Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 20070264
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|20070264 erlectin isoform 1 [Homo sapiens]
(483 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|20070264 erlectin isoform 1 [Homo sapiens] 1009 0.0
gi|188528696 erlectin isoform 2 [Homo sapiens] 941 0.0
gi|188528698 erlectin isoform 3 [Homo sapiens] 611 e-175
gi|63252870 osteosarcoma amplified 9 isoform 4 precursor [Homo s... 96 7e-20
gi|63252868 osteosarcoma amplified 9 isoform 3 precursor [Homo s... 96 7e-20
gi|63252866 osteosarcoma amplified 9 isoform 2 precursor [Homo s... 96 7e-20
gi|5803109 osteosarcoma amplified 9 isoform 1 precursor [Homo sa... 96 7e-20
gi|14249738 N-acetylglucosamine-1-phosphotransferase, gamma subu... 43 6e-04
gi|226246554 hypothetical protein LOC643677 [Homo sapiens] 35 0.20
gi|239756039 PREDICTED: hypothetical protein LOC643677 [Homo sap... 35 0.20
gi|239750569 PREDICTED: hypothetical protein LOC643677 [Homo sap... 35 0.20
gi|239744870 PREDICTED: hypothetical protein LOC643677 [Homo sap... 35 0.20
gi|48255891 protein kinase C substrate 80K-H isoform 2 [Homo sap... 33 0.44
gi|48255889 protein kinase C substrate 80K-H isoform 1 [Homo sap... 33 0.44
gi|114431236 zinc finger protein 462 [Homo sapiens] 33 0.75
gi|14249340 phospholipase C, delta 4 [Homo sapiens] 32 1.3
gi|239753102 PREDICTED: hypothetical protein [Homo sapiens] 31 2.9
gi|221136848 neuroblastoma breakpoint family, member 6 isoform 2... 30 6.4
gi|221136844 neuroblastoma breakpoint family, member 6 isoform 1... 30 6.4
gi|221218991 neuroblastoma breakpoint family, member 4 [Homo sap... 30 6.4
gi|48762732 phosphodiesterase 9A isoform h [Homo sapiens] 30 6.4
gi|28395045 Bardet-Biedl syndrome 1 [Homo sapiens] 30 6.4
gi|18375528 UPF3 regulator of nonsense transcripts homolog B iso... 30 6.4
gi|16933557 dachsous 1 precursor [Homo sapiens] 30 6.4
gi|90903231 huntingtin [Homo sapiens] 29 8.3
gi|126090663 zinc finger homeodomain 4 [Homo sapiens] 29 8.3
gi|171460958 nucleolar protein 10 [Homo sapiens] 29 8.3
gi|116174778 centrosome spindle pole associated protein 1 isofor... 29 8.3
gi|116174789 centrosome spindle pole associated protein 1 isofor... 29 8.3
>gi|20070264 erlectin isoform 1 [Homo sapiens]
Length = 483
Score = 1009 bits (2610), Expect = 0.0
Identities = 483/483 (100%), Positives = 483/483 (100%)
Query: 1 MEEGGGGVRSLVPGGPVLLVLCGLLEASGGGRALPQLSDDIPFRVNWPGTEFSLPTTGVL 60
MEEGGGGVRSLVPGGPVLLVLCGLLEASGGGRALPQLSDDIPFRVNWPGTEFSLPTTGVL
Sbjct: 1 MEEGGGGVRSLVPGGPVLLVLCGLLEASGGGRALPQLSDDIPFRVNWPGTEFSLPTTGVL 60
Query: 61 YKEDNYVIMTTAHKEKYKCILPLVTSGDEEEEKDYKGPNPRELLEPLFKQSSCSYRIESY 120
YKEDNYVIMTTAHKEKYKCILPLVTSGDEEEEKDYKGPNPRELLEPLFKQSSCSYRIESY
Sbjct: 61 YKEDNYVIMTTAHKEKYKCILPLVTSGDEEEEKDYKGPNPRELLEPLFKQSSCSYRIESY 120
Query: 121 WTYEVCHGKHIRQYHEEKETGQKINIHEYYLGNMLAKNLLFEKEREAEEKEKSNEIPTKN 180
WTYEVCHGKHIRQYHEEKETGQKINIHEYYLGNMLAKNLLFEKEREAEEKEKSNEIPTKN
Sbjct: 121 WTYEVCHGKHIRQYHEEKETGQKINIHEYYLGNMLAKNLLFEKEREAEEKEKSNEIPTKN 180
Query: 181 IEGQMTPYYPVGMGNGTPCSLKQNRPRSSTVMYICHPESKHEILSVAEVTTCEYEVVILT 240
IEGQMTPYYPVGMGNGTPCSLKQNRPRSSTVMYICHPESKHEILSVAEVTTCEYEVVILT
Sbjct: 181 IEGQMTPYYPVGMGNGTPCSLKQNRPRSSTVMYICHPESKHEILSVAEVTTCEYEVVILT 240
Query: 241 PLLCSHPKYRFRASPVNDIFCQSLPGSPFKPLTLRQLEQQEEILRVPFRRNKEEDLQSTK 300
PLLCSHPKYRFRASPVNDIFCQSLPGSPFKPLTLRQLEQQEEILRVPFRRNKEEDLQSTK
Sbjct: 241 PLLCSHPKYRFRASPVNDIFCQSLPGSPFKPLTLRQLEQQEEILRVPFRRNKEEDLQSTK 300
Query: 301 EERFPAIHKSIAIGSQPVLTVGTTHISKLTDDQLIKEFLSGSYCFRGGVGWWKYEFCYGK 360
