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Search of human proteins with 20149540
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|20149540 lysyl oxidase preproprotein [Homo sapiens]
(417 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|20149540 lysyl oxidase preproprotein [Homo sapiens] 892 0.0
gi|67782346 lysyl oxidase-like 1 preproprotein [Homo sapiens] 357 8e-99
gi|14211943 lysyl oxidase-like 3 precursor [Homo sapiens] 226 3e-59
gi|67782349 lysyl oxidase-like 4 precursor [Homo sapiens] 221 7e-58
gi|4505011 lysyl oxidase-like 2 precursor [Homo sapiens] 221 1e-57
gi|45592959 LIM domain binding 3 isoform 1 [Homo sapiens] 39 0.009
gi|169165751 PREDICTED: hypothetical protein [Homo sapiens] 39 0.011
gi|169166086 PREDICTED: hypothetical protein [Homo sapiens] 39 0.011
gi|169165286 PREDICTED: hypothetical protein [Homo sapiens] 39 0.011
gi|239753839 PREDICTED: hypothetical protein [Homo sapiens] 38 0.019
gi|148237270 hypermethylated in cancer 1 isoform 2 [Homo sapiens] 37 0.033
gi|61676186 hypermethylated in cancer 1 isoform 1 [Homo sapiens] 37 0.033
gi|74271903 chondroitin sulfate synthase 3 [Homo sapiens] 37 0.043
gi|197333868 T-box 2 [Homo sapiens] 36 0.057
gi|122937251 lysine (K)-specific demethylase 6B [Homo sapiens] 35 0.13
gi|58761548 tau tubulin kinase 1 [Homo sapiens] 35 0.16
gi|33286446 opioid growth factor receptor [Homo sapiens] 34 0.28
gi|222352129 von Willebrand factor A domain containing 5B2 [Homo... 33 0.37
gi|55956910 meningioma 1 [Homo sapiens] 33 0.37
gi|224451032 KIAA1683 isoform a [Homo sapiens] 33 0.63
gi|52630419 sterol regulatory element binding transcription fact... 33 0.63
gi|22547195 sterol regulatory element binding transcription fact... 33 0.63
gi|239752201 PREDICTED: hypothetical protein XP_002348147 [Homo ... 33 0.63
gi|224451036 KIAA1683 isoform c [Homo sapiens] 33 0.63
gi|54606862 KIAA1683 isoform b [Homo sapiens] 33 0.63
gi|158534055 round spermatid basic protein 1-like [Homo sapiens] 33 0.63
gi|148596988 mucoepidermoid carcinoma translocated 1 isoform 3 [... 32 0.82
gi|148596965 mucoepidermoid carcinoma translocated 1 isoform 1 [... 32 0.82
gi|5174573 myeloid/lymphoid or mixed-lineage leukemia trithorax ... 32 0.82
gi|185135971 poly(A)-binding protein, cytoplasmic 1-like [Homo s... 32 1.1
>gi|20149540 lysyl oxidase preproprotein [Homo sapiens]
Length = 417
Score = 892 bits (2305), Expect = 0.0
Identities = 417/417 (100%), Positives = 417/417 (100%)
Query: 1 MRFAWTVLLLGPLQLCALVHCAPPAAGQQQPPREPPAAPGAWRQQIQWENNGQVFSLLSL 60
MRFAWTVLLLGPLQLCALVHCAPPAAGQQQPPREPPAAPGAWRQQIQWENNGQVFSLLSL
Sbjct: 1 MRFAWTVLLLGPLQLCALVHCAPPAAGQQQPPREPPAAPGAWRQQIQWENNGQVFSLLSL 60
Query: 61 GSQYQPQRRRDPGAAVPGAANASAQQPRTPILLIRDNRTAAARTRTAGSSGVTAGRPRPT 120
GSQYQPQRRRDPGAAVPGAANASAQQPRTPILLIRDNRTAAARTRTAGSSGVTAGRPRPT
Sbjct: 61 GSQYQPQRRRDPGAAVPGAANASAQQPRTPILLIRDNRTAAARTRTAGSSGVTAGRPRPT 120
Query: 121 ARHWFQAGYSTSRAREAGASRAENQTAPGEVPALSNLRPPSRVDGMVGDDPYNPYKYSDD 180
ARHWFQAGYSTSRAREAGASRAENQTAPGEVPALSNLRPPSRVDGMVGDDPYNPYKYSDD
Sbjct: 121 ARHWFQAGYSTSRAREAGASRAENQTAPGEVPALSNLRPPSRVDGMVGDDPYNPYKYSDD 180
Query: 181 NPYYNYYDTYERPRPGGRYRPGYGTGYFQYGLPDLVADPYYIQASTYVQKMSMYNLRCAA 240
NPYYNYYDTYERPRPGGRYRPGYGTGYFQYGLPDLVADPYYIQASTYVQKMSMYNLRCAA
