps = 26/207 (12%)
Query: 2 EFAAENEGKSGGGLHSVAEGVRLSPEPGREGVRDLAGAEEFGGGEEGTGL---------- 51
E++ + G G L S+ E GR R LAGA E G
Sbjct: 623 EYSRADGGPEAGELPSIGEATAALALAGRRPSRGLAGASGRSSEEPGVATQRLWESMERS 682
Query: 52 --TGIKEIGDGEEGSGQRPEEIPMDLTVVKQEIIDWPGTEGRLAG---------QWVEQE 100
+KE E + Q E+ P T ++ E++ ++ G + +EQ+
Sbjct: 683 DEENLKEECSSTESTQQEHEDAPS--TKLQGEVLALEEERAQVLGHVEQLKVRVKELEQQ 740
Query: 101 VEDRPEVKDENAGVLEVKQETDSSLVVKEAKVGEPEVKEEKVKGEVMDWSEVKEEKDNLE 160
+++ + +L+ ++E + +L+ KE K + +++E+ V E E +E + LE
Sbjct: 741 LQESAREAEMERALLQGEREAERALLQKEQKAVD-QLQEKLVALETGIQKERDKEAEALE 799
Query: 161 IKQEEKFVGQCIKEELMHGECVKEEKD 187
E K ++L V+EE++
Sbjct: 800 --TETKLFEDLEFQQLERESRVEEERE 824
>gi|169210053 PREDICTED: hypothetical protein [Homo sapiens]
Length = 185
Score = 35.4 bits (80), Expect = 0.11
Identities = 43/159 (27%), Positives = 75/159 (47%), Gaps = 26/159 (16%)
Query: 60 GEEGSGQRPEEIPMDLTVVKQEIIDWPGTEGRLAGQWVEQEVEDRPEVKDENAGVLEVKQ 119
G EG +P + +T + + + P T + +W+++ P VKD ++
Sbjct: 30 GREGWRVKPAHTLLAMTSQRNKELR-PSTCLEVEEKWLQRWAVGLP-VKDSGVSQAKIWG 87
Query: 120 ETDSS------------LVVKEAK------VGEPEVKEEKVKGEVMDWSEVKEEKDNLEI 161
+ D S LV +E V E EV+EE+ + E + E KEE + E
Sbjct: 88 KNDLSAGNRLSVARTAALVAEECSAQQGLPVEEEEVEEEEEEVEEEEKEEEKEEDEEEEE 147
Query: 162 KQEEKFVGQCIKEELMHGECVKEEKDFLKKEIVDDTKVK 200
K+EEK + +EE G+ ++EEK +++EI DT+++
Sbjct: 148 KEEEKEEDE--EEEEKEGKKMEEEK--VEEEI--DTEIQ 180
>gi|100816397 MYST histone acetyltransferase (monocytic leukemia) 4
[Homo sapiens]
Length = 2073
Score = 35.4 bits (80), Expect = 0.11
Identities = 28/105 (26%), Positives = 47/105 (44%), Gaps = 6/105 (5%)
Query: 98 EQEVEDRPEVKDENAGVLEVKQETDSSLVVKEAKVGEPEVKEEKVKGEVMDWSEVKEEKD 157
E+E E+ E +E G V+++ D + K + EPE+ EK +D E +EE+D
Sbjct: 1359 EEEEEEEEEEGEEEEGGGNVEKDPDGA---KSQEKEEPEISTEKEDSARLDDHEEEEEED 1415
Query: 158 NLEIKQEEKFVGQCIKEELMHGECVKEEKDFLKKEIVDDTKVKEE 202
E+ E+ H E + EK+ L +E + +E
Sbjct: 1416 EEPSHNEDH---DADDEDDSHMESAEVEKEELPRESFKEVLENQE 1457
>gi|118600971 transcription elongation factor A (SII)-like 6 [Homo
sapiens]
Length = 183
Score = 35.4 bits (80), Expect = 0.11
Identities = 41/161 (25%), Positives = 63/161 (39%), Gaps = 36/161 (22%)
Query: 2 EFAAENEGKSGGGLHSVAEGV-------RLSPEPGREGVRDLAGAEEFGGGEEGTGLTGI 54
E ++EGKS AEG + EPG EG + G++E G EG G