EERFPAIHKSIAIGSQPVLTVGTTHISKLTDDQLIKEFLSGSYCFRGGVGWWKYEFCYGK
Sbjct: 301 EERFPAIHKSIAIGSQPVLTVGTTHISKLTDDQLIKEFLSGSYCFRGGVGWWKYEFCYGK 360
Query: 361 HVHQYHEDKDSGKTSVVVGTWNQEEHIEWAKKNTARAYHLQDDGTQTVRMVSHFYGNGDI 420
HVHQYHEDKDSGKTSVVVGTWNQEEHIEWAKKNTARAYHLQDDGTQTVRMVSHFYGNGDI
Sbjct: 361 HVHQYHEDKDSGKTSVVVGTWNQEEHIEWAKKNTARAYHLQDDGTQTVRMVSHFYGNGDI 420
Query: 421 CDITDKPRQVTVKLKCKESDSPHAVTVYMLEPHSCQYILGVESPVICKILDTADENGLLS 480
CDITDKPRQVTVKLKCKESDSPHAVTVYMLEPHSCQYILGVESPVICKILDTADENGLLS
Sbjct: 421 CDITDKPRQVTVKLKCKESDSPHAVTVYMLEPHSCQYILGVESPVICKILDTADENGLLS 480
Query: 481 LPN 483
LPN
Sbjct: 481 LPN 483
>gi|188528696 erlectin isoform 2 [Homo sapiens]
Length = 457
Score = 941 bits (2432), Expect = 0.0
Identities = 457/483 (94%), Positives = 457/483 (94%), Gaps = 26/483 (5%)
Query: 1 MEEGGGGVRSLVPGGPVLLVLCGLLEASGGGRALPQLSDDIPFRVNWPGTEFSLPTTGVL 60
MEEGGGGVRSLVPGGPVLLVLCGLLEASGGGRALPQLSDDIPFRVNWPGTEFSLPTTGVL
Sbjct: 1 MEEGGGGVRSLVPGGPVLLVLCGLLEASGGGRALPQLSDDIPFRVNWPGTEFSLPTTGVL 60
Query: 61 YKEDNYVIMTTAHKEKYKCILPLVTSGDEEEEKDYKGPNPRELLEPLFKQSSCSYRIESY 120
YKEDNYVIMTTAHKEKYKCILPLVTSGDEEEEKDYKGPNPRELLEPLFKQSSCSYRIESY
Sbjct: 61 YKEDNYVIMTTAHKEKYKCILPLVTSGDEEEEKDYKGPNPRELLEPLFKQSSCSYRIESY 120
Query: 121 WTYEVCHGKHIRQYHEEKETGQKINIHEYYLGNMLAKNLLFEKEREAEEKEKSNEIPTKN 180
WTYEVCHGKHIRQYHEEKETGQKINIHEYYLGNMLAKNLLFEKEREAEEKEKSNEIPTKN
Sbjct: 121 WTYEVCHGKHIRQYHEEKETGQKINIHEYYLGNMLAKNLLFEKEREAEEKEKSNEIPTKN 180
Query: 181 IEGQMTPYYPVGMGNGTPCSLKQNRPRSSTVMYICHPESKHEILSVAEVTTCEYEVVILT 240
IEGQMTPYYPVGMGNGTPCSLKQNRPRSSTVMYICHPESKHEILSVAEVTTCEYEVVILT
Sbjct: 181 IEGQMTPYYPVGMGNGTPCSLKQNRPRSSTVMYICHPESKHEILSVAEVTTCEYEVVILT 240
Query: 241 PLLCSHPKYRFRASPVNDIFCQSLPGSPFKPLTLRQLEQQEEILRVPFRRNKEEDLQSTK 300
PLLCSHPKYRFRASPVNDIFCQSLPGSPFKPLTLRQLEQQEEILRVPFRRNKEEDLQSTK
Sbjct: 241 PLLCSHPKYRFRASPVNDIFCQSLPGSPFKPLTLRQLEQQEEILRVPFRRNKEEDLQSTK 300
Query: 301 EERFPAIHKSIAIGSQPVLTVGTTHISKLTDDQLIKEFLSGSYCFRGGVGWWKYEFCYGK 360
EERFPAIHKSIAIGSQPVLTVGTTHISKLTDDQLIKEFLSGSYCFRGGVGWWKYEFCYGK
Sbjct: 301 EERFPAIHKSIAIGSQPVLTVGTTHISKLTDDQLIKEFLSGSYCFRGGVGWWKYEFCYGK 360
Query: 361 HVHQYHEDKDSGKTSVVVGTWNQEEHIEWAKKNTARAYHLQDDGTQTVRMVSHFYGNGDI 420
HVHQYHEDKDSGKTSVVVGTWNQEEHIEWAKKNTARAYHLQDDGTQTVR
Sbjct: 361 HVHQYHEDKDSGKTSVVVGTWNQEEHIEWAKKNTARAYHLQDDGTQTVR----------- 409
Query: 421 CDITDKPRQVTVKLKCKESDSPHAVTVYMLEPHSCQYILGVESPVICKILDTADENGLLS 480
CKESDSPHAVTVYMLEPHSCQYILGVESPVICKILDTADENGLLS
Sbjct: 410 ---------------CKESDSPHAVTVYMLEPHSCQYILGVESPVICKILDTADENGLLS 454
Query: 481 LPN 483
LPN
Sbjct: 455 LPN 457
>gi|188528698 erlectin isoform 3 [Homo sapiens]
Length = 429
Score = 611 bits (1575), Expect = e-175
Identities = 293/293 (100%), Positives = 293/293 (100%)
Query: 1 MEEGGGGVRSLVPGGPVLLVLCGLLEASGGGRALPQLSDDIPFRVNWPGTEFSLPTTGVL 60
MEEGGGGVRSLVPGGPVLLVLCGLLEASGGGRALPQLSDDIPFRVNWPGTEFSLPTTGVL
Sbjct: 1 MEEGGGGVRSLVPGGPVLLVLCGLLEASGGGRALPQLSDDIPFRVNWPGTEFSLPTTGVL 60
Query: 61 YKEDNYVIMTTAHKEKYKCILPLVTSGDEEEEKDYKGPNPRELLEPLFKQSSCSYRIESY 120
YKEDNYVIMTTAHKEKYKCILPLVTSGDEEEEKDYKGPNPRELLEPLFKQSSCSYRIESY
Sbjct: 61 YKEDNYVIMTTAHKEKYKCILPLVTSGDEEEEKDYKGPNPRELLEPLFKQSSCSYRIESY 120
Query: 121 WTYEVCHGKHIRQYHEEKETGQKINIHEYYLGNMLAKNLLFEKEREAEEKEKSNEIPTKN 180
WTYEVCHGKHIRQYHEEKETGQKINIHEYYLGNMLAKNLLFEKEREAEEKEKSNEIPTKN
Sbjct: 121 WTYEVCHGKHIRQYHEEKETGQKINIHEYYLGNMLAKNLLFEKEREAEEKEKSNEIPTKN 180
Query: 181 IEGQMTPYYPVGMGNGTPCSLKQNRPRSSTVMYICHPESKHEILSVAEVTTCEYEVVILT 240
IEGQMTPYYPVGMGNGTPCSLKQNRPRSSTVMYICHPESKHEILSVAEVTTCEYEVVILT
Sbjct: 181 IEGQMTPYYPVGMGNGTPCSLKQNRPRSSTVMYICHPESKHEILSVAEVTTCEYEVVILT 240
Query: 241 PLLCSHPKYRFRASPVNDIFCQSLPGSPFKPLTLRQLEQQEEILRVPFRRNKE 293
