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Search of human proteins with 20127408
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|20127408 mitochondrial trifunctional protein, alpha subunit
precursor [Homo sapiens]
(763 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|20127408 mitochondrial trifunctional protein, alpha subunit p... 1491 0.0
gi|68989263 enoyl-Coenzyme A, hydratase/3-hydroxyacyl Coenzyme A... 284 2e-76
gi|94557308 L-3-hydroxyacyl-Coenzyme A dehydrogenase precursor [... 162 1e-39
gi|4502327 AU RNA binding protein/enoyl-Coenzyme A hydratase pre... 109 8e-24
gi|194097323 mitochondrial short-chain enoyl-coenzyme A hydratas... 97 6e-20
gi|70995211 peroxisomal enoyl-coenzyme A hydratase-like protein ... 77 5e-14
gi|62530384 dodecenoyl-Coenzyme A delta isomerase precursor [Hom... 73 9e-13
gi|150378541 enoyl Coenzyme A hydratase domain containing 2 [Hom... 69 2e-11
gi|221307494 chromodomain protein, Y chromosome-like isoform a [... 67 8e-11
gi|221136756 chromodomain protein, Y chromosome-like isoform d [... 67 8e-11
gi|221136753 chromodomain protein, Y chromosome-like isoform d [... 67 8e-11
gi|37594469 3-hydroxyisobutyryl-Coenzyme A hydrolase isoform 2 [... 64 5e-10
gi|37594471 3-hydroxyisobutyryl-Coenzyme A hydrolase isoform 1 [... 64 5e-10
gi|157694516 enoyl Coenzyme A hydratase domain containing 1 isof... 63 1e-09
gi|213417737 enoyl Coenzyme A hydratase domain containing 1 isof... 63 1e-09
gi|116235487 chromodomain protein, Y-like 2 [Homo sapiens] 63 1e-09
gi|115430219 lambda-crystallin [Homo sapiens] 61 3e-09
gi|31542718 enoyl Coenzyme A hydratase domain containing 3 [Homo... 60 1e-08
gi|157694520 enoyl Coenzyme A hydratase domain containing 1 isof... 58 4e-08
gi|4757966 Y chromosome chromodomain protein 1, telomeric isofor... 57 6e-08
gi|25453481 Y chromosome chromodomain protein 1, telomeric isofo... 57 6e-08
gi|51538581 chromodomain protein, Y-linked, 1B isoform b [Homo s... 57 6e-08
gi|51538573 chromodomain protein, Y-linked, 1B isoform a [Homo s... 57 6e-08
gi|49355787 Y chromosome chromodomain protein 2B [Homo sapiens] 57 6e-08
gi|4757968 Y chromosome chromodomain protein 2A [Homo sapiens] 57 6e-08
gi|45643121 peroxisomal D3,D2-enoyl-CoA isomerase isoform 2 [Hom... 38 0.031
gi|45643119 peroxisomal D3,D2-enoyl-CoA isomerase isoform 1 [Hom... 38 0.031
gi|217330559 unc-51-like kinase 2 [Homo sapiens] 35 0.20
gi|217330557 unc-51-like kinase 2 [Homo sapiens] 35 0.20
gi|207028821 RNA binding motif protein 44 [Homo sapiens] 33 1.3
>gi|20127408 mitochondrial trifunctional protein, alpha subunit
precursor [Homo sapiens]
Length = 763
Score = 1491 bits (3860), Expect = 0.0
Identities = 763/763 (100%), Positives = 763/763 (100%)
Query: 1 MVACRAIGILSRFSAFRILRSRGYICRNFTGSSALLTRTHINYGVKGDVAVVRINSPNSK 60
MVACRAIGILSRFSAFRILRSRGYICRNFTGSSALLTRTHINYGVKGDVAVVRINSPNSK
Sbjct: 1 MVACRAIGILSRFSAFRILRSRGYICRNFTGSSALLTRTHINYGVKGDVAVVRINSPNSK 60
Query: 61 VNTLSKELHSEFSEVMNEIWASDQIRSAVLISSKPGCFIAGADINMLAACKTLQEVTQLS 120
VNTLSKELHSEFSEVMNEIWASDQIRSAVLISSKPGCFIAGADINMLAACKTLQEVTQLS
Sbjct: 61 VNTLSKELHSEFSEVMNEIWASDQIRSAVLISSKPGCFIAGADINMLAACKTLQEVTQLS 120
Query: 121 QEAQRIVEKLEKSTKPIVAAINGSCLGGGLEVAISCQYRIATKDRKTVLGTPEVLLGALP 180
QEAQRIVEKLEKSTKPIVAAINGSCLGGGLEVAISCQYRIATKDRKTVLGTPEVLLGALP
Sbjct: 121 QEAQRIVEKLEKSTKPIVAAINGSCLGGGLEVAISCQYRIATKDRKTVLGTPEVLLGALP 180
Query: 181 GAGGTQRLPKMVGVPAALDMMLTGRSIRADRAKKMGLVDQLVEPLGPGLKPPEERTIEYL 240
GAGGTQRLPKMVGVPAALDMMLTGRSIRADRAKKMGLVDQLVEPLGPGLKPPEERTIEYL
Sbjct: 181 GAGGTQRLPKMVGVPAALDMMLTGRSIRADRAKKMGLVDQLVEPLGPGLKPPEERTIEYL 240
Query: 241 EEVAITFAKGLADKKISPKRDKGLVEKLTAYAMTIPFVRQQVYKKVEEKVRKQTKGLYPA 300
EEVAITFAKGLADKKISPKRDKGLVEKLTAYAMTIPFVRQQVYKKVEEKVRKQTKGLYPA
Sbjct: 241 EEVAITFAKGLADKKISPKRDKGLVEKLTAYAMTIPFVRQQVYKKVEEKVRKQTKGLYPA 300
Query: 301 PLKIIDVVKTGIEQGSDAGYLCESQKFGELVMTKESKALMGLYHGQVLCKKNKFGAPQKD 360