Sbjct: 21 EVEPDDEGKSDEEEKPDAEGKTECEGKRKAEGEPGDEGQLEDKGSQEKQGKSEGEG---- 76
Query: 55 KEIGDGEEGSGQRPEEIPMDLTVVKQEIIDWPGTEGRLAGQWVEQEVEDRPEVKDENAGV 114
K G+G+ S +PE P E R AG +V ++ + + +
Sbjct: 77 KPQGEGKPASQAKPEGQPR-------------AAEKRPAGDYVPRKAKRKTD-------- 115
Query: 115 LEVKQETDSSLVVKEAKVGEPEVKEEKVKGEVMDWSEVKEE 155
+ TD S + + E + E++ E D S +EE
Sbjct: 116 ----RGTDDSPKDSQEDLQERHLSSEEMMRECGDVSRAQEE 152
>gi|205277396 dynactin 1 isoform 4 [Homo sapiens]
Length = 1139
Score = 35.0 bits (79), Expect = 0.15
Identities = 41/180 (22%), Positives = 80/180 (44%), Gaps = 17/180 (9%)
Query: 26 PEPGREGVRDLAGAEEFGGGEEGTGLTGIKEIGDGEEGSGQRPEEIPMDLTVVKQEIIDW 85
P+P R +AGA G +G G+ P + P+ ++ ++
Sbjct: 16 PKPTRPASTGVAGASS------SLGPSGSASAGELSSSEPSTPAQTPLAAPIIPTPVLTS 69
Query: 86 PGTEGRLAGQWVEQEVEDRPEVKDENAGVLEVKQETDSSLVVKEAKVGEPEVKEEKVKGE 145
PG L E+E R +V+D LE K ET L E K E+++ K++ E
Sbjct: 70 PGAVPPLPSPSKEEE-GLRAQVRD-----LEEKLET-LRLKRAEDKAKLKELEKHKIQLE 122
Query: 146 -VMDW-SEVKEEKDNLE--IKQEEKFVGQCIKEELMHGECVKEEKDFLKKEIVDDTKVKE 201
V +W S+++E++ +L+ +K+ K + ++ + + E + + D ++ +D +E
Sbjct: 123 QVQEWKSKMQEQQADLQRRLKEARKEAKEALEAKERYMEEMADTADAIEMATLDKEMAEE 182
>gi|205277392 dynactin 1 isoform 3 [Homo sapiens]
Length = 1253
Score = 35.0 bits (79), Expect = 0.15
Identities = 42/192 (21%), Positives = 82/192 (42%), Gaps = 20/192 (10%)
Query: 14 GLHSVAEGVRLSPEPGREGVRDLAGAEEFGGGEEGTGLTGIKEIGDGEEGSGQRPEEIPM 73
G + A+ +L P GV G G +G G+ P + P+
Sbjct: 121 GTDTTAKTSKLPTRPASTGV---------AGASSSLGPSGSASAGELSSSEPSTPAQTPL 171
Query: 74 DLTVVKQEIIDWPGTEGRLAGQWVEQEVEDRPEVKDENAGVLEVKQETDSSLVVKEAKVG 133
++ ++ PG L E+E R +V+D LE K ET L E K
Sbjct: 172 AAPIIPTPVLTSPGAVPPLPSPSKEEE-GLRAQVRD-----LEEKLET-LRLKRAEDKAK 224
Query: 134 EPEVKEEKVKGE-VMDW-SEVKEEKDNLE--IKQEEKFVGQCIKEELMHGECVKEEKDFL 189
E+++ K++ E V +W S+++E++ +L+ +K+ K + ++ + + E + + D +
Sbjct: 225 LKELEKHKIQLEQVQEWKSKMQEQQADLQRRLKEARKEAKEALEAKERYMEEMADTADAI 284
Query: 190 KKEIVDDTKVKE 201
+ +D +E
Sbjct: 285 EMATLDKEMAEE 296
>gi|13259508 dynactin 1 isoform 2 [Homo sapiens]
Length = 1144
Score = 35.0 bits (79), Expect = 0.15
Identities = 41/180 (22%), Positives = 80/180 (44%), Gaps = 17/180 (9%)
Query: 26 PEPGREGVRDLAGAEEFGGGEEGTGLTGIKEIGDGEEGSGQRPEEIPMDLTVVKQEIIDW 85
P+P R +AGA G +G G+ P + P+ ++ ++
Sbjct: 16 PKPTRPASTGVAGASS------SLGPSGSASAGELSSSEPSTPAQTPLAAPIIPTPVLTS 69