PLLCSHPKYRFRASPVNDIFCQSLPGSPFKPLTLRQLEQQEEILRVPFRRNKE
Sbjct: 241 PLLCSHPKYRFRASPVNDIFCQSLPGSPFKPLTLRQLEQQEEILRVPFRRNKE 293
Score = 296 bits (759), Expect = 2e-80
Identities = 136/136 (100%), Positives = 136/136 (100%)
Query: 348 GVGWWKYEFCYGKHVHQYHEDKDSGKTSVVVGTWNQEEHIEWAKKNTARAYHLQDDGTQT 407
GVGWWKYEFCYGKHVHQYHEDKDSGKTSVVVGTWNQEEHIEWAKKNTARAYHLQDDGTQT
Sbjct: 294 GVGWWKYEFCYGKHVHQYHEDKDSGKTSVVVGTWNQEEHIEWAKKNTARAYHLQDDGTQT 353
Query: 408 VRMVSHFYGNGDICDITDKPRQVTVKLKCKESDSPHAVTVYMLEPHSCQYILGVESPVIC 467
VRMVSHFYGNGDICDITDKPRQVTVKLKCKESDSPHAVTVYMLEPHSCQYILGVESPVIC
Sbjct: 354 VRMVSHFYGNGDICDITDKPRQVTVKLKCKESDSPHAVTVYMLEPHSCQYILGVESPVIC 413
Query: 468 KILDTADENGLLSLPN 483
KILDTADENGLLSLPN
Sbjct: 414 KILDTADENGLLSLPN 429
Score = 54.3 bits (129), Expect = 2e-07
Identities = 36/145 (24%), Positives = 68/145 (46%), Gaps = 12/145 (8%)
Query: 333 QLIKEFLSGSYCFRGGVGWWKYEFCYGKHVHQYHEDKDSGKT---------SVVVGTWNQ 383
+L++ S C +W YE C+GKH+ QYHE+K++G+ +++
Sbjct: 102 ELLEPLFKQSSCSYRIESYWTYEVCHGKHIRQYHEEKETGQKINIHEYYLGNMLAKNLLF 161
Query: 384 EEHIEWAKKNTARAYHLQDDGTQTVRMVSHFYGNGDICDI-TDKPRQVTVKLKCKESDSP 442
E+ E +K + ++ Q GNG C + ++PR TV C +S
Sbjct: 162 EKEREAEEKEKSNEIPTKNIEGQMTPYYPVGMGNGTPCSLKQNRPRSSTVMYIC-HPESK 220
Query: 443 HAVTVYMLEPHSCQYILGVESPVIC 467
H + + + E +C+Y + + +P++C
Sbjct: 221 HEI-LSVAEVTTCEYEVVILTPLLC 244
Score = 52.4 bits (124), Expect = 9e-07
Identities = 33/127 (25%), Positives = 62/127 (48%), Gaps = 12/127 (9%)
Query: 120 YWTYEVCHGKHIRQYHEEKETGQKINIHEYYLGNMLAKNLLFEKEREAEEKEKSNEIPTK 179
+W YE C+GKH+ QYHE+K++G+ +++ E+ E +K + +
Sbjct: 297 WWKYEFCYGKHVHQYHEDKDSGKT---------SVVVGTWNQEEHIEWAKKNTARAYHLQ 347
Query: 180 NIEGQMTPYYPVGMGNGTPCSLKQNRPRSSTVMYIC-HPESKHEI-LSVAEVTTCEYEVV 237
+ Q GNG C + ++PR TV C +S H + + + E +C+Y +
Sbjct: 348 DDGTQTVRMVSHFYGNGDICDI-TDKPRQVTVKLKCKESDSPHAVTVYMLEPHSCQYILG 406
Query: 238 ILTPLLC 244
+ +P++C
Sbjct: 407 VESPVIC 413
>gi|63252870 osteosarcoma amplified 9 isoform 4 precursor [Homo
sapiens]
Length = 652
Score = 95.9 bits (237), Expect = 7e-20
Identities = 65/204 (31%), Positives = 99/204 (48%), Gaps = 24/204 (11%)
Query: 54 LPTTGVLYKEDNYVIMTTAHKEKYKCILPL----VTSGDEEEEKDYKGPNPRELLEPLFK 109
LP G + + VI+++ +K++Y+C LP EEE Y+GP ELL P+ +
Sbjct: 48 LPVMGGQSQSSDVVIVSSKYKQRYECRLPAGAIHFQREREEETPAYQGPGIPELLSPM-R 106
Query: 110 QSSCSYRIESYWTYEVCHGKHIRQYHEEKETGQKINIHEYYLGNMLAKNLLFEKEREAEE 169
+ C + + +WTYE C+G+HI+QYH E +I YLG + F+ + E +
Sbjct: 107 DAPCLLKTKDWWTYEFCYGRHIQQYHME---DSEIKGEVLYLGYYQS---AFDWDDETAK 160
Query: 170 KEKSNEIPTKNIEGQMTPYYPVGMGNGTPCSLKQNRPRSSTVMYICHPE---SKHEILSV 226
K + ++ Y+ GNG+ C L RPR + V ++C S I V
Sbjct: 161 ASKQH---------RLKRYHSQTYGNGSKCDL-NGRPREAEVRFLCDEGAGISGDYIDRV 210
Query: 227 AEVTTCEYEVVILTPLLCSHPKYR 250
E +C Y + I TP LC HP R
Sbjct: 211 DEPLSCSYVLTIRTPRLCPHPLLR 234
Score = 74.3 bits (181), Expect = 2e-13
Identities = 39/124 (31%), Positives = 60/124 (48%), Gaps = 19/124 (15%)
Query: 351 WWKYEFCYGKHVHQYHEDKDSGKTSVVVGTWNQ------EEHIEWAKKNTARAYHLQDDG 404
WW YEFCYG+H+ QYH + K V+ + Q +E + +K++ + YH
Sbjct: 117 WWTYEFCYGRHIQQYHMEDSEIKGEVLYLGYYQSAFDWDDETAKASKQHRLKRYH----- 171
Query: 405 TQTVRMVSHFYGNGDICDITDKPRQVTVKLKCKESDSPHAVTVYML-EPHSCQYILGVES 463
S YGNG CD+ +PR+ V+ C E + + EP SC Y+L + +
Sbjct: 172 -------SQTYGNGSKCDLNGRPREAEVRFLCDEGAGISGDYIDRVDEPLSCSYVLTIRT 224
Query: 464 PVIC 467
P +C
Sbjct: 225 PRLC 228
>gi|63252868 osteosarcoma amplified 9 isoform 3 precursor [Homo
sapiens]
Length = 597
Score = 95.9 bits (237), Expect = 7e-20
Identities = 65/204 (31%), Positives = 99/204 (48%), Gaps = 24/204 (11%)