PLKIIDVVKTGIEQGSDAGYLCESQKFGELVMTKESKALMGLYHGQVLCKKNKFGAPQKD
Sbjct: 301 PLKIIDVVKTGIEQGSDAGYLCESQKFGELVMTKESKALMGLYHGQVLCKKNKFGAPQKD 360
Query: 361 VKHLAILGAGLMGAGIAQVSVDKGLKTILKDATLTALDRGQQQVFKGLNDKVKKKALTSF 420
VKHLAILGAGLMGAGIAQVSVDKGLKTILKDATLTALDRGQQQVFKGLNDKVKKKALTSF
Sbjct: 361 VKHLAILGAGLMGAGIAQVSVDKGLKTILKDATLTALDRGQQQVFKGLNDKVKKKALTSF 420
Query: 421 ERDSIFSNLTGQLDYQGFEKADMVIEAVFEDLSLKHRVLKEVEAVIPDHCIFASNTSALP 480
ERDSIFSNLTGQLDYQGFEKADMVIEAVFEDLSLKHRVLKEVEAVIPDHCIFASNTSALP
Sbjct: 421 ERDSIFSNLTGQLDYQGFEKADMVIEAVFEDLSLKHRVLKEVEAVIPDHCIFASNTSALP 480
Query: 481 ISEIAAVSKRPEKVIGMHYFSPVDKMQLLEIITTEKTSKDTSASAVAVGLKQGKVIIVVK 540
ISEIAAVSKRPEKVIGMHYFSPVDKMQLLEIITTEKTSKDTSASAVAVGLKQGKVIIVVK
Sbjct: 481 ISEIAAVSKRPEKVIGMHYFSPVDKMQLLEIITTEKTSKDTSASAVAVGLKQGKVIIVVK 540
Query: 541 DGPGFYTTRCLAPMMSEVIRILQEGVDPKKLDSLTTSFGFPVGAATLVDEVGVDVAKHVA 600
DGPGFYTTRCLAPMMSEVIRILQEGVDPKKLDSLTTSFGFPVGAATLVDEVGVDVAKHVA
Sbjct: 541 DGPGFYTTRCLAPMMSEVIRILQEGVDPKKLDSLTTSFGFPVGAATLVDEVGVDVAKHVA 600
Query: 601 EDLGKVFGERFGGGNPELLTQMVSKGFLGRKSGKGFYIYQEGVKRKDLNSDMDSILASLK 660
EDLGKVFGERFGGGNPELLTQMVSKGFLGRKSGKGFYIYQEGVKRKDLNSDMDSILASLK
Sbjct: 601 EDLGKVFGERFGGGNPELLTQMVSKGFLGRKSGKGFYIYQEGVKRKDLNSDMDSILASLK 660
Query: 661 LPPKSEVSSDEDIQFRLVTRFVNEAVMCLQEGILATPAEGDIGAVFGLGFPPCLGGPFRF 720
LPPKSEVSSDEDIQFRLVTRFVNEAVMCLQEGILATPAEGDIGAVFGLGFPPCLGGPFRF
Sbjct: 661 LPPKSEVSSDEDIQFRLVTRFVNEAVMCLQEGILATPAEGDIGAVFGLGFPPCLGGPFRF 720
Query: 721 VDLYGAQKIVDRLKKYEAAYGKQFTPCQLLADHANSPNKKFYQ 763
VDLYGAQKIVDRLKKYEAAYGKQFTPCQLLADHANSPNKKFYQ
Sbjct: 721 VDLYGAQKIVDRLKKYEAAYGKQFTPCQLLADHANSPNKKFYQ 763
>gi|68989263 enoyl-Coenzyme A, hydratase/3-hydroxyacyl Coenzyme A
dehydrogenase [Homo sapiens]
Length = 723
Score = 284 bits (727), Expect = 2e-76
Identities = 217/714 (30%), Positives = 356/714 (49%), Gaps = 68/714 (9%)
Query: 49 VAVVRINSPNSKVNTLSKELHSEFSEVMNEIWASDQIRSAVLISSKPGCFIAGADINMLA 108
+A++R+ +P VN +S L + E + + I+ A++I G F AGADI +
Sbjct: 11 LALIRLRNP--PVNAISTTLLRDIKEGLQKAVIDHTIK-AIVICGAEGKFSAGADIRGFS 67
Query: 109 ACKTLQEVTQLSQEAQRIVEKLEKSTKPIVAAINGSCLGGGLEVAISCQYRIATKDRKTV 168
A +T +V++++++ KP+VAAI G GGGLE+A+ C YRIA + +
Sbjct: 68 APRTF------GLTLGHVVDEIQRNEKPVVAAIQGMAFGGGLELALGCHYRIAHAEAQ-- 119
Query: 169 LGTPEVLLGALPGAGGTQRLPKMVGVPAALDMMLTGRSIRADRAKKMGLVDQLVEPLGPG 228
+G PEV LG LPGA GTQ LP++ GVPAALD++ +GR I AD A K+G++D++V
Sbjct: 120 VGLPEVTLGLLPGARGTQLLPRLTGVPAALDLITSGRRILADEALKLGILDKVVNS---- 175
Query: 229 LKPPEERTIEYLEEVAITFAKGLADKKISPKRDKGLVEKLTAYAMTIPFVRQQVYKKVEE 288
P EE AI FA+ ++D+ + +R L K ++P + ++ +
Sbjct: 176 -DPVEE---------AIRFAQRVSDQPLESRR---LCNKPI---QSLPNM-DSIFSEALL 218
Query: 289 KVRKQTKGLYPAPLKIIDVVKTGIEQGSDAGYLCESQKFGELVMTKESKALMGLYHGQVL 348
K+R+Q G A + V+ ++ + G E + F L+ + +++AL + +
Sbjct: 219 KMRRQHPGCL-AQEACVRAVQAAVQYPYEVGIKKEEELFLYLLQSGQARALQYAFFAER- 276
Query: 349 CKKNKFGAPQ---------KDVKHLAILGAGLMGAGIAQVSVDKGLKTILKDATLTALDR 399
K NK+ P + V + ++G G MG GI + I D+ L
Sbjct: 277 -KANKWSTPSGASWKTASARPVSSVGVVGLGTMGRGIVISFARARIPVIAVDSDKNQLAT 335
Query: 400 GQQQVFKGLNDKVKKKALTSFERDSIFSNLTGQLDYQGFEKADMVIEAVFEDLSLKHRVL 459
+ + L + K + LT + G D+VIEAVFE++SLK +V
Sbjct: 336 ANKMITSVLEKEASKMQQSGHPWSGPKPRLTSSVKELG--GVDLVIEAVFEEMSLKKQVF 393
Query: 460 KEVEAVIPDHCIFASNTSALPISEIAAVSKRPEKVIGMHYFSPVDKMQLLEIITTEKTSK 519
E+ AV +NTSAL + EIA+ + RP VIG H+FSP M+LLE+I ++ +S
Sbjct: 394 AELSAVCKPEAFLCTNTSALDVDEIASSTDRPHLVIGTHFFSPAHVMKLLEVIPSQYSSP 453
Query: 520 DTSASAVAVGLKQGKVIIVVKDGPGFYTTRCLAPMMSEVIRILQEGVDPKKLDSLTTSFG 579
T A+ + + K K+ +VV + GF R L P ++ +L+EG P+++D + FG
Sbjct: 454 TTIATVMNLSKKIKKIGVVVGNCFGFVGNRMLNPYYNQAYFLLEEGSKPEEVDQVLEEFG 513
Query: 580 FPVGAATLVDEVGVDVAKHVAEDLGKVFGERFGG------GN------PELLTQMVSKGF 627
F +G + D G+DV + G G GN P++L ++ G
Sbjct: 514 FKMGPFRVSDLAGLDVGWKSRKGQGLTGPTLLPGTPARKRGNRRYCPIPDVLCEL---GR 570
Query: 628 LGRKSGKGFYIYQEGVKRKD-----LNSDMDSILASLKLPPKSEVSSDEDIQFRLVTRFV 682