Sbjct: 181 NPYYNYYDTYERPRPGGRYRPGYGTGYFQYGLPDLVADPYYIQASTYVQKMSMYNLRCAA 240
Query: 241 EENCLASTAYRADVRDYDHRVLLRFPQRVKNQGTSDFLPSRPRYSWEWHSCHQHYHSMDE 300
EENCLASTAYRADVRDYDHRVLLRFPQRVKNQGTSDFLPSRPRYSWEWHSCHQHYHSMDE
Sbjct: 241 EENCLASTAYRADVRDYDHRVLLRFPQRVKNQGTSDFLPSRPRYSWEWHSCHQHYHSMDE 300
Query: 301 FSHYDLLDANTQRRVAEGHKASFCLEDTSCDYGYHRRFACTAHTQGLSPGCYDTYGADID 360
FSHYDLLDANTQRRVAEGHKASFCLEDTSCDYGYHRRFACTAHTQGLSPGCYDTYGADID
Sbjct: 301 FSHYDLLDANTQRRVAEGHKASFCLEDTSCDYGYHRRFACTAHTQGLSPGCYDTYGADID 360
Query: 361 CQWIDITDVKPGNYILKVSVNPSYLVPESDYTNNVVRCDIRYTGHHAYASGCTISPY 417
CQWIDITDVKPGNYILKVSVNPSYLVPESDYTNNVVRCDIRYTGHHAYASGCTISPY
Sbjct: 361 CQWIDITDVKPGNYILKVSVNPSYLVPESDYTNNVVRCDIRYTGHHAYASGCTISPY 417
>gi|67782346 lysyl oxidase-like 1 preproprotein [Homo sapiens]
Length = 574
Score = 357 bits (917), Expect = 8e-99
Identities = 172/268 (64%), Positives = 202/268 (75%), Gaps = 6/268 (2%)
Query: 149 GEVPALSNLRPPSRVDGMVGDDPYNPYKYSDDNPYYNYYDTYERPR--PGGRYRPGYGTG 206
G P +N P + + PY P + SD P + ++ R G YRP
Sbjct: 308 GWYPPYANPPPEAYGPPRALEPPYLPVRSSDTPPPGGERNGAQQGRLSVGSVYRPNQNGR 367
Query: 207 YFQYGLPDLVADPYYIQASTYVQKMSMYNLRCAAEENCLASTAYRADVRDYDHRVLLRFP 266
GLPDLV DP Y+QASTYVQ+ +Y+LRCAAEE CLASTAY + DYD RVLLRFP
Sbjct: 368 ----GLPDLVPDPNYVQASTYVQRAHLYSLRCAAEEKCLASTAYAPEATDYDVRVLLRFP 423
Query: 267 QRVKNQGTSDFLPSRPRYSWEWHSCHQHYHSMDEFSHYDLLDANTQRRVAEGHKASFCLE 326
QRVKNQGT+DFLP+RPR++WEWHSCHQHYHSMDEFSHYDLLDA T ++VAEGHKASFCLE
Sbjct: 424 QRVKNQGTADFLPNRPRHTWEWHSCHQHYHSMDEFSHYDLLDAATGKKVAEGHKASFCLE 483
Query: 327 DTSCDYGYHRRFACTAHTQGLSPGCYDTYGADIDCQWIDITDVKPGNYILKVSVNPSYLV 386
D++CD+G +R+ACT+HTQGLSPGCYDTY ADIDCQWIDITDV+PGNYILKV VNP Y+V
Sbjct: 484 DSTCDFGNLKRYACTSHTQGLSPGCYDTYNADIDCQWIDITDVQPGNYILKVHVNPKYIV 543
Query: 387 PESDYTNNVVRCDIRYTGHHAYASGCTI 414
ESD+TNNVVRC+I YTG + A+ C I
Sbjct: 544 LESDFTNNVVRCNIHYTGRYVSATNCKI 571
Score = 61.6 bits (148), Expect = 1e-09
Identities = 63/207 (30%), Positives = 83/207 (40%), Gaps = 32/207 (15%)
Query: 15 LCALVHCAPPAAGQQQPPREPPAAPGAWRQQIQWENNGQVFSLLSLGSQYQP--QRRRDP 72
LC LVH GQQ P + + P WRQ IQWENNGQV+SLL+ GS+Y P +R +
Sbjct: 19 LCVLVH------GQQAQPGQG-SDPARWRQLIQWENNGQVYSLLNSGSEYVPAGPQRSES 71
Query: 73 GAAVPGAANASAQQPRTPILLIRDNRTAAARTRTAGSSGVTAGRPRPTARHWFQAGYSTS 132
+ V A AQQ R+ R + GS V R ARH F G
Sbjct: 72 SSRVLLAGAPQAQQRRSHGSPRRRQAPSLPLPGRVGSDTV-----RGQARHPFGFGQVPD 126
Query: 133 RARE------AGASRAENQTAPGEVPALSNLRPPSRVDGMVGDDPYNPYKYS-DDNPYYN 185
RE G +RA + ++ S P P ++ P+ +
Sbjct: 127 NWREVAVGDSTGMARARTSVSQQRHGGSASSVSASAFASTYRQQPSYPQQFPYPQAPFVS 186
Query: 186 YYDTYERPRPGGR--------YRPGYG 204
Y+ Y+ P R YRP G
Sbjct: 187 QYENYD---PASRTYDQGFVYYRPAGG 210
>gi|14211943 lysyl oxidase-like 3 precursor [Homo sapiens]
Length = 753
Score = 226 bits (576), Expect = 3e-59
Identities = 106/202 (52%), Positives = 137/202 (67%), Gaps = 3/202 (1%)
Query: 214 DLVADPYYIQASTYVQKMSMYNLRCAAEENCLASTAYRADVRDYDHRVLLRFPQRVKNQG 273
DL+ +Q + Y++ ++ L CAAEENCLAS+A A+ Y HR LLRF ++ N G
Sbjct: 530 DLLLHSALVQETAYIEDRPLHMLYCAAEENCLASSARSANW-PYGHRRLLRFSSQIHNLG 588
Query: 274 TSDFLPSRPRYSWEWHSCHQHYHSMDEFSHYDLLDANTQRRVAEGHKASFCLEDTSCDYG 333
+DF P R+SW WH CH HYHSMD F+HYD+L N + VAEGHKASFCLEDT C
Sbjct: 589 RADFRPKAGRHSWVWHECHGHYHSMDIFTHYDILTPNGTK-VAEGHKASFCLEDTECQED 647