Query: 54 LPTTGVLYKEDNYVIMTTAHKEKYKCILPL----VTSGDEEEEKDYKGPNPRELLEPLFK 109
LP G + + VI+++ +K++Y+C LP EEE Y+GP ELL P+ +
Sbjct: 48 LPVMGGQSQSSDVVIVSSKYKQRYECRLPAGAIHFQREREEETPAYQGPGIPELLSPM-R 106
Query: 110 QSSCSYRIESYWTYEVCHGKHIRQYHEEKETGQKINIHEYYLGNMLAKNLLFEKEREAEE 169
+ C + + +WTYE C+G+HI+QYH E +I YLG + F+ + E +
Sbjct: 107 DAPCLLKTKDWWTYEFCYGRHIQQYHME---DSEIKGEVLYLGYYQS---AFDWDDETAK 160
Query: 170 KEKSNEIPTKNIEGQMTPYYPVGMGNGTPCSLKQNRPRSSTVMYICHPE---SKHEILSV 226
K + ++ Y+ GNG+ C L RPR + V ++C S I V
Sbjct: 161 ASKQH---------RLKRYHSQTYGNGSKCDL-NGRPREAEVRFLCDEGAGISGDYIDRV 210
Query: 227 AEVTTCEYEVVILTPLLCSHPKYR 250
E +C Y + I TP LC HP R
Sbjct: 211 DEPLSCSYVLTIRTPRLCPHPLLR 234
Score = 74.3 bits (181), Expect = 2e-13
Identities = 39/124 (31%), Positives = 60/124 (48%), Gaps = 19/124 (15%)
Query: 351 WWKYEFCYGKHVHQYHEDKDSGKTSVVVGTWNQ------EEHIEWAKKNTARAYHLQDDG 404
WW YEFCYG+H+ QYH + K V+ + Q +E + +K++ + YH
Sbjct: 117 WWTYEFCYGRHIQQYHMEDSEIKGEVLYLGYYQSAFDWDDETAKASKQHRLKRYH----- 171
Query: 405 TQTVRMVSHFYGNGDICDITDKPRQVTVKLKCKESDSPHAVTVYML-EPHSCQYILGVES 463
S YGNG CD+ +PR+ V+ C E + + EP SC Y+L + +
Sbjct: 172 -------SQTYGNGSKCDLNGRPREAEVRFLCDEGAGISGDYIDRVDEPLSCSYVLTIRT 224
Query: 464 PVIC 467
P +C
Sbjct: 225 PRLC 228
>gi|63252866 osteosarcoma amplified 9 isoform 2 precursor [Homo
sapiens]
Length = 612
Score = 95.9 bits (237), Expect = 7e-20
Identities = 65/204 (31%), Positives = 99/204 (48%), Gaps = 24/204 (11%)
Query: 54 LPTTGVLYKEDNYVIMTTAHKEKYKCILPL----VTSGDEEEEKDYKGPNPRELLEPLFK 109
LP G + + VI+++ +K++Y+C LP EEE Y+GP ELL P+ +
Sbjct: 48 LPVMGGQSQSSDVVIVSSKYKQRYECRLPAGAIHFQREREEETPAYQGPGIPELLSPM-R 106
Query: 110 QSSCSYRIESYWTYEVCHGKHIRQYHEEKETGQKINIHEYYLGNMLAKNLLFEKEREAEE 169
+ C + + +WTYE C+G+HI+QYH E +I YLG + F+ + E +
Sbjct: 107 DAPCLLKTKDWWTYEFCYGRHIQQYHME---DSEIKGEVLYLGYYQS---AFDWDDETAK 160
Query: 170 KEKSNEIPTKNIEGQMTPYYPVGMGNGTPCSLKQNRPRSSTVMYICHPE---SKHEILSV 226
K + ++ Y+ GNG+ C L RPR + V ++C S I V
Sbjct: 161 ASKQH---------RLKRYHSQTYGNGSKCDL-NGRPREAEVRFLCDEGAGISGDYIDRV 210
Query: 227 AEVTTCEYEVVILTPLLCSHPKYR 250
E +C Y + I TP LC HP R
Sbjct: 211 DEPLSCSYVLTIRTPRLCPHPLLR 234
Score = 74.3 bits (181), Expect = 2e-13
Identities = 39/124 (31%), Positives = 60/124 (48%), Gaps = 19/124 (15%)
Query: 351 WWKYEFCYGKHVHQYHEDKDSGKTSVVVGTWNQ------EEHIEWAKKNTARAYHLQDDG 404
WW YEFCYG+H+ QYH + K V+ + Q +E + +K++ + YH
Sbjct: 117 WWTYEFCYGRHIQQYHMEDSEIKGEVLYLGYYQSAFDWDDETAKASKQHRLKRYH----- 171
Query: 405 TQTVRMVSHFYGNGDICDITDKPRQVTVKLKCKESDSPHAVTVYML-EPHSCQYILGVES 463
S YGNG CD+ +PR+ V+ C E + + EP SC Y+L + +
Sbjct: 172 -------SQTYGNGSKCDLNGRPREAEVRFLCDEGAGISGDYIDRVDEPLSCSYVLTIRT 224
Query: 464 PVIC 467
P +C
Sbjct: 225 PRLC 228
>gi|5803109 osteosarcoma amplified 9 isoform 1 precursor [Homo
sapiens]
Length = 667
Score = 95.9 bits (237), Expect = 7e-20
Identities = 65/204 (31%), Positives = 99/204 (48%), Gaps = 24/204 (11%)
Query: 54 LPTTGVLYKEDNYVIMTTAHKEKYKCILPL----VTSGDEEEEKDYKGPNPRELLEPLFK 109
LP G + + VI+++ +K++Y+C LP EEE Y+GP ELL P+ +
Sbjct: 48 LPVMGGQSQSSDVVIVSSKYKQRYECRLPAGAIHFQREREEETPAYQGPGIPELLSPM-R 106
Query: 110 QSSCSYRIESYWTYEVCHGKHIRQYHEEKETGQKINIHEYYLGNMLAKNLLFEKEREAEE 169
+ C + + +WTYE C+G+HI+QYH E +I YLG + F+ + E +
Sbjct: 107 DAPCLLKTKDWWTYEFCYGRHIQQYHME---DSEIKGEVLYLGYYQS---AFDWDDETAK 160
Query: 170 KEKSNEIPTKNIEGQMTPYYPVGMGNGTPCSLKQNRPRSSTVMYICHPE---SKHEILSV 226
K + ++ Y+ GNG+ C L RPR + V ++C S I V
Sbjct: 161 ASKQH---------RLKRYHSQTYGNGSKCDL-NGRPREAEVRFLCDEGAGISGDYIDRV 210
Query: 227 AEVTTCEYEVVILTPLLCSHPKYR 250
