Search of human proteins with 20149543

Search of human proteins with 20149543

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|20149543 placental growth factor, vascular endothelial
growth factor-related protein [Homo sapiens]
         (170 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|20149543 placental growth factor, vascular endothelial growth...   359   e-100
gi|76781482 vascular endothelial growth factor A isoform c precu...   144   3e-35
gi|76781481 vascular endothelial growth factor A isoform b precu...   141   3e-34
gi|76781480 vascular endothelial growth factor A isoform a precu...   140   7e-34
gi|76781484 vascular endothelial growth factor A isoform e precu...   130   7e-31
gi|76781483 vascular endothelial growth factor A isoform d precu...   130   7e-31
gi|76781487 vascular endothelial growth factor A isoform g precu...   130   7e-31
gi|76781485 vascular endothelial growth factor A isoform f precu...   129   2e-30
gi|4507887 vascular endothelial growth factor B [Homo sapiens]         77   9e-15
gi|4758378 vascular endothelial growth factor D preproprotein [H...    65   2e-11
gi|4885653 vascular endothelial growth factor C preproprotein [H...    61   4e-10
gi|77695917 platelet-derived growth factor alpha isoform 1 prepr...    53   1e-07
gi|15451786 platelet-derived growth factor beta isoform 2 prepro...    46   1e-05
gi|4505681 platelet-derived growth factor beta isoform 1 preprop...    46   1e-05
gi|15208656 platelet-derived growth factor alpha isoform 2 prepr...    45   3e-05
gi|19913358 Wolf-Hirschhorn syndrome candidate 1 protein isoform...    33   0.15 
gi|19913350 Wolf-Hirschhorn syndrome candidate 1 protein isoform...    33   0.15 
gi|19913348 Wolf-Hirschhorn syndrome candidate 1 protein isoform...    33   0.15 
gi|109633019 Wolf-Hirschhorn syndrome candidate 1 protein isofor...    33   0.15 
gi|27477095 nuclear receptor binding SET domain protein 1 isofor...    32   0.34 
gi|19923586 nuclear receptor binding SET domain protein 1 isofor...    32   0.34 
gi|9994187 platelet-derived growth factor C precursor [Homo sapi...    31   0.45 
gi|46519147 ankyrin repeat and KH domain containing 1 isoform 1 ...    29   1.7  
gi|37620163 ANKHD1-EIF4EBP3 protein [Homo sapiens]                     29   1.7  
gi|42716289 erythrocyte membrane protein band 4.1 (elliptocytosi...    29   2.2  
gi|51477723 testis expressed sequence 11 isoform 2 [Homo sapiens]      28   2.9  
gi|51477721 testis expressed sequence 11 isoform 1 [Homo sapiens]      28   2.9  
gi|239749449 PREDICTED: hypothetical protein [Homo sapiens]            28   3.8  
gi|28558969 mediator complex subunit 23 isoform b [Homo sapiens]       28   5.0  
gi|28558971 mediator complex subunit 23 isoform a [Homo sapiens]       28   5.0  

>gi|20149543 placental growth factor, vascular endothelial growth
           factor-related protein [Homo sapiens]
          Length = 170

 Score =  359 bits (922), Expect = e-100
 Identities = 170/170 (100%), Positives = 170/170 (100%)

Query: 1   MPVMRLFPCFLQLLAGLALPAVPPQQWALSAGNGSSEVEVVPFQEVWGRSYCRALERLVD 60
           MPVMRLFPCFLQLLAGLALPAVPPQQWALSAGNGSSEVEVVPFQEVWGRSYCRALERLVD
Sbjct: 1   MPVMRLFPCFLQLLAGLALPAVPPQQWALSAGNGSSEVEVVPFQEVWGRSYCRALERLVD 60

Query: 61  VVSEYPSEVEHMFSPSCVSLLRCTGCCGDENLHCVPVETANVTMQLLKIRSGDRPSYVEL 120
           VVSEYPSEVEHMFSPSCVSLLRCTGCCGDENLHCVPVETANVTMQLLKIRSGDRPSYVEL
Sbjct: 61  VVSEYPSEVEHMFSPSCVSLLRCTGCCGDENLHCVPVETANVTMQLLKIRSGDRPSYVEL 120