G+K+GKG+Y Y + + R L+ + + + P++ +S DE ++ R + +
Sbjct: 571 FGQKTGKGWYQYDKPLGRIHKPDPWLSKFLSRYRKTHHIEPRT-ISQDEILE-RCLYSLI 628
Query: 683 NEAVMCLQEGILATPAEGDIGAVFGLGFPPCLGGPFRFVDLYGAQKIVDRLKKY 736
NEA L EGI A+P D+ + G G+P GGP + G ++++L+KY
Sbjct: 629 NEAFRILGEGIAASPEHIDVVYLHGYGWPRHKGGPMFYASTVGLPTVLEKLQKY 682
>gi|94557308 L-3-hydroxyacyl-Coenzyme A dehydrogenase precursor
[Homo sapiens]
Length = 314
Score = 162 bits (410), Expect = 1e-39
Identities = 98/289 (33%), Positives = 155/289 (53%), Gaps = 10/289 (3%)
Query: 361 VKHLAILGAGLMGAGIAQVSVDKGLKTILKDATLTALDRGQQQVFKGLNDKVKKKALTSF 420
VKH+ ++G GLMGAGIAQV+ G +L D T L + ++ + + L KKK +
Sbjct: 27 VKHVTVIGGGLMGAGIAQVAAATGHTVVLVDQTEDILAKSKKGIEESLRKVAKKKFAENL 86
Query: 421 ERDSIF-----SNLTGQLDYQGF-EKADMVIEAVFEDLSLKHRVLKEVEAVIPDHCIFAS 474
+ F S + D D+V+EA+ E+L +K+ + K ++ +H IFAS
Sbjct: 87 KAGDEFVEKTLSTIATSTDAASVVHSTDLVVEAIVENLKVKNELFKRLDKFAAEHTIFAS 146
Query: 475 NTSALPISEIAAVSKRPEKVIGMHYFSPVDKMQLLEIITTEKTSKDTSASAVAVGLKQGK 534
NTS+L I+ IA + R ++ G+H+F+PV M+L+E+I T TS+ T S V GK
Sbjct: 147 NTSSLQITSIANATTRQDRFAGLHFFNPVPVMKLVEVIKTPMTSQKTFESLVDFSKALGK 206
Query: 535 VIIVVKDGPGFYTTRCLAPMMSEVIRILQEGVDPKKLD---SLTTSFGFPVGAATLVDEV 591
+ KD PGF R L P + E IR+ + G D K D ++ G+P+G L+D V
Sbjct: 207 HPVSCKDTPGFIVNRLLVPYLMEAIRLYERG-DASKEDIDTAMKLGAGYPMGPFELLDYV 265
Query: 592 GVDVAKHVAEDLGKVFGERFGGGNPELLTQMVSKGFLGRKSGKGFYIYQ 640
G+D K + + ++ E L ++V++ G+K+G+GFY Y+
Sbjct: 266 GLDTTKFIVDGWHEMDAENPLHQPSPSLNKLVAENKFGKKTGEGFYKYK 314
>gi|4502327 AU RNA binding protein/enoyl-Coenzyme A hydratase
precursor [Homo sapiens]
Length = 339
Score = 109 bits (273), Expect = 8e-24
Identities = 72/233 (30%), Positives = 121/233 (51%), Gaps = 9/233 (3%)
Query: 49 VAVVRINSPNSKVNTLSKELHSEFSEVMNEIWASDQIRSAVLISSKPGCFIAGADINMLA 108
+ V+ IN K N+LSK L S+ ++ + + ++R+ ++ S PG F AGAD+ A
Sbjct: 89 IVVLGINRAYGK-NSLSKNLIKMLSKAVDALKSDKKVRTIIIRSEVPGIFCAGADLKERA 147
Query: 109 ACKTLQEVTQLSQEAQRIVEKLEKSTKPIVAAINGSCLGGGLEVAISCQYRIATKDRKTV 168
+ EV + + ++ + P +AAI+G LGGGLE+A++C R+A K
Sbjct: 148 KMSS-SEVGPFVSKIRAVINDIANLPVPTIAAIDGLALGGGLELALACDIRVAASSAK-- 204
Query: 169 LGTPEVLLGALPGAGGTQRLPKMVGVPAALDMMLTGRSIRADRAKKMGLVDQLVEPLGPG 228
+G E L +PG GGTQRLP+ +G+ A +++ + R + AK +GL+ ++E G
Sbjct: 205 MGLVETKLAIIPGGGGTQRLPRAIGMSLAKELIFSARVLDGKEAKAVGLISHVLEQNQEG 264
Query: 229 ---LKPPEERTIEYLEE--VAITFAKGLADKKISPKRDKGLVEKLTAYAMTIP 276
+ + E+L + VA+ AK ++ + GL + YA TIP
Sbjct: 265 DAAYRKALDLAREFLPQGPVAMRVAKLAINQGMEVDLVTGLAIEEACYAQTIP 317
>gi|194097323 mitochondrial short-chain enoyl-coenzyme A hydratase 1
precursor [Homo sapiens]
Length = 290
Score = 97.1 bits (240), Expect = 6e-20
Identities = 60/178 (33%), Positives = 96/178 (53%), Gaps = 7/178 (3%)
Query: 44 GVKGDVAVVRINSPNSKVNTLSKELHSEFSEVMNEIWASDQIRSAVLISSKPGCFIAGAD 103
G V ++++N P + +N L L E ++ + + + D A++++ F AGAD
Sbjct: 42 GKNNTVGLIQLNRPKA-LNALCDGLIDELNQAL-KTFEEDPAVGAIVLTGGDKAFAAGAD 99
Query: 104 INMLAACKTLQEVTQLSQEAQRIVEKLEKSTKPIVAAINGSCLGGGLEVAISCQYRIATK 163
I + + L S + + + L + KP++AA+NG GGG E+A+ C I
Sbjct: 100 IKEM---QNLSFQDCYSSKFLKHWDHLTQVKKPVIAAVNGYAFGGGCELAMMCD--IIYA 154
Query: 164 DRKTVLGTPEVLLGALPGAGGTQRLPKMVGVPAALDMMLTGRSIRADRAKKMGLVDQL 221
K PE+L+G +PGAGGTQRL + VG A++M+LTG I A AK+ GLV ++
Sbjct: 155 GEKAQFAQPEILIGTIPGAGGTQRLTRAVGKSLAMEMVLTGDRISAQDAKQAGLVSKI 212
>gi|70995211 peroxisomal enoyl-coenzyme A hydratase-like protein
[Homo sapiens]
Length = 328
Score = 77.4 bits (189), Expect = 5e-14
Identities = 57/182 (31%), Positives = 93/182 (51%), Gaps = 17/182 (9%)
Query: 52 VRINSPNSKVNTLSKELHSEFSEVMNEIWASDQIRSAVLISSKPGCFIAGADINMLAACK 111
V++N PN + N ++K E E N+I R AV+IS F AG D+ M A
Sbjct: 70 VQLNRPNKR-NAMNKVFWREMVECFNKISRDADCR-AVVISGAGKMFTAGIDL-MDMASD 126
Query: 112 TLQ----EVTQLSQEAQRIVEK-------LEKSTKPIVAAINGSCLGGGLEVAISCQYRI 160
LQ +V ++S + I+ + +E+ KP++AA++G C+GGG+++ +C R