Query: 334 YHRRFACTAH-TQGLSPGCYDTYGADIDCQWIDITDVKPGNYILKVSVNPSYLVPESDYT 392
+R+ C QG++ GC+D Y DIDCQWIDITDVKPGNYIL+V +NP++ V ESD+T
Sbjct: 648 VSKRYECANFGEQGITVGCWDLYRHDIDCQWIDITDVKPGNYILQVVINPNFEVAESDFT 707
Query: 393 NNVVRCDIRYTGHHAYASGCTI 414
NN ++C+ +Y GH + C I
Sbjct: 708 NNAMKCNCKYDGHRIWVHNCHI 729
>gi|67782349 lysyl oxidase-like 4 precursor [Homo sapiens]
Length = 756
Score = 221 bits (564), Expect = 7e-58
Identities = 108/218 (49%), Positives = 140/218 (64%), Gaps = 6/218 (2%)
Query: 196 GGRYRPGYGTGYFQYGLPDLVADPYYIQASTYVQKMSMYNLRCAAEENCLASTAYRADVR 255
GGR+ G PDLV + +Q + Y++ + L CA EENCL+ +A D
Sbjct: 519 GGRFLAGVSC---MDSAPDLVMNAQLVQETAYLEDRPLSQLYCAHEENCLSKSADHMDW- 574
Query: 256 DYDHRVLLRFPQRVKNQGTSDFLPSRPRYSWEWHSCHQHYHSMDEFSHYDLLDANTQRRV 315
Y +R LLRF ++ N G +DF P R SW WH CH+HYHS++ F+HYDLL N + V
Sbjct: 575 PYGYRRLLRFSTQIYNLGRTDFRPKTGRDSWVWHQCHRHYHSIEVFTHYDLLTLNGSK-V 633
Query: 316 AEGHKASFCLEDTSCDYGYHRRFACTAH-TQGLSPGCYDTYGADIDCQWIDITDVKPGNY 374
AEGHKASFCLEDT+C G RR+AC QG++ GC+DTY DIDCQW+DITDV PGNY
Sbjct: 634 AEGHKASFCLEDTNCPTGLQRRYACANFGEQGVTVGCWDTYRHDIDCQWVDITDVGPGNY 693
Query: 375 ILKVSVNPSYLVPESDYTNNVVRCDIRYTGHHAYASGC 412
I +V VNP Y V ESD++NN+++C +Y GH + C
Sbjct: 694 IFQVIVNPHYEVAESDFSNNMLQCRCKYDGHRVWLHNC 731
>gi|4505011 lysyl oxidase-like 2 precursor [Homo sapiens]
Length = 774
Score = 221 bits (562), Expect = 1e-57
Identities = 100/203 (49%), Positives = 139/203 (68%), Gaps = 3/203 (1%)
Query: 213 PDLVADPYYIQASTYVQKMSMYNLRCAAEENCLASTAYRADVRDYDHRVLLRFPQRVKNQ 272
PDLV + +Q +TY++ M+ L+CA EENCL+++A + D +R LLRF ++ N
Sbjct: 548 PDLVLNAEMVQQTTYLEDRPMFMLQCAMEENCLSASAAQTDPTT-GYRRLLRFSSQIHNN 606
Query: 273 GTSDFLPSRPRYSWEWHSCHQHYHSMDEFSHYDLLDANTQRRVAEGHKASFCLEDTSCDY 332
G SDF P R++W WH CH+HYHSM+ F+HYDLL+ N + VAEGHKASFCLEDT C+
Sbjct: 607 GQSDFRPKNGRHAWIWHDCHRHYHSMEVFTHYDLLNLNGTK-VAEGHKASFCLEDTECEG 665
Query: 333 GYHRRFACTAH-TQGLSPGCYDTYGADIDCQWIDITDVKPGNYILKVSVNPSYLVPESDY 391
+ + C QG++ GC+D Y DIDCQW+DITDV PG+Y+ +V +NP++ V ESDY
Sbjct: 666 DIQKNYECANFGDQGITMGCWDMYRHDIDCQWVDITDVPPGDYLFQVVINPNFEVAESDY 725
Query: 392 TNNVVRCDIRYTGHHAYASGCTI 414
+NN+++C RY GH + C I
Sbjct: 726 SNNIMKCRSRYDGHRIWMYNCHI 748
>gi|45592959 LIM domain binding 3 isoform 1 [Homo sapiens]
Length = 727
Score = 38.9 bits (89), Expect = 0.009
Identities = 43/157 (27%), Positives = 56/157 (35%), Gaps = 20/157 (12%)
Query: 66 PQRRRDPGAAVPGAANASAQQPRTPILLIRDNRTAAARTRTAGSSGVTAGRPRPTARHWF 125
P + P AA P AA+ P L TA A T + A PRP A +
Sbjct: 318 PASAQPPAAASPSAAS--------PPLATAAAHTAIASASTTAPASSPADSPRPQASSYS 369
Query: 126 QAGYSTSRAREAGASRAENQTAPGEVPAL---SNLRPPSRVDGMVGDDPYNPYKYSDDNP 182
A + S A S +E AP P + +++RP V V Y+P +P
Sbjct: 370 PA-VAASSAPATHTSYSEGPAAPAPKPRVVTTASIRPS--VYQPVPASTYSP------SP 420
Query: 183 YYNYYDTYERPRPGGRYRPGYGTGYFQYGLPDLVADP 219
NY T P P Y P Y +P P
Sbjct: 421 GANYSPTPYTPSPAPAYTPSPAPAYTPSPVPTYTPSP 457
>gi|169165751 PREDICTED: hypothetical protein [Homo sapiens]
Length = 186
Score = 38.5 bits (88), Expect = 0.011
Identities = 43/130 (33%), Positives = 52/130 (40%), Gaps = 14/130 (10%)
Query: 24 PAAGQQQPPREPPAAPGAWRQQIQWENNGQVFSLL----SLGSQYQPQRRRDPGAAVPGA 79
PA G + R PP P A R W +G L S GSQ P+ +R P P A
Sbjct: 60 PARGPWRVLRRPPQ-PTAPRASDAWHRSGPQRVALTRRGSCGSQCAPRGKRQPLRPAPRA 118