Query: 121 TFSQHVRCECRPLREKMKPERRRPKGRGKRRREKQRPTDCHLCGDAVPRR 170
           TFSQHVRCECRPLREKMKPERRRPKGRGKRRREKQRPTDCHLCGDAVPRR
Sbjct: 121 TFSQHVRCECRPLREKMKPERRRPKGRGKRRREKQRPTDCHLCGDAVPRR 170


>gi|76781482 vascular endothelial growth factor A isoform c
           precursor [Homo sapiens]
          Length = 389

 Score =  144 bits (364), Expect = 3e-35
 Identities = 65/145 (44%), Positives = 95/145 (65%), Gaps = 8/145 (5%)

Query: 29  LSAGNGSSEVEVVPFQEVWGRSYCRALERLVDVVSEYPSEVEHMFSPSCVSLLRCTGCCG 88
           ++ G G +  EVV F +V+ RSYC  +E LVD+  EYP E+E++F PSCV L+RC GCC 
Sbjct: 209 MAEGGGQNHHEVVKFMDVYQRSYCHPIETLVDIFQEYPDEIEYIFKPSCVPLMRCGGCCN 268

Query: 89  DENLHCVPVETANVTMQLLKIRSGDRPSYVELTFSQHVRCECRPLREKMKPERRRPKGRG 148
           DE L CVP E +N+TMQ+++I+        E++F QH +CECRP +++ + E++  +G+G
Sbjct: 269 DEGLECVPTEESNITMQIMRIKPHQGQHIGEMSFLQHNKCECRPKKDRARQEKKSVRGKG 328

Query: 149 ---KRRREKQRPTDCHLCGDAVPRR 170
              KR+R+K RP     CG    RR
Sbjct: 329 KGQKRKRKKSRP-----CGPCSERR 348


>gi|76781481 vascular endothelial growth factor A isoform b
           precursor [Homo sapiens]
          Length = 395

 Score =  141 bits (355), Expect = 3e-34
 Identities = 64/146 (43%), Positives = 95/146 (65%), Gaps = 4/146 (2%)

Query: 29  LSAGNGSSEVEVVPFQEVWGRSYCRALERLVDVVSEYPSEVEHMFSPSCVSLLRCTGCCG 88
           ++ G G +  EVV F +V+ RSYC  +E LVD+  EYP E+E++F PSCV L+RC GCC 
Sbjct: 209 MAEGGGQNHHEVVKFMDVYQRSYCHPIETLVDIFQEYPDEIEYIFKPSCVPLMRCGGCCN 268

Query: 89  DENLHCVPVETANVTMQLLKIRSGDRPSYVELTFSQHVRCECRPLREKMKPERRRPKGRG 148
           DE L CVP E +N+TMQ+++I+        E++F QH +CECRP +++ + E++  +G+G
Sbjct: 269 DEGLECVPTEESNITMQIMRIKPHQGQHIGEMSFLQHNKCECRPKKDRARQEKKSVRGKG 328

Query: 149 ---KRRREKQRPTDCHL-CGDAVPRR 170
              KR+R+K R     + CG    RR
Sbjct: 329 KGQKRKRKKSRYKSWSVPCGPCSERR 354


>gi|76781480 vascular endothelial growth factor A isoform a
           precursor [Homo sapiens]
          Length = 412

 Score =  140 bits (352), Expect = 7e-34
 Identities = 57/128 (44%), Positives = 89/128 (69%)

Query: 29  LSAGNGSSEVEVVPFQEVWGRSYCRALERLVDVVSEYPSEVEHMFSPSCVSLLRCTGCCG 88
           ++ G G +  EVV F +V+ RSYC  +E LVD+  EYP E+E++F PSCV L+RC GCC 
Sbjct: 209 MAEGGGQNHHEVVKFMDVYQRSYCHPIETLVDIFQEYPDEIEYIFKPSCVPLMRCGGCCN 268

Query: 89  DENLHCVPVETANVTMQLLKIRSGDRPSYVELTFSQHVRCECRPLREKMKPERRRPKGRG 148
           DE L CVP E +N+TMQ+++I+        E++F QH +CECRP +++ + E++  +G+G
Sbjct: 269 DEGLECVPTEESNITMQIMRIKPHQGQHIGEMSFLQHNKCECRPKKDRARQEKKSVRGKG 328