Sbjct: 127 ILQPKGDDVARISWYLRDIITRYQETFNVIERCPKPVIAAVHGGCIGGGVDLVTACDIRY 186
Query: 161 ATKDRKTVLGTPEVLLGALPGAGGTQRLPKMVGVPAAL-DMMLTGRSIRADRAKKMGLVD 219
+D EV +G G QRLPK++G + + ++ T R + AD A GLV
Sbjct: 187 CAQD--AFFQVKEVDVGLAADVGTLQRLPKVIGNQSLVNELAFTARKMMADEALGSGLVS 244
Query: 220 QL 221
++
Sbjct: 245 RV 246
>gi|62530384 dodecenoyl-Coenzyme A delta isomerase precursor [Homo
sapiens]
Length = 302
Score = 73.2 bits (178), Expect = 9e-13
Identities = 51/174 (29%), Positives = 84/174 (48%), Gaps = 3/174 (1%)
Query: 49 VAVVRINSPNSKVNTLSKELHSEFSEVMNEIWASDQIRSAVLISSKPGCFIAGADINMLA 108
VAV++ +P VN+LS E +E + ++ R +L S +PG F AG D+ +
Sbjct: 57 VAVMKFKNP--PVNSLSLEFLTELVISLEKLENDKSFRGVILTSDRPGVFSAGLDLTEMC 114
Query: 109 ACKTLQEVTQLSQEAQRIVEKLEKSTKPIVAAINGSCLGGGLEVAISCQYRIATKDRKTV 168
++ + Q + +L +S +V+AING+C GG VA++C YRI + +
Sbjct: 115 G-RSPAHYAGYWKAVQELWLRLYQSNLVLVSAINGACPAGGCLVALTCDYRILADNPRYC 173
Query: 169 LGTPEVLLGALPGAGGTQRLPKMVGVPAALDMMLTGRSIRADRAKKMGLVDQLV 222
+G E LG + L +G AA + G A ++G+VDQ+V
Sbjct: 174 IGLNETQLGIIAPFWLKDTLENTIGHRAAERALQLGLLFPPAEALQVGIVDQVV 227
>gi|150378541 enoyl Coenzyme A hydratase domain containing 2 [Homo
sapiens]
Length = 261
Score = 68.6 bits (166), Expect = 2e-11
Identities = 71/275 (25%), Positives = 109/275 (39%), Gaps = 46/275 (16%)
Query: 9 ILSRFSAFRILRSRGYICRNFTGSSALLTRTHINYGVKGDVAVVRINSPNSKVNTLSKEL 68
+L +R LR+RG G S + R G + + +N P+++ N L
Sbjct: 4 VLCLLRPWRPLRARGCASDGAAGGSEIQVRALA--GPDQGITEILMNRPSAR-NALGNVF 60
Query: 69 HSEFSEVMNEIWASDQIRSAVLISSKPGCFIAGADINMLAACKTLQEVTQLSQ-EAQRIV 127
SE E + ++ Q+R + S G F AGAD L+E Q+S+ E V
Sbjct: 61 VSELLETLAQLREDRQVRVLLFRSGVKGVFCAGAD---------LKEREQMSEAEVGVFV 111
Query: 128 EKLEKSTKPIVAAINGSCLGGGLEVAISCQYRIATKDRKTVLGTPEVLLGALPGAGGTQR 187
++L I ++ V+G E G LPGAGGTQR
Sbjct: 112 QRLRGLMNDIASS--------------------------AVMGLIETTRGLLPGAGGTQR 145
Query: 188 LPKMVGVPAALDMMLTGRSIRADRAKKMGLVDQLVEPLGPGLKPPEERTIEYLEE----- 242
LP+ +GV A +++ TGR + A +GLV+ V G +R +E
Sbjct: 146 LPRCLGVALAKELIFTGRRLSGTEAHVLGLVNHAVAQNEEG-DAAYQRARALAQEILPQA 204
Query: 243 -VAITFAKGLADKKISPKRDKGLVEKLTAYAMTIP 276
+A+ K D+ G+ + YA IP
Sbjct: 205 PIAVRLGKVAIDRGTEVDIASGMAIEGMCYAQNIP 239
>gi|221307494 chromodomain protein, Y chromosome-like isoform a
[Homo sapiens]
Length = 544
Score = 66.6 bits (161), Expect = 8e-11
Identities = 47/176 (26%), Positives = 81/176 (46%), Gaps = 7/176 (3%)
Query: 52 VRINSPNSKVNTLSKELHSEFSEVMNEIWASDQIRSAVLISSKPGCFIAGADINMLAACK 111
+ +++ +S+ N+L+ E+ E ++ A D VL+S+ F G D
Sbjct: 301 ILLSTKSSENNSLNPEVMREVQSALSTAAADDS--KLVLLSAVGSVFCCGLDFIYFIRRL 358
Query: 112 T---LQEVTQLSQEAQRIVEKLEKSTKPIVAAINGSCLGGGLEVAISCQYRIATKDRKTV 168
T +E T++++ + V + KPI+ A+NG +G G + C + + K
Sbjct: 359 TDDRKRESTKMAEAIRNFVNTFIQFKKPIIVAVNGPAIGLGASILPLCD--VVWANEKAW 416
Query: 169 LGTPEVLLGALPGAGGTQRLPKMVGVPAALDMMLTGRSIRADRAKKMGLVDQLVEP 224
TP G P T PK++G +A +M+L+GR + A A GLV Q+ P
Sbjct: 417 FQTPYTTFGQSPDGCSTVMFPKIMGGASANEMLLSGRKLTAQEACGKGLVSQVFWP 472
>gi|221136756 chromodomain protein, Y chromosome-like isoform d
[Homo sapiens]
Length = 412
Score = 66.6 bits (161), Expect = 8e-11
Identities = 47/176 (26%), Positives = 81/176 (46%), Gaps = 7/176 (3%)
Query: 52 VRINSPNSKVNTLSKELHSEFSEVMNEIWASDQIRSAVLISSKPGCFIAGADINMLAACK 111
+ +++ +S+ N+L+ E+ E ++ A D VL+S+ F G D
Sbjct: 169 ILLSTKSSENNSLNPEVMREVQSALSTAAADDS--KLVLLSAVGSVFCCGLDFIYFIRRL 226
Query: 112 T---LQEVTQLSQEAQRIVEKLEKSTKPIVAAINGSCLGGGLEVAISCQYRIATKDRKTV 168
T +E T++++ + V + KPI+ A+NG +G G + C + + K
Sbjct: 227 TDDRKRESTKMAEAIRNFVNTFIQFKKPIIVAVNGPAIGLGASILPLCD--VVWANEKAW 284
Query: 169 LGTPEVLLGALPGAGGTQRLPKMVGVPAALDMMLTGRSIRADRAKKMGLVDQLVEP 224
TP G P T PK++G +A +M+L+GR + A A GLV Q+ P
Sbjct: 285 FQTPYTTFGQSPDGCSTVMFPKIMGGASANEMLLSGRKLTAQEACGKGLVSQVFWP 340
>gi|221136753 chromodomain protein, Y chromosome-like isoform d
[Homo sapiens]
Length = 412
Score = 66.6 bits (161), Expect = 8e-11