E +C Y + I TP LC HP R
Sbjct: 211 DEPLSCSYVLTIRTPRLCPHPLLR 234
Score = 74.3 bits (181), Expect = 2e-13
Identities = 39/124 (31%), Positives = 60/124 (48%), Gaps = 19/124 (15%)
Query: 351 WWKYEFCYGKHVHQYHEDKDSGKTSVVVGTWNQ------EEHIEWAKKNTARAYHLQDDG 404
WW YEFCYG+H+ QYH + K V+ + Q +E + +K++ + YH
Sbjct: 117 WWTYEFCYGRHIQQYHMEDSEIKGEVLYLGYYQSAFDWDDETAKASKQHRLKRYH----- 171
Query: 405 TQTVRMVSHFYGNGDICDITDKPRQVTVKLKCKESDSPHAVTVYML-EPHSCQYILGVES 463
S YGNG CD+ +PR+ V+ C E + + EP SC Y+L + +
Sbjct: 172 -------SQTYGNGSKCDLNGRPREAEVRFLCDEGAGISGDYIDRVDEPLSCSYVLTIRT 224
Query: 464 PVIC 467
P +C
Sbjct: 225 PRLC 228
>gi|14249738 N-acetylglucosamine-1-phosphotransferase, gamma subunit
[Homo sapiens]
Length = 305
Score = 43.1 bits (100), Expect = 6e-04
Identities = 36/129 (27%), Positives = 56/129 (43%), Gaps = 26/129 (20%)
Query: 339 LSGSYCFRGGVGWWKYEFCYGKHVHQYHEDKDSGKTSVVVGTWNQEEHIEWAKKNTARAY 398
LSG CF +KYEFC +V Q+ + S ++G W++ E NT
Sbjct: 67 LSGK-CFSLVESTYKYEFCPFHNVTQHEQTFRWNAYSGILGIWHEWE----IANNTFTGM 121
Query: 399 HLQDDGTQTVRMVSHFYGNGDICDITDKPRQVTVKLKCKESDSPHAVTVYMLEPHSCQYI 458
++D GD C + RQ V+L C +S+ ++ EP +C Y
Sbjct: 122 WMRD---------------GDAC--RSRSRQSKVELACGKSNR----LAHVSEPSTCVYA 160
Query: 459 LGVESPVIC 467
L E+P++C
Sbjct: 161 LTFETPLVC 169
Score = 30.4 bits (67), Expect = 3.7
Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 6/55 (10%)
Query: 193 MGNGTPCSLKQNRPRSSTVMYICHPESKHEILSVAEVTTCEYEVVILTPLLCSHP 247
M +G C ++R R S V C ++ + V+E +TC Y + TPL+C HP
Sbjct: 123 MRDGDAC---RSRSRQSKVELACGKSNR--LAHVSEPSTCVYALTFETPLVC-HP 171
>gi|226246554 hypothetical protein LOC643677 [Homo sapiens]
Length = 7081
Score = 34.7 bits (78), Expect = 0.20
Identities = 61/251 (24%), Positives = 98/251 (39%), Gaps = 37/251 (14%)
Query: 162 EKEREAEEKEKSNE-IPTKNIEGQMTPYYPVGMGNG-------TPCSLKQNRPR-SSTVM 212
+K + E+K K + +P+ N PY G SL Q+R + SS
Sbjct: 5055 QKRKIQEDKNKQVKGLPSINTSLLTPPYLKFDTTEGQENVIRIAKVSLPQSRSKESSDAG 5114
Query: 213 YICHPESKHEILS----------VAEVTTCEYEVVILTPLLCSHPKY-RFRASPVNDIFC 261
I PE+ H LS + + +V +T +L + Y + + SPV
Sbjct: 5115 RIACPEATHGELSSDVKQLKAHLLQKEEKDREKVADMTSVLDPNKMYLKAKKSPV----- 5169
Query: 262 QSLPGSPFKPLTLRQLEQQEEILRVPFRRNKEEDLQSTKEERFPAIHKSIAIGSQ----P 317
L F L + EQ+EE +V ++ + S R +H ++ G Q P
Sbjct: 5170 --LHTHSFSDLQWKTREQEEE--KVQKVKSGPGVMLSKSPSRSSPLHLNVNTGFQEESIP 5225
Query: 318 VLTVGTTHISKLTDDQLIKEFLSGSYCFRGGVGWWKYEFCYGKHVHQYHEDKDSGKTSVV 377
+LT + + KL + G C R G GKHV Q E+ D S++
Sbjct: 5226 ILTRPSFPLVKLQ----VSPDTEGGTCIRPIAGDILIYLQKGKHVSQNKEEDDVQIVSIL 5281
Query: 378 VGTWNQEEHIE 388
+ +QEE ++
Sbjct: 5282 IFPKHQEEKVQ 5292
>gi|239756039 PREDICTED: hypothetical protein LOC643677 [Homo sapiens]
Length = 6929
Score = 34.7 bits (78), Expect = 0.20
Identities = 61/251 (24%), Positives = 98/251 (39%), Gaps = 37/251 (14%)
Query: 162 EKEREAEEKEKSNE-IPTKNIEGQMTPYYPVGMGNG-------TPCSLKQNRPR-SSTVM 212
+K + E+K K + +P+ N PY G SL Q+R + SS
Sbjct: 4903 QKRKIQEDKNKQVKGLPSINTSLLTPPYLKFDTTEGQENVIRIAKVSLPQSRSKESSDAG 4962
Query: 213 YICHPESKHEILS----------VAEVTTCEYEVVILTPLLCSHPKY-RFRASPVNDIFC 261
I PE+ H LS + + +V +T +L + Y + + SPV
Sbjct: 4963 RIACPEATHGELSSDVKQLKAHLLQKEEKDREKVADMTSVLDPNKMYLKAKKSPV----- 5017
Query: 262 QSLPGSPFKPLTLRQLEQQEEILRVPFRRNKEEDLQSTKEERFPAIHKSIAIGSQ----P 317
L F L + EQ+EE +V ++ + S R +H ++ G Q P
Sbjct: 5018 --LHTHSFSDLQWKTREQEEE--KVQKVKSGPGVMLSKSPSRSSPLHLNVNTGFQEESIP 5073
Query: 318 VLTVGTTHISKLTDDQLIKEFLSGSYCFRGGVGWWKYEFCYGKHVHQYHEDKDSGKTSVV 377
+LT + + KL + G C R G GKHV Q E+ D S++
Sbjct: 5074 ILTRPSFPLVKLQ----VSPDTEGGTCIRPIAGDILIYLQKGKHVSQNKEEDDVQIVSIL 5129