Query: 149 KRRREKQR 156
           K ++ K++
Sbjct: 329 KGQKRKRK 336


>gi|76781484 vascular endothelial growth factor A isoform e
           precursor [Homo sapiens]
          Length = 354

 Score =  130 bits (326), Expect = 7e-31
 Identities = 60/135 (44%), Positives = 85/135 (62%), Gaps = 5/135 (3%)

Query: 29  LSAGNGSSEVEVVPFQEVWGRSYCRALERLVDVVSEYPSEVEHMFSPSCVSLLRCTGCCG 88
           ++ G G +  EVV F +V+ RSYC  +E LVD+  EYP E+E++F PSCV L+RC GCC 
Sbjct: 209 MAEGGGQNHHEVVKFMDVYQRSYCHPIETLVDIFQEYPDEIEYIFKPSCVPLMRCGGCCN 268

Query: 89  DENLHCVPVETANVTMQLLKIRSGDRPSYVELTFSQHVRCECRPLREKMKPERRRPKGRG 148
           DE L CVP E +N+TMQ+++I+        E++F QH +CECRP +++ + E   P G  
Sbjct: 269 DEGLECVPTEESNITMQIMRIKPHQGQHIGEMSFLQHNKCECRPKKDRARQE--NPCGPC 326

Query: 149 KRRREK---QRPTDC 160
             RR+    Q P  C
Sbjct: 327 SERRKHLFVQDPQTC 341


>gi|76781483 vascular endothelial growth factor A isoform d
           precursor [Homo sapiens]
          Length = 371

 Score =  130 bits (326), Expect = 7e-31
 Identities = 60/135 (44%), Positives = 85/135 (62%), Gaps = 5/135 (3%)

Query: 29  LSAGNGSSEVEVVPFQEVWGRSYCRALERLVDVVSEYPSEVEHMFSPSCVSLLRCTGCCG 88
           ++ G G +  EVV F +V+ RSYC  +E LVD+  EYP E+E++F PSCV L+RC GCC 
Sbjct: 209 MAEGGGQNHHEVVKFMDVYQRSYCHPIETLVDIFQEYPDEIEYIFKPSCVPLMRCGGCCN 268

Query: 89  DENLHCVPVETANVTMQLLKIRSGDRPSYVELTFSQHVRCECRPLREKMKPERRRPKGRG 148
           DE L CVP E +N+TMQ+++I+        E++F QH +CECRP +++ + E   P G  
Sbjct: 269 DEGLECVPTEESNITMQIMRIKPHQGQHIGEMSFLQHNKCECRPKKDRARQE--NPCGPC 326

Query: 149 KRRREK---QRPTDC 160
             RR+    Q P  C
Sbjct: 327 SERRKHLFVQDPQTC 341


>gi|76781487 vascular endothelial growth factor A isoform g
           precursor [Homo sapiens]
          Length = 371

 Score =  130 bits (326), Expect = 7e-31
 Identities = 60/135 (44%), Positives = 85/135 (62%), Gaps = 5/135 (3%)

Query: 29  LSAGNGSSEVEVVPFQEVWGRSYCRALERLVDVVSEYPSEVEHMFSPSCVSLLRCTGCCG 88
           ++ G G +  EVV F +V+ RSYC  +E LVD+  EYP E+E++F PSCV L+RC GCC 
Sbjct: 209 MAEGGGQNHHEVVKFMDVYQRSYCHPIETLVDIFQEYPDEIEYIFKPSCVPLMRCGGCCN 268

Query: 89  DENLHCVPVETANVTMQLLKIRSGDRPSYVELTFSQHVRCECRPLREKMKPERRRPKGRG 148
           DE L CVP E +N+TMQ+++I+        E++F QH +CECRP +++ + E   P G  
Sbjct: 269 DEGLECVPTEESNITMQIMRIKPHQGQHIGEMSFLQHNKCECRPKKDRARQE--NPCGPC 326

Query: 149 KRRREK---QRPTDC 160
             RR+    Q P  C
Sbjct: 327 SERRKHLFVQDPQTC 341


>gi|76781485 vascular endothelial growth factor A isoform f
           precursor [Homo sapiens]
          Length = 327