Query: 86 PGTEGRLAGQWVEQEVEDRPEVKDENAGVLEVKQETDSSLVVKEAKVGEPEVKEEKVKGE 145
PG L E+E R +V+D LE K ET L E K E+++ K++ E
Sbjct: 70 PGAVPPLPSPSKEEE-GLRAQVRD-----LEEKLET-LRLKRAEDKAKLKELEKHKIQLE 122
Query: 146 -VMDW-SEVKEEKDNLE--IKQEEKFVGQCIKEELMHGECVKEEKDFLKKEIVDDTKVKE 201
V +W S+++E++ +L+ +K+ K + ++ + + E + + D ++ +D +E
Sbjct: 123 QVQEWKSKMQEQQADLQRRLKEARKEAKEALEAKERYMEEMADTADAIEMATLDKEMAEE 182
>gi|13259510 dynactin 1 isoform 1 [Homo sapiens]
Length = 1278
Score = 35.0 bits (79), Expect = 0.15
Identities = 41/180 (22%), Positives = 80/180 (44%), Gaps = 17/180 (9%)
Query: 26 PEPGREGVRDLAGAEEFGGGEEGTGLTGIKEIGDGEEGSGQRPEEIPMDLTVVKQEIIDW 85
P+P R +AGA G +G G+ P + P+ ++ ++
Sbjct: 150 PKPTRPASTGVAGASS------SLGPSGSASAGELSSSEPSTPAQTPLAAPIIPTPVLTS 203
Query: 86 PGTEGRLAGQWVEQEVEDRPEVKDENAGVLEVKQETDSSLVVKEAKVGEPEVKEEKVKGE 145
PG L E+E R +V+D LE K ET L E K E+++ K++ E
Sbjct: 204 PGAVPPLPSPSKEEE-GLRAQVRD-----LEEKLET-LRLKRAEDKAKLKELEKHKIQLE 256
Query: 146 -VMDW-SEVKEEKDNLE--IKQEEKFVGQCIKEELMHGECVKEEKDFLKKEIVDDTKVKE 201
V +W S+++E++ +L+ +K+ K + ++ + + E + + D ++ +D +E
Sbjct: 257 QVQEWKSKMQEQQADLQRRLKEARKEAKEALEAKERYMEEMADTADAIEMATLDKEMAEE 316
>gi|5453880 acidic (leucine-rich) nuclear phosphoprotein 32 family,
member A [Homo sapiens]
Length = 249
Score = 35.0 bits (79), Expect = 0.15
Identities = 30/87 (34%), Positives = 46/87 (52%), Gaps = 7/87 (8%)
Query: 89 EGRLAGQWVEQEVEDRPEVKDENAGVLEVKQETDSSLVVKEAKVGEPEVKEEKVKGEVMD 148
EG + G E+E ED E DE+A V+E +++ D +E V E ++E E +
Sbjct: 161 EGYVEGLDDEEEDEDEEEY-DEDAQVVEDEEDEDEEEEGEEEDVSGEEEEDE----EGYN 215
Query: 149 WSEVKEEKDNLEIKQEEKFVGQCIKEE 175
EV +E+D E+ +EE+ GQ K E
Sbjct: 216 DGEVDDEEDEEELGEEER--GQKRKRE 240
>gi|95147555 microtubule-associated protein 1A [Homo sapiens]
Length = 2803
Score = 35.0 bits (79), Expect = 0.15
Identities = 42/164 (25%), Positives = 77/164 (46%), Gaps = 17/164 (10%)
Query: 36 LAGAEEFGGGEEGTGL--TGIKEIGDGEEGSGQRPEEIPMDLTVVKQEIIDWPGTEGR-- 91
+A ++ G T L + IK+ D +E S + + + ++E+++ E R
Sbjct: 293 VATQKDLASGAVPTNLKPSKIKQRADSKE-SLKATTKTAVSKLAKREEVVEEGAKEARSE 351
Query: 92 LAGQWVEQEV---EDRPEVKDENAGVLEVKQETDSSLVVKEAKVGEPEVKEEKVKGEVMD 148
LA + + E E + ++ A VK E+ +L ++ K+ + +V ++ +K ++
Sbjct: 352 LAKELAKTEKKAKESSEKPPEKPAKPERVKTESSEALKAEKRKLIKDKVGKKHLKEKISK 411