Query: 378 VGTWNQEEHIE 388
+ +QEE ++
Sbjct: 5130 IFPKHQEEKVQ 5140
>gi|239750569 PREDICTED: hypothetical protein LOC643677 [Homo sapiens]
Length = 6929
Score = 34.7 bits (78), Expect = 0.20
Identities = 61/251 (24%), Positives = 98/251 (39%), Gaps = 37/251 (14%)
Query: 162 EKEREAEEKEKSNE-IPTKNIEGQMTPYYPVGMGNG-------TPCSLKQNRPR-SSTVM 212
+K + E+K K + +P+ N PY G SL Q+R + SS
Sbjct: 4903 QKRKIQEDKNKQVKGLPSINTSLLTPPYLKFDTTEGQENVIRIAKVSLPQSRSKESSDAG 4962
Query: 213 YICHPESKHEILS----------VAEVTTCEYEVVILTPLLCSHPKY-RFRASPVNDIFC 261
I PE+ H LS + + +V +T +L + Y + + SPV
Sbjct: 4963 RIACPEATHGELSSDVKQLKAHLLQKEEKDREKVADMTSVLDPNKMYLKAKKSPV----- 5017
Query: 262 QSLPGSPFKPLTLRQLEQQEEILRVPFRRNKEEDLQSTKEERFPAIHKSIAIGSQ----P 317
L F L + EQ+EE +V ++ + S R +H ++ G Q P
Sbjct: 5018 --LHTHSFSDLQWKTREQEEE--KVQKVKSGPGVMLSKSPSRSSPLHLNVNTGFQEESIP 5073
Query: 318 VLTVGTTHISKLTDDQLIKEFLSGSYCFRGGVGWWKYEFCYGKHVHQYHEDKDSGKTSVV 377
+LT + + KL + G C R G GKHV Q E+ D S++
Sbjct: 5074 ILTRPSFPLVKLQ----VSPDTEGGTCIRPIAGDILIYLQKGKHVSQNKEEDDVQIVSIL 5129
Query: 378 VGTWNQEEHIE 388
+ +QEE ++
Sbjct: 5130 IFPKHQEEKVQ 5140
>gi|239744870 PREDICTED: hypothetical protein LOC643677 [Homo sapiens]
Length = 6929
Score = 34.7 bits (78), Expect = 0.20
Identities = 61/251 (24%), Positives = 98/251 (39%), Gaps = 37/251 (14%)
Query: 162 EKEREAEEKEKSNE-IPTKNIEGQMTPYYPVGMGNG-------TPCSLKQNRPR-SSTVM 212
+K + E+K K + +P+ N PY G SL Q+R + SS
Sbjct: 4903 QKRKIQEDKNKQVKGLPSINTSLLTPPYLKFDTTEGQENVIRIAKVSLPQSRSKESSDAG 4962
Query: 213 YICHPESKHEILS----------VAEVTTCEYEVVILTPLLCSHPKY-RFRASPVNDIFC 261
I PE+ H LS + + +V +T +L + Y + + SPV
Sbjct: 4963 RIACPEATHGELSSDVKQLKAHLLQKEEKDREKVADMTSVLDPNKMYLKAKKSPV----- 5017
Query: 262 QSLPGSPFKPLTLRQLEQQEEILRVPFRRNKEEDLQSTKEERFPAIHKSIAIGSQ----P 317
L F L + EQ+EE +V ++ + S R +H ++ G Q P
Sbjct: 5018 --LHTHSFSDLQWKTREQEEE--KVQKVKSGPGVMLSKSPSRSSPLHLNVNTGFQEESIP 5073
Query: 318 VLTVGTTHISKLTDDQLIKEFLSGSYCFRGGVGWWKYEFCYGKHVHQYHEDKDSGKTSVV 377
+LT + + KL + G C R G GKHV Q E+ D S++
Sbjct: 5074 ILTRPSFPLVKLQ----VSPDTEGGTCIRPIAGDILIYLQKGKHVSQNKEEDDVQIVSIL 5129
Query: 378 VGTWNQEEHIE 388
+ +QEE ++
Sbjct: 5130 IFPKHQEEKVQ 5140
>gi|48255891 protein kinase C substrate 80K-H isoform 2 [Homo
sapiens]
Length = 525
Score = 33.5 bits (75), Expect = 0.44
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 4/52 (7%)
Query: 196 GTPCSLKQNRPRSSTVMYICHPESKHEILSVAEVTTCEYEVVILTPLLCSHP 247
GT C NR S+TV +C E+ + S E + CEY + ++TP C P
Sbjct: 465 GTGCWQGPNR--STTVRLLCGKETM--VTSTTEPSRCEYLMELMTPAACPEP 512
>gi|48255889 protein kinase C substrate 80K-H isoform 1 [Homo
sapiens]
Length = 528
Score = 33.5 bits (75), Expect = 0.44
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 4/52 (7%)
Query: 196 GTPCSLKQNRPRSSTVMYICHPESKHEILSVAEVTTCEYEVVILTPLLCSHP 247
GT C NR S+TV +C E+ + S E + CEY + ++TP C P
Sbjct: 468 GTGCWQGPNR--STTVRLLCGKETM--VTSTTEPSRCEYLMELMTPAACPEP 515
>gi|114431236 zinc finger protein 462 [Homo sapiens]
Length = 2506
Score = 32.7 bits (73), Expect = 0.75
Identities = 27/146 (18%), Positives = 59/146 (40%), Gaps = 8/146 (5%)
Query: 66 YVIMTTAHKEKYKCILPLVTSGDEEEEKDYKGPNPRELLEPL-FKQSSCSYRIESYWTYE 124
Y++ H Y+C+ + + E+ + + G + E + L F S YR + +Y
Sbjct: 875 YILDPNDHSAVYRCLECYIDYTNFEDLQQHYGEHHPEAMNVLNFDHSDLIYRCR-FCSYT 933
Query: 125 VCHGKHIRQYHEEKETGQKINIHEYYLGNMLAKNLLFEKEREAEEKEKSNEIPTKNIEGQ 184
+ + + +++ KIN M+ + + E++ + ++ +
Sbjct: 934 SPNVRSLMPHYQRMHPTVKIN------NAMIFSSYVVEQQEGLNTESQTLREILNSAPKN 987
Query: 185 MTPYYPVGMGNGTPCSLKQNRPRSST 210
M PV G G P + +N P++ T
Sbjct: 988 MATSTPVARGGGLPATFNKNTPKTFT 1013