 Score =  129 bits (323), Expect = 2e-30
 Identities = 53/113 (46%), Positives = 78/113 (69%)

Query: 29  LSAGNGSSEVEVVPFQEVWGRSYCRALERLVDVVSEYPSEVEHMFSPSCVSLLRCTGCCG 88
           ++ G G +  EVV F +V+ RSYC  +E LVD+  EYP E+E++F PSCV L+RC GCC 
Sbjct: 209 MAEGGGQNHHEVVKFMDVYQRSYCHPIETLVDIFQEYPDEIEYIFKPSCVPLMRCGGCCN 268

Query: 89  DENLHCVPVETANVTMQLLKIRSGDRPSYVELTFSQHVRCECRPLREKMKPER 141
           DE L CVP E +N+TMQ+++I+        E++F QH +CECRP +++ + E+
Sbjct: 269 DEGLECVPTEESNITMQIMRIKPHQGQHIGEMSFLQHNKCECRPKKDRARQEK 321


>gi|4507887 vascular endothelial growth factor B [Homo sapiens]
          Length = 207

 Score = 76.6 bits (187), Expect = 9e-15
 Identities = 45/136 (33%), Positives = 67/136 (49%), Gaps = 3/136 (2%)

Query: 8   PCFLQLLAGLALPAVPPQQWALSAGNGSSEVEVVPFQEVWGRSYCRALERLVDVVSEYPS 67
           P   +LL    L   P Q           + +VV + +V+ R+ C+  E +V +  E   
Sbjct: 3   PLLRRLLLAALLQLAPAQAPVSQPDAPGHQRKVVSWIDVYTRATCQPREVVVPLTVELMG 62

Query: 68  EVEHMFSPSCVSLLRCTGCCGDENLHCVPVETANVTMQLLKIRSGDRPSYVELTFSQHVR 127
            V     PSCV++ RC GCC D+ L CVP     V MQ+L IR        E++  +H +
Sbjct: 63  TVAKQLVPSCVTVQRCGGCCPDDGLECVPTGQHQVRMQILMIRY-PSSQLGEMSLEEHSQ 121

Query: 128 CECRPLRE--KMKPER 141
           CECRP ++   +KP+R
Sbjct: 122 CECRPKKKDSAVKPDR 137


>gi|4758378 vascular endothelial growth factor D preproprotein [Homo
           sapiens]
          Length = 354

 Score = 65.5 bits (158), Expect = 2e-11
 Identities = 31/90 (34%), Positives = 45/90 (50%), Gaps = 2/90 (2%)

Query: 45  EVWGRSYCRALERLVDVVSEYPSEVEHMFSPSCVSLLRCTGCCGDENLHCVPVETANVTM 104
           E W R+ C   E  V+V SE        F P CV++ RC GCC +E+L C+   T+ ++ 
Sbjct: 104 EEWQRTQCSPRETCVEVASELGKSTNTFFKPPCVNVFRCGGCCNEESLICMNTSTSYISK 163

Query: 105 QLLKIR--SGDRPSYVELTFSQHVRCECRP 132
           QL +I       P  V +  + H  C+C P
Sbjct: 164 QLFEISVPLTSVPELVPVKVANHTGCKCLP 193


>gi|4885653 vascular endothelial growth factor C preproprotein [Homo
           sapiens]
          Length = 419

 Score = 61.2 bits (147), Expect = 4e-10
 Identities = 28/86 (32%), Positives = 41/86 (47%), Gaps = 2/86 (2%)

Query: 47  WGRSYCRALERLVDVVSEYPSEVEHMFSPSCVSLLRCTGCCGDENLHCVPVETANVTMQL 106
           W ++ C   E  +DV  E+       F P CVS+ RC GCC  E L C+   T+ ++  L
Sbjct: 126 WRKTQCMPREVCIDVGKEFGVATNTFFKPPCVSVYRCGGCCNSEGLQCMNTSTSYLSKTL 185

Query: 107 LKIR--SGDRPSYVELTFSQHVRCEC 130
            +I       P  V ++F+ H  C C
Sbjct: 186 FEITVPLSQGPKPVTISFANHTSCRC 211