Query: 149 WSEVKEEKDNLEIKQEEKFVGQCIKEELMHGECVKEEKDFLKKE 192
E K++K+ EIK+E K EL E KEEK KKE
Sbjct: 412 LEE-KKDKEKKEIKKERK--------ELKKDEGRKEEKKDAKKE 446
>gi|82830424 gon-4-like isoform a [Homo sapiens]
Length = 2240
Score = 35.0 bits (79), Expect = 0.15
Identities = 43/199 (21%), Positives = 79/199 (39%), Gaps = 31/199 (15%)
Query: 7 NEGKSGGGLHSVAEGVRLSPEPGREGVRDLAGAEEFGGGEEGTGLTGIKEIGDGEEGSGQ 66
N+G S L S+ VRLS PG+ + G GT + E G + G +
Sbjct: 1407 NKGSSKNALSSMDPEVRLSSPPGKP-----EDSSSVDGQSVGTPVG--PETGGEKNGPEE 1459
Query: 67 RPEEIPMDLTVVKQEIIDWPGTEGRLAGQWVEQEVEDRPEVKDENAGVLEVKQETDSSLV 126
EE DLT +++ + E L+ +++ +E + E + QE +S
Sbjct: 1460 EEEEDFDDLTQDEEDEMSSASEESVLSVPELQETMEKLTWLASER----RMSQEGESEEE 1515
Query: 127 VKEAKVGEPEVKEEKVKGEVMDWSEVKEEKDNLE-IKQEEKFVGQCIKEELMHGECVKEE 185
+ + EPE +EE EE + +E +++E++ + + G+ ++
Sbjct: 1516 NSQEENSEPEEEEE-------------EEAEGMESLQKEDEMTDEAV------GDSAEKP 1556
Query: 186 KDFLKKEIVDDTKVKEEPP 204
F E + + PP
Sbjct: 1557 PTFASPETAPEVETSRTPP 1575
>gi|58530840 desmoplakin isoform I [Homo sapiens]
Length = 2871
Score = 34.7 bits (78), Expect = 0.19
Identities = 26/112 (23%), Positives = 58/112 (51%), Gaps = 6/112 (5%)
Query: 95 QWVEQEVEDRPEVKDENAGVLEVKQETDSSLVVKEAKVGEPEVKEEKVKGEVMDWSEVKE 154
Q +++E DR ++DENA + V+ + + + + +V+E+++ +D+ V +
Sbjct: 1488 QLIDKETNDRKCLEDENARLQRVQYDLQKANSSATETINKLKVQEQELTRLRIDYERVSQ 1547
Query: 155 EKDNLEIKQEEKFVGQCIKEELMHGECVKEEKDFLKKEIVDDT----KVKEE 202
E+ + Q+ +KE + + V+EE + LK+ +D+ K++EE
Sbjct: 1548 ERTVKD--QDITRFQNSLKELQLQKQKVEEELNRLKRTASEDSCKRKKLEEE 1597
>gi|44680105 caldesmon 1 isoform 1 [Homo sapiens]
Length = 793
Score = 34.7 bits (78), Expect = 0.19
Identities = 28/108 (25%), Positives = 59/108 (54%), Gaps = 9/108 (8%)
Query: 100 EVEDRPEVKDENAGVLEVKQETDSSLVVKEAKVGEPEVKEEKVKGEVMD-W-SEVKEEKD 157
E R ++E +E +Q+ + L K+ + E ++K EKV+ ++ W +E K ++D
Sbjct: 368 EERQRARAEEEEKAKVE-EQKRNKQLEEKKHAMQETKIKGEKVEQKIEGKWVNEKKAQED 426
Query: 158 NLE---IKQEEKFVGQCIKEELMHGECVKEEKDFLKKEIVDDTKVKEE 202
L+ +K++ + G ++ + E ++E+K KKE + D K+K++
Sbjct: 427 KLQTAVLKKQGEEKGTKVQAKR---EKLQEDKPTFKKEEIKDEKIKKD 471
>gi|114205399 cyclic nucleotide gated channel beta 1 isoform a [Homo
sapiens]
Length = 1251
Score = 33.9 bits (76), Expect = 0.33
Identities = 35/124 (28%), Positives = 50/124 (40%), Gaps = 20/124 (16%)