Identities = 47/176 (26%), Positives = 81/176 (46%), Gaps = 7/176 (3%)
Query: 52 VRINSPNSKVNTLSKELHSEFSEVMNEIWASDQIRSAVLISSKPGCFIAGADINMLAACK 111
+ +++ +S+ N+L+ E+ E ++ A D VL+S+ F G D
Sbjct: 169 ILLSTKSSENNSLNPEVMREVQSALSTAAADDS--KLVLLSAVGSVFCCGLDFIYFIRRL 226
Query: 112 T---LQEVTQLSQEAQRIVEKLEKSTKPIVAAINGSCLGGGLEVAISCQYRIATKDRKTV 168
T +E T++++ + V + KPI+ A+NG +G G + C + + K
Sbjct: 227 TDDRKRESTKMAEAIRNFVNTFIQFKKPIIVAVNGPAIGLGASILPLCD--VVWANEKAW 284
Query: 169 LGTPEVLLGALPGAGGTQRLPKMVGVPAALDMMLTGRSIRADRAKKMGLVDQLVEP 224
TP G P T PK++G +A +M+L+GR + A A GLV Q+ P
Sbjct: 285 FQTPYTTFGQSPDGCSTVMFPKIMGGASANEMLLSGRKLTAQEACGKGLVSQVFWP 340
>gi|37594469 3-hydroxyisobutyryl-Coenzyme A hydrolase isoform 2
[Homo sapiens]
Length = 338
Score = 63.9 bits (154), Expect = 5e-10
Identities = 55/218 (25%), Positives = 100/218 (45%), Gaps = 11/218 (5%)
Query: 9 ILSRFSAFRILRSRGYICRNFTGSSALLTRTHINYGVKGDVAVVRINSPNSKVNTLSKEL 68
++SRF+AF+ + I + S + KG V+ +N P +N L+ +
Sbjct: 9 LMSRFNAFKRTNT---ILHHLRMSKHTDAAEEVLLEKKGCTGVITLNRPKF-LNALTLNM 64
Query: 69 HSEFSEVMNEIWASDQIRSAVLISSKPG-CFIAGADINMLA-ACKTLQEVTQLS-QEAQR 125
+ + + W D ++I G F AG DI +++ A K Q++ + +E
Sbjct: 65 IRQIYPQLKK-WEQDPETFLIIIKGAGGKAFCAGGDIRVISEAEKAKQKIAPVFFREEYM 123
Query: 126 IVEKLEKSTKPIVAAINGSCLGGGLEVAISCQYRIATKDRKTVLGTPEVLLGALPGAGGT 185
+ + KP VA I+G +GGG+ +++ Q+R+AT+ K + PE +G P GG
Sbjct: 124 LNNAVGSCQKPYVALIHGITMGGGVGLSVHGQFRVATE--KCLFAMPETAIGLFPDVGGG 181
Query: 186 QRLPKMVGVPAALDMMLTGRSIRADRAKKMGLVDQLVE 223
LP++ G + LTG ++ + G+ V+
Sbjct: 182 YFLPRLQG-KLGYFLALTGFRLKGRDVYRAGIATHFVD 218
>gi|37594471 3-hydroxyisobutyryl-Coenzyme A hydrolase isoform 1
[Homo sapiens]
Length = 386
Score = 63.9 bits (154), Expect = 5e-10
Identities = 55/218 (25%), Positives = 100/218 (45%), Gaps = 11/218 (5%)
Query: 9 ILSRFSAFRILRSRGYICRNFTGSSALLTRTHINYGVKGDVAVVRINSPNSKVNTLSKEL 68
++SRF+AF+ + I + S + KG V+ +N P +N L+ +
Sbjct: 9 LMSRFNAFKRTNT---ILHHLRMSKHTDAAEEVLLEKKGCTGVITLNRPKF-LNALTLNM 64
Query: 69 HSEFSEVMNEIWASDQIRSAVLISSKPG-CFIAGADINMLA-ACKTLQEVTQLS-QEAQR 125
+ + + W D ++I G F AG DI +++ A K Q++ + +E
Sbjct: 65 IRQIYPQLKK-WEQDPETFLIIIKGAGGKAFCAGGDIRVISEAEKAKQKIAPVFFREEYM 123
Query: 126 IVEKLEKSTKPIVAAINGSCLGGGLEVAISCQYRIATKDRKTVLGTPEVLLGALPGAGGT 185
+ + KP VA I+G +GGG+ +++ Q+R+AT+ K + PE +G P GG
Sbjct: 124 LNNAVGSCQKPYVALIHGITMGGGVGLSVHGQFRVATE--KCLFAMPETAIGLFPDVGGG 181
Query: 186 QRLPKMVGVPAALDMMLTGRSIRADRAKKMGLVDQLVE 223
LP++ G + LTG ++ + G+ V+
Sbjct: 182 YFLPRLQG-KLGYFLALTGFRLKGRDVYRAGIATHFVD 218
>gi|157694516 enoyl Coenzyme A hydratase domain containing 1 isoform
1 [Homo sapiens]
Length = 301
Score = 62.8 bits (151), Expect = 1e-09
Identities = 45/204 (22%), Positives = 97/204 (47%), Gaps = 14/204 (6%)
Query: 49 VAVVRINSPNSKVNTLSKELHSEFSEVMNEI--WASDQIRSAVLISSKPGCFIAGADINM 106
+ ++ +N+P S++N S + + E + E+ W + +++ F +G+D+N
Sbjct: 58 IGILTLNNP-SRMNAFSGVMMLQLLEKVIELENWTEGK---GLIVRGAKNTFSSGSDLNA 113
Query: 107 LAACKTLQEVTQLSQEAQRIVEKLEKSTKPIVAAINGSCLGGGLEVAISCQYRIATKDRK 166
+ + T ++ + Q + + + VA + G LGGG E +C +R+ T + K
Sbjct: 114 VKSLGTPEDGMAVCMFMQNTLTRFMRLPLISVALVQGWALGGGAEFTTACDFRLMTPESK 173
Query: 167 TVLGTPEVLLGALPGAGGTQRLPKMVGVPAALDMMLTGRSIRADRAKKMGLVDQLVEPLG 226
E +G +P GGT RL +++G AL ++ + + A +G+V+++++
Sbjct: 174 IRFVHKE--MGIIPSWGGTTRLVEIIGSRQALKVLSGALKLDSKNALNIGMVEEVLQ--- 228
Query: 227 PGLKPPEERTIEYLEEVAITFAKG 250
E +++E +E F +G
Sbjct: 229 ---SSDETKSLEEAQEWLKQFIQG 249
>gi|213417737 enoyl Coenzyme A hydratase domain containing 1 isoform
5 [Homo sapiens]
Length = 307
Score = 62.8 bits (151), Expect = 1e-09
Identities = 45/204 (22%), Positives = 97/204 (47%), Gaps = 14/204 (6%)
Query: 49 VAVVRINSPNSKVNTLSKELHSEFSEVMNEI--WASDQIRSAVLISSKPGCFIAGADINM 106
+ ++ +N+P S++N S + + E + E+ W + +++ F +G+D+N
Sbjct: 64 IGILTLNNP-SRMNAFSGVMMLQLLEKVIELENWTEGK---GLIVRGAKNTFSSGSDLNA 119
Query: 107 LAACKTLQEVTQLSQEAQRIVEKLEKSTKPIVAAINGSCLGGGLEVAISCQYRIATKDRK 166