>gi|77695917 platelet-derived growth factor alpha isoform 1
           preproprotein [Homo sapiens]
          Length = 211

 Score = 53.1 bits (126), Expect = 1e-07
 Identities = 28/102 (27%), Positives = 51/102 (50%), Gaps = 11/102 (10%)

Query: 66  PSEVEHMFSPSCVSLLRCTGCCGDENLHCVPVETANVTMQLLK---IRSGDRPSYVELTF 122
           P+    +  P CV + RCTGCC   ++ C P    + ++++ K   +R   +   V++  
Sbjct: 112 PTSANFLIWPPCVEVKRCTGCCNTSSVKCQPSRVHHRSVKVAKVEYVRKKPKLKEVQVRL 171

Query: 123 SQHVRCECRPLREKMKPERR-----RPKGRGKRRREKQ-RPT 158
            +H+ C C      + P+ R     RP+  GK+R+ K+ +PT
Sbjct: 172 EEHLECAC--ATTSLNPDYREEDTGRPRESGKKRKRKRLKPT 211


>gi|15451786 platelet-derived growth factor beta isoform 2
           preproprotein [Homo sapiens]
          Length = 226

 Score = 46.2 bits (108), Expect = 1e-05
 Identities = 24/80 (30%), Positives = 40/80 (50%), Gaps = 4/80 (5%)

Query: 75  PSCVSLLRCTGCCGDENLHCVPVETANVTMQLLKIR-SGDRPSY--VELTFSQHVRCECR 131
           P CV + RC+GCC + N+ C P +     +Q+ KI     +P +    +T   H+ C+C 
Sbjct: 107 PPCVEVQRCSGCCNNRNVQCRPTQVQLRPVQVRKIEIVRKKPIFKKATVTLEDHLACKCE 166

Query: 132 PLREKMKPERRRPKGRGKRR 151
            +    +P  R P G  ++R
Sbjct: 167 TV-AAARPVTRSPGGSQEQR 185


>gi|4505681 platelet-derived growth factor beta isoform 1
           preproprotein [Homo sapiens]
          Length = 241

 Score = 46.2 bits (108), Expect = 1e-05
 Identities = 24/80 (30%), Positives = 40/80 (50%), Gaps = 4/80 (5%)

Query: 75  PSCVSLLRCTGCCGDENLHCVPVETANVTMQLLKIR-SGDRPSY--VELTFSQHVRCECR 131
           P CV + RC+GCC + N+ C P +     +Q+ KI     +P +    +T   H+ C+C 
Sbjct: 122 PPCVEVQRCSGCCNNRNVQCRPTQVQLRPVQVRKIEIVRKKPIFKKATVTLEDHLACKCE 181

Query: 132 PLREKMKPERRRPKGRGKRR 151
            +    +P  R P G  ++R
Sbjct: 182 TV-AAARPVTRSPGGSQEQR 200


>gi|15208656 platelet-derived growth factor alpha isoform 2
           preproprotein [Homo sapiens]
          Length = 196

 Score = 45.1 bits (105), Expect = 3e-05
 Identities = 18/68 (26%), Positives = 34/68 (50%), Gaps = 3/68 (4%)

Query: 66  PSEVEHMFSPSCVSLLRCTGCCGDENLHCVPVETANVTMQLLK---IRSGDRPSYVELTF 122
           P+    +  P CV + RCTGCC   ++ C P    + ++++ K   +R   +   V++  
Sbjct: 112 PTSANFLIWPPCVEVKRCTGCCNTSSVKCQPSRVHHRSVKVAKVEYVRKKPKLKEVQVRL 171

Query: 123 SQHVRCEC 130
            +H+ C C
Sbjct: 172 EEHLECAC 179


>gi|19913358 Wolf-Hirschhorn syndrome candidate 1 protein isoform 1
            [Homo sapiens]
          Length = 1365

 Score = 32.7 bits (73), Expect = 0.15
 Identities = 21/54 (38%), Positives = 26/54 (48%), Gaps = 9/54 (16%)