Query: 80 ANASAQQ----PRTPILLIRDNRTAAARTRTA---GSSGVTAGRPRPTARHWFQAGYSTS 132
A SA+ P P IR R+ +A G SG GRPR + A +
Sbjct: 119 ARGSARPLGFCPACP--RIRRGSPGVHRSASASAGGGSGDWQGRPRGDHQRGCGAQAESG 176
Query: 133 RAREAGASRA 142
RAR S A
Sbjct: 177 RARPLLTSMA 186
>gi|169166086 PREDICTED: hypothetical protein [Homo sapiens]
Length = 186
Score = 38.5 bits (88), Expect = 0.011
Identities = 43/130 (33%), Positives = 52/130 (40%), Gaps = 14/130 (10%)
Query: 24 PAAGQQQPPREPPAAPGAWRQQIQWENNGQVFSLL----SLGSQYQPQRRRDPGAAVPGA 79
PA G + R PP P A R W +G L S GSQ P+ +R P P A
Sbjct: 60 PARGPWRVLRRPPQ-PTAPRASDAWHRSGPQRVALTRRGSCGSQCAPRGKRQPLRPAPRA 118
Query: 80 ANASAQQ----PRTPILLIRDNRTAAARTRTA---GSSGVTAGRPRPTARHWFQAGYSTS 132
A SA+ P P IR R+ +A G SG GRPR + A +
Sbjct: 119 ARGSARPLGFCPACP--RIRRGSPGVHRSASASAGGGSGDWQGRPRGDHQRGCGAQAESG 176
Query: 133 RAREAGASRA 142
RAR S A
Sbjct: 177 RARPLLTSMA 186
>gi|169165286 PREDICTED: hypothetical protein [Homo sapiens]
Length = 186
Score = 38.5 bits (88), Expect = 0.011
Identities = 43/130 (33%), Positives = 52/130 (40%), Gaps = 14/130 (10%)
Query: 24 PAAGQQQPPREPPAAPGAWRQQIQWENNGQVFSLL----SLGSQYQPQRRRDPGAAVPGA 79
PA G + R PP P A R W +G L S GSQ P+ +R P P A
Sbjct: 60 PARGPWRVLRRPPQ-PTAPRASDAWHRSGPQRVALTRRGSCGSQCAPRGKRQPLRPAPRA 118
Query: 80 ANASAQQ----PRTPILLIRDNRTAAARTRTA---GSSGVTAGRPRPTARHWFQAGYSTS 132
A SA+ P P IR R+ +A G SG GRPR + A +
Sbjct: 119 ARGSARPLGFCPACP--RIRRGSPGVHRSASASAGGGSGDWQGRPRGDHQRGCGAQAESG 176
Query: 133 RAREAGASRA 142
RAR S A
Sbjct: 177 RARPLLTSMA 186
>gi|239753839 PREDICTED: hypothetical protein [Homo sapiens]
Length = 257
Score = 37.7 bits (86), Expect = 0.019
Identities = 37/135 (27%), Positives = 53/135 (39%), Gaps = 8/135 (5%)
Query: 21 CAPPAAGQQQPPREPPAAPGAWRQQIQWENNGQVFSLLSLGSQYQPQRRRDP--GAAVPG 78
C P G+ R PA A E G + S G++ P RR P G G
Sbjct: 105 CRAPGRGRAAATRRSPAPGTARGSPAGVERAGGATAASSAGTRSVPARRLPPPCGGTSLG 164
Query: 79 AANASAQQPRTPILLIRDNRTAAARTRTAGSSGVTAGRPRPTARHWFQAGYSTSRAREAG 138
A + + ++P + L R+ ++ R A G G PRP A + G++ + A
Sbjct: 165 AGSRALRRPGSAAL----PRSPSSSRRWAAMPG--PGAPRPGAPGTWPVGFAVAAPPAAA 218
Query: 139 ASRAENQTAPGEVPA 153
AS A A PA
Sbjct: 219 ASVAPPPPAVAGAPA 233
>gi|148237270 hypermethylated in cancer 1 isoform 2 [Homo sapiens]
Length = 733
Score = 37.0 bits (84), Expect = 0.033
Identities = 55/210 (26%), Positives = 73/210 (34%), Gaps = 40/210 (19%)
Query: 24 PAAGQQQPPRE---PPAAPGAWRQQIQWENNGQVFSLLSLGSQYQPQRRRDPGAAVPGAA 80
P A ++ PPR P A P A+++ + L P G+ PG
Sbjct: 258 PLAERELPPRPDSPPSAGPAAYKEPPLALPSLPPLPFQKLEEAAPPSDPFRGGSGSPGPE 317
Query: 81 NASAQQPRTPILLIRDNRTAAARTRTAGSSGVTAGRPRPTARHWFQAGYSTSRAREAGAS 140
+P P LL R + GS G GR R G + R E G
Sbjct: 318 PPG--RPDGPSLLYRWMKHEPG----LGSYGDELGRER---------GSPSERCEERGGD 362
Query: 141 RAENQTAPGEVPALSNLRPPSRVDGMV--------GDDPYNPYKYSDDNPYYNYYDTYER 192
A +PG P L PP R G + GDD YK S + + E
Sbjct: 363 AA---VSPGGPPL--GLAPPPRYPGSLDGPGAGGDGDD----YKSSSEET-----GSSED 408
Query: 193 PRPGGRYRPGYGTGYFQYGLPDLVADPYYI 222
P P G + GY + YG P+ D Y+
Sbjct: 409 PSPPGGHLEGYPCPHLAYGEPESFGDNLYV 438
>gi|61676186 hypermethylated in cancer 1 isoform 1 [Homo sapiens]
Length = 714
Score = 37.0 bits (84), Expect = 0.033
Identities = 55/210 (26%), Positives = 73/210 (34%), Gaps = 40/210 (19%)
Query: 24 PAAGQQQPPRE---PPAAPGAWRQQIQWENNGQVFSLLSLGSQYQPQRRRDPGAAVPGAA 80