>gi|14249340 phospholipase C, delta 4 [Homo sapiens]
Length = 762
Score = 32.0 bits (71), Expect = 1.3
Identities = 28/104 (26%), Positives = 49/104 (47%), Gaps = 7/104 (6%)
Query: 220 KHEILSVAEVT--TCEYEVVILTPLLCSHPKYRFRASPVNDIFCQSLPGSPFKPLTLRQL 277
K + +VA+ T +Y V++ CS + + A + +I + L + + QL
Sbjct: 361 KDVVATVAQYAFQTSDYPVILSLETHCSWEQQQTMARHLTEILGEQLLSTTLDGVLPTQL 420
Query: 278 EQQEEILRVPFRRNK----EEDLQSTKEERFPAIHKS-IAIGSQ 316
EE+ R + K EEDL+ +EE P + +S +A+ SQ
Sbjct: 421 PSPEELRRKILVKGKKLTLEEDLEYEEEEAEPELEESELALESQ 464
>gi|239753102 PREDICTED: hypothetical protein [Homo sapiens]
Length = 252
Score = 30.8 bits (68), Expect = 2.9
Identities = 21/52 (40%), Positives = 25/52 (48%), Gaps = 12/52 (23%)
Query: 3 EGGGGVRSLVPG----GPVLLVLC--------GLLEASGGGRALPQLSDDIP 42
E GGG R+L+PG GP +V LL GGRAL +L D P
Sbjct: 26 EAGGGERALLPGLGRRGPRRIVAAVGGGGRGAPLLPCGAGGRALDRLDDPSP 77
>gi|221136848 neuroblastoma breakpoint family, member 6 isoform 2
[Homo sapiens]
Length = 638
Score = 29.6 bits (65), Expect = 6.4
Identities = 25/93 (26%), Positives = 39/93 (41%), Gaps = 7/93 (7%)
Query: 88 DEEEEKDYKGPNPRELLEPLFKQSSCSYRIESYWTYEVCHGKHIRQYHEEKETGQKINIH 147
DEE EK + P PRE+ + K+ E T C H + KI
Sbjct: 178 DEEVEKVQESPAPREVQKTEEKEVPQDSLEECAVT---CSNSHNPSNSNQPHRSTKITFK 234
Query: 148 EYYLGNMLAKNLLFEKEREAEEKEKSNEIPTKN 180
E+ + + L+ E E +E+E++ IP +N
Sbjct: 235 EHEVDSA----LVVESEHPHDEEEEALNIPPEN 263
>gi|221136844 neuroblastoma breakpoint family, member 6 isoform 1
[Homo sapiens]
Length = 667
Score = 29.6 bits (65), Expect = 6.4
Identities = 25/93 (26%), Positives = 39/93 (41%), Gaps = 7/93 (7%)
Query: 88 DEEEEKDYKGPNPRELLEPLFKQSSCSYRIESYWTYEVCHGKHIRQYHEEKETGQKINIH 147
DEE EK + P PRE+ + K+ E T C H + KI
Sbjct: 178 DEEVEKVQESPAPREVQKTEEKEVPQDSLEECAVT---CSNSHNPSNSNQPHRSTKITFK 234
Query: 148 EYYLGNMLAKNLLFEKEREAEEKEKSNEIPTKN 180
E+ + + L+ E E +E+E++ IP +N
Sbjct: 235 EHEVDSA----LVVESEHPHDEEEEALNIPPEN 263
>gi|221218991 neuroblastoma breakpoint family, member 4 [Homo
sapiens]
Length = 638
Score = 29.6 bits (65), Expect = 6.4
Identities = 25/93 (26%), Positives = 39/93 (41%), Gaps = 7/93 (7%)
Query: 88 DEEEEKDYKGPNPRELLEPLFKQSSCSYRIESYWTYEVCHGKHIRQYHEEKETGQKINIH 147
DEE EK + P PRE+ + K+ E T C H + KI
Sbjct: 178 DEEVEKVQESPAPREVQKTEEKEVPQDSLEECAVT---CSNSHNPSNSNQPHRSTKITFK 234
Query: 148 EYYLGNMLAKNLLFEKEREAEEKEKSNEIPTKN 180
E+ + + L+ E E +E+E++ IP +N
Sbjct: 235 EHEVDSA----LVVESEHPHDEEEEALNIPPEN 263
>gi|48762732 phosphodiesterase 9A isoform h [Homo sapiens]
Length = 507
Score = 29.6 bits (65), Expect = 6.4
Identities = 13/37 (35%), Positives = 26/37 (70%), Gaps = 4/37 (10%)
Query: 253 ASPVNDIFC--QSLPGSPFK--PLTLRQLEQQEEILR 285
+S + D+FC LP +P+K P+ ++QL ++EE+++
Sbjct: 32 SSDIMDLFCIATGLPRTPYKVRPVAIKQLSEREELIQ 68
>gi|28395045 Bardet-Biedl syndrome 1 [Homo sapiens]
Length = 593
Score = 29.6 bits (65), Expect = 6.4
Identities = 24/77 (31%), Positives = 38/77 (49%), Gaps = 7/77 (9%)
Query: 271 PLTLRQL-----EQQEEILRVPFRRNKEEDLQSTKEERFPAIHKSIAIGSQPVLTVGTTH 325
PLTL+++ E EE L + R + L+ ++ E F HKS +I Q V+T TT
Sbjct: 149 PLTLKEMLESIRETAEEPLSIQSLRFLQ--LELSEMEAFVNQHKSNSIKRQTVITTMTTL 206
Query: 326 ISKLTDDQLIKEFLSGS 342
L D+ + + G+
Sbjct: 207 KKNLADEDAVSCLVLGT 223
>gi|18375528 UPF3 regulator of nonsense transcripts homolog B
isoform 1 [Homo sapiens]
Length = 483
Score = 29.6 bits (65), Expect = 6.4
Identities = 16/69 (23%), Positives = 34/69 (49%), Gaps = 4/69 (5%)
Query: 143 KINIHEYYLGNMLAKNLLFE----KEREAEEKEKSNEIPTKNIEGQMTPYYPVGMGNGTP 198
KI +H + L + KNLL + E+E +++EK+ ++ +N+ + + +