Query: 112  GDRPSYVELTFSQHVRCECRPLREKMKPERRRPKGRGKRRREKQRPTDCHLCGD 165
            GDRP       S  +  E +  + K K  RRR KG GKR+ E     +C  CGD
Sbjct: 1203 GDRPKT-----STTLSSEEKGKKTKKKTRRRRAKGEGKRQSE----DECFRCGD 1247



 Score = 26.9 bits (58), Expect = 8.5
 Identities = 12/25 (48%), Positives = 17/25 (68%)

Query: 135  EKMKPERRRPKGRGKRRREKQRPTD 159
            EK  PE  +PKG+ +RRR  +R T+
Sbjct: 1339 EKPPPEPGKPKGKRRRRRGWRRVTE 1363


>gi|19913350 Wolf-Hirschhorn syndrome candidate 1 protein isoform 1
            [Homo sapiens]
          Length = 1365

 Score = 32.7 bits (73), Expect = 0.15
 Identities = 21/54 (38%), Positives = 26/54 (48%), Gaps = 9/54 (16%)

Query: 112  GDRPSYVELTFSQHVRCECRPLREKMKPERRRPKGRGKRRREKQRPTDCHLCGD 165
            GDRP       S  +  E +  + K K  RRR KG GKR+ E     +C  CGD
Sbjct: 1203 GDRPKT-----STTLSSEEKGKKTKKKTRRRRAKGEGKRQSE----DECFRCGD 1247



 Score = 26.9 bits (58), Expect = 8.5
 Identities = 12/25 (48%), Positives = 17/25 (68%)

Query: 135  EKMKPERRRPKGRGKRRREKQRPTD 159
            EK  PE  +PKG+ +RRR  +R T+
Sbjct: 1339 EKPPPEPGKPKGKRRRRRGWRRVTE 1363


>gi|19913348 Wolf-Hirschhorn syndrome candidate 1 protein isoform 1
            [Homo sapiens]
          Length = 1365

 Score = 32.7 bits (73), Expect = 0.15
 Identities = 21/54 (38%), Positives = 26/54 (48%), Gaps = 9/54 (16%)

Query: 112  GDRPSYVELTFSQHVRCECRPLREKMKPERRRPKGRGKRRREKQRPTDCHLCGD 165
            GDRP       S  +  E +  + K K  RRR KG GKR+ E     +C  CGD
Sbjct: 1203 GDRPKT-----STTLSSEEKGKKTKKKTRRRRAKGEGKRQSE----DECFRCGD 1247



 Score = 26.9 bits (58), Expect = 8.5
 Identities = 12/25 (48%), Positives = 17/25 (68%)

Query: 135  EKMKPERRRPKGRGKRRREKQRPTD 159
            EK  PE  +PKG+ +RRR  +R T+
Sbjct: 1339 EKPPPEPGKPKGKRRRRRGWRRVTE 1363


>gi|109633019 Wolf-Hirschhorn syndrome candidate 1 protein isoform 1
            [Homo sapiens]
          Length = 1365

 Score = 32.7 bits (73), Expect = 0.15
 Identities = 21/54 (38%), Positives = 26/54 (48%), Gaps = 9/54 (16%)

Query: 112  GDRPSYVELTFSQHVRCECRPLREKMKPERRRPKGRGKRRREKQRPTDCHLCGD 165
            GDRP       S  +  E +  + K K  RRR KG GKR+ E     +C  CGD
Sbjct: 1203 GDRPKT-----STTLSSEEKGKKTKKKTRRRRAKGEGKRQSE----DECFRCGD 1247



 Score = 26.9 bits (58), Expect = 8.5
 Identities = 12/25 (48%), Positives = 17/25 (68%)

Query: 135  EKMKPERRRPKGRGKRRREKQRPTD 159
            EK  PE  +PKG+ +RRR  +R T+
Sbjct: 1339 EKPPPEPGKPKGKRRRRRGWRRVTE 1363


>gi|27477095 nuclear receptor binding SET domain protein 1 isoform a
            [Homo sapiens]
          Length = 2427

 Score = 31.6 bits (70), Expect = 0.34
 Identities = 16/45 (35%), Positives = 27/45 (60%), Gaps = 4/45 (8%)