+ + T ++ + Q + + + VA + G LGGG E +C +R+ T + K
Sbjct: 120 VKSLGTPEDGMAVCMFMQNTLTRFMRLPLISVALVQGWALGGGAEFTTACDFRLMTPESK 179
Query: 167 TVLGTPEVLLGALPGAGGTQRLPKMVGVPAALDMMLTGRSIRADRAKKMGLVDQLVEPLG 226
E +G +P GGT RL +++G AL ++ + + A +G+V+++++
Sbjct: 180 IRFVHKE--MGIIPSWGGTTRLVEIIGSRQALKVLSGALKLDSKNALNIGMVEEVLQ--- 234
Query: 227 PGLKPPEERTIEYLEEVAITFAKG 250
E +++E +E F +G
Sbjct: 235 ---SSDETKSLEEAQEWLKQFIQG 255
>gi|116235487 chromodomain protein, Y-like 2 [Homo sapiens]
Length = 506
Score = 62.8 bits (151), Expect = 1e-09
Identities = 47/176 (26%), Positives = 77/176 (43%), Gaps = 7/176 (3%)
Query: 52 VRINSPNSKVNTLSKELHSEFSEVMNEIWASDQIRSAVLISSKPGCFIAGADINMLA--- 108
+ ++S S N L+ E+ E + D +L+S+ F +G D + L
Sbjct: 263 ILLSSQTSDNNALTPEIMKEVRRALCNAATDDS--KLLLLSAVGSVFCSGLDYSYLIGRL 320
Query: 109 ACKTLQEVTQLSQEAQRIVEKLEKSTKPIVAAINGSCLGGGLEVAISCQYRIATKDRKTV 168
+ +E T++++ + V+ + KPIV AING LG G + C I K
Sbjct: 321 SSDRRKESTRIAEAIRDFVKAFIQFKKPIVVAINGPALGLGASILPLCD--IVWASEKAW 378
Query: 169 LGTPEVLLGALPGAGGTQRLPKMVGVPAALDMMLTGRSIRADRAKKMGLVDQLVEP 224
TP + P + P+++GV A +M+ GR + A A GLV Q+ P
Sbjct: 379 FQTPYATIRLTPAGCSSYTFPQILGVALANEMLFCGRKLTAQEACSRGLVSQVFWP 434
>gi|115430219 lambda-crystallin [Homo sapiens]
Length = 319
Score = 61.2 bits (147), Expect = 3e-09
Identities = 60/220 (27%), Positives = 104/220 (47%), Gaps = 18/220 (8%)
Query: 364 LAILGAGLMGAGIAQVSVDKGLKTILKDATLTALDRGQQQVFKGLNDKVKKKALT----- 418
+ I+G+G++G A + G + L D QQQ+ L + K+ L
Sbjct: 9 VVIVGSGVIGRSWAMLFASGGFQVKLYDIE-------QQQIRNALENIRKEMKLLEQAGS 61
Query: 419 ---SFERDSIFSNLTGQLDYQ-GFEKADMVIEAVFEDLSLKHRVLKEVEAVIPDHCIFAS 474
S + S ++G + Q E A + E V EDL LK ++ +++++I D I +S
Sbjct: 62 LKGSLSVEEQLSLISGCPNIQEAVEGAMHIQECVPEDLELKKKIFAQLDSIIDDRVILSS 121
Query: 475 NTSALPISEIAAVSKRPEKVIGMHYFSPVDKMQLLEIITTEKTSKDTSASAVAVGLKQGK 534
+TS L S++ A ++ I H +P + L+E++ +T+ T A+ K G+
Sbjct: 122 STSCLMPSKLFAGLVHVKQCIVAHPVNPPYYIPLVELVPHPETAPTTVDRTHALMKKIGQ 181
Query: 535 VII-VVKDGPGFYTTRCLAPMMSEVIRILQEG-VDPKKLD 572
+ V K+ GF R ++SE R+++EG V P LD
Sbjct: 182 CPMRVQKEVAGFVLNRLQYAIISEAWRLVEEGIVSPSDLD 221
>gi|31542718 enoyl Coenzyme A hydratase domain containing 3 [Homo
sapiens]
Length = 303
Score = 59.7 bits (143), Expect = 1e-08
Identities = 59/223 (26%), Positives = 102/223 (45%), Gaps = 23/223 (10%)
Query: 60 KVNTLSKE-LHSEFSEVMNEIWASDQIRSAVLISSKPGCFIAGADINMLAACKTLQEVTQ 118
K NTLS L S S+++++ ++D ++IS++ F +G D+ L + +
Sbjct: 66 KRNTLSLAMLKSLQSDILHDADSNDL--KVIIISAEGPVFSSGHDLKELTEEQGRDYHAE 123
Query: 119 LSQEAQRIVEKLEKSTKPIVAAINGSCLGGGLEVAISCQYRIATKDRKTVLGTPEVLLG- 177
+ Q +++ + P++A +NG G ++ SC IA K+ TP V +G
Sbjct: 124 VFQTCSKVMMHIRNHPVPVIAMVNGLATAAGCQLVASCD--IAVASDKSSFATPGVNVGL 181
Query: 178 --ALPGAGGTQRLPKMVGVPAALDMMLTGRSIRADRAKKMGLVDQLVEPLGPGLKPPEE- 234
+ PG + +P+ V AL+M+ TG I A A GL+ ++V P + EE
Sbjct: 182 FCSTPGVALARAVPRKV----ALEMLFTGEPISAQEALLHGLLSKVV----PEAELQEET 233
Query: 235 ----RTIEYLEEVAITFAKGLADKKISPKRDKGLVEKLTAYAM 273
R I L ++ K K++ +D G LT+ AM
Sbjct: 234 MRIARKIASLSRPVVSLGKATFYKQL--PQDLGTAYYLTSQAM 274
>gi|157694520 enoyl Coenzyme A hydratase domain containing 1 isoform
3 [Homo sapiens]
Length = 226
Score = 57.8 bits (138), Expect = 4e-08
Identities = 37/162 (22%), Positives = 77/162 (47%), Gaps = 8/162 (4%)
Query: 89 VLISSKPGCFIAGADINMLAACKTLQEVTQLSQEAQRIVEKLEKSTKPIVAAINGSCLGG 148
+++ F +G+D+N + + T ++ + Q + + + VA + G LGG
Sbjct: 21 LIVRGAKNTFSSGSDLNAVKSLGTPEDGMAVCMFMQNTLTRFMRLPLISVALVQGWALGG 80
Query: 149 GLEVAISCQYRIATKDRKTVLGTPEVLLGALPGAGGTQRLPKMVGVPAALDMMLTGRSIR 208
G E +C +R+ T + K E +G +P GGT RL +++G AL ++ +
Sbjct: 81 GAEFTTACDFRLMTPESKIRFVHKE--MGIIPSWGGTTRLVEIIGSRQALKVLSGALKLD 138
Query: 209 ADRAKKMGLVDQLVEPLGPGLKPPEERTIEYLEEVAITFAKG 250
+ A +G+V+++++ E +++E +E F +G
Sbjct: 139 SKNALNIGMVEEVLQ------SSDETKSLEEAQEWLKQFIQG 174
>gi|4757966 Y chromosome chromodomain protein 1, telomeric isoform b
[Homo sapiens]
Length = 554