Sbjct: 267 KIKVHRFLLQAVNQKNLLKKPEKGDEKELDKREKAKKLDKENLSDERASGQSCTLPKRSD 326
Query: 199 CSLKQNRPR 207
LK +P+
Sbjct: 327 SELKDEKPK 335
>gi|16933557 dachsous 1 precursor [Homo sapiens]
Length = 3298
Score = 29.6 bits (65), Expect = 6.4
Identities = 25/99 (25%), Positives = 41/99 (41%), Gaps = 5/99 (5%)
Query: 256 VNDIFCQSLPGSPFKPLT--LRQLEQQEEILRVPFRRNKEEDLQSTKEERFPAIHKSIAI 313
V +F P LT L+QL + + R+ + + LQ+ E+ + + +
Sbjct: 1124 VGRVFATDRDSGPNGRLTYSLQQLSEDSKAFRIHPQTGEVTTLQTLDREQQSSYQLLVQV 1183
Query: 314 ---GSQPVLTVGTTHISKLTDDQLIKEFLSGSYCFRGGV 349
GS P T GT H++ L + FL S GG+
Sbjct: 1184 QDGGSPPRSTTGTVHVAVLDLNDNSPTFLQASGAAGGGL 1222
>gi|90903231 huntingtin [Homo sapiens]
Length = 3144
Score = 29.3 bits (64), Expect = 8.3
Identities = 17/56 (30%), Positives = 32/56 (57%), Gaps = 8/56 (14%)
Query: 125 VCHGKHIRQYHEEKETGQ------KINIHEYYLGNMLAKNLLFEKEREAEEKEKSN 174
+ H K + Q + E+E G +++IH +LGN + L E+E + EE+E+++
Sbjct: 2594 ISHEKLLLQINPERELGSMSYKLGQVSIHSVWLGNSITP--LREEEWDEEEEEEAD 2647
>gi|126090663 zinc finger homeodomain 4 [Homo sapiens]
Length = 3571
Score = 29.3 bits (64), Expect = 8.3
Identities = 24/91 (26%), Positives = 39/91 (42%), Gaps = 7/91 (7%)
Query: 265 PGSPFKPLTLRQLEQQ------EEILRVPFRRNKEEDLQSTKEERFPAIHKSIAIGSQPV 318
P P L+ +Q EQQ ++ ++ KEE+L++TK E+ P + I+ +
Sbjct: 3125 PPPPSSSLSGQQTEQQNKESEKKQTKPNKVKKIKEEELEATKPEKHPKKEEKISSALSVL 3184
Query: 319 -LTVGTTHISKLTDDQLIKEFLSGSYCFRGG 348
VG TH+ + L F GG
Sbjct: 3185 GKVVGETHVDPIQLQALQNAIAGDPASFIGG 3215
>gi|171460958 nucleolar protein 10 [Homo sapiens]
Length = 688
Score = 29.3 bits (64), Expect = 8.3
Identities = 25/114 (21%), Positives = 52/114 (45%), Gaps = 8/114 (7%)
Query: 32 RALPQLSDDIPFRVNWPGTEFSLPTTGVLYKEDNYVIMTTAHKEKYKC-ILPLVTSGDEE 90
++LP + D F+V + +F + ++ N ++ + K K K +L ++E
Sbjct: 474 KSLPNILTDDRFKVMFENPDFQVDEESEEFRLLNPLVSKISEKRKKKLRLLEQQELREKE 533
Query: 91 EEKDYKGPNPRELLEPLFKQSSCSYRIESYWTYEVCHGKHIRQYHEEKETGQKI 144
EE++ +G +P +SS S E W EV + + Q E+ + +++
Sbjct: 534 EEEEPEG-------KPSDAESSESSDDEKAWVEEVRKQRRLLQQEEKVKRQERL 580
>gi|116174778 centrosome spindle pole associated protein 1 isoform b
[Homo sapiens]
Length = 1221
Score = 29.3 bits (64), Expect = 8.3
Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 3/61 (4%)
Query: 136 EEKETGQKINIHEYYLGNMLAKNLLFEKEREAEEKEKSNEIPTKNIEGQMTPYYPVGMGN 195
E+K K ++ Y L + + +ER +E+E+ E K +E +M Y P G G
Sbjct: 584 EDKPKPSKQSLQSYQ--EALQQQIREREERRKKEREEKEEYEAK-LEAEMRTYNPWGKGG 640
Query: 196 G 196
G
Sbjct: 641 G 641
>gi|116174789 centrosome spindle pole associated protein 1 isoform a
[Homo sapiens]
Length = 1256
Score = 29.3 bits (64), Expect = 8.3
Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 3/61 (4%)
Query: 136 EEKETGQKINIHEYYLGNMLAKNLLFEKEREAEEKEKSNEIPTKNIEGQMTPYYPVGMGN 195
E+K K ++ Y L + + +ER +E+E+ E K +E +M Y P G G
Sbjct: 619 EDKPKPSKQSLQSYQ--EALQQQIREREERRKKEREEKEEYEAK-LEAEMRTYNPWGKGG 675
Query: 196 G 196
G
Sbjct: 676 G 676
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.135 0.415
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,633,731
Number of Sequences: 37866
Number of extensions: 1095501
Number of successful extensions: 3082
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 22
Number of HSP's that attempted gapping in prelim test: 3027
Number of HSP's gapped (non-prelim): 51
length of query: 483
length of database: 18,247,518
effective HSP length: 106
effective length of query: 377
effective length of database: 14,233,722
effective search space: 5366113194
effective search space used: 5366113194
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.