Query: 126  VRCECRPLREKMKPERRRPKGRGKRRRE----KQRPTDCHLCGDA 166
            VR + +P+  + K ++ + K +GKRR +    K+R  +C  CGDA
Sbjct: 1814 VRPKNQPIATEEKSKKFKKKQQGKRRTQGEITKEREDECFSCGDA 1858


>gi|19923586 nuclear receptor binding SET domain protein 1 isoform b
            [Homo sapiens]
          Length = 2696

 Score = 31.6 bits (70), Expect = 0.34
 Identities = 16/45 (35%), Positives = 27/45 (60%), Gaps = 4/45 (8%)

Query: 126  VRCECRPLREKMKPERRRPKGRGKRRRE----KQRPTDCHLCGDA 166
            VR + +P+  + K ++ + K +GKRR +    K+R  +C  CGDA
Sbjct: 2083 VRPKNQPIATEEKSKKFKKKQQGKRRTQGEITKEREDECFSCGDA 2127


>gi|9994187 platelet-derived growth factor C precursor [Homo
           sapiens]
          Length = 345

 Score = 31.2 bits (69), Expect = 0.45
 Identities = 19/79 (24%), Positives = 32/79 (40%), Gaps = 10/79 (12%)

Query: 62  VSEYPSEVEHMFSPSCVSLLRCTG---CC--GDENLHCVPVETANVTMQLLKIR-----S 111
           + E     + +F P C+ + RC G   CC        CVP +      ++L++R      
Sbjct: 259 IREELKRTDTIFWPGCLLVKRCGGNCACCLHNCNECQCVPSKVTKKYHEVLQLRPKTGVR 318

Query: 112 GDRPSYVELTFSQHVRCEC 130
           G   S  ++    H  C+C
Sbjct: 319 GLHKSLTDVALEHHEECDC 337


>gi|46519147 ankyrin repeat and KH domain containing 1 isoform 1 [Homo
            sapiens]
          Length = 2542

 Score = 29.3 bits (64), Expect = 1.7
 Identities = 23/125 (18%), Positives = 56/125 (44%), Gaps = 18/125 (14%)

Query: 39   EVVPFQEVWGRSYCRALERLVDVVSEYPSEVEHMFSPSCVS----LLRCTGCC-----GD 89
            ++ P    + + + + ++ LV  V+++PS++E M   + ++    L +C  C        
Sbjct: 1358 KITPLMSAFRKGHVKVVQYLVKEVNQFPSDIECMRYIATITDKELLKKCHQCVETIVKAK 1417

Query: 90   ENLHCVPVETANVTMQLLKIRSGDRPSYVELTFSQHVRCECRPLREKMKPERRRPKGRGK 149
            +       + A++ ++ L +      S  +   ++         REK K +R++ K   K
Sbjct: 1418 DQQAAEANKNASILLKELDLEKSREESRKQALAAK---------REKRKEKRKKKKEEQK 1468

Query: 150  RRREK 154
            R++E+
Sbjct: 1469 RKQEE 1473


>gi|37620163 ANKHD1-EIF4EBP3 protein [Homo sapiens]
          Length = 2617

 Score = 29.3 bits (64), Expect = 1.7
 Identities = 23/125 (18%), Positives = 56/125 (44%), Gaps = 18/125 (14%)

Query: 39   EVVPFQEVWGRSYCRALERLVDVVSEYPSEVEHMFSPSCVS----LLRCTGCC-----GD 89
            ++ P    + + + + ++ LV  V+++PS++E M   + ++    L +C  C        
Sbjct: 1358 KITPLMSAFRKGHVKVVQYLVKEVNQFPSDIECMRYIATITDKELLKKCHQCVETIVKAK 1417

Query: 90   ENLHCVPVETANVTMQLLKIRSGDRPSYVELTFSQHVRCECRPLREKMKPERRRPKGRGK 149
            +       + A++ ++ L +      S  +   ++         REK K +R++ K   K
Sbjct: 1418 DQQAAEANKNASILLKELDLEKSREESRKQALAAK---------REKRKEKRKKKKEEQK 1468

Query: 150  RRREK 154
            R++E+
Sbjct: 1469 RKQEE 1473


>gi|42716289 erythrocyte membrane protein band 4.1 (elliptocytosis
           1, RH-linked) isoform 1 [Homo sapiens]
          Length = 775