Query: 34 RDLAGAEEFGGGEEGTGLTGIKEIGDGEEGSGQRPEEIPMDLTVVKQEIIDWPGTEGRLA 93
R+L+ EE EE +E + EE + E+ +D VV Q
Sbjct: 345 RELSRIEEEKEDEE-------EEEEEEEEEEEEEVTEVLLDSCVVSQ------------V 385
Query: 94 GQWVEQEVEDRPEVKDENAGVLEVKQETDSSLVVKEAKVGEPEVKEEKVKGEVMDWSEVK 153
G +E RP+ + EV +E K AK EV EE+ + E DW+E K
Sbjct: 386 GVGQSEEDGTRPQSTSDQKLWEEVGEEAKKEAEEK-AKEEAEEVAEEEAEKEPQDWAETK 444
Query: 154 EEKD 157
EE +
Sbjct: 445 EEPE 448
>gi|225579095 S-phase cyclin A-associated protein in the ER isoform
b [Homo sapiens]
Length = 1154
Score = 33.9 bits (76), Expect = 0.33
Identities = 29/107 (27%), Positives = 52/107 (48%), Gaps = 13/107 (12%)
Query: 95 QWVEQEVEDRPEVKDENAGVLEVKQETDSSLVVKEAKVGEPEVKE---------EKVKGE 145
+W E+ ++ R + +E E K+E +VK+A+ E +V E + + +
Sbjct: 335 KWKEELLDQRRRMMEEKLLHAEFKREVQLQAIVKKAQEEEAKVNEIAFINTLEAQNKRHD 394
Query: 146 VMDWSEVKEEKDNLEIKQEEKFVGQCIKEELMHGECVKEEKDFLKKE 192
V+ S++KE + L QEE+ Q +E+ E V+E K L+ E
Sbjct: 395 VL--SKLKEYEQRLNELQEERQRRQ--EEKQARDEAVQERKRALEAE 437
>gi|134304846 Rb1-inducible coiled coil protein 1 isoform 2 [Homo
sapiens]
Length = 1591
Score = 33.9 bits (76), Expect = 0.33
Identities = 32/122 (26%), Positives = 58/122 (47%), Gaps = 9/122 (7%)
Query: 114 VLEVKQETDSSL--VVKEAKVGEPEVKEEKVKGEVMDWSEVKEEKDN-LEIKQEEKFVGQ 170
+L +K E + L ++KE + E ++K K+KGE++ EV + KDN + + EK
Sbjct: 867 LLSLKNEYEGKLDGLIKETEENENKIK--KLKGELVCLEEVLQNKDNEFALVKHEKEAVI 924
Query: 171 CIKEE----LMHGECVKEEKDFLKKEIVDDTKVKEEPPINHPVGCKRKLAMSRCETCGTE 226
C++ E L+ E + ++ KE+ ++ E V KL + R E E
Sbjct: 925 CLQNEKDQKLLEMENIMHSQNCEIKELKQSREIVLEDLKKLHVENDEKLQLLRAELQSLE 984
Query: 227 EA 228
++
Sbjct: 985 QS 986
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.313 0.134 0.386
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,966,690
Number of Sequences: 37866
Number of extensions: 979581
Number of successful extensions: 4026
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 176
Number of HSP's that attempted gapping in prelim test: 3628
Number of HSP's gapped (non-prelim): 441
length of query: 470
length of database: 18,247,518
effective HSP length: 106
effective length of query: 364
effective length of database: 14,233,722
effective search space: 5181074808
effective search space used: 5181074808
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.