Score = 57.0 bits (136), Expect = 6e-08
Identities = 43/171 (25%), Positives = 71/171 (41%), Gaps = 7/171 (4%)
Query: 54 INSPNSKVNTLSKELHSEFSEVMNEIWASDQIRSAVLISSKPGCFIAGADINMLAACKTL 113
+++ +++ N L+ E+ E +N A D VL S+ F G D
Sbjct: 299 LSTRSTEKNALNTEVIKEIVNALNSAAADDS--KLVLFSAAGSVFCCGLDFGYFVKHLRN 356
Query: 114 QEVT---QLSQEAQRIVEKLEKSTKPIVAAINGSCLGGGLEVAISCQYRIATKDRKTVLG 170
T ++ + V + KPIV ++NG +G G + C + + K
Sbjct: 357 NRNTASLEMVDTIKNFVNTFIQFKKPIVVSVNGPAIGLGASILPLCD--LVWANEKAWFQ 414
Query: 171 TPEVLLGALPGAGGTQRLPKMVGVPAALDMMLTGRSIRADRAKKMGLVDQL 221
TP G P + PKM+G +A +M++ GR + A A GLV Q+
Sbjct: 415 TPYTTFGQSPDGCSSITFPKMMGKASANEMLIAGRKLTAREACAKGLVSQV 465
>gi|25453481 Y chromosome chromodomain protein 1, telomeric isoform
a [Homo sapiens]
Length = 540
Score = 57.0 bits (136), Expect = 6e-08
Identities = 43/171 (25%), Positives = 71/171 (41%), Gaps = 7/171 (4%)
Query: 54 INSPNSKVNTLSKELHSEFSEVMNEIWASDQIRSAVLISSKPGCFIAGADINMLAACKTL 113
+++ +++ N L+ E+ E +N A D VL S+ F G D
Sbjct: 299 LSTRSTEKNALNTEVIKEIVNALNSAAADDS--KLVLFSAAGSVFCCGLDFGYFVKHLRN 356
Query: 114 QEVT---QLSQEAQRIVEKLEKSTKPIVAAINGSCLGGGLEVAISCQYRIATKDRKTVLG 170
T ++ + V + KPIV ++NG +G G + C + + K
Sbjct: 357 NRNTASLEMVDTIKNFVNTFIQFKKPIVVSVNGPAIGLGASILPLCD--LVWANEKAWFQ 414
Query: 171 TPEVLLGALPGAGGTQRLPKMVGVPAALDMMLTGRSIRADRAKKMGLVDQL 221
TP G P + PKM+G +A +M++ GR + A A GLV Q+
Sbjct: 415 TPYTTFGQSPDGCSSITFPKMMGKASANEMLIAGRKLTAREACAKGLVSQV 465
>gi|51538581 chromodomain protein, Y-linked, 1B isoform b [Homo
sapiens]
Length = 554
Score = 57.0 bits (136), Expect = 6e-08
Identities = 43/171 (25%), Positives = 71/171 (41%), Gaps = 7/171 (4%)
Query: 54 INSPNSKVNTLSKELHSEFSEVMNEIWASDQIRSAVLISSKPGCFIAGADINMLAACKTL 113
+++ +++ N L+ E+ E +N A D VL S+ F G D
Sbjct: 299 LSTRSTEKNALNTEVIKEIVNALNSAAADDS--KLVLFSAAGSVFCCGLDFGYFVKHLRN 356
Query: 114 QEVT---QLSQEAQRIVEKLEKSTKPIVAAINGSCLGGGLEVAISCQYRIATKDRKTVLG 170
T ++ + V + KPIV ++NG +G G + C + + K
Sbjct: 357 NRNTASLEMVDTIKNFVNTFIQFKKPIVVSVNGPAIGLGASILPLCD--LVWANEKAWFQ 414
Query: 171 TPEVLLGALPGAGGTQRLPKMVGVPAALDMMLTGRSIRADRAKKMGLVDQL 221
TP G P + PKM+G +A +M++ GR + A A GLV Q+
Sbjct: 415 TPYTTFGQSPDGCSSITFPKMMGKASANEMLIAGRKLTAREACAKGLVSQV 465
>gi|51538573 chromodomain protein, Y-linked, 1B isoform a [Homo
sapiens]
Length = 540
Score = 57.0 bits (136), Expect = 6e-08
Identities = 43/171 (25%), Positives = 71/171 (41%), Gaps = 7/171 (4%)
Query: 54 INSPNSKVNTLSKELHSEFSEVMNEIWASDQIRSAVLISSKPGCFIAGADINMLAACKTL 113
+++ +++ N L+ E+ E +N A D VL S+ F G D
Sbjct: 299 LSTRSTEKNALNTEVIKEIVNALNSAAADDS--KLVLFSAAGSVFCCGLDFGYFVKHLRN 356
Query: 114 QEVT---QLSQEAQRIVEKLEKSTKPIVAAINGSCLGGGLEVAISCQYRIATKDRKTVLG 170
T ++ + V + KPIV ++NG +G G + C + + K
Sbjct: 357 NRNTASLEMVDTIKNFVNTFIQFKKPIVVSVNGPAIGLGASILPLCD--LVWANEKAWFQ 414
Query: 171 TPEVLLGALPGAGGTQRLPKMVGVPAALDMMLTGRSIRADRAKKMGLVDQL 221
TP G P + PKM+G +A +M++ GR + A A GLV Q+
Sbjct: 415 TPYTTFGQSPDGCSSITFPKMMGKASANEMLIAGRKLTAREACAKGLVSQV 465
>gi|49355787 Y chromosome chromodomain protein 2B [Homo sapiens]
Length = 541
Score = 57.0 bits (136), Expect = 6e-08
Identities = 43/171 (25%), Positives = 71/171 (41%), Gaps = 7/171 (4%)
Query: 54 INSPNSKVNTLSKELHSEFSEVMNEIWASDQIRSAVLISSKPGCFIAGADINMLAACKTL 113
+++ +++ N L+ E+ E +N A D VL S+ F G D
Sbjct: 300 LSTRSTEKNALNTEVIKEMVNALNSAAADDS--KLVLFSAAGSVFCCGLDFGYFVRHLRN 357
Query: 114 QEVT---QLSQEAQRIVEKLEKSTKPIVAAINGSCLGGGLEVAISCQYRIATKDRKTVLG 170
T ++ + V + KPIV ++NG +G G + C + + K
Sbjct: 358 DRNTASLEMVDTIKNFVNTFIQFKKPIVVSVNGPAIGLGASILPLCD--LVWANEKAWFQ 415
Query: 171 TPEVLLGALPGAGGTQRLPKMVGVPAALDMMLTGRSIRADRAKKMGLVDQL 221
TP G P + PKM+G +A +M++ GR + A A GLV Q+
Sbjct: 416 TPYTTFGQSPDGCSSITFPKMMGKASANEMLIAGRKLTAREACAKGLVSQV 466
>gi|4757968 Y chromosome chromodomain protein 2A [Homo sapiens]
Length = 541
Score = 57.0 bits (136), Expect = 6e-08
Identities = 43/171 (25%), Positives = 71/171 (41%), Gaps = 7/171 (4%)