 Score = 28.9 bits (63), Expect = 2.2
 Identities = 18/62 (29%), Positives = 28/62 (45%)

Query: 98  ETANVTMQLLKIRSGDRPSYVELTFSQHVRCECRPLREKMKPERRRPKGRGKRRREKQRP 157
           E  N   Q LK  +GD P++ +LT ++    E R L        +RPK +      K+  
Sbjct: 44  EGDNWCEQKLKASNGDTPTHEDLTKNKERTSESRGLSRLFSSFLKRPKSQVSEEEGKEVE 103

Query: 158 TD 159
           +D
Sbjct: 104 SD 105


>gi|51477723 testis expressed sequence 11 isoform 2 [Homo sapiens]
          Length = 925

 Score = 28.5 bits (62), Expect = 2.9
 Identities = 11/20 (55%), Positives = 15/20 (75%)

Query: 29  LSAGNGSSEVEVVPFQEVWG 48
           LS  +G+S VE+ P +EVWG
Sbjct: 809 LSVPDGASNVELCPLEEVWG 828


>gi|51477721 testis expressed sequence 11 isoform 1 [Homo sapiens]
          Length = 940

 Score = 28.5 bits (62), Expect = 2.9
 Identities = 11/20 (55%), Positives = 15/20 (75%)

Query: 29  LSAGNGSSEVEVVPFQEVWG 48
           LS  +G+S VE+ P +EVWG
Sbjct: 824 LSVPDGASNVELCPLEEVWG 843


>gi|239749449 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 275

 Score = 28.1 bits (61), Expect = 3.8
 Identities = 12/28 (42%), Positives = 20/28 (71%)

Query: 129 ECRPLREKMKPERRRPKGRGKRRREKQR 156
           E +  RE+ + +RR+ K R +R+REK+R
Sbjct: 126 ENKQRRERKRKKRRKKKRRKERKREKER 153



 Score = 27.3 bits (59), Expect = 6.5
 Identities = 10/23 (43%), Positives = 18/23 (78%)

Query: 134 REKMKPERRRPKGRGKRRREKQR 156
           ++K + ER+R K RGKR R++++
Sbjct: 140 KKKRRKERKREKERGKRERKRKK 162


>gi|28558969 mediator complex subunit 23 isoform b [Homo sapiens]
          Length = 1365

 Score = 27.7 bits (60), Expect = 5.0
 Identities = 23/79 (29%), Positives = 30/79 (37%), Gaps = 25/79 (31%)

Query: 24   PQQWALS------AGNGSSEVEVVPFQEVWGRSYCRALERLVDVV--------------- 62
            PQ W LS      A N   E   VP        YCR + RLVD +               
Sbjct: 1045 PQGWCLSDTYLKCAMNAREENPWVPDDTY----YCRLIGRLVDTMAGKSPGPFPNCDWRF 1100

Query: 63   SEYPSEVEHMFSPSCVSLL 81
            +E+P+   H    +CV L+
Sbjct: 1101 NEFPNPAAHALHVTCVELM 1119


>gi|28558971 mediator complex subunit 23 isoform a [Homo sapiens]
          Length = 1368

 Score = 27.7 bits (60), Expect = 5.0
 Identities = 23/79 (29%), Positives = 30/79 (37%), Gaps = 25/79 (31%)

Query: 24   PQQWALS------AGNGSSEVEVVPFQEVWGRSYCRALERLVDVV--------------- 62
            PQ W LS      A N   E   VP        YCR + RLVD +               
Sbjct: 1039 PQGWCLSDTYLKCAMNAREENPWVPDDTY----YCRLIGRLVDTMAGKSPGPFPNCDWRF 1094

Query: 63   SEYPSEVEHMFSPSCVSLL 81
            +E+P+   H    +CV L+
Sbjct: 1095 NEFPNPAAHALHVTCVELM 1113


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.324    0.138    0.448 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,649,608
Number of Sequences: 37866
Number of extensions: 353483
Number of successful extensions: 2101
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 2047
Number of HSP's gapped (non-prelim): 66
length of query: 170
length of database: 18,247,518
effective HSP length: 95
effective length of query: 75
effective length of database: 14,650,248
effective search space: 1098768600
effective search space used: 1098768600
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.