P A ++ PPR P A P A+++ + L P G+ PG
Sbjct: 239 PLAERELPPRPDSPPSAGPAAYKEPPLALPSLPPLPFQKLEEAAPPSDPFRGGSGSPGPE 298
Query: 81 NASAQQPRTPILLIRDNRTAAARTRTAGSSGVTAGRPRPTARHWFQAGYSTSRAREAGAS 140
+P P LL R + GS G GR R G + R E G
Sbjct: 299 PPG--RPDGPSLLYRWMKHEPG----LGSYGDELGRER---------GSPSERCEERGGD 343
Query: 141 RAENQTAPGEVPALSNLRPPSRVDGMV--------GDDPYNPYKYSDDNPYYNYYDTYER 192
A +PG P L PP R G + GDD YK S + + E
Sbjct: 344 AA---VSPGGPPL--GLAPPPRYPGSLDGPGAGGDGDD----YKSSSEET-----GSSED 389
Query: 193 PRPGGRYRPGYGTGYFQYGLPDLVADPYYI 222
P P G + GY + YG P+ D Y+
Sbjct: 390 PSPPGGHLEGYPCPHLAYGEPESFGDNLYV 419
>gi|74271903 chondroitin sulfate synthase 3 [Homo sapiens]
Length = 882
Score = 36.6 bits (83), Expect = 0.043
Identities = 50/188 (26%), Positives = 68/188 (36%), Gaps = 28/188 (14%)
Query: 23 PPAAGQQQPPREPPAAPGAWR-QQIQWENNGQVFSLLSLGSQYQPQRRRDPGAA--VPGA 79
PPA Q P P AAPG + W+ + Q +R R+P A +PGA
Sbjct: 77 PPARQDLQGPPLPEAAPGITSFRSSPWQQPPPL---------QQRRRGREPEGATGLPGA 127
Query: 80 ANASAQQPRTPILLIRDNRTAAARTRTAGSSGVTAGRPRPTARHWFQAGYSTSR----AR 135
A + R + GS A P R + G T++ +R
Sbjct: 128 PAAEGEPEEEDGGAAGQRRDGRPGSSHNGSGDGGAAAPSARPRDFLYVGVMTAQKYLGSR 187
Query: 136 EAGASRAENQTAPGEVPALSNLRPPSR--------VDGMVG-DDPYNPYKYSDDNPYY-- 184
A R + PG V S+ +PP+ V + G DD Y P K S Y
Sbjct: 188 ALAAQRTWARFIPGRVEFFSSQQPPNAGQPPPPLPVIALPGVDDSYPPQKKSFMMIKYMH 247
Query: 185 -NYYDTYE 191
+Y D YE
Sbjct: 248 DHYLDKYE 255
>gi|197333868 T-box 2 [Homo sapiens]
Length = 712
Score = 36.2 bits (82), Expect = 0.057
Identities = 30/141 (21%), Positives = 47/141 (33%), Gaps = 9/141 (6%)
Query: 20 HCAPPAAGQQQ--------PPREPPAAPGAWRQQIQWENNGQVFSLLSLGSQYQPQRRRD 71
HC P G + P REPP +PGA ++ + S +P+R +
Sbjct: 310 HCKPERDGAESDASSCDPPPAREPPTSPGAAPSPLRLHRARAEEKSCAADSDPEPERLSE 369
Query: 72 PGAAVPGAANASAQQPRTPILLIRDNRTAAARTRTAGSSGVTAGRPRPTARHWFQAGYST 131
A P + A +P L R R+ G +G P + +
Sbjct: 370 ERAGAP-LGRSPAPDSASPTRLTEPERARERRSPERGKEPAESGGDGPFGLRSLEKERAE 428
Query: 132 SRAREAGASRAENQTAPGEVP 152
+R ++ G A G P
Sbjct: 429 ARRKDEGRKEAAEGKEQGLAP 449
>gi|122937251 lysine (K)-specific demethylase 6B [Homo sapiens]
Length = 1682
Score = 35.0 bits (79), Expect = 0.13
Identities = 41/150 (27%), Positives = 56/150 (37%), Gaps = 27/150 (18%)
Query: 24 PAAGQQQPPREPPAAPGAWRQQIQWENNGQVFSLLSLGSQYQPQRRRDPGAAV---PGAA 80
P Q QPP PP +P + + + GQ + R GAAV PG
Sbjct: 785 PPPSQPQPPPPPPPSPASLLKSLASVLEGQKYCY------------RGTGAAVSTRPGPL 832
Query: 81 NASAQQPRTPILLIRDNRTAAARTRTAGSSGVTAGRPRPTARHWFQ---AGYSTSRAREA 137
+ P P TA T A S+ G P+P+A Q +G +R R A
Sbjct: 833 PTTQYSPGPP-----SGATALPPTSAAPSA---QGSPQPSASSSSQFSTSGGPWARERRA 884
Query: 138 GASRAENQTAPGEVPALSNLRPPSRVDGMV 167
G P + P +L PP+R + V
Sbjct: 885 GEEPVPGPMTPTQPPPPLSL-PPARSESEV 913
>gi|58761548 tau tubulin kinase 1 [Homo sapiens]
Length = 1321
Score = 34.7 bits (78), Expect = 0.16
Identities = 34/130 (26%), Positives = 50/130 (38%), Gaps = 10/130 (7%)
Query: 24 PAAGQQQPPREPPAAPG---AWRQQIQWENNGQVFSLLSLGSQYQPQRRRDPGAAVPGAA 80
P A QQ R AAP A ++Q + + L + P R PG A GA
Sbjct: 1167 PVAAQQPASRSHGAAPALDTAITSRLQLQTPPGSATAADLRPKQPPGRGLGPGRAQAGAR 1226
Query: 81 NASAQQPRTPILLIRDNRTAAARTRTAG-SSGVTAGRPRPTARHWFQAGYSTSRAREAGA 139
+ + PR P T+AAR +A S + R P+ H + G R
Sbjct: 1227 PPAPRSPRLPA------STSAARNASASPRSQSLSRRESPSPSHQARPGVPPPRGVPPAR 1280