Query: 54 INSPNSKVNTLSKELHSEFSEVMNEIWASDQIRSAVLISSKPGCFIAGADINMLAACKTL 113
+++ +++ N L+ E+ E +N A D VL S+ F G D
Sbjct: 300 LSTRSTEKNALNTEVIKEMVNALNSAAADDS--KLVLFSAAGSVFCCGLDFGYFVRHLRN 357
Query: 114 QEVT---QLSQEAQRIVEKLEKSTKPIVAAINGSCLGGGLEVAISCQYRIATKDRKTVLG 170
T ++ + V + KPIV ++NG +G G + C + + K
Sbjct: 358 DRNTASLEMVDTIKNFVNTFIQFKKPIVVSVNGPAIGLGASILPLCD--LVWANEKAWFQ 415
Query: 171 TPEVLLGALPGAGGTQRLPKMVGVPAALDMMLTGRSIRADRAKKMGLVDQL 221
TP G P + PKM+G +A +M++ GR + A A GLV Q+
Sbjct: 416 TPYTTFGQSPDGCSSITFPKMMGKASANEMLIAGRKLTAREACAKGLVSQV 466
>gi|45643121 peroxisomal D3,D2-enoyl-CoA isomerase isoform 2 [Homo
sapiens]
Length = 227
Score = 38.1 bits (87), Expect = 0.031
Identities = 22/87 (25%), Positives = 40/87 (45%), Gaps = 2/87 (2%)
Query: 135 KPIVAAINGSCLGGGLEVAISCQYRIATKDRKTVLGTPEVLLGALPGAGGTQRLPKMVGV 194
KP++A +NG +G + V + + + TP LG P + PK++
Sbjct: 69 KPLIAVVNGPAVG--ISVTLLGLFDAVYASDRATFHTPFSHLGQSPEGCSSYTFPKIMSP 126
Query: 195 PAALDMMLTGRSIRADRAKKMGLVDQL 221
A +M++ G+ + A A GLV ++
Sbjct: 127 AKATEMLIFGKKLTAGEACAQGLVTEV 153
>gi|45643119 peroxisomal D3,D2-enoyl-CoA isomerase isoform 1 [Homo
sapiens]
Length = 364
Score = 38.1 bits (87), Expect = 0.031
Identities = 22/87 (25%), Positives = 40/87 (45%), Gaps = 2/87 (2%)
Query: 135 KPIVAAINGSCLGGGLEVAISCQYRIATKDRKTVLGTPEVLLGALPGAGGTQRLPKMVGV 194
KP++A +NG +G + V + + + TP LG P + PK++
Sbjct: 206 KPLIAVVNGPAVG--ISVTLLGLFDAVYASDRATFHTPFSHLGQSPEGCSSYTFPKIMSP 263
Query: 195 PAALDMMLTGRSIRADRAKKMGLVDQL 221
A +M++ G+ + A A GLV ++
Sbjct: 264 AKATEMLIFGKKLTAGEACAQGLVTEV 290
>gi|217330559 unc-51-like kinase 2 [Homo sapiens]
Length = 1036
Score = 35.4 bits (80), Expect = 0.20
Identities = 34/119 (28%), Positives = 50/119 (42%), Gaps = 9/119 (7%)
Query: 512 ITTEKTSKDTSASAVAVGLKQGKVIIVVKDGPGFYTTRCLAPMMSEVIRILQEGVDPKKL 571
+ T TS S S ++ G+V + GPGF ++ A +R + G P L
Sbjct: 744 LRTRTTSVGPSNSGGSLCAMSGRVCVGSPPGPGFGSSPPGAEAAPS-LRYVPYGASPPSL 802
Query: 572 DSLTTSFGFPVGAATLVDEVGVDVAKHVAEDLGKVFGE------RFGGGNPELLTQMVS 624
+ L T + TL++ D +H+ L +F E GGNPEL T VS
Sbjct: 803 EGLITFEAPELPEETLMEREHTDTLRHLNVML--MFTECVLDLTAMRGGNPELCTSAVS 859
>gi|217330557 unc-51-like kinase 2 [Homo sapiens]
Length = 1036
Score = 35.4 bits (80), Expect = 0.20
Identities = 34/119 (28%), Positives = 50/119 (42%), Gaps = 9/119 (7%)
Query: 512 ITTEKTSKDTSASAVAVGLKQGKVIIVVKDGPGFYTTRCLAPMMSEVIRILQEGVDPKKL 571
+ T TS S S ++ G+V + GPGF ++ A +R + G P L
Sbjct: 744 LRTRTTSVGPSNSGGSLCAMSGRVCVGSPPGPGFGSSPPGAEAAPS-LRYVPYGASPPSL 802
Query: 572 DSLTTSFGFPVGAATLVDEVGVDVAKHVAEDLGKVFGE------RFGGGNPELLTQMVS 624
+ L T + TL++ D +H+ L +F E GGNPEL T VS
Sbjct: 803 EGLITFEAPELPEETLMEREHTDTLRHLNVML--MFTECVLDLTAMRGGNPELCTSAVS 859
>gi|207028821 RNA binding motif protein 44 [Homo sapiens]
Length = 1052
Score = 32.7 bits (73), Expect = 1.3
Identities = 28/95 (29%), Positives = 45/95 (47%), Gaps = 23/95 (24%)
Query: 53 RINSPNSKVNTLSKELHSEF--------------SEVMNEIWASD--------QIRSAVL 90
RI+S N + +T +K++HSEF SE +E++ SD QI SA L
Sbjct: 919 RISSNNLEKST-NKQIHSEFSISRLPRTRPRQLGSEQDSEVFPSDQGVKKNCKQIESAKL 977
Query: 91 ISSKPGCFIAGADINMLAACKTLQEVTQLSQEAQR 125
+ P FI +N+ + K ++ + +L E R
Sbjct: 978 LPDTPVQFIPPNTLNLRSFTKIIKRLAELHPEVSR 1012
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.136 0.385
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 27,301,052
Number of Sequences: 37866
Number of extensions: 1201161
Number of successful extensions: 2853
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 2784
Number of HSP's gapped (non-prelim): 40
length of query: 763
length of database: 18,247,518
effective HSP length: 110
effective length of query: 653
effective length of database: 14,082,258
effective search space: 9195714474
effective search space used: 9195714474
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 66 (30.0 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.