Query: 140 SRAENQTAPG 149
++ + +PG
Sbjct: 1281 AQPDGTPSPG 1290
>gi|33286446 opioid growth factor receptor [Homo sapiens]
Length = 677
Score = 33.9 bits (76), Expect = 0.28
Identities = 38/149 (25%), Positives = 55/149 (36%), Gaps = 11/149 (7%)
Query: 28 QQQPPREPPAAPGAWRQQIQWENNGQVFSLLSLGSQYQPQRRRDPGAAVPGAANASAQQP 87
++QPP EP + ++I G S SL + Q +DPG AV +
Sbjct: 392 REQPPTEPGPQSASEVEKIALNLEGCALSQGSLRTGTQEVGGQDPGEAVQPCRQPLGARV 451
Query: 88 RTPILLIRDNRTAAARTRTAGSSG----VTAGRPRPTARHWFQAGYSTSRAREAGASRAE 143
+ R A + S G AG P P+ +AG+S + E E
Sbjct: 452 ADKVRKRRKVDEGAGDSAAVASGGAQTLALAGSPAPSGHP--KAGHSENGVEE----DTE 505
Query: 144 NQTAPGE-VPALSNLRPPSRVDGMVGDDP 171
+T P E P + P G GD+P
Sbjct: 506 GRTGPKEGTPGSPSETPGPSPAGPAGDEP 534
>gi|222352129 von Willebrand factor A domain containing 5B2 [Homo
sapiens]
Length = 1242
Score = 33.5 bits (75), Expect = 0.37
Identities = 40/141 (28%), Positives = 53/141 (37%), Gaps = 24/141 (17%)
Query: 5 WTVLLLGPLQLCALVHCAPPAAGQQQPPREPPAAPG--------AWRQQIQWENNGQVFS 56
W +L+ P A+ P +G+ PP PP AP Q + WE + +
Sbjct: 808 WDMLMEPPFLFTAV-----PPSGELAPPAVPPQAPRCHVVIRGLCGEQPMCWEVGVGLET 862
Query: 57 LLSLGSQYQPQRRRDPGAAVPGAANASAQQPRTPILLIRDNRTAAARTRTAGSSGVTAGR 116
L G QP P V AA A T ++RDN A R G + TA R
Sbjct: 863 LWGPGDGSQP-----PSPPVREAAWDQALHRLTAASVVRDNEQLALR----GGAETTADR 913
Query: 117 PRPTARHWFQAGYSTSRAREA 137
R W +A TS+ A
Sbjct: 914 GH-ARRCWLRA-LQTSKVSSA 932
>gi|55956910 meningioma 1 [Homo sapiens]
Length = 1320
Score = 33.5 bits (75), Expect = 0.37
Identities = 49/189 (25%), Positives = 69/189 (36%), Gaps = 31/189 (16%)
Query: 19 VHCAPPAAG--QQQPPREPPAAPGAWRQQIQWENNGQVFSLLSLGSQYQ----PQRRRDP 72
+H PP QQQ P++ G + ++ V S+GS++ PQ+ P
Sbjct: 288 MHAQPPQQQPQQQQQPQQQQQQHGVFFERFSGARKMPVGLEPSVGSRHPLMQPPQQAPPP 347
Query: 73 GAAVPGAANASAQQPRTPILLIRDNRTAAARTR----TAG--SSGVTAGRPRPTARHWFQ 126
P Q P P LL+R N A R AG S G+ G P ++H
Sbjct: 348 PQQQPPQQPPQQQPPPPPGLLVRQNSCPPALPRPQQGEAGTPSGGLQDGGPMLPSQH--- 404
Query: 127 AGYSTSRAREAGASRAENQTA-PGEVPALSNLRPPSRVDGMVGDDPYNPYKYSDDNPYYN 185
E R EN++ P P S PP + P ++ D PY N
Sbjct: 405 ------AQFEYPIHRLENRSMHPYSEPVFSMQHPPPQ------QAPNQRLQHFDAPPYMN 452
Query: 186 YYDTYERPR 194
+RPR
Sbjct: 453 ---VAKRPR 458
>gi|224451032 KIAA1683 isoform a [Homo sapiens]
Length = 1367
Score = 32.7 bits (73), Expect = 0.63
Identities = 41/143 (28%), Positives = 59/143 (41%), Gaps = 22/143 (15%)
Query: 18 LVHCAPPAAGQQQPPREPPAAPGAWRQQIQWENNGQVFSLLSLGSQYQPQRRRDPGAAVP 77
LV C P Q P +PPAA G +Q + +V L L +Q R P P
Sbjct: 200 LVLCRP----QSSPLLQPPAAQGTPEPCVQGPHAARVRGLAFL--PHQTVTIRFP---CP 250
Query: 78 GAANASAQQPRTPILLIRDNRTA--------AARTRTAGSSGVTAGRPR-PTARHWFQAG 128
+ +A Q P LL R R+ + +T+ + A P P +R + QA
Sbjct: 251 VSLDAKCQ----PCLLTRTIRSTCLVHIEGDSVKTKRVSARTNKARAPETPLSRRYDQAV 306
Query: 129 YSTSRAREAGASRAENQTAPGEV 151
SRA+ G +AE AP ++
Sbjct: 307 TRPSRAQTQGPVKAETPKAPFQI 329
>gi|52630419 sterol regulatory element binding transcription factor 1
isoform a [Homo sapiens]
Length = 1177
Score = 32.7 bits (73), Expect = 0.63
Identities = 35/106 (33%), Positives = 42/106 (39%), Gaps = 9/106 (8%)
Query: 28 QQQPPREPPAAPG--AWRQQIQWENNG---QVFSLLSLGSQYQPQRRRDPGAAVPGAANA 82
QQQPP PAA G + Q E G + SL L ++P RR A
Sbjct: 1017 QQQPPAPAPAAQGTSSRPQASALELRGFQRDLSSLRRLAQSFRPAMRRVFLHEATARLMA 1076
Query: 83 SAQQPRTPILLIRDNRTAAARTRTAGSSGVTAG-RPRPTARHWFQA 127
A RT LL +R+ R G G A PRPT R +A
Sbjct: 1077 GASPTRTHQLL---DRSLRRRAGPGGKGGAVAELEPRPTRREHAEA 1119
>gi|22547195 sterol regulatory element binding transcription factor 1
isoform b [Homo sapiens]
Length = 1147
Score = 32.7 bits (73), Expect = 0.63
Identities = 35/106 (33%), Positives = 42/106 (39%), Gaps = 9/106 (8%)
Query: 28 QQQPPREPPAAPG--AWRQQIQWENNG---QVFSLLSLGSQYQPQRRRDPGAAVPGAANA 82
QQQPP PAA G + Q E G + SL L ++P RR A
Sbjct: 987 QQQPPAPAPAAQGTSSRPQASALELRGFQRDLSSLRRLAQSFRPAMRRVFLHEATARLMA 1046
Query: 83 SAQQPRTPILLIRDNRTAAARTRTAGSSGVTAG-RPRPTARHWFQA 127
A RT LL +R+ R G G A PRPT R +A
Sbjct: 1047 GASPTRTHQLL---DRSLRRRAGPGGKGGAVAELEPRPTRREHAEA 1089
>gi|239752201 PREDICTED: hypothetical protein XP_002348147 [Homo
sapiens]
Length = 935
Score = 32.7 bits (73), Expect = 0.63
Identities = 29/97 (29%), Positives = 40/97 (41%), Gaps = 5/97 (5%)
Query: 68 RRRDPGAAVPGAANASAQQPRTPILLIRDNRTAAARTR-----TAGSSGVTAGRPRPTAR 122
R R GA PG + S + P RD +T R + G + +TAGR
Sbjct: 759 RDRARGAGQPGPGSGSGAERAGPERRARDTQTRTRRDKLTDSARGGRARLTAGRRVRRES 818
Query: 123 HWFQAGYSTSRAREAGASRAENQTAPGEVPALSNLRP 159
+AG ++ A ASRA + +PA S RP
Sbjct: 819 GRRRAGATSQGAIRRAASRARKGESRRPLPANSAGRP 855
>gi|224451036 KIAA1683 isoform c [Homo sapiens]
Length = 1134
Score = 32.7 bits (73), Expect = 0.63
Identities = 41/143 (28%), Positives = 59/143 (41%), Gaps = 22/143 (15%)
Query: 18 LVHCAPPAAGQQQPPREPPAAPGAWRQQIQWENNGQVFSLLSLGSQYQPQRRRDPGAAVP 77
LV C P Q P +PPAA G +Q + +V L L +Q R P P
Sbjct: 154 LVLCRP----QSSPLLQPPAAQGTPEPCVQGPHAARVRGLAFL--PHQTVTIRFP---CP 204
Query: 78 GAANASAQQPRTPILLIRDNRTA--------AARTRTAGSSGVTAGRPR-PTARHWFQAG 128
+ +A Q P LL R R+ + +T+ + A P P +R + QA
Sbjct: 205 VSLDAKCQ----PCLLTRTIRSTCLVHIEGDSVKTKRVSARTNKARAPETPLSRRYDQAV 260
Query: 129 YSTSRAREAGASRAENQTAPGEV 151
SRA+ G +AE AP ++
Sbjct: 261 TRPSRAQTQGPVKAETPKAPFQI 283
>gi|54606862 KIAA1683 isoform b [Homo sapiens]
Length = 1180
Score = 32.7 bits (73), Expect = 0.63
Identities = 41/143 (28%), Positives = 59/143 (41%), Gaps = 22/143 (15%)
Query: 18 LVHCAPPAAGQQQPPREPPAAPGAWRQQIQWENNGQVFSLLSLGSQYQPQRRRDPGAAVP 77
LV C P Q P +PPAA G +Q + +V L L +Q R P P
Sbjct: 200 LVLCRP----QSSPLLQPPAAQGTPEPCVQGPHAARVRGLAFL--PHQTVTIRFP---CP 250
Query: 78 GAANASAQQPRTPILLIRDNRTA--------AARTRTAGSSGVTAGRPR-PTARHWFQAG 128
+ +A Q P LL R R+ + +T+ + A P P +R + QA
Sbjct: 251 VSLDAKCQ----PCLLTRTIRSTCLVHIEGDSVKTKRVSARTNKARAPETPLSRRYDQAV 306
Query: 129 YSTSRAREAGASRAENQTAPGEV 151
SRA+ G +AE AP ++
Sbjct: 307 TRPSRAQTQGPVKAETPKAPFQI 329
>gi|158534055 round spermatid basic protein 1-like [Homo sapiens]
Length = 846
Score = 32.7 bits (73), Expect = 0.63
Identities = 41/138 (29%), Positives = 55/138 (39%), Gaps = 23/138 (16%)
Query: 28 QQQPPREPPAAPGAWRQQIQWENNGQVFSLLSLGSQYQPQRRR---DPGAAVPGAANASA 84
Q QPP P +P ++ W F+ LS R G AVP +A+AS
Sbjct: 68 QLQPPAAP--SPQSYGSPASWS-----FAPLSAAPSPSSSRSSFSFSAGTAVPSSASASL 120
Query: 85 QQPRTPILLI-------RDNRTAAARTRTAGSSGVTAGRPRPTARHWFQAGYSTSRAREA 137
QP LL+ + + A S+ + RP+ R + + AREA
Sbjct: 121 SQPVPRKLLVPPTLLHAQPHHLLLPAAAAAASANAKSRRPK-EKREKERRRHGLGGAREA 179
Query: 138 -GASRAENQTAPGEVPAL 154
GASR EN GEV L
Sbjct: 180 GGASREEN----GEVKPL 193
>gi|148596988 mucoepidermoid carcinoma translocated 1 isoform 3
[Homo sapiens]
Length = 650
Score = 32.3 bits (72), Expect = 0.82
Identities = 37/140 (26%), Positives = 54/140 (38%), Gaps = 15/140 (10%)
Query: 23 PPAAGQQQPPREPPAAPGAWRQQIQWENNGQVFSLLSL--GSQYQPQRRRDPGAAVPGAA 80
PP A QQ PP PP AP ++ G + SL G Q P P +++P +
Sbjct: 389 PPPASQQPPPPPPPQAP------VRLPPGGPLLPSASLTRGPQPPPLAVTVP-SSLPQSP 441
Query: 81 NASAQQPRTPILLIRDNRTAAARTRTAGSSGVTAGRPRPTARHWFQAGYSTSRAREAGA- 139
+ QP I + + A + RT+ S P + F G S G+
Sbjct: 442 PENPGQPSMGIDIA--SAPALQQYRTSAGSPANQSPTSPVSNQGFSPGSSPQHTSTLGSV 499
Query: 140 ---SRAENQTAPGEVPALSN 156
+ E Q A + ALS+
Sbjct: 500 FGDAYYEQQMAARQANALSH 519
>gi|148596965 mucoepidermoid carcinoma translocated 1 isoform 1
[Homo sapiens]
Length = 634
Score = 32.3 bits (72), Expect = 0.82
Identities = 37/140 (26%), Positives = 54/140 (38%), Gaps = 15/140 (10%)
Query: 23 PPAAGQQQPPREPPAAPGAWRQQIQWENNGQVFSLLSL--GSQYQPQRRRDPGAAVPGAA 80
PP A QQ PP PP AP ++ G + SL G Q P P +++P +
Sbjct: 373 PPPASQQPPPPPPPQAP------VRLPPGGPLLPSASLTRGPQPPPLAVTVP-SSLPQSP 425
Query: 81 NASAQQPRTPILLIRDNRTAAARTRTAGSSGVTAGRPRPTARHWFQAGYSTSRAREAGA- 139
+ QP I + + A + RT+ S P + F G S G+
Sbjct: 426 PENPGQPSMGIDIA--SAPALQQYRTSAGSPANQSPTSPVSNQGFSPGSSPQHTSTLGSV 483
Query: 140 ---SRAENQTAPGEVPALSN 156
+ E Q A + ALS+
Sbjct: 484 FGDAYYEQQMAARQANALSH 503
>gi|5174573 myeloid/lymphoid or mixed-lineage leukemia trithorax
homolog 2 [Homo sapiens]
Length = 1210
Score = 32.3 bits (72), Expect = 0.82
Identities = 37/145 (25%), Positives = 56/145 (38%), Gaps = 23/145 (15%)
Query: 23 PPAAGQQQPPREPPAAPGAWRQQIQWENNGQVFSLLSLGSQYQPQRR----RDPGAAVPG 78
PP + PR PP AP ++ Q S Q PQR+ + P V
Sbjct: 562 PPPKSSSKAPRAPPEAPHPGKRSCQ----------KSPAQQEPPQRQTVGTKQPKKPVKA 611
Query: 79 AANA----SAQQPRTPILLIRDNRTAAARTRTAGSSGVTAGRPRPTARHWFQAGY--STS 132
+A A S Q R P LL +R ++ + T GRPR A + + S+
Sbjct: 612 SARAGSRTSLQGEREPGLLPYGSRDQTSKDKPKVK---TKGRPRAAASNEPKPAVPPSSE 668
Query: 133 RAREAGASRAENQTAPGEVPALSNL 157
+ + + A ++ G PA N+
Sbjct: 669 KKKHKSSLPAPSKALSGPEPAKDNV 693
>gi|185135971 poly(A)-binding protein, cytoplasmic 1-like [Homo
sapiens]
Length = 614
Score = 32.0 bits (71), Expect = 1.1
Identities = 33/109 (30%), Positives = 45/109 (41%), Gaps = 16/109 (14%)
Query: 70 RDPGAAVPGAANASAQQPRTPILLIRDNRTAAARTRTAGSSGV---TAGRPRPTARHWFQ 126
R P A + AS Q PRT + R A T+T G SGV T GRP +
Sbjct: 455 RRPPAHISSVRQASTQVPRT---VPHTQRVANIGTQTTGPSGVGCCTPGRPLLPCK-CSS 510
Query: 127 AGYSTSRAREAGASRAENQTAPGEVPALSNL---RPPSRVDGMVGDDPY 172
A +ST R +E PG+ P +++ P M+G+ Y
Sbjct: 511 AAHSTYRVQEPAVH------IPGQEPLTASMLAAAPLHEQKQMIGERLY 553
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.135 0.437
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,856,229
Number of Sequences: 37866
Number of extensions: 1029163
Number of successful extensions: 4511
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 111
Number of HSP's that attempted gapping in prelim test: 4384
Number of HSP's gapped (non-prelim): 223
length of query: 417
length of database: 18,247,518
effective HSP length: 105
effective length of query: 312
effective length of database: 14,271,588
effective search space: 4452735456
effective search space used: 4452735456
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.